2024-07-10 13:09:36,625 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3) 2024-07-10 13:09:36,961 Running on GPU 2024-07-10 13:09:40,702 Found 6 citations for tools or databases 2024-07-10 13:09:40,702 Query 1/1: GPCP1_CERKL (length 1230) 2024-07-10 13:09:41,177 Sleeping for 7s. Reason: PENDING 2024-07-10 13:09:48,595 Sleeping for 10s. Reason: RUNNING 2024-07-10 13:09:59,028 Sleeping for 6s. Reason: RUNNING 2024-07-10 13:10:05,483 Sleeping for 6s. Reason: RUNNING 2024-07-10 13:10:11,908 Sleeping for 5s. Reason: RUNNING 2024-07-10 13:10:17,326 Sleeping for 9s. Reason: RUNNING 2024-07-10 13:10:26,769 Sleeping for 6s. Reason: RUNNING 2024-07-10 13:10:33,214 Sleeping for 9s. Reason: RUNNING 2024-07-10 13:10:42,660 Sleeping for 7s. Reason: RUNNING 2024-07-10 13:10:50,080 Sleeping for 8s. Reason: RUNNING 2024-07-10 13:10:58,504 Sleeping for 5s. Reason: RUNNING 2024-07-10 13:11:03,929 Sleeping for 10s. Reason: RUNNING 2024-07-10 13:11:14,342 Sleeping for 5s. Reason: RUNNING 2024-07-10 13:11:19,767 Sleeping for 8s. Reason: RUNNING 2024-07-10 13:11:28,189 Sleeping for 6s. Reason: RUNNING 2024-07-10 13:11:35,379 Sleeping for 6s. Reason: RUNNING 2024-07-10 13:11:41,789 Sleeping for 7s. Reason: RUNNING 2024-07-10 13:11:49,251 Sleeping for 6s. Reason: RUNNING 2024-07-10 13:11:55,681 Sleeping for 5s. Reason: RUNNING 2024-07-10 13:12:01,103 Sleeping for 8s. Reason: RUNNING 2024-07-10 13:12:11,411 Sleeping for 8s. Reason: PENDING 2024-07-10 13:12:19,832 Sleeping for 7s. Reason: RUNNING 2024-07-10 13:12:27,249 Sleeping for 6s. Reason: RUNNING 2024-07-10 13:12:33,671 Sleeping for 7s. Reason: RUNNING 2024-07-10 13:12:41,099 Sleeping for 5s. Reason: RUNNING 2024-07-10 13:12:46,514 Sleeping for 9s. Reason: RUNNING 2024-07-10 13:12:55,927 Sleeping for 5s. Reason: RUNNING 2024-07-10 13:13:02,356 Sleeping for 8s. Reason: RUNNING 2024-07-10 13:13:10,799 Sleeping for 9s. Reason: RUNNING 2024-07-10 13:13:23,998 Setting max_seq=508, max_extra_seq=2048 2024-07-10 13:16:29,039 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=75.4 pTM=0.538 ipTM=0.172 2024-07-10 13:17:06,264 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=75.9 pTM=0.551 ipTM=0.188 tol=9.68 2024-07-10 13:17:43,542 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=77.6 pTM=0.636 ipTM=0.404 tol=8.83 2024-07-10 13:18:20,899 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=77.9 pTM=0.628 ipTM=0.331 tol=3.65 2024-07-10 13:18:58,401 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=77.1 pTM=0.567 ipTM=0.204 tol=3.04 2024-07-10 13:19:35,977 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=76.6 pTM=0.555 ipTM=0.176 tol=1.74 2024-07-10 13:20:13,564 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=76.6 pTM=0.557 ipTM=0.187 tol=1.75 2024-07-10 13:20:51,078 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=77.2 pTM=0.581 ipTM=0.275 tol=2.95 2024-07-10 13:21:28,563 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=77.4 pTM=0.603 ipTM=0.288 tol=1.96 2024-07-10 13:22:06,144 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=77 pTM=0.566 ipTM=0.22 tol=2.08 2024-07-10 13:22:43,834 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=76.8 pTM=0.555 ipTM=0.177 tol=1.56 2024-07-10 13:23:21,451 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=76.3 pTM=0.551 ipTM=0.168 tol=2.42 2024-07-10 13:23:59,065 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=76.5 pTM=0.554 ipTM=0.178 tol=2.39 2024-07-10 13:24:36,779 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=76.2 pTM=0.548 ipTM=0.156 tol=2.76 2024-07-10 13:25:14,533 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=76.1 pTM=0.546 ipTM=0.151 tol=2.49 2024-07-10 13:25:52,257 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=75.6 pTM=0.544 ipTM=0.148 tol=3.69 2024-07-10 13:26:29,903 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=75.6 pTM=0.543 ipTM=0.148 tol=5.18 2024-07-10 13:27:07,505 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=75.3 pTM=0.54 ipTM=0.149 tol=4.63 2024-07-10 13:27:45,191 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=75.6 pTM=0.542 ipTM=0.149 tol=2.22 2024-07-10 13:28:22,888 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=74.7 pTM=0.54 ipTM=0.149 tol=2.66 2024-07-10 13:29:00,459 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=75.1 pTM=0.54 ipTM=0.154 tol=2.07 2024-07-10 13:29:38,087 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=75.3 pTM=0.541 ipTM=0.158 tol=2.86 2024-07-10 13:30:15,683 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=75.2 pTM=0.542 ipTM=0.156 tol=1.92 2024-07-10 13:30:53,268 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=75.5 pTM=0.545 ipTM=0.163 tol=2.63 2024-07-10 13:31:30,842 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=75.1 pTM=0.54 ipTM=0.157 tol=1.43 2024-07-10 13:32:08,427 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=75.2 pTM=0.542 ipTM=0.162 tol=1.96 2024-07-10 13:32:46,064 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=75.2 pTM=0.54 ipTM=0.158 tol=2.17 2024-07-10 13:33:23,662 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=75.1 pTM=0.54 ipTM=0.152 tol=1.71 2024-07-10 13:34:01,391 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=74.6 pTM=0.537 ipTM=0.15 tol=4.01 2024-07-10 13:34:38,997 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=75.4 pTM=0.542 ipTM=0.157 tol=4.72 2024-07-10 13:35:16,649 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=75.1 pTM=0.538 ipTM=0.147 tol=5.41 2024-07-10 13:35:16,651 alphafold2_multimer_v3_model_1_seed_000 took 1307.6s (30 recycles) 2024-07-10 13:35:55,243 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=75.6 pTM=0.545 ipTM=0.171 2024-07-10 13:36:32,980 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=76.6 pTM=0.545 ipTM=0.157 tol=7.3 2024-07-10 13:37:10,752 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=76.6 pTM=0.543 ipTM=0.156 tol=7.14 2024-07-10 13:37:48,442 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=76.5 pTM=0.544 ipTM=0.152 tol=4.84 2024-07-10 13:38:26,111 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=77.1 pTM=0.548 ipTM=0.16 tol=3.44 2024-07-10 13:39:03,810 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=76.8 pTM=0.548 ipTM=0.159 tol=3.25 2024-07-10 13:39:41,501 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=76.8 pTM=0.549 ipTM=0.169 tol=2.06 2024-07-10 13:40:19,153 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=77 pTM=0.549 ipTM=0.168 tol=2.12 2024-07-10 13:40:56,778 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=77 pTM=0.55 ipTM=0.172 tol=2.58 2024-07-10 13:41:34,489 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=76.6 pTM=0.546 ipTM=0.159 tol=1.33 2024-07-10 13:42:12,168 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=77.1 pTM=0.55 ipTM=0.168 tol=1.63 2024-07-10 13:42:49,780 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=76.9 pTM=0.547 ipTM=0.162 tol=1.48 2024-07-10 13:43:27,364 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=76.9 pTM=0.548 ipTM=0.168 tol=2.15 2024-07-10 13:44:04,978 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=76.9 pTM=0.548 ipTM=0.162 tol=2.32 2024-07-10 13:44:42,602 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=76.9 pTM=0.55 ipTM=0.17 tol=1.29 2024-07-10 13:45:20,264 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=76.8 pTM=0.546 ipTM=0.163 tol=1.63 2024-07-10 13:45:57,891 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=76.6 pTM=0.55 ipTM=0.174 tol=1.52 2024-07-10 13:46:35,566 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=76.6 pTM=0.547 ipTM=0.166 tol=2.3 2024-07-10 13:47:13,261 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=76.5 pTM=0.547 ipTM=0.167 tol=2.06 2024-07-10 13:47:50,982 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=76.6 pTM=0.548 ipTM=0.164 tol=1.98 2024-07-10 13:48:28,610 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=76.7 pTM=0.549 ipTM=0.166 tol=1.76 2024-07-10 13:49:06,224 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=76.9 pTM=0.549 ipTM=0.172 tol=3.63 2024-07-10 13:49:43,901 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=76.7 pTM=0.547 ipTM=0.162 tol=3.42 2024-07-10 13:50:21,562 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=76.7 pTM=0.546 ipTM=0.161 tol=1.81 2024-07-10 13:50:59,149 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=76.9 pTM=0.545 ipTM=0.156 tol=4.21 2024-07-10 13:51:36,736 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=76.7 pTM=0.544 ipTM=0.16 tol=1.64 2024-07-10 13:52:14,282 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=76.8 pTM=0.545 ipTM=0.158 tol=3.22 2024-07-10 13:52:51,866 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=76.8 pTM=0.544 ipTM=0.158 tol=2.28 2024-07-10 13:53:29,421 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=76.8 pTM=0.545 ipTM=0.157 tol=2.6 2024-07-10 13:54:07,040 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=76.8 pTM=0.543 ipTM=0.158 tol=1.76 2024-07-10 13:54:44,606 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=76.6 pTM=0.543 ipTM=0.158 tol=1.55 2024-07-10 13:54:44,607 alphafold2_multimer_v3_model_2_seed_000 took 1167.0s (30 recycles) 2024-07-10 13:55:23,185 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=74.3 pTM=0.535 ipTM=0.163 2024-07-10 13:56:00,999 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=75.7 pTM=0.541 ipTM=0.15 tol=13.3 2024-07-10 13:56:38,679 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=75.8 pTM=0.542 ipTM=0.144 tol=7.55 2024-07-10 13:57:16,301 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=75.2 pTM=0.54 ipTM=0.147 tol=8.09 2024-07-10 13:57:53,915 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=75.1 pTM=0.541 ipTM=0.147 tol=5.73 2024-07-10 13:58:31,551 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=75.2 pTM=0.542 ipTM=0.145 tol=7.66 2024-07-10 13:59:09,197 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=75 pTM=0.542 ipTM=0.148 tol=5.3 2024-07-10 13:59:46,792 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=75.1 pTM=0.543 ipTM=0.145 tol=3.17 2024-07-10 14:00:24,379 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=75 pTM=0.541 ipTM=0.151 tol=6.07 2024-07-10 14:01:02,013 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=75.1 pTM=0.543 ipTM=0.147 tol=2.51 2024-07-10 14:01:39,648 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=75.1 pTM=0.541 ipTM=0.148 tol=4.25 2024-07-10 14:02:17,253 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=75.2 pTM=0.54 ipTM=0.151 tol=5.4 2024-07-10 14:02:54,884 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=74.9 pTM=0.54 ipTM=0.15 tol=5.09 2024-07-10 14:03:32,557 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=75 pTM=0.54 ipTM=0.147 tol=4.98 2024-07-10 14:04:10,222 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=74.9 pTM=0.54 ipTM=0.151 tol=6.43 2024-07-10 14:04:47,909 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=74.8 pTM=0.539 ipTM=0.151 tol=3.4 2024-07-10 14:05:25,553 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=74.9 pTM=0.539 ipTM=0.149 tol=3.77 2024-07-10 14:06:03,219 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=75 pTM=0.538 ipTM=0.148 tol=2.61 2024-07-10 14:06:40,896 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=74.7 pTM=0.539 ipTM=0.154 tol=2.66 2024-07-10 14:07:18,624 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=74.4 pTM=0.537 ipTM=0.147 tol=5.94 2024-07-10 14:07:56,242 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=74.5 pTM=0.538 ipTM=0.153 tol=3.98 2024-07-10 14:08:33,873 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=74.5 pTM=0.538 ipTM=0.147 tol=6 2024-07-10 14:09:11,568 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=74.7 pTM=0.537 ipTM=0.148 tol=3.22 2024-07-10 14:09:49,232 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=74.7 pTM=0.538 ipTM=0.15 tol=2.28 2024-07-10 14:10:26,850 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=74.8 pTM=0.538 ipTM=0.152 tol=3.86 2024-07-10 14:11:04,455 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=74.6 pTM=0.538 ipTM=0.155 tol=3.71 2024-07-10 14:11:42,073 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=74.6 pTM=0.537 ipTM=0.151 tol=2.41 2024-07-10 14:12:19,692 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=74.6 pTM=0.538 ipTM=0.154 tol=1.83 2024-07-10 14:12:57,379 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=74.7 pTM=0.537 ipTM=0.15 tol=2.4 2024-07-10 14:13:35,040 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=74.6 pTM=0.537 ipTM=0.148 tol=3.31 2024-07-10 14:14:12,660 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=74.6 pTM=0.536 ipTM=0.152 tol=2.62 2024-07-10 14:14:12,661 alphafold2_multimer_v3_model_3_seed_000 took 1167.1s (30 recycles) 2024-07-10 14:14:51,101 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=75.1 pTM=0.653 ipTM=0.512 2024-07-10 14:15:28,844 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=76.4 pTM=0.543 ipTM=0.149 tol=13.4 2024-07-10 14:16:06,624 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=76.5 pTM=0.545 ipTM=0.149 tol=7.25 2024-07-10 14:16:44,245 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=76.3 pTM=0.552 ipTM=0.169 tol=7.66 2024-07-10 14:17:21,851 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=76.2 pTM=0.556 ipTM=0.184 tol=2.2 2024-07-10 14:17:59,448 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=75.9 pTM=0.559 ipTM=0.188 tol=3.1 2024-07-10 14:18:37,029 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=75.5 pTM=0.558 ipTM=0.202 tol=2.17 2024-07-10 14:19:14,617 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=75.6 pTM=0.557 ipTM=0.196 tol=2.12 2024-07-10 14:19:52,204 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=75.9 pTM=0.558 ipTM=0.201 tol=2.55 2024-07-10 14:20:29,850 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=75.7 pTM=0.558 ipTM=0.194 tol=3.22 2024-07-10 14:21:07,479 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=75.6 pTM=0.557 ipTM=0.2 tol=3.57 2024-07-10 14:21:45,081 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=75.9 pTM=0.557 ipTM=0.193 tol=3.79 2024-07-10 14:22:22,747 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=75.6 pTM=0.555 ipTM=0.19 tol=2.71 2024-07-10 14:23:00,338 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=75.6 pTM=0.556 ipTM=0.199 tol=3.04 2024-07-10 14:23:37,931 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=75.1 pTM=0.546 ipTM=0.184 tol=5.23 2024-07-10 14:24:15,521 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=75.3 pTM=0.549 ipTM=0.189 tol=4.16 2024-07-10 14:24:53,077 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=75.4 pTM=0.553 ipTM=0.195 tol=7.3 2024-07-10 14:25:30,630 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=75.8 pTM=0.552 ipTM=0.191 tol=3.29 2024-07-10 14:26:08,135 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=75.6 pTM=0.567 ipTM=0.23 tol=1.9 2024-07-10 14:26:45,701 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=75.2 pTM=0.558 ipTM=0.196 tol=2.31 2024-07-10 14:27:23,236 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=75.2 pTM=0.554 ipTM=0.196 tol=3.42 2024-07-10 14:28:00,744 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=75.1 pTM=0.552 ipTM=0.191 tol=4.17 2024-07-10 14:28:38,222 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=75.4 pTM=0.559 ipTM=0.215 tol=2.27 2024-07-10 14:29:15,707 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=75.1 pTM=0.552 ipTM=0.19 tol=1.91 2024-07-10 14:29:53,188 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=75.6 pTM=0.566 ipTM=0.246 tol=2.68 2024-07-10 14:30:30,685 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=75.2 pTM=0.557 ipTM=0.199 tol=1.46 2024-07-10 14:31:08,203 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=75.1 pTM=0.555 ipTM=0.208 tol=1.38 2024-07-10 14:31:45,706 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=75 pTM=0.556 ipTM=0.206 tol=3.06 2024-07-10 14:32:23,262 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=74.2 pTM=0.561 ipTM=0.228 tol=8.83 2024-07-10 14:33:00,786 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=74.6 pTM=0.552 ipTM=0.195 tol=9.1 2024-07-10 14:33:38,316 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=75.1 pTM=0.552 ipTM=0.199 tol=1.05 2024-07-10 14:33:38,317 alphafold2_multimer_v3_model_4_seed_000 took 1164.7s (30 recycles) 2024-07-10 14:34:16,813 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=74 pTM=0.533 ipTM=0.17 2024-07-10 14:34:54,453 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=75.6 pTM=0.543 ipTM=0.156 tol=6.88 2024-07-10 14:35:32,110 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=75.7 pTM=0.544 ipTM=0.147 tol=4.59 2024-07-10 14:36:09,771 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=75.9 pTM=0.544 ipTM=0.146 tol=4.14 2024-07-10 14:36:47,434 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=75.8 pTM=0.544 ipTM=0.15 tol=4.43 2024-07-10 14:37:25,096 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=75.7 pTM=0.544 ipTM=0.146 tol=2.38 2024-07-10 14:38:02,744 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=75.6 pTM=0.543 ipTM=0.148 tol=4 2024-07-10 14:38:40,386 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=75.5 pTM=0.542 ipTM=0.152 tol=3.96 2024-07-10 14:39:18,080 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=75.4 pTM=0.542 ipTM=0.149 tol=1.97 2024-07-10 14:39:55,749 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=75.6 pTM=0.544 ipTM=0.147 tol=4.03 2024-07-10 14:40:33,373 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=75.5 pTM=0.543 ipTM=0.15 tol=2.2 2024-07-10 14:41:11,040 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=75.5 pTM=0.542 ipTM=0.147 tol=3.79 2024-07-10 14:41:48,738 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=75.4 pTM=0.542 ipTM=0.148 tol=3.11 2024-07-10 14:42:26,383 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=75.2 pTM=0.542 ipTM=0.15 tol=3.01 2024-07-10 14:43:04,024 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=75.4 pTM=0.542 ipTM=0.15 tol=3.1 2024-07-10 14:43:41,662 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=75.2 pTM=0.541 ipTM=0.15 tol=3.87 2024-07-10 14:44:19,314 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=75.2 pTM=0.541 ipTM=0.148 tol=3.18 2024-07-10 14:44:56,960 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=75.4 pTM=0.542 ipTM=0.148 tol=4.04 2024-07-10 14:45:34,591 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=75.2 pTM=0.542 ipTM=0.153 tol=2.4 2024-07-10 14:46:12,228 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=75.1 pTM=0.541 ipTM=0.146 tol=2.1 2024-07-10 14:46:49,915 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=74.9 pTM=0.54 ipTM=0.147 tol=2.04 2024-07-10 14:47:27,536 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=74.9 pTM=0.539 ipTM=0.149 tol=2.86 2024-07-10 14:48:05,163 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=75.4 pTM=0.543 ipTM=0.152 tol=3.48 2024-07-10 14:48:42,792 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=75.4 pTM=0.542 ipTM=0.151 tol=4.42 2024-07-10 14:49:20,397 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=75.4 pTM=0.544 ipTM=0.155 tol=3.22 2024-07-10 14:49:58,026 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=75 pTM=0.54 ipTM=0.148 tol=3.95 2024-07-10 14:50:35,668 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=74.8 pTM=0.538 ipTM=0.147 tol=3.78 2024-07-10 14:51:13,300 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=74.9 pTM=0.54 ipTM=0.148 tol=6.64 2024-07-10 14:51:50,881 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=74.8 pTM=0.54 ipTM=0.153 tol=5.79 2024-07-10 14:52:28,436 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=75 pTM=0.54 ipTM=0.155 tol=4.68 2024-07-10 14:53:05,934 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=75 pTM=0.543 ipTM=0.164 tol=3.78 2024-07-10 14:53:05,935 alphafold2_multimer_v3_model_5_seed_000 took 1166.7s (30 recycles) 2024-07-10 14:53:06,865 reranking models by 'multimer' metric 2024-07-10 14:53:10,360 Warning: importing 'simtk.openmm' is deprecated. Import 'openmm' instead. 2024-07-10 14:56:09,226 Relaxation took 182.4s 2024-07-10 14:56:09,226 rank_001_alphafold2_multimer_v3_model_4_seed_000 pLDDT=75.1 pTM=0.552 ipTM=0.199 2024-07-10 14:58:32,682 Relaxation took 143.5s 2024-07-10 14:58:32,682 rank_002_alphafold2_multimer_v3_model_5_seed_000 pLDDT=75 pTM=0.543 ipTM=0.164 2024-07-10 15:02:19,982 Relaxation took 227.3s 2024-07-10 15:02:19,982 rank_003_alphafold2_multimer_v3_model_2_seed_000 pLDDT=76.6 pTM=0.543 ipTM=0.158 2024-07-10 15:04:31,158 Relaxation took 131.2s 2024-07-10 15:04:31,158 rank_004_alphafold2_multimer_v3_model_3_seed_000 pLDDT=74.6 pTM=0.536 ipTM=0.152 2024-07-10 15:06:35,986 Relaxation took 124.8s 2024-07-10 15:06:35,986 rank_005_alphafold2_multimer_v3_model_1_seed_000 pLDDT=75.1 pTM=0.538 ipTM=0.147 2024-07-10 15:06:38,437 Done