2024-07-10 10:14:47,943 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3)
2024-07-10 10:14:48,279 Running on GPU
2024-07-10 10:14:52,028 Found 6 citations for tools or databases
2024-07-10 10:14:52,028 Query 1/1: GGH_KAD9 (length 2229)
2024-07-10 10:14:52,492 Sleeping for 8s. Reason: PENDING
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2024-07-10 10:16:03,920 Sleeping for 5s. Reason: RUNNING
2024-07-10 10:16:09,350 Sleeping for 6s. Reason: RUNNING
2024-07-10 10:16:16,090 Sleeping for 7s. Reason: RUNNING
2024-07-10 10:16:23,852 Sleeping for 10s. Reason: RUNNING
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2024-07-10 10:17:34,615 Sleeping for 5s. Reason: RUNNING
2024-07-10 10:17:40,049 Sleeping for 10s. Reason: RUNNING
2024-07-10 10:17:52,850 Sleeping for 6s. Reason: PENDING
2024-07-10 10:17:59,277 Sleeping for 6s. Reason: RUNNING
2024-07-10 10:18:05,689 Sleeping for 8s. Reason: RUNNING
2024-07-10 10:18:14,106 Sleeping for 5s. Reason: RUNNING
2024-07-10 10:18:19,529 Sleeping for 8s. Reason: RUNNING
2024-07-10 10:18:28,002 Sleeping for 10s. Reason: RUNNING
2024-07-10 10:18:38,439 Sleeping for 5s. Reason: RUNNING
2024-07-10 10:18:43,868 Sleeping for 5s. Reason: RUNNING
2024-07-10 10:18:49,277 Sleeping for 9s. Reason: RUNNING
2024-07-10 10:18:58,693 Sleeping for 7s. Reason: RUNNING
2024-07-10 10:19:06,105 Sleeping for 5s. Reason: RUNNING
2024-07-10 10:19:11,509 Sleeping for 10s. Reason: RUNNING
2024-07-10 10:19:22,414 Sleeping for 6s. Reason: RUNNING
2024-07-10 10:19:28,822 Sleeping for 6s. Reason: RUNNING
2024-07-10 10:19:46,359 Setting max_seq=508, max_extra_seq=2048
2024-07-10 10:26:27,086 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=73.4 pTM=0.617 ipTM=0.198
2024-07-10 10:29:58,565 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=74.4 pTM=0.624 ipTM=0.211 tol=11.4
2024-07-10 10:33:29,945 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=74.5 pTM=0.63 ipTM=0.219 tol=9.68
2024-07-10 10:37:01,262 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=74.2 pTM=0.627 ipTM=0.226 tol=4.38
2024-07-10 10:40:32,566 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=74.4 pTM=0.628 ipTM=0.226 tol=6.4
2024-07-10 10:44:03,815 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=74.8 pTM=0.634 ipTM=0.248 tol=3.37
2024-07-10 10:47:34,997 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=74.7 pTM=0.638 ipTM=0.312 tol=3.59
2024-07-10 10:51:06,081 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=75.3 pTM=0.652 ipTM=0.444 tol=2.5
2024-07-10 10:54:37,128 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=75.1 pTM=0.651 ipTM=0.464 tol=1.42
2024-07-10 10:58:08,142 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=75 pTM=0.653 ipTM=0.496 tol=2.21
2024-07-10 11:01:39,135 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=75.1 pTM=0.658 ipTM=0.542 tol=1.58
2024-07-10 11:05:10,049 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=75.4 pTM=0.666 ipTM=0.584 tol=0.855
2024-07-10 11:08:41,023 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=75.3 pTM=0.666 ipTM=0.571 tol=2.73
2024-07-10 11:12:12,007 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=75.1 pTM=0.663 ipTM=0.603 tol=2.07
2024-07-10 11:15:43,008 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=75.5 pTM=0.668 ipTM=0.588 tol=1.37
2024-07-10 11:19:14,055 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=75.4 pTM=0.668 ipTM=0.604 tol=1.61
2024-07-10 11:22:45,131 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=75.3 pTM=0.667 ipTM=0.596 tol=1.04
2024-07-10 11:26:16,175 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=75.4 pTM=0.666 ipTM=0.583 tol=5.74
2024-07-10 11:29:47,237 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=75.4 pTM=0.666 ipTM=0.579 tol=5.82
2024-07-10 11:33:18,280 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=75.4 pTM=0.666 ipTM=0.568 tol=1.33
2024-07-10 11:36:49,358 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=75.1 pTM=0.661 ipTM=0.551 tol=4.97
2024-07-10 11:40:20,418 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=75.4 pTM=0.664 ipTM=0.534 tol=5.05
2024-07-10 11:43:51,384 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=75.4 pTM=0.667 ipTM=0.579 tol=2.03
2024-07-10 11:47:22,377 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=75.4 pTM=0.668 ipTM=0.606 tol=4.78
2024-07-10 11:50:53,395 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=75.2 pTM=0.666 ipTM=0.606 tol=4.64
2024-07-10 11:54:24,420 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=75.4 pTM=0.666 ipTM=0.586 tol=2.88
2024-07-10 11:57:55,395 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=75.5 pTM=0.667 ipTM=0.584 tol=1.87
2024-07-10 12:01:26,375 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=75.5 pTM=0.667 ipTM=0.586 tol=2.55
2024-07-10 12:04:57,384 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=75.5 pTM=0.666 ipTM=0.569 tol=2.76
2024-07-10 12:08:28,361 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=75.3 pTM=0.666 ipTM=0.59 tol=4.56
2024-07-10 12:11:59,389 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=75.4 pTM=0.666 ipTM=0.565 tol=5.77
2024-07-10 12:11:59,391 alphafold2_multimer_v3_model_1_seed_000 took 6727.2s (30 recycles)
2024-07-10 12:15:33,779 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=73 pTM=0.621 ipTM=0.222
2024-07-10 12:19:05,390 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=73.4 pTM=0.624 ipTM=0.216 tol=10.4
2024-07-10 12:22:37,026 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=73.9 pTM=0.625 ipTM=0.217 tol=3.75
2024-07-10 12:26:08,567 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=74 pTM=0.626 ipTM=0.227 tol=4.57
2024-07-10 12:29:40,009 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=74.5 pTM=0.632 ipTM=0.234 tol=5.01
2024-07-10 12:33:11,538 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=74.4 pTM=0.634 ipTM=0.234 tol=4.23
2024-07-10 12:36:43,114 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=74.1 pTM=0.632 ipTM=0.233 tol=2.59
2024-07-10 12:40:14,587 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=74.5 pTM=0.637 ipTM=0.24 tol=2.53
2024-07-10 12:43:46,081 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=74.3 pTM=0.636 ipTM=0.236 tol=2.19
2024-07-10 12:47:17,575 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=74.3 pTM=0.637 ipTM=0.244 tol=2.14
2024-07-10 12:50:49,059 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=74.2 pTM=0.634 ipTM=0.238 tol=2.29
2024-07-10 12:54:20,559 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=74.4 pTM=0.635 ipTM=0.24 tol=1.29
2024-07-10 12:57:52,050 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=74.4 pTM=0.636 ipTM=0.244 tol=0.966
2024-07-10 13:01:23,536 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=74.3 pTM=0.634 ipTM=0.248 tol=2.35
2024-07-10 13:04:54,918 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=74.4 pTM=0.636 ipTM=0.243 tol=1.1
2024-07-10 13:08:26,353 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=74.8 pTM=0.639 ipTM=0.247 tol=1.5
2024-07-10 13:11:57,807 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=74.4 pTM=0.638 ipTM=0.25 tol=1.22
2024-07-10 13:15:29,323 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=74.6 pTM=0.64 ipTM=0.255 tol=1
2024-07-10 13:19:00,821 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=74.8 pTM=0.641 ipTM=0.253 tol=1.05
2024-07-10 13:22:32,295 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=74.8 pTM=0.642 ipTM=0.255 tol=1.66
2024-07-10 13:26:03,760 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=74.4 pTM=0.639 ipTM=0.261 tol=2.55
2024-07-10 13:29:35,271 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=74.6 pTM=0.639 ipTM=0.252 tol=1.72
2024-07-10 13:33:06,785 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=74.6 pTM=0.639 ipTM=0.25 tol=1.54
2024-07-10 13:36:38,264 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=74.6 pTM=0.639 ipTM=0.252 tol=1.42
2024-07-10 13:40:09,753 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=74.4 pTM=0.637 ipTM=0.256 tol=1.69
2024-07-10 13:43:41,207 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=74.6 pTM=0.639 ipTM=0.255 tol=0.95
2024-07-10 13:47:12,716 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=74.8 pTM=0.639 ipTM=0.255 tol=1.54
2024-07-10 13:50:44,202 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=74.7 pTM=0.639 ipTM=0.257 tol=1.87
2024-07-10 13:54:15,695 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=74.6 pTM=0.639 ipTM=0.256 tol=1.72
2024-07-10 13:57:47,206 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=74.7 pTM=0.639 ipTM=0.259 tol=1.56
2024-07-10 14:01:18,664 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=74.8 pTM=0.641 ipTM=0.257 tol=1.65
2024-07-10 14:01:18,667 alphafold2_multimer_v3_model_2_seed_000 took 6556.4s (30 recycles)
2024-07-10 14:04:53,039 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=74.2 pTM=0.632 ipTM=0.207
2024-07-10 14:08:24,491 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=74.9 pTM=0.635 ipTM=0.225 tol=12.5
2024-07-10 14:11:56,042 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=74.6 pTM=0.631 ipTM=0.205 tol=9.09
2024-07-10 14:15:27,552 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=74.6 pTM=0.63 ipTM=0.211 tol=6.38
2024-07-10 14:18:58,940 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=74.8 pTM=0.634 ipTM=0.217 tol=6.67
2024-07-10 14:22:30,444 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=74.6 pTM=0.631 ipTM=0.212 tol=4.79
2024-07-10 14:26:01,960 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=74.7 pTM=0.634 ipTM=0.212 tol=5.37
2024-07-10 14:29:33,521 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=74.6 pTM=0.632 ipTM=0.203 tol=4.9
2024-07-10 14:33:05,020 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=74.9 pTM=0.636 ipTM=0.214 tol=6.51
2024-07-10 14:36:36,439 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=71.6 pTM=0.635 ipTM=0.215 tol=13.8
2024-07-10 14:40:07,820 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=74.2 pTM=0.635 ipTM=0.24 tol=15.3
2024-07-10 14:43:39,141 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=74.7 pTM=0.636 ipTM=0.23 tol=6.56
2024-07-10 14:47:10,568 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=74.6 pTM=0.635 ipTM=0.225 tol=10.8
2024-07-10 14:50:42,074 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=72.1 pTM=0.633 ipTM=0.208 tol=17.8
2024-07-10 14:54:13,644 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=74.4 pTM=0.635 ipTM=0.217 tol=20
2024-07-10 14:57:45,003 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=75.1 pTM=0.639 ipTM=0.235 tol=5.09
2024-07-10 15:01:16,311 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=75.1 pTM=0.639 ipTM=0.241 tol=2.85
2024-07-10 15:04:47,715 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=74.9 pTM=0.636 ipTM=0.214 tol=2.52
2024-07-10 15:08:19,153 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=74.8 pTM=0.635 ipTM=0.213 tol=6.12
2024-07-10 15:11:50,649 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=74.7 pTM=0.636 ipTM=0.214 tol=6.51
2024-07-10 15:15:22,163 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=74.4 pTM=0.633 ipTM=0.205 tol=6.38
2024-07-10 15:18:53,650 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=74.5 pTM=0.634 ipTM=0.224 tol=8.8
2024-07-10 15:22:25,046 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=74.8 pTM=0.634 ipTM=0.218 tol=5.71
2024-07-10 15:25:56,364 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=74.9 pTM=0.635 ipTM=0.215 tol=1.98
2024-07-10 15:29:27,611 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=74.9 pTM=0.634 ipTM=0.223 tol=3.48
2024-07-10 15:32:58,892 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=74.8 pTM=0.634 ipTM=0.221 tol=1.34
2024-07-10 15:36:30,267 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=74.9 pTM=0.635 ipTM=0.217 tol=1.62
2024-07-10 15:40:01,616 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=75.1 pTM=0.636 ipTM=0.222 tol=2.11
2024-07-10 15:43:33,105 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=74.8 pTM=0.633 ipTM=0.207 tol=2.97
2024-07-10 15:47:04,515 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=74.7 pTM=0.631 ipTM=0.21 tol=2.2
2024-07-10 15:50:35,991 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=74.7 pTM=0.633 ipTM=0.206 tol=2.3
2024-07-10 15:50:35,993 alphafold2_multimer_v3_model_3_seed_000 took 6554.5s (30 recycles)
2024-07-10 15:54:10,254 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=73.4 pTM=0.64 ipTM=0.213
2024-07-10 15:57:41,592 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=73.1 pTM=0.639 ipTM=0.238 tol=11.9
2024-07-10 16:01:12,954 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=73.5 pTM=0.637 ipTM=0.211 tol=11.2
2024-07-10 16:04:44,358 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=73.6 pTM=0.633 ipTM=0.21 tol=5.64
2024-07-10 16:08:15,708 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=74.1 pTM=0.644 ipTM=0.234 tol=9.37
2024-07-10 16:11:47,004 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=74 pTM=0.647 ipTM=0.25 tol=3.98
2024-07-10 16:15:18,295 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=74.2 pTM=0.649 ipTM=0.261 tol=3.36
2024-07-10 16:18:49,647 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=74.4 pTM=0.651 ipTM=0.268 tol=3.93
2024-07-10 16:22:21,009 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=74.4 pTM=0.654 ipTM=0.274 tol=1.38
2024-07-10 16:25:52,371 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=74.2 pTM=0.652 ipTM=0.28 tol=3.51
2024-07-10 16:29:23,721 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=74.2 pTM=0.653 ipTM=0.277 tol=0.987
2024-07-10 16:32:55,063 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=74.2 pTM=0.653 ipTM=0.288 tol=2.02
2024-07-10 16:36:26,378 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=74.4 pTM=0.655 ipTM=0.321 tol=4.38
2024-07-10 16:39:57,647 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=74.6 pTM=0.657 ipTM=0.343 tol=3.37
2024-07-10 16:43:28,941 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=74.7 pTM=0.658 ipTM=0.333 tol=1.07
2024-07-10 16:47:00,240 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=74.8 pTM=0.66 ipTM=0.35 tol=1.18
2024-07-10 16:50:31,479 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=75 pTM=0.663 ipTM=0.369 tol=0.754
2024-07-10 16:54:02,774 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=75 pTM=0.663 ipTM=0.355 tol=1.04
2024-07-10 16:57:34,086 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=74.6 pTM=0.659 ipTM=0.337 tol=0.994
2024-07-10 17:01:05,375 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=75 pTM=0.664 ipTM=0.375 tol=1.08
2024-07-10 17:04:36,650 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=74.7 pTM=0.66 ipTM=0.368 tol=3.12
2024-07-10 17:08:07,936 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=74.6 pTM=0.658 ipTM=0.335 tol=1.34
2024-07-10 17:11:39,216 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=74.7 pTM=0.658 ipTM=0.323 tol=2.88
2024-07-10 17:15:10,567 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=74.6 pTM=0.657 ipTM=0.311 tol=1.4
2024-07-10 17:18:41,884 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=74.5 pTM=0.657 ipTM=0.314 tol=1.21
2024-07-10 17:22:13,142 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=74.4 pTM=0.655 ipTM=0.324 tol=1.34
2024-07-10 17:25:44,462 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=74.6 pTM=0.656 ipTM=0.313 tol=2.78
2024-07-10 17:29:15,697 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=74.4 pTM=0.656 ipTM=0.319 tol=3.13
2024-07-10 17:32:46,923 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=74.8 pTM=0.661 ipTM=0.362 tol=1.42
2024-07-10 17:36:18,228 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=74.8 pTM=0.658 ipTM=0.341 tol=3.35
2024-07-10 17:39:49,522 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=74.6 pTM=0.656 ipTM=0.309 tol=3.61
2024-07-10 17:39:49,524 alphafold2_multimer_v3_model_4_seed_000 took 6550.7s (30 recycles)
2024-07-10 17:43:23,677 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=72.9 pTM=0.629 ipTM=0.236
2024-07-10 17:46:54,936 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=73.8 pTM=0.635 ipTM=0.238 tol=5.66
2024-07-10 17:50:26,226 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=73.9 pTM=0.637 ipTM=0.227 tol=6.75
2024-07-10 17:53:57,549 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=73.9 pTM=0.636 ipTM=0.22 tol=4.33
2024-07-10 17:57:28,941 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=74.2 pTM=0.639 ipTM=0.216 tol=4.43
2024-07-10 18:01:00,287 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=74.2 pTM=0.641 ipTM=0.23 tol=9.34
2024-07-10 18:04:31,585 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=74.2 pTM=0.641 ipTM=0.24 tol=4.5
2024-07-10 18:08:02,904 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=74.4 pTM=0.643 ipTM=0.242 tol=2.83
2024-07-10 18:11:34,184 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=74.4 pTM=0.644 ipTM=0.242 tol=1.79
2024-07-10 18:15:05,417 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=74.4 pTM=0.643 ipTM=0.249 tol=1.52
2024-07-10 18:18:36,705 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=74.4 pTM=0.644 ipTM=0.25 tol=0.98
2024-07-10 18:22:07,985 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=74.4 pTM=0.645 ipTM=0.258 tol=1.33
2024-07-10 18:25:39,225 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=74.3 pTM=0.646 ipTM=0.262 tol=1.47
2024-07-10 18:29:10,415 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=74.3 pTM=0.646 ipTM=0.276 tol=1.55
2024-07-10 18:32:41,665 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=74.7 pTM=0.65 ipTM=0.281 tol=2.55
2024-07-10 18:36:12,901 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=74.6 pTM=0.65 ipTM=0.281 tol=2.76
2024-07-10 18:39:44,118 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=74.6 pTM=0.65 ipTM=0.287 tol=1.07
2024-07-10 18:43:15,301 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=74.7 pTM=0.653 ipTM=0.292 tol=1.02
2024-07-10 18:46:46,514 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=74.7 pTM=0.654 ipTM=0.302 tol=5.22
2024-07-10 18:50:17,689 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=74.8 pTM=0.653 ipTM=0.302 tol=2.37
2024-07-10 18:53:48,917 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=74.6 pTM=0.653 ipTM=0.302 tol=2.44
2024-07-10 18:57:20,143 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=74.6 pTM=0.653 ipTM=0.3 tol=3.33
2024-07-10 19:00:51,378 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=74.8 pTM=0.654 ipTM=0.301 tol=2.78
2024-07-10 19:04:22,596 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=74.8 pTM=0.653 ipTM=0.298 tol=0.908
2024-07-10 19:07:53,829 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=74.6 pTM=0.652 ipTM=0.298 tol=1.23
2024-07-10 19:11:25,011 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=74.4 pTM=0.649 ipTM=0.297 tol=0.706
2024-07-10 19:14:56,211 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=74.6 pTM=0.652 ipTM=0.296 tol=1.18
2024-07-10 19:18:27,456 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=74.6 pTM=0.652 ipTM=0.303 tol=1.27
2024-07-10 19:21:58,703 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=74.7 pTM=0.653 ipTM=0.303 tol=1.03
2024-07-10 19:25:29,909 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=74.6 pTM=0.652 ipTM=0.297 tol=1.07
2024-07-10 19:29:01,118 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=74.6 pTM=0.651 ipTM=0.298 tol=0.92
2024-07-10 19:29:01,121 alphafold2_multimer_v3_model_5_seed_000 took 6548.8s (30 recycles)
2024-07-10 19:29:03,968 reranking models by 'multimer' metric
2024-07-10 19:29:07,804 Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
2024-07-10 19:33:24,098 Relaxation took 260.1s
2024-07-10 19:33:24,098 rank_001_alphafold2_multimer_v3_model_1_seed_000 pLDDT=75.4 pTM=0.666 ipTM=0.565
2024-07-10 19:37:22,874 Relaxation took 238.8s
2024-07-10 19:37:22,874 rank_002_alphafold2_multimer_v3_model_4_seed_000 pLDDT=74.6 pTM=0.656 ipTM=0.309
2024-07-10 19:42:19,238 Relaxation took 296.4s
2024-07-10 19:42:19,238 rank_003_alphafold2_multimer_v3_model_5_seed_000 pLDDT=74.6 pTM=0.651 ipTM=0.298
2024-07-10 19:50:24,059 Relaxation took 484.8s
2024-07-10 19:50:24,059 rank_004_alphafold2_multimer_v3_model_2_seed_000 pLDDT=74.8 pTM=0.641 ipTM=0.257
2024-07-10 19:57:58,020 Relaxation took 454.0s
2024-07-10 19:57:58,021 rank_005_alphafold2_multimer_v3_model_3_seed_000 pLDDT=74.7 pTM=0.633 ipTM=0.206
2024-07-10 19:58:04,256 Done