2024-07-10 09:13:46,235 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3)
2024-07-10 09:13:47,648 Running on GPU
2024-07-10 09:13:52,531 Found 6 citations for tools or databases
2024-07-10 09:13:52,531 Query 1/1: GBRB1_SRRM1 (length 1378)
2024-07-10 09:13:53,020 Sleeping for 9s. Reason: PENDING
2024-07-10 09:14:02,445 Sleeping for 8s. Reason: RUNNING
2024-07-10 09:14:10,867 Sleeping for 10s. Reason: RUNNING
2024-07-10 09:14:21,280 Sleeping for 10s. Reason: RUNNING
2024-07-10 09:14:31,703 Sleeping for 7s. Reason: RUNNING
2024-07-10 09:14:39,147 Sleeping for 7s. Reason: RUNNING
2024-07-10 09:14:46,596 Sleeping for 5s. Reason: RUNNING
2024-07-10 09:14:52,745 Sleeping for 10s. Reason: RUNNING
2024-07-10 09:15:03,375 Sleeping for 6s. Reason: RUNNING
2024-07-10 09:15:09,799 Sleeping for 6s. Reason: RUNNING
2024-07-10 09:15:16,213 Sleeping for 10s. Reason: RUNNING
2024-07-10 09:15:52,955 Sleeping for 5s. Reason: PENDING
2024-07-10 09:15:58,372 Sleeping for 10s. Reason: RUNNING
2024-07-10 09:16:08,786 Sleeping for 5s. Reason: RUNNING
2024-07-10 09:16:14,204 Sleeping for 7s. Reason: RUNNING
2024-07-10 09:16:21,661 Sleeping for 6s. Reason: RUNNING
2024-07-10 09:16:28,083 Sleeping for 9s. Reason: RUNNING
2024-07-10 09:16:37,506 Sleeping for 8s. Reason: RUNNING
2024-07-10 09:16:51,491 Setting max_seq=508, max_extra_seq=2048
2024-07-10 09:21:29,831 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=42.1 pTM=0.336 ipTM=0.177
2024-07-10 09:22:22,314 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=42.8 pTM=0.343 ipTM=0.174 tol=27.8
2024-07-10 09:23:14,933 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=42.7 pTM=0.344 ipTM=0.173 tol=16.5
2024-07-10 09:24:07,656 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=42.7 pTM=0.344 ipTM=0.176 tol=8.12
2024-07-10 09:25:00,386 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=42.8 pTM=0.344 ipTM=0.178 tol=5.71
2024-07-10 09:25:53,079 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=42.8 pTM=0.342 ipTM=0.181 tol=3.9
2024-07-10 09:26:45,775 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=42.8 pTM=0.342 ipTM=0.181 tol=3.37
2024-07-10 09:27:38,458 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=42.7 pTM=0.343 ipTM=0.182 tol=7.95
2024-07-10 09:28:31,130 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=42.7 pTM=0.342 ipTM=0.182 tol=7.31
2024-07-10 09:29:23,803 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=42.6 pTM=0.343 ipTM=0.183 tol=7.09
2024-07-10 09:30:16,468 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=42.8 pTM=0.343 ipTM=0.181 tol=6.45
2024-07-10 09:31:09,164 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=42.8 pTM=0.343 ipTM=0.181 tol=5.11
2024-07-10 09:32:01,853 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=42.8 pTM=0.343 ipTM=0.18 tol=9.34
2024-07-10 09:32:54,547 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=42.8 pTM=0.344 ipTM=0.183 tol=4.88
2024-07-10 09:33:47,244 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=42.8 pTM=0.342 ipTM=0.184 tol=3.51
2024-07-10 09:34:39,939 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=42.9 pTM=0.344 ipTM=0.182 tol=2.99
2024-07-10 09:35:32,625 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=42.8 pTM=0.344 ipTM=0.182 tol=11.2
2024-07-10 09:36:25,339 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=42.9 pTM=0.344 ipTM=0.186 tol=8.94
2024-07-10 09:37:18,038 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=42.8 pTM=0.344 ipTM=0.182 tol=10.1
2024-07-10 09:38:10,768 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=42.9 pTM=0.343 ipTM=0.183 tol=5.62
2024-07-10 09:39:03,475 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=42.7 pTM=0.344 ipTM=0.184 tol=4.56
2024-07-10 09:39:56,212 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=42.8 pTM=0.344 ipTM=0.186 tol=4.3
2024-07-10 09:40:48,940 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=42.7 pTM=0.343 ipTM=0.182 tol=6.64
2024-07-10 09:41:41,674 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=42.7 pTM=0.343 ipTM=0.185 tol=5.52
2024-07-10 09:42:34,398 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=42.7 pTM=0.343 ipTM=0.181 tol=11.7
2024-07-10 09:43:27,090 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=42.6 pTM=0.342 ipTM=0.183 tol=10.3
2024-07-10 09:44:19,766 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=42.6 pTM=0.343 ipTM=0.182 tol=7.17
2024-07-10 09:45:12,429 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=42.7 pTM=0.344 ipTM=0.187 tol=7.25
2024-07-10 09:46:05,107 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=42.6 pTM=0.342 ipTM=0.184 tol=6
2024-07-10 09:46:57,763 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=42.8 pTM=0.344 ipTM=0.186 tol=3.72
2024-07-10 09:47:50,447 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=42.8 pTM=0.344 ipTM=0.182 tol=3.31
2024-07-10 09:47:50,448 alphafold2_multimer_v3_model_1_seed_000 took 1837.6s (30 recycles)
2024-07-10 09:48:44,780 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=42.2 pTM=0.342 ipTM=0.176
2024-07-10 09:49:37,592 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=43.1 pTM=0.343 ipTM=0.175 tol=29.8
2024-07-10 09:50:30,390 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=43.3 pTM=0.342 ipTM=0.172 tol=13.7
2024-07-10 09:51:23,170 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=43.2 pTM=0.343 ipTM=0.175 tol=9.57
2024-07-10 09:52:15,934 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=43.3 pTM=0.343 ipTM=0.172 tol=6.24
2024-07-10 09:53:08,717 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=43.4 pTM=0.343 ipTM=0.175 tol=5.76
2024-07-10 09:54:01,502 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=43.4 pTM=0.344 ipTM=0.174 tol=5.66
2024-07-10 09:54:54,315 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=43.5 pTM=0.343 ipTM=0.175 tol=3.69
2024-07-10 09:55:47,139 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=43.4 pTM=0.344 ipTM=0.178 tol=3.89
2024-07-10 09:56:39,994 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=43.3 pTM=0.344 ipTM=0.177 tol=3.96
2024-07-10 09:57:32,850 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=43.2 pTM=0.342 ipTM=0.171 tol=5.47
2024-07-10 09:58:25,673 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=43.3 pTM=0.344 ipTM=0.172 tol=4.53
2024-07-10 09:59:18,511 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=43.4 pTM=0.342 ipTM=0.172 tol=4.09
2024-07-10 10:00:11,331 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=43.3 pTM=0.343 ipTM=0.176 tol=4.88
2024-07-10 10:01:04,169 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=43.4 pTM=0.343 ipTM=0.176 tol=4.89
2024-07-10 10:01:57,010 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=43.5 pTM=0.344 ipTM=0.175 tol=5.35
2024-07-10 10:02:49,815 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=43.5 pTM=0.343 ipTM=0.177 tol=4.65
2024-07-10 10:03:42,597 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=43.4 pTM=0.344 ipTM=0.179 tol=6.11
2024-07-10 10:04:35,373 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=43.5 pTM=0.345 ipTM=0.179 tol=5.57
2024-07-10 10:05:28,173 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=43.3 pTM=0.344 ipTM=0.178 tol=4.57
2024-07-10 10:06:20,976 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=43.3 pTM=0.343 ipTM=0.178 tol=3.78
2024-07-10 10:07:13,778 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=43.4 pTM=0.345 ipTM=0.179 tol=4.57
2024-07-10 10:08:06,591 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=43.2 pTM=0.344 ipTM=0.178 tol=4.76
2024-07-10 10:08:59,414 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=43.2 pTM=0.344 ipTM=0.178 tol=4.11
2024-07-10 10:09:52,239 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=43.5 pTM=0.343 ipTM=0.176 tol=4.33
2024-07-10 10:10:45,078 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=43.4 pTM=0.345 ipTM=0.177 tol=5.27
2024-07-10 10:11:37,908 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=43.6 pTM=0.344 ipTM=0.177 tol=4.64
2024-07-10 10:12:30,728 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=43.5 pTM=0.344 ipTM=0.181 tol=4.45
2024-07-10 10:13:23,524 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=43.4 pTM=0.344 ipTM=0.182 tol=4.12
2024-07-10 10:14:16,320 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=43.6 pTM=0.344 ipTM=0.18 tol=3.42
2024-07-10 10:15:09,119 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=43.6 pTM=0.344 ipTM=0.182 tol=4.01
2024-07-10 10:15:09,120 alphafold2_multimer_v3_model_2_seed_000 took 1637.0s (30 recycles)
2024-07-10 10:16:03,840 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=41.4 pTM=0.331 ipTM=0.167
2024-07-10 10:16:57,051 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=41 pTM=0.334 ipTM=0.164 tol=27.9
2024-07-10 10:17:50,256 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=41.1 pTM=0.334 ipTM=0.163 tol=20.1
2024-07-10 10:18:43,505 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=41.1 pTM=0.333 ipTM=0.165 tol=13.4
2024-07-10 10:19:36,743 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=41.1 pTM=0.334 ipTM=0.167 tol=10.5
2024-07-10 10:20:30,008 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=41.2 pTM=0.334 ipTM=0.169 tol=7.64
2024-07-10 10:21:23,278 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=41.2 pTM=0.335 ipTM=0.169 tol=12.2
2024-07-10 10:22:16,545 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=41.2 pTM=0.335 ipTM=0.168 tol=11.7
2024-07-10 10:23:09,837 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=41.1 pTM=0.336 ipTM=0.173 tol=5.86
2024-07-10 10:24:03,162 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=41.2 pTM=0.336 ipTM=0.179 tol=15.7
2024-07-10 10:24:56,501 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=41.1 pTM=0.335 ipTM=0.184 tol=8.64
2024-07-10 10:25:49,819 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=41.1 pTM=0.337 ipTM=0.184 tol=10.4
2024-07-10 10:26:43,137 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=41.2 pTM=0.336 ipTM=0.182 tol=13
2024-07-10 10:27:36,438 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=41.3 pTM=0.337 ipTM=0.186 tol=8.09
2024-07-10 10:28:29,756 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=41.3 pTM=0.337 ipTM=0.185 tol=7.89
2024-07-10 10:29:23,063 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=41.2 pTM=0.334 ipTM=0.167 tol=19.9
2024-07-10 10:30:16,371 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=41.1 pTM=0.335 ipTM=0.167 tol=20.8
2024-07-10 10:31:09,657 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=41 pTM=0.334 ipTM=0.17 tol=17.4
2024-07-10 10:32:02,928 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=41.2 pTM=0.336 ipTM=0.17 tol=5.58
2024-07-10 10:32:56,195 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=41.1 pTM=0.334 ipTM=0.169 tol=6
2024-07-10 10:33:49,447 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=41.1 pTM=0.336 ipTM=0.173 tol=5.08
2024-07-10 10:34:42,718 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=41.1 pTM=0.335 ipTM=0.171 tol=4.87
2024-07-10 10:35:35,980 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=41.1 pTM=0.336 ipTM=0.171 tol=4.4
2024-07-10 10:36:29,262 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=41.1 pTM=0.336 ipTM=0.179 tol=5.47
2024-07-10 10:37:22,544 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=41.2 pTM=0.336 ipTM=0.173 tol=16
2024-07-10 10:38:15,861 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=41 pTM=0.334 ipTM=0.169 tol=15.5
2024-07-10 10:39:09,157 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=41.1 pTM=0.335 ipTM=0.178 tol=7.39
2024-07-10 10:40:02,437 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=41.1 pTM=0.335 ipTM=0.19 tol=5.61
2024-07-10 10:40:55,716 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=41.2 pTM=0.337 ipTM=0.2 tol=4.82
2024-07-10 10:41:49,006 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=41.2 pTM=0.336 ipTM=0.194 tol=11.7
2024-07-10 10:42:42,298 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=41.2 pTM=0.336 ipTM=0.185 tol=11
2024-07-10 10:42:42,300 alphafold2_multimer_v3_model_3_seed_000 took 1651.5s (30 recycles)
2024-07-10 10:43:36,949 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=38.8 pTM=0.321 ipTM=0.161
2024-07-10 10:44:30,083 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=40.1 pTM=0.328 ipTM=0.168 tol=22
2024-07-10 10:45:23,243 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=40.2 pTM=0.328 ipTM=0.167 tol=13.2
2024-07-10 10:46:16,432 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=40.3 pTM=0.33 ipTM=0.169 tol=16.3
2024-07-10 10:47:09,601 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=40.4 pTM=0.331 ipTM=0.172 tol=10.5
2024-07-10 10:48:02,767 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=40.3 pTM=0.332 ipTM=0.175 tol=8.05
2024-07-10 10:48:55,953 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=40.3 pTM=0.332 ipTM=0.176 tol=9.01
2024-07-10 10:49:49,141 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=40.4 pTM=0.332 ipTM=0.177 tol=11.5
2024-07-10 10:50:42,340 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=40.4 pTM=0.333 ipTM=0.179 tol=10.2
2024-07-10 10:51:35,543 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=40.3 pTM=0.332 ipTM=0.179 tol=10.3
2024-07-10 10:52:28,736 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=40.4 pTM=0.331 ipTM=0.175 tol=8.43
2024-07-10 10:53:21,960 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=40.5 pTM=0.332 ipTM=0.176 tol=8.06
2024-07-10 10:54:15,176 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=40.6 pTM=0.332 ipTM=0.176 tol=8.68
2024-07-10 10:55:08,391 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=40.5 pTM=0.332 ipTM=0.177 tol=7.26
2024-07-10 10:56:01,592 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=40.3 pTM=0.332 ipTM=0.177 tol=15
2024-07-10 10:56:54,792 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=40.5 pTM=0.333 ipTM=0.177 tol=12.7
2024-07-10 10:57:47,988 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=40.5 pTM=0.332 ipTM=0.177 tol=8.97
2024-07-10 10:58:41,180 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=40.4 pTM=0.332 ipTM=0.178 tol=8.41
2024-07-10 10:59:34,377 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=40.2 pTM=0.333 ipTM=0.18 tol=7.52
2024-07-10 11:00:27,576 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=40.3 pTM=0.332 ipTM=0.178 tol=6.02
2024-07-10 11:01:20,780 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=40.2 pTM=0.332 ipTM=0.179 tol=5.42
2024-07-10 11:02:13,999 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=40.2 pTM=0.332 ipTM=0.179 tol=6.97
2024-07-10 11:03:07,232 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=40.2 pTM=0.332 ipTM=0.178 tol=5.32
2024-07-10 11:04:00,476 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=40.3 pTM=0.333 ipTM=0.177 tol=4.89
2024-07-10 11:04:53,683 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=40.3 pTM=0.332 ipTM=0.174 tol=3.91
2024-07-10 11:05:46,882 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=40.3 pTM=0.332 ipTM=0.175 tol=4.46
2024-07-10 11:06:40,087 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=40.4 pTM=0.332 ipTM=0.177 tol=5.2
2024-07-10 11:07:33,287 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=40.4 pTM=0.332 ipTM=0.178 tol=3.89
2024-07-10 11:08:26,478 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=40.4 pTM=0.332 ipTM=0.179 tol=5.56
2024-07-10 11:09:19,671 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=40.4 pTM=0.331 ipTM=0.176 tol=4.79
2024-07-10 11:10:12,858 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=40.3 pTM=0.332 ipTM=0.181 tol=4.59
2024-07-10 11:10:12,859 alphafold2_multimer_v3_model_4_seed_000 took 1648.9s (30 recycles)
2024-07-10 11:11:07,865 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=40.8 pTM=0.326 ipTM=0.156
2024-07-10 11:12:01,334 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=41.2 pTM=0.33 ipTM=0.153 tol=24.4
2024-07-10 11:12:54,742 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=41.6 pTM=0.332 ipTM=0.161 tol=19.2
2024-07-10 11:13:48,196 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=41.6 pTM=0.332 ipTM=0.162 tol=8.67
2024-07-10 11:14:41,601 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=41.6 pTM=0.332 ipTM=0.164 tol=9.93
2024-07-10 11:15:35,007 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=41.7 pTM=0.332 ipTM=0.165 tol=12.9
2024-07-10 11:16:28,452 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=41.7 pTM=0.333 ipTM=0.165 tol=8.65
2024-07-10 11:17:21,865 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=41.6 pTM=0.332 ipTM=0.165 tol=13
2024-07-10 11:18:15,326 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=41.6 pTM=0.333 ipTM=0.167 tol=9.51
2024-07-10 11:19:08,760 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=41.5 pTM=0.333 ipTM=0.169 tol=11.3
2024-07-10 11:20:02,193 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=41.6 pTM=0.333 ipTM=0.168 tol=6.04
2024-07-10 11:20:55,610 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=41.5 pTM=0.333 ipTM=0.166 tol=9.02
2024-07-10 11:21:49,035 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=41.7 pTM=0.333 ipTM=0.166 tol=11.9
2024-07-10 11:22:42,480 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=41.5 pTM=0.333 ipTM=0.168 tol=13.1
2024-07-10 11:23:35,887 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=41.7 pTM=0.333 ipTM=0.166 tol=8.11
2024-07-10 11:24:29,300 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=41.7 pTM=0.332 ipTM=0.164 tol=7.16
2024-07-10 11:25:22,714 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=41.6 pTM=0.332 ipTM=0.166 tol=5.23
2024-07-10 11:26:16,124 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=41.5 pTM=0.333 ipTM=0.167 tol=4.95
2024-07-10 11:27:09,534 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=41.5 pTM=0.332 ipTM=0.167 tol=3.79
2024-07-10 11:28:02,911 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=41.5 pTM=0.331 ipTM=0.166 tol=9.98
2024-07-10 11:28:56,301 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=41.4 pTM=0.331 ipTM=0.167 tol=10.7
2024-07-10 11:29:49,734 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=41.4 pTM=0.331 ipTM=0.168 tol=7.86
2024-07-10 11:30:43,156 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=41.3 pTM=0.33 ipTM=0.168 tol=11.1
2024-07-10 11:31:36,583 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=41.4 pTM=0.329 ipTM=0.168 tol=10.3
2024-07-10 11:32:30,020 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=41.5 pTM=0.331 ipTM=0.165 tol=10.6
2024-07-10 11:33:23,460 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=41.4 pTM=0.329 ipTM=0.163 tol=11.5
2024-07-10 11:34:16,890 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=41.5 pTM=0.331 ipTM=0.165 tol=10.6
2024-07-10 11:35:10,300 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=41.4 pTM=0.329 ipTM=0.164 tol=11.8
2024-07-10 11:36:03,731 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=41.4 pTM=0.33 ipTM=0.164 tol=8.67
2024-07-10 11:36:57,162 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=41.5 pTM=0.33 ipTM=0.162 tol=4.69
2024-07-10 11:37:50,604 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=41.6 pTM=0.33 ipTM=0.162 tol=9.09
2024-07-10 11:37:50,605 alphafold2_multimer_v3_model_5_seed_000 took 1656.1s (30 recycles)
2024-07-10 11:37:52,252 reranking models by 'multimer' metric
2024-07-10 11:37:56,806 Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
2024-07-10 11:41:02,680 Relaxation took 190.4s
2024-07-10 11:41:02,680 rank_001_alphafold2_multimer_v3_model_3_seed_000 pLDDT=41.2 pTM=0.336 ipTM=0.185
2024-07-10 11:44:01,052 Relaxation took 178.4s
2024-07-10 11:44:01,052 rank_002_alphafold2_multimer_v3_model_1_seed_000 pLDDT=42.8 pTM=0.344 ipTM=0.182
2024-07-10 11:47:56,204 Relaxation took 235.2s
2024-07-10 11:47:56,204 rank_003_alphafold2_multimer_v3_model_2_seed_000 pLDDT=43.6 pTM=0.344 ipTM=0.182
2024-07-10 11:52:44,136 Relaxation took 287.9s
2024-07-10 11:52:44,137 rank_004_alphafold2_multimer_v3_model_4_seed_000 pLDDT=40.3 pTM=0.332 ipTM=0.181
2024-07-10 11:59:09,910 Relaxation took 385.8s
2024-07-10 11:59:09,910 rank_005_alphafold2_multimer_v3_model_5_seed_000 pLDDT=41.6 pTM=0.33 ipTM=0.162
2024-07-10 11:59:13,396 Done