2024-07-10 13:55:00,353 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3)
2024-07-10 13:55:00,678 Running on GPU
2024-07-10 13:55:04,424 Found 6 citations for tools or databases
2024-07-10 13:55:04,424 Query 1/1: GRHL1_DHB14 (length 888)
2024-07-10 13:55:04,873 Sleeping for 6s. Reason: PENDING
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2024-07-10 13:57:07,569 Sleeping for 8s. Reason: RUNNING
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2024-07-10 13:57:39,646 Sleeping for 9s. Reason: RUNNING
2024-07-10 13:57:49,064 Sleeping for 5s. Reason: RUNNING
2024-07-10 13:57:54,489 Sleeping for 6s. Reason: RUNNING
2024-07-10 13:58:21,541 Sleeping for 7s. Reason: PENDING
2024-07-10 13:58:30,097 Sleeping for 5s. Reason: RUNNING
2024-07-10 13:58:35,517 Sleeping for 6s. Reason: RUNNING
2024-07-10 13:58:41,930 Sleeping for 7s. Reason: RUNNING
2024-07-10 13:58:49,365 Sleeping for 10s. Reason: RUNNING
2024-07-10 13:58:59,793 Sleeping for 5s. Reason: RUNNING
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2024-07-10 13:59:15,625 Sleeping for 6s. Reason: RUNNING
2024-07-10 13:59:22,050 Sleeping for 7s. Reason: RUNNING
2024-07-10 13:59:30,621 Sleeping for 10s. Reason: RUNNING
2024-07-10 13:59:41,566 Sleeping for 7s. Reason: RUNNING
2024-07-10 13:59:49,023 Sleeping for 8s. Reason: RUNNING
2024-07-10 13:59:57,464 Sleeping for 10s. Reason: RUNNING
2024-07-10 14:00:07,905 Sleeping for 8s. Reason: RUNNING
2024-07-10 14:00:17,127 Sleeping for 8s. Reason: RUNNING
2024-07-10 14:00:25,566 Sleeping for 9s. Reason: RUNNING
2024-07-10 14:00:34,988 Sleeping for 8s. Reason: RUNNING
2024-07-10 14:00:43,412 Sleeping for 6s. Reason: RUNNING
2024-07-10 14:00:49,851 Sleeping for 7s. Reason: RUNNING
2024-07-10 14:00:57,271 Sleeping for 6s. Reason: RUNNING
2024-07-10 14:01:03,708 Sleeping for 8s. Reason: RUNNING
2024-07-10 14:01:15,164 Setting max_seq=508, max_extra_seq=2048
2024-07-10 14:03:24,804 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=60.9 pTM=0.367 ipTM=0.134
2024-07-10 14:03:40,002 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=60.9 pTM=0.363 ipTM=0.133 tol=15.2
2024-07-10 14:03:55,208 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=60.6 pTM=0.364 ipTM=0.136 tol=9.59
2024-07-10 14:04:10,433 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=61 pTM=0.365 ipTM=0.139 tol=6.44
2024-07-10 14:04:25,675 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=61.1 pTM=0.365 ipTM=0.144 tol=8.05
2024-07-10 14:04:40,956 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=61.3 pTM=0.367 ipTM=0.149 tol=5.65
2024-07-10 14:04:56,212 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=61.4 pTM=0.368 ipTM=0.147 tol=6.32
2024-07-10 14:05:11,475 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=61.4 pTM=0.37 ipTM=0.154 tol=4.55
2024-07-10 14:05:26,751 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=61.8 pTM=0.371 ipTM=0.147 tol=4.1
2024-07-10 14:05:42,026 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=61.8 pTM=0.373 ipTM=0.153 tol=2.92
2024-07-10 14:05:57,297 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=61.7 pTM=0.371 ipTM=0.146 tol=5.25
2024-07-10 14:06:12,578 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=62.1 pTM=0.375 ipTM=0.161 tol=4.23
2024-07-10 14:06:27,857 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=61.8 pTM=0.371 ipTM=0.15 tol=3.69
2024-07-10 14:06:43,143 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=61.8 pTM=0.373 ipTM=0.158 tol=2.74
2024-07-10 14:06:58,427 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=61.7 pTM=0.371 ipTM=0.152 tol=2.41
2024-07-10 14:07:13,705 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=61.8 pTM=0.375 ipTM=0.159 tol=4.31
2024-07-10 14:07:28,995 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=61.8 pTM=0.372 ipTM=0.153 tol=2.55
2024-07-10 14:07:44,281 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=61.8 pTM=0.375 ipTM=0.159 tol=2.2
2024-07-10 14:07:59,568 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=61.7 pTM=0.373 ipTM=0.151 tol=3.5
2024-07-10 14:08:14,857 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=61.6 pTM=0.374 ipTM=0.159 tol=3.09
2024-07-10 14:08:30,144 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=61.7 pTM=0.372 ipTM=0.149 tol=4.1
2024-07-10 14:08:45,431 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=61.7 pTM=0.374 ipTM=0.159 tol=3.44
2024-07-10 14:09:00,723 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=61.7 pTM=0.373 ipTM=0.155 tol=2.06
2024-07-10 14:09:16,010 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=61.8 pTM=0.372 ipTM=0.155 tol=1.87
2024-07-10 14:09:31,296 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=61.6 pTM=0.372 ipTM=0.154 tol=1.08
2024-07-10 14:09:46,585 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=61.6 pTM=0.373 ipTM=0.156 tol=1.41
2024-07-10 14:10:01,868 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=61.7 pTM=0.372 ipTM=0.155 tol=1.99
2024-07-10 14:10:17,156 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=61.8 pTM=0.372 ipTM=0.153 tol=1.61
2024-07-10 14:10:32,446 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=61.8 pTM=0.374 ipTM=0.159 tol=1.88
2024-07-10 14:10:47,730 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=61.7 pTM=0.374 ipTM=0.156 tol=1.88
2024-07-10 14:11:03,017 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=61.8 pTM=0.373 ipTM=0.155 tol=2.22
2024-07-10 14:11:03,017 alphafold2_multimer_v3_model_1_seed_000 took 582.6s (30 recycles)
2024-07-10 14:11:18,792 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=60.7 pTM=0.366 ipTM=0.138
2024-07-10 14:11:34,114 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=61.3 pTM=0.362 ipTM=0.155 tol=11.8
2024-07-10 14:11:49,444 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=62.1 pTM=0.365 ipTM=0.15 tol=6.15
2024-07-10 14:12:04,789 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=62.4 pTM=0.364 ipTM=0.144 tol=4.71
2024-07-10 14:12:20,139 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=62.1 pTM=0.365 ipTM=0.14 tol=3.22
2024-07-10 14:12:35,496 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=62.6 pTM=0.367 ipTM=0.14 tol=4.18
2024-07-10 14:12:50,858 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=62.4 pTM=0.367 ipTM=0.144 tol=5.79
2024-07-10 14:13:06,209 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=62.7 pTM=0.367 ipTM=0.141 tol=4.73
2024-07-10 14:13:21,562 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=62.6 pTM=0.367 ipTM=0.141 tol=4.44
2024-07-10 14:13:36,912 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=62.5 pTM=0.368 ipTM=0.134 tol=4.02
2024-07-10 14:13:52,257 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=62.5 pTM=0.37 ipTM=0.137 tol=2.71
2024-07-10 14:14:07,602 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=62.6 pTM=0.371 ipTM=0.138 tol=3.34
2024-07-10 14:14:22,935 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=62.6 pTM=0.37 ipTM=0.141 tol=4.43
2024-07-10 14:14:38,281 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=62.6 pTM=0.37 ipTM=0.149 tol=2.81
2024-07-10 14:14:53,628 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=62.6 pTM=0.37 ipTM=0.149 tol=2.59
2024-07-10 14:15:08,960 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=62.5 pTM=0.37 ipTM=0.143 tol=1.9
2024-07-10 14:15:24,309 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=62.6 pTM=0.37 ipTM=0.138 tol=2.22
2024-07-10 14:15:39,653 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=62.5 pTM=0.37 ipTM=0.138 tol=3.58
2024-07-10 14:15:54,983 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=62.5 pTM=0.371 ipTM=0.138 tol=2.73
2024-07-10 14:16:10,328 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=62.7 pTM=0.369 ipTM=0.141 tol=3.62
2024-07-10 14:16:25,660 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=62.6 pTM=0.37 ipTM=0.142 tol=3.99
2024-07-10 14:16:41,001 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=62.8 pTM=0.372 ipTM=0.142 tol=5.26
2024-07-10 14:16:56,343 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=62.6 pTM=0.37 ipTM=0.137 tol=3.46
2024-07-10 14:17:11,688 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=62.5 pTM=0.369 ipTM=0.139 tol=6.57
2024-07-10 14:17:27,042 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=62.6 pTM=0.369 ipTM=0.143 tol=2.89
2024-07-10 14:17:42,381 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=62.5 pTM=0.369 ipTM=0.138 tol=4.15
2024-07-10 14:17:57,725 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=62.5 pTM=0.37 ipTM=0.143 tol=4.23
2024-07-10 14:18:13,062 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=62.3 pTM=0.369 ipTM=0.142 tol=3.31
2024-07-10 14:18:28,400 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=62.6 pTM=0.37 ipTM=0.14 tol=3.55
2024-07-10 14:18:43,730 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=62.8 pTM=0.37 ipTM=0.137 tol=2.18
2024-07-10 14:18:59,066 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=62.8 pTM=0.369 ipTM=0.135 tol=1.6
2024-07-10 14:18:59,067 alphafold2_multimer_v3_model_2_seed_000 took 475.6s (30 recycles)
2024-07-10 14:19:14,892 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=59.9 pTM=0.371 ipTM=0.155
2024-07-10 14:19:30,250 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=60.7 pTM=0.364 ipTM=0.153 tol=11.6
2024-07-10 14:19:45,608 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=60.4 pTM=0.369 ipTM=0.159 tol=5.48
2024-07-10 14:20:00,988 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=59.7 pTM=0.373 ipTM=0.161 tol=13.1
2024-07-10 14:20:16,333 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=59.8 pTM=0.377 ipTM=0.171 tol=7.24
2024-07-10 14:20:31,669 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=60.1 pTM=0.379 ipTM=0.178 tol=5.14
2024-07-10 14:20:46,996 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=60.1 pTM=0.378 ipTM=0.174 tol=2.47
2024-07-10 14:21:02,315 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=60.2 pTM=0.38 ipTM=0.179 tol=1.97
2024-07-10 14:21:17,626 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=60 pTM=0.381 ipTM=0.177 tol=2.51
2024-07-10 14:21:32,943 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=60.4 pTM=0.38 ipTM=0.176 tol=2.13
2024-07-10 14:21:48,257 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=60.1 pTM=0.381 ipTM=0.179 tol=1.92
2024-07-10 14:22:03,567 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=60.2 pTM=0.383 ipTM=0.184 tol=1.42
2024-07-10 14:22:18,877 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=60.1 pTM=0.382 ipTM=0.182 tol=1.77
2024-07-10 14:22:34,193 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=60.2 pTM=0.382 ipTM=0.182 tol=1.91
2024-07-10 14:22:49,513 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=60.1 pTM=0.379 ipTM=0.18 tol=2.71
2024-07-10 14:23:04,838 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=60.2 pTM=0.383 ipTM=0.187 tol=2.79
2024-07-10 14:23:20,172 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=60.2 pTM=0.378 ipTM=0.178 tol=4.46
2024-07-10 14:23:35,476 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=60.1 pTM=0.381 ipTM=0.185 tol=1.8
2024-07-10 14:23:50,810 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=60.2 pTM=0.378 ipTM=0.176 tol=3.31
2024-07-10 14:24:06,132 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=59.9 pTM=0.382 ipTM=0.183 tol=2.01
2024-07-10 14:24:21,457 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=59.9 pTM=0.379 ipTM=0.179 tol=2.38
2024-07-10 14:24:36,770 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=60 pTM=0.382 ipTM=0.182 tol=1.76
2024-07-10 14:24:52,101 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=60 pTM=0.378 ipTM=0.177 tol=1.29
2024-07-10 14:25:07,432 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=60 pTM=0.382 ipTM=0.184 tol=1.5
2024-07-10 14:25:22,765 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=60 pTM=0.379 ipTM=0.178 tol=2.29
2024-07-10 14:25:38,102 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=60 pTM=0.382 ipTM=0.184 tol=1.65
2024-07-10 14:25:53,440 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=59.9 pTM=0.381 ipTM=0.181 tol=1.34
2024-07-10 14:26:08,778 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=59.9 pTM=0.384 ipTM=0.183 tol=1.33
2024-07-10 14:26:24,103 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=59.8 pTM=0.381 ipTM=0.182 tol=1.38
2024-07-10 14:26:39,437 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=59.8 pTM=0.383 ipTM=0.188 tol=1.33
2024-07-10 14:26:54,778 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=59.9 pTM=0.383 ipTM=0.183 tol=1.23
2024-07-10 14:26:54,778 alphafold2_multimer_v3_model_3_seed_000 took 475.2s (30 recycles)
2024-07-10 14:27:10,635 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=60.2 pTM=0.383 ipTM=0.164
2024-07-10 14:27:25,969 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=59.8 pTM=0.375 ipTM=0.179 tol=14.5
2024-07-10 14:27:41,344 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=60.2 pTM=0.377 ipTM=0.183 tol=9.46
2024-07-10 14:27:56,689 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=60.3 pTM=0.379 ipTM=0.182 tol=4.97
2024-07-10 14:28:12,034 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=60.3 pTM=0.384 ipTM=0.192 tol=5.84
2024-07-10 14:28:27,388 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=60.6 pTM=0.383 ipTM=0.186 tol=6.55
2024-07-10 14:28:42,744 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=60.7 pTM=0.383 ipTM=0.185 tol=4.88
2024-07-10 14:28:58,094 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=60.6 pTM=0.384 ipTM=0.19 tol=4.05
2024-07-10 14:29:13,447 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=60.6 pTM=0.383 ipTM=0.185 tol=2.1
2024-07-10 14:29:28,811 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=61 pTM=0.384 ipTM=0.187 tol=2.15
2024-07-10 14:29:44,173 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=60.8 pTM=0.382 ipTM=0.184 tol=2.21
2024-07-10 14:29:59,530 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=60.8 pTM=0.386 ipTM=0.193 tol=4.77
2024-07-10 14:30:14,884 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=60.6 pTM=0.381 ipTM=0.18 tol=5.03
2024-07-10 14:30:30,242 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=60.7 pTM=0.385 ipTM=0.188 tol=1.79
2024-07-10 14:30:45,599 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=60.4 pTM=0.382 ipTM=0.182 tol=1.75
2024-07-10 14:31:00,956 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=60.7 pTM=0.387 ipTM=0.194 tol=1.27
2024-07-10 14:31:16,327 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=60.8 pTM=0.382 ipTM=0.181 tol=5.14
2024-07-10 14:31:31,689 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=60.5 pTM=0.385 ipTM=0.19 tol=5.35
2024-07-10 14:31:47,054 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=60.6 pTM=0.381 ipTM=0.178 tol=3.4
2024-07-10 14:32:02,421 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=60.3 pTM=0.387 ipTM=0.193 tol=6.39
2024-07-10 14:32:17,789 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=60.3 pTM=0.384 ipTM=0.186 tol=5.11
2024-07-10 14:32:33,157 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=60.4 pTM=0.386 ipTM=0.189 tol=3.67
2024-07-10 14:32:48,527 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=60.5 pTM=0.385 ipTM=0.191 tol=3.69
2024-07-10 14:33:03,890 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=60.3 pTM=0.385 ipTM=0.191 tol=1.77
2024-07-10 14:33:19,266 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=60.6 pTM=0.385 ipTM=0.192 tol=1.53
2024-07-10 14:33:34,639 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=60.4 pTM=0.385 ipTM=0.19 tol=2.02
2024-07-10 14:33:50,019 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=60.3 pTM=0.385 ipTM=0.188 tol=2.64
2024-07-10 14:34:05,389 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=60.3 pTM=0.384 ipTM=0.185 tol=1.69
2024-07-10 14:34:20,760 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=60.4 pTM=0.386 ipTM=0.194 tol=1.75
2024-07-10 14:34:36,130 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=60.5 pTM=0.385 ipTM=0.187 tol=1.1
2024-07-10 14:34:51,498 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=60.4 pTM=0.387 ipTM=0.193 tol=1.82
2024-07-10 14:34:51,499 alphafold2_multimer_v3_model_4_seed_000 took 476.2s (30 recycles)
2024-07-10 14:35:07,315 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=59.2 pTM=0.382 ipTM=0.182
2024-07-10 14:35:22,692 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=61 pTM=0.362 ipTM=0.14 tol=17.4
2024-07-10 14:35:38,042 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=61.4 pTM=0.365 ipTM=0.149 tol=12.1
2024-07-10 14:35:53,400 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=61.6 pTM=0.366 ipTM=0.153 tol=7.53
2024-07-10 14:36:08,763 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=61.5 pTM=0.367 ipTM=0.158 tol=5.4
2024-07-10 14:36:24,117 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=61.7 pTM=0.369 ipTM=0.163 tol=3.05
2024-07-10 14:36:39,487 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=61.7 pTM=0.368 ipTM=0.162 tol=3
2024-07-10 14:36:54,852 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=61.9 pTM=0.37 ipTM=0.16 tol=2.38
2024-07-10 14:37:10,215 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=61.9 pTM=0.37 ipTM=0.16 tol=4.23
2024-07-10 14:37:25,578 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=61.8 pTM=0.369 ipTM=0.158 tol=3.85
2024-07-10 14:37:40,938 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=61.5 pTM=0.371 ipTM=0.156 tol=5.87
2024-07-10 14:37:56,309 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=61.7 pTM=0.37 ipTM=0.161 tol=4.69
2024-07-10 14:38:11,678 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=61.6 pTM=0.369 ipTM=0.162 tol=6.18
2024-07-10 14:38:27,049 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=61.8 pTM=0.37 ipTM=0.161 tol=3.83
2024-07-10 14:38:42,424 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=61.7 pTM=0.369 ipTM=0.161 tol=4.96
2024-07-10 14:38:57,787 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=61.7 pTM=0.371 ipTM=0.161 tol=4
2024-07-10 14:39:13,157 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=61.7 pTM=0.368 ipTM=0.159 tol=6.7
2024-07-10 14:39:28,520 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=61.7 pTM=0.37 ipTM=0.159 tol=7.23
2024-07-10 14:39:43,886 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=61.8 pTM=0.37 ipTM=0.159 tol=2.49
2024-07-10 14:39:59,254 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=61.6 pTM=0.37 ipTM=0.161 tol=5.97
2024-07-10 14:40:14,618 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=61.5 pTM=0.371 ipTM=0.162 tol=5.37
2024-07-10 14:40:29,979 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=61.5 pTM=0.37 ipTM=0.156 tol=5.47
2024-07-10 14:40:45,330 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=61.6 pTM=0.37 ipTM=0.159 tol=7.02
2024-07-10 14:41:00,683 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=61.5 pTM=0.372 ipTM=0.167 tol=6.91
2024-07-10 14:41:16,030 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=61.4 pTM=0.372 ipTM=0.163 tol=5.59
2024-07-10 14:41:31,377 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=61.4 pTM=0.373 ipTM=0.164 tol=5.71
2024-07-10 14:41:46,726 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=61.4 pTM=0.371 ipTM=0.163 tol=4.63
2024-07-10 14:42:02,075 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=61.4 pTM=0.372 ipTM=0.164 tol=4.1
2024-07-10 14:42:17,431 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=61.3 pTM=0.375 ipTM=0.176 tol=5.34
2024-07-10 14:42:32,777 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=61.3 pTM=0.372 ipTM=0.164 tol=3.68
2024-07-10 14:42:48,122 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=61.3 pTM=0.375 ipTM=0.17 tol=2.87
2024-07-10 14:42:48,122 alphafold2_multimer_v3_model_5_seed_000 took 476.1s (30 recycles)
2024-07-10 14:42:48,616 reranking models by 'multimer' metric
2024-07-10 14:42:51,829 Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
2024-07-10 14:43:52,219 Relaxation took 63.6s
2024-07-10 14:43:52,219 rank_001_alphafold2_multimer_v3_model_4_seed_000 pLDDT=60.4 pTM=0.387 ipTM=0.193
2024-07-10 14:45:03,762 Relaxation took 71.5s
2024-07-10 14:45:03,762 rank_002_alphafold2_multimer_v3_model_3_seed_000 pLDDT=59.9 pTM=0.383 ipTM=0.183
2024-07-10 14:46:07,059 Relaxation took 63.3s
2024-07-10 14:46:07,059 rank_003_alphafold2_multimer_v3_model_5_seed_000 pLDDT=61.3 pTM=0.375 ipTM=0.17
2024-07-10 14:47:12,498 Relaxation took 65.4s
2024-07-10 14:47:12,499 rank_004_alphafold2_multimer_v3_model_1_seed_000 pLDDT=61.8 pTM=0.373 ipTM=0.155
2024-07-10 14:48:19,843 Relaxation took 67.3s
2024-07-10 14:48:19,843 rank_005_alphafold2_multimer_v3_model_2_seed_000 pLDDT=62.8 pTM=0.369 ipTM=0.135
2024-07-10 14:48:21,353 Done