2024-07-10 09:14:07,635 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3)
2024-07-10 09:14:07,939 Running on GPU
2024-07-10 09:14:08,791 Found 6 citations for tools or databases
2024-07-10 09:14:08,791 Query 1/1: GBX1_SYT9 (length 854)
2024-07-10 09:14:09,672 Sleeping for 10s. Reason: PENDING
2024-07-10 09:14:20,090 Sleeping for 9s. Reason: RUNNING
2024-07-10 09:14:29,809 Sleeping for 10s. Reason: RUNNING
2024-07-10 09:14:40,233 Sleeping for 6s. Reason: RUNNING
2024-07-10 09:14:46,649 Sleeping for 6s. Reason: RUNNING
2024-07-10 09:14:53,211 Sleeping for 10s. Reason: RUNNING
2024-07-10 09:15:03,641 Sleeping for 9s. Reason: RUNNING
2024-07-10 09:15:13,244 Sleeping for 8s. Reason: RUNNING
2024-07-10 09:15:21,841 Sleeping for 10s. Reason: RUNNING
2024-07-10 09:15:32,498 Sleeping for 7s. Reason: RUNNING
2024-07-10 09:15:39,909 Sleeping for 6s. Reason: RUNNING
2024-07-10 09:15:46,338 Sleeping for 7s. Reason: RUNNING
2024-07-10 09:15:53,762 Sleeping for 6s. Reason: RUNNING
2024-07-10 09:16:00,365 Sleeping for 10s. Reason: RUNNING
2024-07-10 09:16:11,333 Sleeping for 5s. Reason: RUNNING
2024-07-10 09:16:16,761 Sleeping for 6s. Reason: RUNNING
2024-07-10 09:16:48,103 Sleeping for 6s. Reason: PENDING
2024-07-10 09:16:54,750 Sleeping for 7s. Reason: RUNNING
2024-07-10 09:17:02,181 Sleeping for 6s. Reason: RUNNING
2024-07-10 09:17:08,596 Sleeping for 8s. Reason: RUNNING
2024-07-10 09:17:17,006 Sleeping for 8s. Reason: RUNNING
2024-07-10 09:17:25,446 Sleeping for 9s. Reason: RUNNING
2024-07-10 09:17:34,871 Sleeping for 7s. Reason: RUNNING
2024-07-10 09:17:42,289 Sleeping for 7s. Reason: RUNNING
2024-07-10 09:17:53,864 Setting max_seq=508, max_extra_seq=2048
2024-07-10 09:20:34,354 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=49.8 pTM=0.283 ipTM=0.148
2024-07-10 09:20:49,624 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=48.8 pTM=0.279 ipTM=0.155 tol=14.6
2024-07-10 09:21:04,953 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=48.6 pTM=0.273 ipTM=0.136 tol=10.3
2024-07-10 09:21:20,306 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=48.2 pTM=0.279 ipTM=0.141 tol=7.57
2024-07-10 09:21:35,691 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=48.5 pTM=0.277 ipTM=0.141 tol=6.42
2024-07-10 09:21:51,090 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=48.8 pTM=0.276 ipTM=0.139 tol=6.15
2024-07-10 09:22:06,518 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=48.8 pTM=0.276 ipTM=0.138 tol=5.69
2024-07-10 09:22:21,958 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=49 pTM=0.273 ipTM=0.139 tol=3.78
2024-07-10 09:22:37,402 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=48.9 pTM=0.273 ipTM=0.143 tol=3.46
2024-07-10 09:22:52,857 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=49.1 pTM=0.273 ipTM=0.143 tol=3.93
2024-07-10 09:23:08,322 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=48.9 pTM=0.273 ipTM=0.142 tol=4
2024-07-10 09:23:23,792 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=48.9 pTM=0.274 ipTM=0.145 tol=5.39
2024-07-10 09:23:39,267 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=49.1 pTM=0.274 ipTM=0.148 tol=3.45
2024-07-10 09:23:54,734 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=48.9 pTM=0.275 ipTM=0.148 tol=2.74
2024-07-10 09:24:10,207 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=49.1 pTM=0.272 ipTM=0.144 tol=6.09
2024-07-10 09:24:25,682 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=49.2 pTM=0.273 ipTM=0.144 tol=5.34
2024-07-10 09:24:41,161 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=48.7 pTM=0.275 ipTM=0.143 tol=3.35
2024-07-10 09:24:56,636 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=48.5 pTM=0.275 ipTM=0.142 tol=5.04
2024-07-10 09:25:12,116 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=48.6 pTM=0.273 ipTM=0.138 tol=4.91
2024-07-10 09:25:27,590 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=48.7 pTM=0.272 ipTM=0.141 tol=4.51
2024-07-10 09:25:43,065 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=48.5 pTM=0.277 ipTM=0.144 tol=3.57
2024-07-10 09:25:58,544 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=48.5 pTM=0.277 ipTM=0.144 tol=5.92
2024-07-10 09:26:14,025 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=48.9 pTM=0.278 ipTM=0.143 tol=4.36
2024-07-10 09:26:29,510 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=49.4 pTM=0.275 ipTM=0.143 tol=6.01
2024-07-10 09:26:44,989 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=49 pTM=0.274 ipTM=0.14 tol=3.78
2024-07-10 09:27:00,462 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=49.2 pTM=0.272 ipTM=0.137 tol=2.74
2024-07-10 09:27:15,935 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=48.7 pTM=0.272 ipTM=0.141 tol=2.56
2024-07-10 09:27:31,399 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=49 pTM=0.271 ipTM=0.136 tol=3.67
2024-07-10 09:27:46,864 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=48.4 pTM=0.275 ipTM=0.145 tol=7.21
2024-07-10 09:28:02,323 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=48.8 pTM=0.276 ipTM=0.143 tol=3.96
2024-07-10 09:28:17,787 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=48.6 pTM=0.277 ipTM=0.141 tol=6.11
2024-07-10 09:28:17,788 alphafold2_multimer_v3_model_1_seed_000 took 619.0s (30 recycles)
2024-07-10 09:28:33,707 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=48.5 pTM=0.277 ipTM=0.141
2024-07-10 09:28:49,209 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=48.9 pTM=0.276 ipTM=0.134 tol=18.3
2024-07-10 09:29:04,718 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=49 pTM=0.276 ipTM=0.138 tol=13.2
2024-07-10 09:29:20,221 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=49.3 pTM=0.28 ipTM=0.144 tol=10.7
2024-07-10 09:29:35,742 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=49.3 pTM=0.278 ipTM=0.142 tol=9.09
2024-07-10 09:29:51,264 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=49.6 pTM=0.28 ipTM=0.15 tol=9.4
2024-07-10 09:30:06,789 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=49.7 pTM=0.28 ipTM=0.144 tol=7.5
2024-07-10 09:30:22,304 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=49.9 pTM=0.282 ipTM=0.154 tol=4.59
2024-07-10 09:30:37,838 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=49.8 pTM=0.282 ipTM=0.148 tol=4.61
2024-07-10 09:30:53,377 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=50.1 pTM=0.283 ipTM=0.153 tol=3.94
2024-07-10 09:31:08,911 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=49.9 pTM=0.28 ipTM=0.149 tol=3.89
2024-07-10 09:31:24,450 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=50.2 pTM=0.284 ipTM=0.155 tol=4.63
2024-07-10 09:31:39,993 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=50.1 pTM=0.286 ipTM=0.158 tol=5.91
2024-07-10 09:31:55,541 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=50.2 pTM=0.287 ipTM=0.159 tol=4.12
2024-07-10 09:32:11,087 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=50.2 pTM=0.285 ipTM=0.156 tol=3.87
2024-07-10 09:32:26,638 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=50.4 pTM=0.287 ipTM=0.157 tol=3.6
2024-07-10 09:32:42,192 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=50 pTM=0.283 ipTM=0.152 tol=5.14
2024-07-10 09:32:57,755 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=50.2 pTM=0.288 ipTM=0.159 tol=4.26
2024-07-10 09:33:13,325 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=49.9 pTM=0.287 ipTM=0.158 tol=3.76
2024-07-10 09:33:28,903 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=50 pTM=0.286 ipTM=0.156 tol=4.45
2024-07-10 09:33:44,472 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=49.9 pTM=0.286 ipTM=0.156 tol=3.84
2024-07-10 09:34:00,035 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=50.2 pTM=0.289 ipTM=0.162 tol=4.08
2024-07-10 09:34:15,595 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=50.2 pTM=0.288 ipTM=0.16 tol=2.88
2024-07-10 09:34:31,150 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=50.4 pTM=0.286 ipTM=0.155 tol=3.49
2024-07-10 09:34:46,707 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=50.1 pTM=0.286 ipTM=0.156 tol=3.95
2024-07-10 09:35:02,260 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=50.3 pTM=0.288 ipTM=0.159 tol=3.31
2024-07-10 09:35:17,805 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=50.1 pTM=0.284 ipTM=0.154 tol=2.59
2024-07-10 09:35:33,341 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=50.3 pTM=0.287 ipTM=0.159 tol=3.07
2024-07-10 09:35:48,880 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=50.2 pTM=0.286 ipTM=0.157 tol=2.75
2024-07-10 09:36:04,412 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=50.4 pTM=0.286 ipTM=0.157 tol=2.34
2024-07-10 09:36:19,944 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=50.2 pTM=0.286 ipTM=0.156 tol=2.26
2024-07-10 09:36:19,944 alphafold2_multimer_v3_model_2_seed_000 took 481.7s (30 recycles)
2024-07-10 09:36:35,966 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=48.5 pTM=0.279 ipTM=0.144
2024-07-10 09:36:51,565 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=48.1 pTM=0.284 ipTM=0.144 tol=26.3
2024-07-10 09:37:07,179 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=48.1 pTM=0.292 ipTM=0.153 tol=18.2
2024-07-10 09:37:22,793 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=48.5 pTM=0.3 ipTM=0.159 tol=8.62
2024-07-10 09:37:38,392 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=48.6 pTM=0.303 ipTM=0.168 tol=9.13
2024-07-10 09:37:53,993 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=48.5 pTM=0.305 ipTM=0.168 tol=7.62
2024-07-10 09:38:09,580 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=48.7 pTM=0.305 ipTM=0.17 tol=3.29
2024-07-10 09:38:25,171 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=48.6 pTM=0.306 ipTM=0.17 tol=6.11
2024-07-10 09:38:40,765 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=48.5 pTM=0.31 ipTM=0.183 tol=6.32
2024-07-10 09:38:56,346 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=48.3 pTM=0.308 ipTM=0.175 tol=2.74
2024-07-10 09:39:11,940 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=48.3 pTM=0.311 ipTM=0.183 tol=2.57
2024-07-10 09:39:27,528 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=47.9 pTM=0.308 ipTM=0.176 tol=2.54
2024-07-10 09:39:43,132 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=48.1 pTM=0.309 ipTM=0.179 tol=2.04
2024-07-10 09:39:58,724 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=47.9 pTM=0.307 ipTM=0.177 tol=2.24
2024-07-10 09:40:14,300 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=48 pTM=0.309 ipTM=0.178 tol=1.97
2024-07-10 09:40:29,895 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=48.1 pTM=0.307 ipTM=0.174 tol=1.99
2024-07-10 09:40:45,487 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=48.3 pTM=0.309 ipTM=0.176 tol=1.51
2024-07-10 09:41:01,078 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=48 pTM=0.305 ipTM=0.172 tol=4.95
2024-07-10 09:41:16,682 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=48.2 pTM=0.308 ipTM=0.176 tol=5.38
2024-07-10 09:41:32,290 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=48.1 pTM=0.302 ipTM=0.166 tol=2.29
2024-07-10 09:41:47,890 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=48.2 pTM=0.308 ipTM=0.174 tol=2.45
2024-07-10 09:42:03,490 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=48.2 pTM=0.304 ipTM=0.172 tol=2.07
2024-07-10 09:42:19,083 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=48.3 pTM=0.308 ipTM=0.176 tol=2.16
2024-07-10 09:42:34,667 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=48.4 pTM=0.306 ipTM=0.176 tol=3.23
2024-07-10 09:42:50,259 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=48.6 pTM=0.309 ipTM=0.181 tol=2.55
2024-07-10 09:43:05,835 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=48.6 pTM=0.303 ipTM=0.172 tol=1.73
2024-07-10 09:43:21,428 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=48.7 pTM=0.306 ipTM=0.182 tol=2.61
2024-07-10 09:43:37,017 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=48.7 pTM=0.301 ipTM=0.166 tol=2.79
2024-07-10 09:43:52,603 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=48.8 pTM=0.311 ipTM=0.187 tol=2.84
2024-07-10 09:44:08,168 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=48.7 pTM=0.305 ipTM=0.175 tol=5.12
2024-07-10 09:44:23,748 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=48.7 pTM=0.311 ipTM=0.181 tol=3.87
2024-07-10 09:44:23,749 alphafold2_multimer_v3_model_3_seed_000 took 483.3s (30 recycles)
2024-07-10 09:44:39,825 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=47.3 pTM=0.273 ipTM=0.142
2024-07-10 09:44:55,407 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=47.1 pTM=0.294 ipTM=0.157 tol=26.2
2024-07-10 09:45:10,971 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=46.7 pTM=0.301 ipTM=0.204 tol=10.8
2024-07-10 09:45:26,576 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=47.3 pTM=0.286 ipTM=0.161 tol=9.71
2024-07-10 09:45:42,189 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=47.1 pTM=0.284 ipTM=0.135 tol=8.24
2024-07-10 09:45:57,789 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=47.6 pTM=0.318 ipTM=0.141 tol=7.62
2024-07-10 09:46:13,387 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=47.5 pTM=0.298 ipTM=0.157 tol=6.58
2024-07-10 09:46:28,977 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=47.9 pTM=0.325 ipTM=0.154 tol=3.73
2024-07-10 09:46:44,563 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=47.5 pTM=0.298 ipTM=0.155 tol=4.65
2024-07-10 09:47:00,142 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=48 pTM=0.333 ipTM=0.154 tol=3.58
2024-07-10 09:47:15,712 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=47.4 pTM=0.309 ipTM=0.164 tol=4.03
2024-07-10 09:47:31,285 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=48.1 pTM=0.334 ipTM=0.144 tol=3.41
2024-07-10 09:47:46,860 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=47.9 pTM=0.307 ipTM=0.149 tol=2.38
2024-07-10 09:48:02,435 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=47.9 pTM=0.33 ipTM=0.153 tol=4.98
2024-07-10 09:48:18,010 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=47.9 pTM=0.306 ipTM=0.153 tol=4.16
2024-07-10 09:48:33,577 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=48 pTM=0.331 ipTM=0.149 tol=4.95
2024-07-10 09:48:49,158 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=47.6 pTM=0.303 ipTM=0.149 tol=3.59
2024-07-10 09:49:04,725 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=48.1 pTM=0.337 ipTM=0.163 tol=3.66
2024-07-10 09:49:20,307 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=47.4 pTM=0.303 ipTM=0.151 tol=4.45
2024-07-10 09:49:35,864 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=47.8 pTM=0.342 ipTM=0.168 tol=4.58
2024-07-10 09:49:51,442 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=47.2 pTM=0.307 ipTM=0.153 tol=4.68
2024-07-10 09:50:07,018 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=47.5 pTM=0.337 ipTM=0.143 tol=5.61
2024-07-10 09:50:22,596 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=47.2 pTM=0.306 ipTM=0.151 tol=4.45
2024-07-10 09:50:38,165 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=47.8 pTM=0.342 ipTM=0.161 tol=5.41
2024-07-10 09:50:53,739 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=47.5 pTM=0.313 ipTM=0.157 tol=4.46
2024-07-10 09:51:09,305 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=47.6 pTM=0.334 ipTM=0.151 tol=4.15
2024-07-10 09:51:24,882 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=47.1 pTM=0.303 ipTM=0.154 tol=2.72
2024-07-10 09:51:40,449 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=47.8 pTM=0.336 ipTM=0.147 tol=3.51
2024-07-10 09:51:56,032 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=47.2 pTM=0.314 ipTM=0.156 tol=3.72
2024-07-10 09:52:11,571 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=46.8 pTM=0.37 ipTM=0.264 tol=11.3
2024-07-10 09:52:27,160 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=47.5 pTM=0.315 ipTM=0.151 tol=8.88
2024-07-10 09:52:27,161 alphafold2_multimer_v3_model_4_seed_000 took 482.9s (30 recycles)
2024-07-10 09:52:43,222 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=48.2 pTM=0.274 ipTM=0.159
2024-07-10 09:52:58,836 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=47.8 pTM=0.281 ipTM=0.13 tol=21.7
2024-07-10 09:53:14,442 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=48.1 pTM=0.283 ipTM=0.152 tol=9.45
2024-07-10 09:53:30,044 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=48.6 pTM=0.288 ipTM=0.146 tol=10.2
2024-07-10 09:53:45,632 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=48.8 pTM=0.299 ipTM=0.171 tol=5.56
2024-07-10 09:54:01,241 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=48.5 pTM=0.299 ipTM=0.169 tol=5.95
2024-07-10 09:54:16,847 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=48.8 pTM=0.304 ipTM=0.179 tol=9.74
2024-07-10 09:54:32,433 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=48.6 pTM=0.307 ipTM=0.185 tol=8.24
2024-07-10 09:54:48,027 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=48.9 pTM=0.306 ipTM=0.183 tol=10.5
2024-07-10 09:55:03,633 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=48.6 pTM=0.305 ipTM=0.184 tol=7.46
2024-07-10 09:55:19,228 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=48.9 pTM=0.308 ipTM=0.188 tol=9.38
2024-07-10 09:55:34,826 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=48.6 pTM=0.304 ipTM=0.181 tol=11.1
2024-07-10 09:55:50,424 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=49.1 pTM=0.307 ipTM=0.184 tol=6.89
2024-07-10 09:56:06,032 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=48.4 pTM=0.304 ipTM=0.183 tol=9.08
2024-07-10 09:56:21,632 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=48.9 pTM=0.303 ipTM=0.176 tol=9.5
2024-07-10 09:56:37,228 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=48.7 pTM=0.303 ipTM=0.184 tol=9.35
2024-07-10 09:56:52,820 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=48.8 pTM=0.302 ipTM=0.174 tol=5.81
2024-07-10 09:57:08,412 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=48.3 pTM=0.304 ipTM=0.187 tol=6.53
2024-07-10 09:57:24,015 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=48.5 pTM=0.302 ipTM=0.176 tol=8.57
2024-07-10 09:57:39,606 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=48.5 pTM=0.303 ipTM=0.207 tol=6.41
2024-07-10 09:57:55,196 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=48.6 pTM=0.305 ipTM=0.181 tol=3.79
2024-07-10 09:58:10,784 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=48.5 pTM=0.304 ipTM=0.184 tol=8.65
2024-07-10 09:58:26,381 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=48.8 pTM=0.303 ipTM=0.18 tol=7.67
2024-07-10 09:58:41,973 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=48.4 pTM=0.306 ipTM=0.185 tol=6.79
2024-07-10 09:58:57,578 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=48.8 pTM=0.304 ipTM=0.182 tol=10.5
2024-07-10 09:59:13,174 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=48.6 pTM=0.301 ipTM=0.179 tol=6.14
2024-07-10 09:59:28,788 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=49 pTM=0.303 ipTM=0.181 tol=3.67
2024-07-10 09:59:44,399 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=48.2 pTM=0.301 ipTM=0.176 tol=6.02
2024-07-10 10:00:00,007 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=48.7 pTM=0.303 ipTM=0.178 tol=8.98
2024-07-10 10:00:15,613 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=48.6 pTM=0.303 ipTM=0.177 tol=8.12
2024-07-10 10:00:31,227 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=48.7 pTM=0.304 ipTM=0.178 tol=5.27
2024-07-10 10:00:31,227 alphafold2_multimer_v3_model_5_seed_000 took 483.6s (30 recycles)
2024-07-10 10:00:31,690 reranking models by 'multimer' metric
2024-07-10 10:00:34,937 Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
2024-07-10 10:01:36,957 Relaxation took 65.3s
2024-07-10 10:01:36,957 rank_001_alphafold2_multimer_v3_model_3_seed_000 pLDDT=48.7 pTM=0.311 ipTM=0.181
2024-07-10 10:02:47,201 Relaxation took 70.2s
2024-07-10 10:02:47,201 rank_002_alphafold2_multimer_v3_model_5_seed_000 pLDDT=48.7 pTM=0.304 ipTM=0.178
2024-07-10 10:03:47,313 Relaxation took 60.1s
2024-07-10 10:03:47,313 rank_003_alphafold2_multimer_v3_model_4_seed_000 pLDDT=47.5 pTM=0.315 ipTM=0.151
2024-07-10 10:05:05,724 Relaxation took 78.4s
2024-07-10 10:05:05,724 rank_004_alphafold2_multimer_v3_model_2_seed_000 pLDDT=50.2 pTM=0.286 ipTM=0.156
2024-07-10 10:06:11,702 Relaxation took 66.0s
2024-07-10 10:06:11,702 rank_005_alphafold2_multimer_v3_model_1_seed_000 pLDDT=48.6 pTM=0.277 ipTM=0.141
2024-07-10 10:06:13,134 Done