2024-07-10 12:46:09,029 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3) 2024-07-10 12:46:09,347 Running on GPU 2024-07-10 12:46:12,847 Found 6 citations for tools or databases 2024-07-10 12:46:12,847 Query 1/1: GP143_ADRB1 (length 881) 2024-07-10 12:46:13,288 Sleeping for 5s. Reason: PENDING 2024-07-10 12:46:18,707 Sleeping for 5s. Reason: RUNNING 2024-07-10 12:46:24,117 Sleeping for 8s. Reason: RUNNING 2024-07-10 12:46:32,538 Sleeping for 9s. Reason: RUNNING 2024-07-10 12:46:41,982 Sleeping for 10s. Reason: RUNNING 2024-07-10 12:46:52,407 Sleeping for 7s. Reason: RUNNING 2024-07-10 12:46:59,839 Sleeping for 7s. Reason: RUNNING 2024-07-10 12:47:07,288 Sleeping for 5s. Reason: RUNNING 2024-07-10 12:47:12,733 Sleeping for 10s. Reason: RUNNING 2024-07-10 12:47:23,155 Sleeping for 7s. Reason: RUNNING 2024-07-10 12:47:30,741 Sleeping for 10s. Reason: RUNNING 2024-07-10 12:47:41,188 Sleeping for 5s. Reason: RUNNING 2024-07-10 12:47:46,596 Sleeping for 7s. Reason: RUNNING 2024-07-10 12:47:54,020 Sleeping for 5s. Reason: RUNNING 2024-07-10 12:47:59,435 Sleeping for 6s. Reason: RUNNING 2024-07-10 12:48:05,848 Sleeping for 6s. Reason: RUNNING 2024-07-10 12:48:12,261 Sleeping for 9s. Reason: RUNNING 2024-07-10 12:48:21,723 Sleeping for 5s. Reason: RUNNING 2024-07-10 12:48:27,165 Sleeping for 10s. Reason: RUNNING 2024-07-10 12:48:56,946 Sleeping for 7s. Reason: PENDING 2024-07-10 12:49:04,352 Sleeping for 9s. Reason: RUNNING 2024-07-10 12:49:13,949 Sleeping for 10s. Reason: RUNNING 2024-07-10 12:49:24,368 Sleeping for 6s. Reason: RUNNING 2024-07-10 12:49:30,782 Sleeping for 10s. Reason: RUNNING 2024-07-10 12:49:41,205 Sleeping for 5s. Reason: RUNNING 2024-07-10 12:49:46,634 Sleeping for 7s. Reason: RUNNING 2024-07-10 12:49:54,052 Sleeping for 8s. Reason: RUNNING 2024-07-10 12:50:03,623 Sleeping for 6s. Reason: RUNNING 2024-07-10 12:50:11,164 Sleeping for 9s. Reason: RUNNING 2024-07-10 12:50:23,601 Setting max_seq=508, max_extra_seq=2048 2024-07-10 12:53:25,719 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=59.5 pTM=0.41 ipTM=0.153 2024-07-10 12:53:41,885 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=62.5 pTM=0.426 ipTM=0.175 tol=14.2 2024-07-10 12:53:58,128 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=62 pTM=0.419 ipTM=0.138 tol=7.12 2024-07-10 12:54:14,425 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=62.6 pTM=0.415 ipTM=0.159 tol=7.46 2024-07-10 12:54:30,749 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=63 pTM=0.419 ipTM=0.16 tol=3.94 2024-07-10 12:54:47,114 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=62.9 pTM=0.421 ipTM=0.168 tol=4.89 2024-07-10 12:55:03,505 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=63 pTM=0.42 ipTM=0.165 tol=2.81 2024-07-10 12:55:19,900 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=63.1 pTM=0.417 ipTM=0.163 tol=1.7 2024-07-10 12:55:36,315 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=63 pTM=0.417 ipTM=0.153 tol=3.12 2024-07-10 12:55:52,730 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=63.3 pTM=0.419 ipTM=0.16 tol=2.03 2024-07-10 12:56:09,148 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=63.2 pTM=0.419 ipTM=0.156 tol=1.53 2024-07-10 12:56:25,580 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=63.1 pTM=0.42 ipTM=0.163 tol=2.34 2024-07-10 12:56:42,013 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=63.2 pTM=0.416 ipTM=0.15 tol=2.11 2024-07-10 12:56:58,446 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=63 pTM=0.418 ipTM=0.163 tol=2.64 2024-07-10 12:57:14,891 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=62.9 pTM=0.417 ipTM=0.149 tol=2.62 2024-07-10 12:57:31,334 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=63 pTM=0.422 ipTM=0.164 tol=2.71 2024-07-10 12:57:47,768 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=63.1 pTM=0.418 ipTM=0.155 tol=3.12 2024-07-10 12:58:04,188 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=63.1 pTM=0.421 ipTM=0.166 tol=2.97 2024-07-10 12:58:20,622 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=63 pTM=0.418 ipTM=0.157 tol=2.79 2024-07-10 12:58:37,060 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=62.9 pTM=0.421 ipTM=0.165 tol=2.79 2024-07-10 12:58:53,504 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=63.3 pTM=0.417 ipTM=0.155 tol=2.3 2024-07-10 12:59:09,948 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=63.2 pTM=0.42 ipTM=0.163 tol=1.72 2024-07-10 12:59:26,403 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=63 pTM=0.419 ipTM=0.162 tol=2.01 2024-07-10 12:59:42,844 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=63.2 pTM=0.419 ipTM=0.158 tol=1.83 2024-07-10 12:59:59,286 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=63.2 pTM=0.419 ipTM=0.161 tol=1.59 2024-07-10 13:00:15,730 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=63.2 pTM=0.419 ipTM=0.162 tol=2.11 2024-07-10 13:00:32,186 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=63.1 pTM=0.417 ipTM=0.157 tol=2.64 2024-07-10 13:00:48,646 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=63.2 pTM=0.419 ipTM=0.165 tol=2.61 2024-07-10 13:01:05,120 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=63.1 pTM=0.419 ipTM=0.16 tol=3.65 2024-07-10 13:01:21,579 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=63.1 pTM=0.419 ipTM=0.161 tol=1.85 2024-07-10 13:01:38,050 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=63.1 pTM=0.418 ipTM=0.16 tol=3.54 2024-07-10 13:01:38,051 alphafold2_multimer_v3_model_1_seed_000 took 669.2s (30 recycles) 2024-07-10 13:01:54,934 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=58.6 pTM=0.425 ipTM=0.177 2024-07-10 13:02:11,397 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=61 pTM=0.424 ipTM=0.166 tol=15.3 2024-07-10 13:02:27,863 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=61.5 pTM=0.424 ipTM=0.173 tol=13 2024-07-10 13:02:44,352 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=62.1 pTM=0.414 ipTM=0.149 tol=5.53 2024-07-10 13:03:00,861 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=62.1 pTM=0.411 ipTM=0.138 tol=5.29 2024-07-10 13:03:17,351 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=62.7 pTM=0.422 ipTM=0.166 tol=8.02 2024-07-10 13:03:33,843 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=62.3 pTM=0.418 ipTM=0.16 tol=4.07 2024-07-10 13:03:50,350 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=62.6 pTM=0.412 ipTM=0.145 tol=7.45 2024-07-10 13:04:06,827 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=62.1 pTM=0.418 ipTM=0.158 tol=7.51 2024-07-10 13:04:23,318 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=63 pTM=0.419 ipTM=0.161 tol=4.25 2024-07-10 13:04:39,821 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=62.7 pTM=0.415 ipTM=0.152 tol=8.02 2024-07-10 13:04:56,319 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=61.8 pTM=0.415 ipTM=0.154 tol=9.03 2024-07-10 13:05:12,823 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=63.1 pTM=0.418 ipTM=0.154 tol=5.11 2024-07-10 13:05:29,316 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=62.7 pTM=0.414 ipTM=0.152 tol=9.38 2024-07-10 13:05:45,788 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=62.4 pTM=0.425 ipTM=0.171 tol=9.52 2024-07-10 13:06:02,281 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=62.8 pTM=0.42 ipTM=0.158 tol=4.25 2024-07-10 13:06:18,758 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=62.8 pTM=0.418 ipTM=0.156 tol=12 2024-07-10 13:06:35,267 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=62.2 pTM=0.414 ipTM=0.153 tol=9.02 2024-07-10 13:06:51,755 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=63.1 pTM=0.424 ipTM=0.166 tol=4.85 2024-07-10 13:07:08,251 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=62.6 pTM=0.416 ipTM=0.143 tol=9.56 2024-07-10 13:07:24,733 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=62.5 pTM=0.418 ipTM=0.156 tol=8.33 2024-07-10 13:07:41,228 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=62.8 pTM=0.415 ipTM=0.153 tol=3.16 2024-07-10 13:07:57,730 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=62.6 pTM=0.413 ipTM=0.148 tol=2.42 2024-07-10 13:08:14,224 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=62.7 pTM=0.411 ipTM=0.144 tol=6.34 2024-07-10 13:08:30,710 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=63.2 pTM=0.426 ipTM=0.174 tol=8.47 2024-07-10 13:08:47,194 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=62.9 pTM=0.417 ipTM=0.157 tol=3.15 2024-07-10 13:09:03,684 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=62.8 pTM=0.413 ipTM=0.152 tol=8.91 2024-07-10 13:09:20,171 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=62.3 pTM=0.414 ipTM=0.156 tol=7.83 2024-07-10 13:09:36,646 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=63.1 pTM=0.42 ipTM=0.163 tol=3.78 2024-07-10 13:09:53,116 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=59.3 pTM=0.415 ipTM=0.151 tol=17 2024-07-10 13:10:09,617 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=62.5 pTM=0.414 ipTM=0.154 tol=16.9 2024-07-10 13:10:09,618 alphafold2_multimer_v3_model_2_seed_000 took 511.1s (30 recycles) 2024-07-10 13:10:26,523 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=62.1 pTM=0.531 ipTM=0.425 2024-07-10 13:10:43,001 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=61 pTM=0.423 ipTM=0.184 tol=11.3 2024-07-10 13:10:59,517 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=61 pTM=0.414 ipTM=0.156 tol=9.48 2024-07-10 13:11:16,006 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=61.4 pTM=0.424 ipTM=0.189 tol=11 2024-07-10 13:11:32,522 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=61 pTM=0.413 ipTM=0.159 tol=12.2 2024-07-10 13:11:49,044 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=61.5 pTM=0.411 ipTM=0.155 tol=6 2024-07-10 13:12:05,528 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=61.5 pTM=0.418 ipTM=0.152 tol=8.66 2024-07-10 13:12:21,998 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=61.7 pTM=0.42 ipTM=0.172 tol=9.87 2024-07-10 13:12:38,474 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=62.1 pTM=0.418 ipTM=0.162 tol=10.3 2024-07-10 13:12:54,949 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=61.5 pTM=0.418 ipTM=0.168 tol=10.4 2024-07-10 13:13:11,408 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=62 pTM=0.419 ipTM=0.175 tol=12.7 2024-07-10 13:13:27,878 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=61.4 pTM=0.414 ipTM=0.155 tol=12.9 2024-07-10 13:13:44,320 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=61.9 pTM=0.433 ipTM=0.193 tol=11.8 2024-07-10 13:14:00,799 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=61.2 pTM=0.41 ipTM=0.145 tol=11.4 2024-07-10 13:14:17,293 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=61.5 pTM=0.415 ipTM=0.156 tol=10.4 2024-07-10 13:14:33,792 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=61.4 pTM=0.417 ipTM=0.154 tol=11.2 2024-07-10 13:14:50,265 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=61.8 pTM=0.42 ipTM=0.172 tol=12.3 2024-07-10 13:15:06,758 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=61.3 pTM=0.413 ipTM=0.154 tol=10.8 2024-07-10 13:15:23,244 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=61.2 pTM=0.412 ipTM=0.156 tol=11.6 2024-07-10 13:15:39,741 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=61.2 pTM=0.407 ipTM=0.147 tol=8.5 2024-07-10 13:15:56,215 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=61.5 pTM=0.424 ipTM=0.166 tol=7.27 2024-07-10 13:16:12,706 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=61.4 pTM=0.413 ipTM=0.15 tol=2.43 2024-07-10 13:16:29,230 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=61.5 pTM=0.414 ipTM=0.159 tol=9.77 2024-07-10 13:16:45,765 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=61.5 pTM=0.407 ipTM=0.138 tol=6.52 2024-07-10 13:17:02,261 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=61.5 pTM=0.433 ipTM=0.199 tol=11.5 2024-07-10 13:17:18,757 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=61.5 pTM=0.415 ipTM=0.161 tol=3.11 2024-07-10 13:17:35,252 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=62.1 pTM=0.428 ipTM=0.191 tol=12.1 2024-07-10 13:17:51,786 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=61.1 pTM=0.41 ipTM=0.15 tol=12.2 2024-07-10 13:18:08,310 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=61.7 pTM=0.419 ipTM=0.17 tol=5.43 2024-07-10 13:18:24,831 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=61.4 pTM=0.415 ipTM=0.156 tol=6.89 2024-07-10 13:18:41,325 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=61.9 pTM=0.433 ipTM=0.195 tol=12.2 2024-07-10 13:18:41,326 alphafold2_multimer_v3_model_3_seed_000 took 511.2s (30 recycles) 2024-07-10 13:18:58,260 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=62.7 pTM=0.542 ipTM=0.443 2024-07-10 13:19:14,786 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=61.4 pTM=0.415 ipTM=0.149 tol=12.5 2024-07-10 13:19:31,260 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=63.3 pTM=0.511 ipTM=0.345 tol=10.9 2024-07-10 13:19:47,803 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=62.8 pTM=0.436 ipTM=0.167 tol=7.31 2024-07-10 13:20:04,326 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=62.8 pTM=0.437 ipTM=0.182 tol=5.17 2024-07-10 13:20:20,878 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=63.3 pTM=0.422 ipTM=0.164 tol=4.2 2024-07-10 13:20:37,406 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=62.3 pTM=0.433 ipTM=0.174 tol=3.02 2024-07-10 13:20:53,919 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=63.3 pTM=0.443 ipTM=0.199 tol=2.06 2024-07-10 13:21:10,447 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=63.1 pTM=0.43 ipTM=0.165 tol=1.8 2024-07-10 13:21:26,987 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=63.3 pTM=0.44 ipTM=0.192 tol=1.6 2024-07-10 13:21:43,535 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=63 pTM=0.427 ipTM=0.163 tol=5.84 2024-07-10 13:22:00,059 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=62.9 pTM=0.445 ipTM=0.199 tol=3.19 2024-07-10 13:22:16,594 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=62.7 pTM=0.428 ipTM=0.165 tol=3.62 2024-07-10 13:22:33,166 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=62.7 pTM=0.434 ipTM=0.179 tol=6.26 2024-07-10 13:22:49,740 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=62.7 pTM=0.419 ipTM=0.158 tol=6.55 2024-07-10 13:23:06,263 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=63.2 pTM=0.441 ipTM=0.183 tol=7.84 2024-07-10 13:23:22,804 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=62.9 pTM=0.426 ipTM=0.16 tol=2.17 2024-07-10 13:23:39,350 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=63.2 pTM=0.432 ipTM=0.175 tol=2.45 2024-07-10 13:23:55,918 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=62.8 pTM=0.424 ipTM=0.159 tol=2.18 2024-07-10 13:24:12,484 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=62.8 pTM=0.438 ipTM=0.184 tol=4.51 2024-07-10 13:24:29,051 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=63.1 pTM=0.422 ipTM=0.16 tol=2.55 2024-07-10 13:24:45,591 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=63.2 pTM=0.443 ipTM=0.186 tol=6.44 2024-07-10 13:25:02,135 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=62.8 pTM=0.43 ipTM=0.163 tol=3.55 2024-07-10 13:25:18,690 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=63.1 pTM=0.437 ipTM=0.182 tol=2.98 2024-07-10 13:25:35,249 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=62.9 pTM=0.429 ipTM=0.167 tol=4.21 2024-07-10 13:25:51,801 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=63.2 pTM=0.44 ipTM=0.191 tol=4.25 2024-07-10 13:26:08,367 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=63.3 pTM=0.426 ipTM=0.161 tol=1.54 2024-07-10 13:26:24,916 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=63 pTM=0.438 ipTM=0.189 tol=4.13 2024-07-10 13:26:41,450 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=63.3 pTM=0.426 ipTM=0.162 tol=2.39 2024-07-10 13:26:57,975 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=62.9 pTM=0.434 ipTM=0.179 tol=6.52 2024-07-10 13:27:14,545 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=63 pTM=0.424 ipTM=0.16 tol=1.51 2024-07-10 13:27:14,546 alphafold2_multimer_v3_model_4_seed_000 took 512.7s (30 recycles) 2024-07-10 13:27:31,487 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=59.4 pTM=0.413 ipTM=0.159 2024-07-10 13:27:47,958 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=59.9 pTM=0.468 ipTM=0.283 tol=8.71 2024-07-10 13:28:04,499 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=58.5 pTM=0.414 ipTM=0.162 tol=15.9 2024-07-10 13:28:21,039 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=61.2 pTM=0.416 ipTM=0.155 tol=17.2 2024-07-10 13:28:37,572 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=60.2 pTM=0.407 ipTM=0.14 tol=13 2024-07-10 13:28:54,097 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=61.9 pTM=0.415 ipTM=0.145 tol=12.1 2024-07-10 13:29:10,622 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=61.3 pTM=0.407 ipTM=0.135 tol=5.92 2024-07-10 13:29:27,153 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=62 pTM=0.419 ipTM=0.152 tol=3.52 2024-07-10 13:29:43,686 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=61.8 pTM=0.414 ipTM=0.143 tol=4.05 2024-07-10 13:30:00,198 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=61.9 pTM=0.422 ipTM=0.153 tol=6.73 2024-07-10 13:30:16,708 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=61.9 pTM=0.419 ipTM=0.151 tol=3.07 2024-07-10 13:30:33,208 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=61.6 pTM=0.427 ipTM=0.166 tol=3.67 2024-07-10 13:30:49,733 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=61.5 pTM=0.423 ipTM=0.16 tol=10.7 2024-07-10 13:31:06,270 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=61.4 pTM=0.404 ipTM=0.122 tol=10.1 2024-07-10 13:31:22,763 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=61.9 pTM=0.422 ipTM=0.159 tol=11.3 2024-07-10 13:31:39,234 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=61.9 pTM=0.419 ipTM=0.149 tol=4.96 2024-07-10 13:31:55,721 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=61.3 pTM=0.425 ipTM=0.166 tol=5.23 2024-07-10 13:32:12,223 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=61.8 pTM=0.419 ipTM=0.152 tol=5.42 2024-07-10 13:32:28,728 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=61.1 pTM=0.422 ipTM=0.157 tol=6.67 2024-07-10 13:32:45,231 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=61.7 pTM=0.417 ipTM=0.149 tol=8.99 2024-07-10 13:33:01,768 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=61.4 pTM=0.41 ipTM=0.14 tol=6.78 2024-07-10 13:33:18,296 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=62.1 pTM=0.416 ipTM=0.147 tol=4.9 2024-07-10 13:33:34,855 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=61.3 pTM=0.419 ipTM=0.151 tol=5.07 2024-07-10 13:33:51,366 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=61.9 pTM=0.426 ipTM=0.164 tol=9.41 2024-07-10 13:34:07,868 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=61.5 pTM=0.425 ipTM=0.164 tol=13.2 2024-07-10 13:34:24,390 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=61.9 pTM=0.421 ipTM=0.154 tol=7.23 2024-07-10 13:34:40,897 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=61.5 pTM=0.423 ipTM=0.158 tol=4.84 2024-07-10 13:34:57,431 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=61.8 pTM=0.417 ipTM=0.148 tol=5.96 2024-07-10 13:35:13,958 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=61.4 pTM=0.415 ipTM=0.14 tol=5.84 2024-07-10 13:35:30,454 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=61.8 pTM=0.425 ipTM=0.159 tol=9.35 2024-07-10 13:35:46,991 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=61.5 pTM=0.408 ipTM=0.133 tol=6.76 2024-07-10 13:35:46,992 alphafold2_multimer_v3_model_5_seed_000 took 512.0s (30 recycles) 2024-07-10 13:35:47,479 reranking models by 'multimer' metric 2024-07-10 13:35:48,656 Warning: importing 'simtk.openmm' is deprecated. Import 'openmm' instead. 2024-07-10 13:37:12,091 Relaxation took 84.6s 2024-07-10 13:37:12,091 rank_001_alphafold2_multimer_v3_model_3_seed_000 pLDDT=61.9 pTM=0.433 ipTM=0.195 2024-07-10 13:38:12,768 Relaxation took 60.7s 2024-07-10 13:38:12,768 rank_002_alphafold2_multimer_v3_model_4_seed_000 pLDDT=63 pTM=0.424 ipTM=0.16 2024-07-10 13:38:59,874 Relaxation took 47.1s 2024-07-10 13:38:59,874 rank_003_alphafold2_multimer_v3_model_1_seed_000 pLDDT=63.1 pTM=0.418 ipTM=0.16 2024-07-10 13:40:22,642 Relaxation took 82.8s 2024-07-10 13:40:22,642 rank_004_alphafold2_multimer_v3_model_2_seed_000 pLDDT=62.5 pTM=0.414 ipTM=0.154 2024-07-10 13:41:02,027 Relaxation took 39.4s 2024-07-10 13:41:02,027 rank_005_alphafold2_multimer_v3_model_5_seed_000 pLDDT=61.5 pTM=0.408 ipTM=0.133 2024-07-10 13:41:03,627 Done