2024-07-10 14:01:52,221 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3) 2024-07-10 14:01:52,553 Running on GPU 2024-07-10 14:01:56,490 Found 6 citations for tools or databases 2024-07-10 14:01:56,490 Query 1/1: GRIK1_SOX (length 1308) 2024-07-10 14:01:56,998 Sleeping for 7s. Reason: PENDING 2024-07-10 14:02:04,417 Sleeping for 6s. Reason: RUNNING 2024-07-10 14:02:10,841 Sleeping for 7s. Reason: RUNNING 2024-07-10 14:02:18,261 Sleeping for 10s. Reason: RUNNING 2024-07-10 14:02:28,694 Sleeping for 10s. Reason: RUNNING 2024-07-10 14:02:39,612 Sleeping for 9s. Reason: RUNNING 2024-07-10 14:02:49,032 Sleeping for 5s. Reason: RUNNING 2024-07-10 14:02:54,448 Sleeping for 7s. Reason: RUNNING 2024-07-10 14:03:01,866 Sleeping for 6s. Reason: RUNNING 2024-07-10 14:03:08,285 Sleeping for 7s. Reason: RUNNING 2024-07-10 14:03:15,712 Sleeping for 9s. Reason: RUNNING 2024-07-10 14:03:25,130 Sleeping for 10s. Reason: RUNNING 2024-07-10 14:03:35,572 Sleeping for 9s. Reason: RUNNING 2024-07-10 14:03:44,992 Sleeping for 5s. Reason: RUNNING 2024-07-10 14:03:50,419 Sleeping for 9s. Reason: RUNNING 2024-07-10 14:03:59,862 Sleeping for 6s. Reason: RUNNING 2024-07-10 14:04:06,273 Sleeping for 10s. Reason: RUNNING 2024-07-10 14:04:17,181 Sleeping for 5s. Reason: RUNNING 2024-07-10 14:04:22,578 Sleeping for 6s. Reason: RUNNING 2024-07-10 14:04:29,032 Sleeping for 5s. Reason: RUNNING 2024-07-10 14:04:34,445 Sleeping for 6s. Reason: RUNNING 2024-07-10 14:04:40,870 Sleeping for 9s. Reason: RUNNING 2024-07-10 14:04:50,302 Sleeping for 5s. Reason: RUNNING 2024-07-10 14:04:55,719 Sleeping for 5s. Reason: RUNNING 2024-07-10 14:05:01,146 Sleeping for 10s. Reason: RUNNING 2024-07-10 14:05:11,751 Sleeping for 6s. Reason: RUNNING 2024-07-10 14:05:18,182 Sleeping for 9s. Reason: RUNNING 2024-07-10 14:05:27,594 Sleeping for 8s. Reason: RUNNING 2024-07-10 14:05:37,771 Sleeping for 8s. Reason: RUNNING 2024-07-10 14:05:46,180 Sleeping for 10s. Reason: RUNNING 2024-07-10 14:05:56,604 Sleeping for 9s. Reason: RUNNING 2024-07-10 14:06:06,045 Sleeping for 5s. Reason: RUNNING 2024-07-10 14:06:11,475 Sleeping for 6s. Reason: RUNNING 2024-07-10 14:06:17,908 Sleeping for 6s. Reason: RUNNING 2024-07-10 14:06:24,318 Sleeping for 5s. Reason: RUNNING 2024-07-10 14:06:30,871 Sleeping for 7s. Reason: RUNNING 2024-07-10 14:06:38,282 Sleeping for 8s. Reason: RUNNING 2024-07-10 14:06:47,193 Sleeping for 8s. Reason: RUNNING 2024-07-10 14:06:55,617 Sleeping for 6s. Reason: RUNNING 2024-07-10 14:07:03,068 Sleeping for 5s. Reason: RUNNING 2024-07-10 14:07:08,489 Sleeping for 8s. Reason: RUNNING 2024-07-10 14:07:16,902 Sleeping for 6s. Reason: RUNNING 2024-07-10 14:07:23,314 Sleeping for 8s. Reason: RUNNING 2024-07-10 14:07:31,728 Sleeping for 10s. Reason: RUNNING 2024-07-10 14:07:42,619 Sleeping for 6s. Reason: RUNNING 2024-07-10 14:07:49,040 Sleeping for 6s. Reason: RUNNING 2024-07-10 14:07:55,471 Sleeping for 10s. Reason: RUNNING 2024-07-10 14:08:37,988 Sleeping for 5s. Reason: PENDING 2024-07-10 14:08:43,462 Sleeping for 6s. Reason: RUNNING 2024-07-10 14:08:49,878 Sleeping for 5s. Reason: RUNNING 2024-07-10 14:08:55,297 Sleeping for 7s. Reason: RUNNING 2024-07-10 14:09:02,948 Sleeping for 8s. Reason: RUNNING 2024-07-10 14:09:11,377 Sleeping for 7s. Reason: RUNNING 2024-07-10 14:09:18,792 Sleeping for 9s. Reason: RUNNING 2024-07-10 14:09:28,254 Sleeping for 8s. Reason: RUNNING 2024-07-10 14:09:36,680 Sleeping for 9s. Reason: RUNNING 2024-07-10 14:09:46,098 Sleeping for 8s. Reason: RUNNING 2024-07-10 14:09:54,531 Sleeping for 7s. Reason: RUNNING 2024-07-10 14:10:01,951 Sleeping for 8s. Reason: RUNNING 2024-07-10 14:10:12,221 Sleeping for 6s. Reason: RUNNING 2024-07-10 14:10:18,643 Sleeping for 8s. Reason: RUNNING 2024-07-10 14:10:27,099 Sleeping for 9s. Reason: RUNNING 2024-07-10 14:10:36,525 Sleeping for 7s. Reason: RUNNING 2024-07-10 14:10:43,946 Sleeping for 8s. Reason: RUNNING 2024-07-10 14:10:52,394 Sleeping for 6s. Reason: RUNNING 2024-07-10 14:10:58,811 Sleeping for 7s. Reason: RUNNING 2024-07-10 14:11:06,236 Sleeping for 5s. Reason: RUNNING 2024-07-10 14:11:11,674 Sleeping for 5s. Reason: RUNNING 2024-07-10 14:11:17,112 Sleeping for 9s. Reason: RUNNING 2024-07-10 14:11:26,539 Sleeping for 9s. Reason: RUNNING 2024-07-10 14:11:35,971 Sleeping for 8s. Reason: RUNNING 2024-07-10 14:11:44,394 Sleeping for 8s. Reason: RUNNING 2024-07-10 14:11:53,959 Sleeping for 9s. Reason: RUNNING 2024-07-10 14:12:11,523 Setting max_seq=508, max_extra_seq=2048 2024-07-10 14:15:09,049 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=79.8 pTM=0.44 ipTM=0.219 2024-07-10 14:15:53,248 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=79.9 pTM=0.464 ipTM=0.297 tol=10.6 2024-07-10 14:16:37,532 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=80.9 pTM=0.552 ipTM=0.578 tol=3.53 2024-07-10 14:17:21,852 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=81.8 pTM=0.603 ipTM=0.745 tol=1.5 2024-07-10 14:18:06,185 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=81.8 pTM=0.612 ipTM=0.781 tol=0.483 2024-07-10 14:18:06,187 alphafold2_multimer_v3_model_1_seed_000 took 349.0s (4 recycles) 2024-07-10 14:18:51,633 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=78.3 pTM=0.441 ipTM=0.172 2024-07-10 14:19:36,094 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=79.7 pTM=0.436 ipTM=0.184 tol=8.67 2024-07-10 14:20:20,623 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=80.2 pTM=0.427 ipTM=0.156 tol=6.87 2024-07-10 14:21:05,206 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=80.9 pTM=0.426 ipTM=0.143 tol=10.2 2024-07-10 14:21:49,775 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=81.1 pTM=0.419 ipTM=0.146 tol=8.71 2024-07-10 14:22:34,372 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=81.3 pTM=0.421 ipTM=0.154 tol=6.11 2024-07-10 14:23:19,004 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=81.1 pTM=0.418 ipTM=0.158 tol=4.57 2024-07-10 14:24:03,603 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=81.3 pTM=0.417 ipTM=0.156 tol=2.91 2024-07-10 14:24:48,185 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=81.4 pTM=0.417 ipTM=0.154 tol=3.14 2024-07-10 14:25:32,748 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=81.5 pTM=0.417 ipTM=0.156 tol=1.4 2024-07-10 14:26:17,312 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=81.4 pTM=0.416 ipTM=0.157 tol=1.21 2024-07-10 14:27:01,886 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=81.4 pTM=0.415 ipTM=0.156 tol=1.41 2024-07-10 14:27:46,446 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=81.6 pTM=0.415 ipTM=0.157 tol=1.66 2024-07-10 14:28:31,038 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=81.4 pTM=0.416 ipTM=0.156 tol=1.27 2024-07-10 14:29:15,604 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=81.5 pTM=0.416 ipTM=0.158 tol=1.43 2024-07-10 14:30:00,146 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=81.6 pTM=0.416 ipTM=0.159 tol=2.23 2024-07-10 14:30:44,730 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=81.8 pTM=0.42 ipTM=0.163 tol=1.5 2024-07-10 14:31:29,340 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=81.8 pTM=0.42 ipTM=0.169 tol=3.4 2024-07-10 14:32:13,920 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=81.9 pTM=0.423 ipTM=0.164 tol=2.86 2024-07-10 14:32:58,497 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=81.8 pTM=0.421 ipTM=0.163 tol=2.14 2024-07-10 14:33:43,071 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=81.7 pTM=0.421 ipTM=0.16 tol=2.66 2024-07-10 14:34:27,650 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=81.9 pTM=0.419 ipTM=0.163 tol=3.2 2024-07-10 14:35:12,239 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=81.8 pTM=0.42 ipTM=0.163 tol=1.97 2024-07-10 14:35:56,813 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=81.7 pTM=0.419 ipTM=0.167 tol=3.2 2024-07-10 14:36:41,355 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=81.9 pTM=0.425 ipTM=0.163 tol=1.91 2024-07-10 14:37:25,911 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=81.8 pTM=0.419 ipTM=0.164 tol=1.13 2024-07-10 14:38:10,489 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=81.9 pTM=0.422 ipTM=0.163 tol=0.786 2024-07-10 14:38:55,089 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=81.8 pTM=0.423 ipTM=0.17 tol=1.78 2024-07-10 14:39:39,662 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=81.8 pTM=0.423 ipTM=0.164 tol=1.99 2024-07-10 14:40:24,233 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=81.8 pTM=0.421 ipTM=0.165 tol=0.873 2024-07-10 14:41:08,790 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=81.9 pTM=0.422 ipTM=0.161 tol=1.29 2024-07-10 14:41:08,791 alphafold2_multimer_v3_model_2_seed_000 took 1381.6s (30 recycles) 2024-07-10 14:41:54,176 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=78.8 pTM=0.446 ipTM=0.183 2024-07-10 14:42:38,588 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=79 pTM=0.422 ipTM=0.15 tol=9.19 2024-07-10 14:43:23,081 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=79.4 pTM=0.422 ipTM=0.15 tol=5.05 2024-07-10 14:44:07,530 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=79.7 pTM=0.424 ipTM=0.155 tol=3.82 2024-07-10 14:44:51,953 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=79.8 pTM=0.425 ipTM=0.159 tol=3.23 2024-07-10 14:45:36,387 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=79.8 pTM=0.428 ipTM=0.158 tol=2.01 2024-07-10 14:46:20,778 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=79.8 pTM=0.429 ipTM=0.161 tol=1.64 2024-07-10 14:47:05,254 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=79.8 pTM=0.428 ipTM=0.162 tol=1.53 2024-07-10 14:47:49,668 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=79.8 pTM=0.43 ipTM=0.162 tol=1.17 2024-07-10 14:48:34,089 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=79.8 pTM=0.428 ipTM=0.164 tol=0.867 2024-07-10 14:49:18,494 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=79.7 pTM=0.429 ipTM=0.164 tol=1.17 2024-07-10 14:50:02,868 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=79.8 pTM=0.431 ipTM=0.165 tol=1 2024-07-10 14:50:47,249 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=79.8 pTM=0.428 ipTM=0.162 tol=0.715 2024-07-10 14:51:31,607 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=79.5 pTM=0.429 ipTM=0.164 tol=0.605 2024-07-10 14:52:15,972 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=79.6 pTM=0.43 ipTM=0.165 tol=1.03 2024-07-10 14:53:00,344 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=79.6 pTM=0.428 ipTM=0.166 tol=0.791 2024-07-10 14:53:44,714 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=79.8 pTM=0.431 ipTM=0.169 tol=0.607 2024-07-10 14:54:29,106 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=79.6 pTM=0.43 ipTM=0.169 tol=0.519 2024-07-10 14:55:13,508 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=79.7 pTM=0.431 ipTM=0.167 tol=1.03 2024-07-10 14:55:57,882 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=79.6 pTM=0.429 ipTM=0.167 tol=0.526 2024-07-10 14:56:42,277 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=79.6 pTM=0.431 ipTM=0.17 tol=0.741 2024-07-10 14:57:26,675 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=79.6 pTM=0.431 ipTM=0.169 tol=0.519 2024-07-10 14:58:11,075 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=79.5 pTM=0.431 ipTM=0.169 tol=0.824 2024-07-10 14:58:55,451 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=79.6 pTM=0.432 ipTM=0.17 tol=0.913 2024-07-10 14:59:39,805 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=79.7 pTM=0.435 ipTM=0.172 tol=1.21 2024-07-10 15:00:24,186 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=79.6 pTM=0.431 ipTM=0.175 tol=1.76 2024-07-10 15:01:08,570 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=79.5 pTM=0.431 ipTM=0.175 tol=0.787 2024-07-10 15:01:52,971 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=79.7 pTM=0.436 ipTM=0.178 tol=0.889 2024-07-10 15:02:37,370 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=79.8 pTM=0.435 ipTM=0.183 tol=2.12 2024-07-10 15:03:21,681 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=79.8 pTM=0.483 ipTM=0.363 tol=7.41 2024-07-10 15:04:05,934 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=80.4 pTM=0.558 ipTM=0.59 tol=4.52 2024-07-10 15:04:05,935 alphafold2_multimer_v3_model_3_seed_000 took 1376.1s (30 recycles) 2024-07-10 15:04:51,334 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=77.9 pTM=0.455 ipTM=0.242 2024-07-10 15:05:35,866 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=79.1 pTM=0.423 ipTM=0.161 tol=5.74 2024-07-10 15:06:20,398 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=78.7 pTM=0.421 ipTM=0.16 tol=6.13 2024-07-10 15:07:04,891 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=78.7 pTM=0.42 ipTM=0.161 tol=4.79 2024-07-10 15:07:49,422 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=78.9 pTM=0.42 ipTM=0.161 tol=2.84 2024-07-10 15:08:33,899 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=78.7 pTM=0.421 ipTM=0.172 tol=4.04 2024-07-10 15:09:18,349 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=78.6 pTM=0.423 ipTM=0.18 tol=3.7 2024-07-10 15:10:02,798 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=78.5 pTM=0.423 ipTM=0.18 tol=1.55 2024-07-10 15:10:47,220 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=78.6 pTM=0.423 ipTM=0.182 tol=0.793 2024-07-10 15:11:31,655 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=78.5 pTM=0.419 ipTM=0.181 tol=1.32 2024-07-10 15:12:16,111 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=78.6 pTM=0.42 ipTM=0.182 tol=1.33 2024-07-10 15:13:00,565 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=78.6 pTM=0.418 ipTM=0.183 tol=1.38 2024-07-10 15:13:45,028 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=78.3 pTM=0.418 ipTM=0.185 tol=1.14 2024-07-10 15:14:29,472 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=78.2 pTM=0.421 ipTM=0.193 tol=1.13 2024-07-10 15:15:13,911 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=78.4 pTM=0.422 ipTM=0.195 tol=0.971 2024-07-10 15:15:58,365 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=78.3 pTM=0.419 ipTM=0.193 tol=0.603 2024-07-10 15:16:42,919 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=78.4 pTM=0.422 ipTM=0.197 tol=1.17 2024-07-10 15:17:27,382 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=78.5 pTM=0.423 ipTM=0.201 tol=1.49 2024-07-10 15:18:11,818 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=78.6 pTM=0.422 ipTM=0.198 tol=0.886 2024-07-10 15:18:56,207 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=78.3 pTM=0.418 ipTM=0.196 tol=0.941 2024-07-10 15:19:40,615 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=78.4 pTM=0.42 ipTM=0.197 tol=1.05 2024-07-10 15:20:24,995 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=78.3 pTM=0.419 ipTM=0.196 tol=1.26 2024-07-10 15:21:09,424 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=78.4 pTM=0.421 ipTM=0.196 tol=2.72 2024-07-10 15:21:53,878 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=78.5 pTM=0.419 ipTM=0.198 tol=2.13 2024-07-10 15:22:38,288 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=78.6 pTM=0.421 ipTM=0.194 tol=1.32 2024-07-10 15:23:22,730 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=78.2 pTM=0.418 ipTM=0.196 tol=0.834 2024-07-10 15:24:07,185 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=78.3 pTM=0.418 ipTM=0.19 tol=1.12 2024-07-10 15:24:51,560 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=78.2 pTM=0.421 ipTM=0.2 tol=1.77 2024-07-10 15:25:35,961 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=78.4 pTM=0.419 ipTM=0.194 tol=2.06 2024-07-10 15:26:20,366 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=78.4 pTM=0.42 ipTM=0.198 tol=1.78 2024-07-10 15:27:04,769 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=78.4 pTM=0.418 ipTM=0.193 tol=1.37 2024-07-10 15:27:04,770 alphafold2_multimer_v3_model_4_seed_000 took 1377.8s (30 recycles) 2024-07-10 15:27:50,309 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=77.3 pTM=0.424 ipTM=0.184 2024-07-10 15:28:34,893 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=77.8 pTM=0.42 ipTM=0.152 tol=8.31 2024-07-10 15:29:19,505 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=78.3 pTM=0.414 ipTM=0.146 tol=7.66 2024-07-10 15:30:04,095 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=78.8 pTM=0.415 ipTM=0.147 tol=4.44 2024-07-10 15:30:48,679 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=78.9 pTM=0.413 ipTM=0.155 tol=4.45 2024-07-10 15:31:33,310 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=79 pTM=0.419 ipTM=0.171 tol=4.75 2024-07-10 15:32:17,921 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=78.8 pTM=0.418 ipTM=0.177 tol=2.24 2024-07-10 15:33:02,507 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=78.8 pTM=0.42 ipTM=0.182 tol=1.21 2024-07-10 15:33:47,100 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=78.8 pTM=0.42 ipTM=0.182 tol=1.54 2024-07-10 15:34:31,708 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=78.8 pTM=0.416 ipTM=0.178 tol=1.05 2024-07-10 15:35:16,316 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=79 pTM=0.416 ipTM=0.172 tol=2.29 2024-07-10 15:36:00,949 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=78.9 pTM=0.416 ipTM=0.177 tol=2.42 2024-07-10 15:36:45,563 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=78.8 pTM=0.414 ipTM=0.181 tol=2.46 2024-07-10 15:37:30,133 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=78.7 pTM=0.414 ipTM=0.181 tol=1.96 2024-07-10 15:38:14,697 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=78.8 pTM=0.413 ipTM=0.176 tol=1.96 2024-07-10 15:38:59,269 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=78.9 pTM=0.411 ipTM=0.175 tol=2.23 2024-07-10 15:39:43,828 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=78.8 pTM=0.41 ipTM=0.171 tol=2.46 2024-07-10 15:40:28,416 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=78.8 pTM=0.409 ipTM=0.168 tol=1.05 2024-07-10 15:41:12,988 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=78.8 pTM=0.409 ipTM=0.17 tol=0.925 2024-07-10 15:41:57,589 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=78.8 pTM=0.41 ipTM=0.172 tol=2.43 2024-07-10 15:42:42,260 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=78.6 pTM=0.409 ipTM=0.172 tol=0.879 2024-07-10 15:43:26,872 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=78.8 pTM=0.409 ipTM=0.169 tol=2.8 2024-07-10 15:44:11,500 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=78.7 pTM=0.41 ipTM=0.171 tol=2.26 2024-07-10 15:44:56,141 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=78.8 pTM=0.407 ipTM=0.169 tol=2.56 2024-07-10 15:45:40,748 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=79 pTM=0.412 ipTM=0.17 tol=2.34 2024-07-10 15:46:25,345 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=78.8 pTM=0.412 ipTM=0.178 tol=2.04 2024-07-10 15:47:09,911 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=78.7 pTM=0.412 ipTM=0.175 tol=0.747 2024-07-10 15:47:54,510 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=78.7 pTM=0.414 ipTM=0.174 tol=0.993 2024-07-10 15:48:39,114 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=78.8 pTM=0.414 ipTM=0.175 tol=0.69 2024-07-10 15:49:23,732 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=78.6 pTM=0.411 ipTM=0.174 tol=1 2024-07-10 15:50:08,305 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=78.6 pTM=0.409 ipTM=0.173 tol=1.23 2024-07-10 15:50:08,306 alphafold2_multimer_v3_model_5_seed_000 took 1382.5s (30 recycles) 2024-07-10 15:50:09,336 reranking models by 'multimer' metric 2024-07-10 15:50:13,018 Warning: importing 'simtk.openmm' is deprecated. Import 'openmm' instead. 2024-07-10 15:51:12,428 Relaxation took 63.1s 2024-07-10 15:51:12,428 rank_001_alphafold2_multimer_v3_model_1_seed_000 pLDDT=81.8 pTM=0.612 ipTM=0.781 2024-07-10 15:52:30,045 Relaxation took 77.6s 2024-07-10 15:52:30,045 rank_002_alphafold2_multimer_v3_model_3_seed_000 pLDDT=80.4 pTM=0.558 ipTM=0.59 2024-07-10 15:53:45,459 Relaxation took 75.4s 2024-07-10 15:53:45,460 rank_003_alphafold2_multimer_v3_model_4_seed_000 pLDDT=78.4 pTM=0.418 ipTM=0.193 2024-07-10 15:54:48,277 Relaxation took 62.8s 2024-07-10 15:54:48,277 rank_004_alphafold2_multimer_v3_model_5_seed_000 pLDDT=78.6 pTM=0.409 ipTM=0.173 2024-07-10 15:55:34,190 Relaxation took 45.9s 2024-07-10 15:55:34,190 rank_005_alphafold2_multimer_v3_model_2_seed_000 pLDDT=81.9 pTM=0.422 ipTM=0.161 2024-07-10 15:55:36,874 Done