2024-07-10 10:47:28,244 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3)
2024-07-10 10:47:28,570 Running on GPU
2024-07-10 10:47:32,384 Found 6 citations for tools or databases
2024-07-10 10:47:32,384 Query 1/1: GLB1L_ST20 (length 733)
2024-07-10 10:47:33,627 Sleeping for 6s. Reason: PENDING
2024-07-10 10:47:40,334 Sleeping for 5s. Reason: RUNNING
2024-07-10 10:47:45,777 Sleeping for 7s. Reason: RUNNING
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2024-07-10 10:48:00,629 Sleeping for 6s. Reason: RUNNING
2024-07-10 10:48:07,048 Sleeping for 8s. Reason: RUNNING
2024-07-10 10:48:15,486 Sleeping for 5s. Reason: RUNNING
2024-07-10 10:48:20,910 Sleeping for 8s. Reason: RUNNING
2024-07-10 10:48:29,324 Sleeping for 7s. Reason: RUNNING
2024-07-10 10:48:36,747 Sleeping for 10s. Reason: RUNNING
2024-07-10 10:48:47,191 Sleeping for 10s. Reason: RUNNING
2024-07-10 10:49:26,228 Sleeping for 6s. Reason: PENDING
2024-07-10 10:49:32,658 Sleeping for 7s. Reason: RUNNING
2024-07-10 10:49:40,075 Sleeping for 7s. Reason: RUNNING
2024-07-10 10:49:47,499 Sleeping for 6s. Reason: RUNNING
2024-07-10 10:49:54,244 Sleeping for 7s. Reason: RUNNING
2024-07-10 10:50:01,813 Sleeping for 10s. Reason: RUNNING
2024-07-10 10:50:15,610 Setting max_seq=508, max_extra_seq=1579
2024-07-10 10:53:14,026 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=80.6 pTM=0.806 ipTM=0.175
2024-07-10 10:53:24,831 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=80.2 pTM=0.809 ipTM=0.159 tol=6.63
2024-07-10 10:53:35,659 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=81.1 pTM=0.812 ipTM=0.187 tol=4.64
2024-07-10 10:53:46,470 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=80.8 pTM=0.812 ipTM=0.188 tol=1.78
2024-07-10 10:53:57,302 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=80.7 pTM=0.811 ipTM=0.189 tol=1.68
2024-07-10 10:54:08,149 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=80.8 pTM=0.811 ipTM=0.185 tol=1.43
2024-07-10 10:54:19,010 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=80.9 pTM=0.81 ipTM=0.183 tol=1.9
2024-07-10 10:54:29,874 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=80.7 pTM=0.81 ipTM=0.18 tol=5.38
2024-07-10 10:54:40,768 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=81 pTM=0.81 ipTM=0.183 tol=4.86
2024-07-10 10:54:51,654 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=80.6 pTM=0.81 ipTM=0.185 tol=4.88
2024-07-10 10:55:02,556 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=80.8 pTM=0.812 ipTM=0.207 tol=2.85
2024-07-10 10:55:13,450 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=80.7 pTM=0.812 ipTM=0.199 tol=3.2
2024-07-10 10:55:24,356 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=80.7 pTM=0.812 ipTM=0.196 tol=1.29
2024-07-10 10:55:35,246 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=80.6 pTM=0.812 ipTM=0.208 tol=1.51
2024-07-10 10:55:46,144 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=80.8 pTM=0.812 ipTM=0.207 tol=0.706
2024-07-10 10:55:57,038 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=80.7 pTM=0.812 ipTM=0.216 tol=0.692
2024-07-10 10:56:07,938 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=80.8 pTM=0.811 ipTM=0.202 tol=1.07
2024-07-10 10:56:18,831 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=80.8 pTM=0.812 ipTM=0.213 tol=0.799
2024-07-10 10:56:29,731 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=80.9 pTM=0.812 ipTM=0.21 tol=0.715
2024-07-10 10:56:40,628 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=80.8 pTM=0.812 ipTM=0.217 tol=0.684
2024-07-10 10:56:51,527 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=80.9 pTM=0.812 ipTM=0.213 tol=0.717
2024-07-10 10:57:02,417 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=80.7 pTM=0.813 ipTM=0.224 tol=0.806
2024-07-10 10:57:13,321 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=80.8 pTM=0.813 ipTM=0.22 tol=0.575
2024-07-10 10:57:24,223 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=81 pTM=0.814 ipTM=0.226 tol=0.849
2024-07-10 10:57:35,129 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=80.9 pTM=0.813 ipTM=0.22 tol=0.671
2024-07-10 10:57:46,030 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=80.9 pTM=0.813 ipTM=0.226 tol=0.573
2024-07-10 10:57:56,929 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=80.9 pTM=0.813 ipTM=0.217 tol=0.579
2024-07-10 10:58:07,833 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=80.9 pTM=0.814 ipTM=0.229 tol=0.707
2024-07-10 10:58:18,740 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=80.9 pTM=0.812 ipTM=0.213 tol=0.782
2024-07-10 10:58:29,642 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=80.8 pTM=0.814 ipTM=0.233 tol=0.85
2024-07-10 10:58:40,526 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=80.6 pTM=0.811 ipTM=0.202 tol=1.59
2024-07-10 10:58:40,527 alphafold2_multimer_v3_model_1_seed_000 took 500.1s (30 recycles)
2024-07-10 10:58:51,718 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=79.9 pTM=0.805 ipTM=0.176
2024-07-10 10:59:02,633 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=80.5 pTM=0.814 ipTM=0.22 tol=3.22
2024-07-10 10:59:13,542 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=81.2 pTM=0.817 ipTM=0.232 tol=1.32
2024-07-10 10:59:24,443 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=81.1 pTM=0.817 ipTM=0.236 tol=0.686
2024-07-10 10:59:35,328 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=80.9 pTM=0.813 ipTM=0.21 tol=0.559
2024-07-10 10:59:46,237 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=80.9 pTM=0.812 ipTM=0.196 tol=0.406
2024-07-10 10:59:46,238 alphafold2_multimer_v3_model_2_seed_000 took 65.4s (5 recycles)
2024-07-10 10:59:57,445 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=80.2 pTM=0.812 ipTM=0.244
2024-07-10 11:00:08,368 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=81.2 pTM=0.822 ipTM=0.317 tol=5.78
2024-07-10 11:00:19,274 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=81.4 pTM=0.825 ipTM=0.354 tol=2.46
2024-07-10 11:00:30,207 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=81.9 pTM=0.827 ipTM=0.363 tol=1.25
2024-07-10 11:00:41,144 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=82 pTM=0.828 ipTM=0.366 tol=0.602
2024-07-10 11:00:52,090 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=82 pTM=0.828 ipTM=0.366 tol=0.417
2024-07-10 11:00:52,090 alphafold2_multimer_v3_model_3_seed_000 took 65.5s (5 recycles)
2024-07-10 11:01:03,313 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=81 pTM=0.816 ipTM=0.246
2024-07-10 11:01:14,272 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=81.5 pTM=0.817 ipTM=0.217 tol=4.28
2024-07-10 11:01:25,207 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=81.3 pTM=0.811 ipTM=0.18 tol=2
2024-07-10 11:01:36,138 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=81.1 pTM=0.81 ipTM=0.166 tol=1.5
2024-07-10 11:01:47,081 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=81.4 pTM=0.811 ipTM=0.188 tol=1.1
2024-07-10 11:01:58,015 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=81.3 pTM=0.811 ipTM=0.17 tol=5.38
2024-07-10 11:02:08,961 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=81.8 pTM=0.818 ipTM=0.26 tol=3.8
2024-07-10 11:02:19,925 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=82.1 pTM=0.825 ipTM=0.326 tol=3.13
2024-07-10 11:02:30,892 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=82.2 pTM=0.826 ipTM=0.343 tol=0.788
2024-07-10 11:02:41,865 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=82.4 pTM=0.829 ipTM=0.36 tol=2.14
2024-07-10 11:02:52,843 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=82.2 pTM=0.826 ipTM=0.344 tol=0.875
2024-07-10 11:03:03,820 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=82.2 pTM=0.828 ipTM=0.354 tol=0.674
2024-07-10 11:03:14,785 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=82.1 pTM=0.827 ipTM=0.354 tol=0.622
2024-07-10 11:03:25,747 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=82.2 pTM=0.827 ipTM=0.353 tol=0.437
2024-07-10 11:03:25,748 alphafold2_multimer_v3_model_4_seed_000 took 153.3s (13 recycles)
2024-07-10 11:03:36,976 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=79.8 pTM=0.805 ipTM=0.176
2024-07-10 11:03:47,920 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=80.5 pTM=0.81 ipTM=0.172 tol=2.55
2024-07-10 11:03:58,869 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=80.9 pTM=0.813 ipTM=0.2 tol=1.89
2024-07-10 11:04:09,821 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=81.1 pTM=0.812 ipTM=0.172 tol=1.05
2024-07-10 11:04:20,761 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=81 pTM=0.811 ipTM=0.162 tol=2.69
2024-07-10 11:04:31,713 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=81.1 pTM=0.812 ipTM=0.209 tol=2.59
2024-07-10 11:04:42,679 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=81.4 pTM=0.813 ipTM=0.206 tol=1.05
2024-07-10 11:04:53,631 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=81.3 pTM=0.812 ipTM=0.202 tol=0.667
2024-07-10 11:05:04,600 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=81.4 pTM=0.813 ipTM=0.2 tol=0.478
2024-07-10 11:05:04,601 alphafold2_multimer_v3_model_5_seed_000 took 98.5s (8 recycles)
2024-07-10 11:05:04,934 reranking models by 'multimer' metric
2024-07-10 11:05:08,240 Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
2024-07-10 11:06:01,523 Relaxation took 56.6s
2024-07-10 11:06:01,523 rank_001_alphafold2_multimer_v3_model_3_seed_000 pLDDT=82 pTM=0.828 ipTM=0.366
2024-07-10 11:06:55,633 Relaxation took 54.1s
2024-07-10 11:06:55,633 rank_002_alphafold2_multimer_v3_model_4_seed_000 pLDDT=82.2 pTM=0.827 ipTM=0.353
2024-07-10 11:07:50,500 Relaxation took 54.9s
2024-07-10 11:07:50,500 rank_003_alphafold2_multimer_v3_model_1_seed_000 pLDDT=80.6 pTM=0.811 ipTM=0.202
2024-07-10 11:08:38,174 Relaxation took 47.7s
2024-07-10 11:08:38,174 rank_004_alphafold2_multimer_v3_model_5_seed_000 pLDDT=81.4 pTM=0.813 ipTM=0.2
2024-07-10 11:09:23,259 Relaxation took 45.1s
2024-07-10 11:09:23,260 rank_005_alphafold2_multimer_v3_model_2_seed_000 pLDDT=80.9 pTM=0.812 ipTM=0.196
2024-07-10 11:09:24,577 Done