2024-07-10 14:07:22,285 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3)
2024-07-10 14:07:22,616 Running on GPU
2024-07-10 14:07:23,449 Found 6 citations for tools or databases
2024-07-10 14:07:23,449 Query 1/1: GRIK5_NHRF1 (length 1338)
2024-07-10 14:07:23,906 Sleeping for 8s. Reason: PENDING
2024-07-10 14:07:32,321 Sleeping for 8s. Reason: RUNNING
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2024-07-10 14:11:51,396 Sleeping for 7s. Reason: RUNNING
2024-07-10 14:12:41,894 Sleeping for 7s. Reason: PENDING
2024-07-10 14:12:49,858 Sleeping for 9s. Reason: RUNNING
2024-07-10 14:12:59,281 Sleeping for 8s. Reason: RUNNING
2024-07-10 14:13:07,999 Sleeping for 6s. Reason: RUNNING
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2024-07-10 14:13:58,175 Sleeping for 9s. Reason: RUNNING
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2024-07-10 14:14:15,053 Sleeping for 10s. Reason: RUNNING
2024-07-10 14:14:25,494 Sleeping for 6s. Reason: RUNNING
2024-07-10 14:14:31,921 Sleeping for 5s. Reason: RUNNING
2024-07-10 14:14:37,335 Sleeping for 6s. Reason: RUNNING
2024-07-10 14:14:43,794 Sleeping for 8s. Reason: RUNNING
2024-07-10 14:14:52,237 Sleeping for 9s. Reason: RUNNING
2024-07-10 14:15:01,676 Sleeping for 8s. Reason: RUNNING
2024-07-10 14:15:10,120 Sleeping for 7s. Reason: RUNNING
2024-07-10 14:15:22,611 Setting max_seq=508, max_extra_seq=2048
2024-07-10 14:18:37,906 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=68.6 pTM=0.407 ipTM=0.209
2024-07-10 14:19:24,278 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=68.8 pTM=0.395 ipTM=0.172 tol=10.6
2024-07-10 14:20:10,712 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=68.7 pTM=0.391 ipTM=0.214 tol=9.8
2024-07-10 14:20:57,155 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=68.8 pTM=0.389 ipTM=0.161 tol=3.51
2024-07-10 14:21:43,597 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=68.7 pTM=0.387 ipTM=0.157 tol=2.32
2024-07-10 14:22:30,057 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=68.6 pTM=0.386 ipTM=0.159 tol=3.37
2024-07-10 14:23:16,527 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=68.8 pTM=0.387 ipTM=0.158 tol=3.85
2024-07-10 14:24:03,010 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=68.8 pTM=0.385 ipTM=0.153 tol=4.3
2024-07-10 14:24:49,507 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=68.8 pTM=0.385 ipTM=0.154 tol=3.91
2024-07-10 14:25:36,019 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=68.6 pTM=0.386 ipTM=0.155 tol=3.14
2024-07-10 14:26:22,530 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=68.6 pTM=0.388 ipTM=0.157 tol=3.89
2024-07-10 14:27:09,101 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=68.6 pTM=0.388 ipTM=0.156 tol=2.91
2024-07-10 14:27:55,598 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=68.4 pTM=0.386 ipTM=0.156 tol=2.23
2024-07-10 14:28:42,121 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=68.5 pTM=0.387 ipTM=0.156 tol=3.12
2024-07-10 14:29:28,603 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=68.7 pTM=0.39 ipTM=0.159 tol=2.65
2024-07-10 14:30:15,127 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=68.6 pTM=0.387 ipTM=0.158 tol=3.53
2024-07-10 14:31:01,620 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=68.5 pTM=0.388 ipTM=0.159 tol=3.72
2024-07-10 14:31:48,170 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=68.8 pTM=0.388 ipTM=0.159 tol=3.08
2024-07-10 14:32:34,677 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=68.7 pTM=0.387 ipTM=0.158 tol=3.58
2024-07-10 14:33:21,188 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=68.6 pTM=0.386 ipTM=0.158 tol=3.41
2024-07-10 14:34:07,723 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=68.5 pTM=0.386 ipTM=0.158 tol=3.39
2024-07-10 14:34:54,250 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=68.4 pTM=0.385 ipTM=0.157 tol=1.37
2024-07-10 14:35:40,783 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=68.4 pTM=0.385 ipTM=0.156 tol=3.65
2024-07-10 14:36:27,281 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=68.4 pTM=0.384 ipTM=0.158 tol=4.28
2024-07-10 14:37:13,793 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=68.6 pTM=0.385 ipTM=0.157 tol=3.86
2024-07-10 14:38:00,353 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=68.5 pTM=0.386 ipTM=0.158 tol=4.08
2024-07-10 14:38:46,865 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=68.6 pTM=0.385 ipTM=0.156 tol=1.88
2024-07-10 14:39:33,410 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=68.6 pTM=0.387 ipTM=0.157 tol=2.25
2024-07-10 14:40:19,912 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=68.6 pTM=0.386 ipTM=0.159 tol=2.47
2024-07-10 14:41:06,397 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=68.6 pTM=0.385 ipTM=0.157 tol=2.45
2024-07-10 14:41:52,882 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=68.6 pTM=0.385 ipTM=0.156 tol=2.25
2024-07-10 14:41:52,883 alphafold2_multimer_v3_model_1_seed_000 took 1584.8s (30 recycles)
2024-07-10 14:42:40,402 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=66.8 pTM=0.414 ipTM=0.17
2024-07-10 14:43:26,948 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=68.4 pTM=0.397 ipTM=0.158 tol=8.59
2024-07-10 14:44:13,506 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=68.8 pTM=0.391 ipTM=0.158 tol=6.86
2024-07-10 14:45:00,096 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=69 pTM=0.389 ipTM=0.159 tol=2.93
2024-07-10 14:45:46,666 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=69.1 pTM=0.389 ipTM=0.157 tol=2.43
2024-07-10 14:46:33,271 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=69.2 pTM=0.389 ipTM=0.157 tol=1.55
2024-07-10 14:47:19,887 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=69.1 pTM=0.39 ipTM=0.157 tol=1.16
2024-07-10 14:48:06,489 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=69.3 pTM=0.389 ipTM=0.156 tol=1.34
2024-07-10 14:48:53,056 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=69.4 pTM=0.388 ipTM=0.158 tol=1.5
2024-07-10 14:49:39,585 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=69.4 pTM=0.388 ipTM=0.158 tol=1.17
2024-07-10 14:50:26,109 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=69.4 pTM=0.389 ipTM=0.159 tol=1.15
2024-07-10 14:51:12,687 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=69.3 pTM=0.389 ipTM=0.157 tol=1.52
2024-07-10 14:51:59,209 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=69.2 pTM=0.389 ipTM=0.158 tol=1.23
2024-07-10 14:52:45,773 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=69.2 pTM=0.389 ipTM=0.156 tol=1.34
2024-07-10 14:53:32,328 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=69.4 pTM=0.39 ipTM=0.157 tol=1.53
2024-07-10 14:54:18,887 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=69.3 pTM=0.389 ipTM=0.157 tol=1.37
2024-07-10 14:55:05,392 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=69.3 pTM=0.39 ipTM=0.16 tol=1.24
2024-07-10 14:55:51,989 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=69.5 pTM=0.391 ipTM=0.159 tol=1.52
2024-07-10 14:56:38,523 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=69.4 pTM=0.391 ipTM=0.158 tol=1.4
2024-07-10 14:57:25,044 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=69.3 pTM=0.39 ipTM=0.157 tol=1.29
2024-07-10 14:58:11,559 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=69.4 pTM=0.391 ipTM=0.157 tol=1.55
2024-07-10 14:58:58,081 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=69.2 pTM=0.389 ipTM=0.157 tol=1.41
2024-07-10 14:59:44,604 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=69.2 pTM=0.389 ipTM=0.159 tol=0.971
2024-07-10 15:00:31,117 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=69.3 pTM=0.387 ipTM=0.16 tol=1.22
2024-07-10 15:01:17,703 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=69.2 pTM=0.388 ipTM=0.161 tol=1.21
2024-07-10 15:02:04,265 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=69.2 pTM=0.386 ipTM=0.159 tol=1.38
2024-07-10 15:02:50,828 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=69.2 pTM=0.39 ipTM=0.157 tol=1.28
2024-07-10 15:03:37,409 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=69.4 pTM=0.391 ipTM=0.158 tol=0.948
2024-07-10 15:04:23,972 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=69.2 pTM=0.387 ipTM=0.157 tol=1.5
2024-07-10 15:05:10,548 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=69.4 pTM=0.39 ipTM=0.157 tol=1.32
2024-07-10 15:05:57,103 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=69.3 pTM=0.389 ipTM=0.158 tol=1.46
2024-07-10 15:05:57,105 alphafold2_multimer_v3_model_2_seed_000 took 1443.2s (30 recycles)
2024-07-10 15:06:44,793 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=67.7 pTM=0.422 ipTM=0.147
2024-07-10 15:07:31,400 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=68.2 pTM=0.425 ipTM=0.157 tol=17.8
2024-07-10 15:08:17,955 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=67.3 pTM=0.425 ipTM=0.188 tol=10.9
2024-07-10 15:09:04,494 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=67.2 pTM=0.419 ipTM=0.182 tol=10
2024-07-10 15:09:51,021 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=67.1 pTM=0.414 ipTM=0.179 tol=6.61
2024-07-10 15:10:37,545 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=67.3 pTM=0.414 ipTM=0.176 tol=5.6
2024-07-10 15:11:24,070 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=66.9 pTM=0.416 ipTM=0.171 tol=7.64
2024-07-10 15:12:10,663 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=67.4 pTM=0.411 ipTM=0.168 tol=6.41
2024-07-10 15:12:57,201 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=67.2 pTM=0.412 ipTM=0.17 tol=7.45
2024-07-10 15:13:43,749 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=67.3 pTM=0.414 ipTM=0.171 tol=6.48
2024-07-10 15:14:30,274 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=67.2 pTM=0.413 ipTM=0.173 tol=5.9
2024-07-10 15:15:16,797 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=67.6 pTM=0.41 ipTM=0.175 tol=5.31
2024-07-10 15:16:03,364 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=67.8 pTM=0.413 ipTM=0.174 tol=6.28
2024-07-10 15:16:49,952 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=67.8 pTM=0.415 ipTM=0.181 tol=5.75
2024-07-10 15:17:36,459 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=67.9 pTM=0.416 ipTM=0.175 tol=5.52
2024-07-10 15:18:23,016 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=67.7 pTM=0.413 ipTM=0.179 tol=4.66
2024-07-10 15:19:09,556 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=67.9 pTM=0.413 ipTM=0.172 tol=4.91
2024-07-10 15:19:56,094 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=67.8 pTM=0.413 ipTM=0.174 tol=6.04
2024-07-10 15:20:42,672 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=67.8 pTM=0.414 ipTM=0.17 tol=3.8
2024-07-10 15:21:29,193 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=67.7 pTM=0.412 ipTM=0.176 tol=4.59
2024-07-10 15:22:15,788 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=67.7 pTM=0.408 ipTM=0.169 tol=6.61
2024-07-10 15:23:02,337 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=67.6 pTM=0.409 ipTM=0.176 tol=9.66
2024-07-10 15:23:48,879 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=67.6 pTM=0.408 ipTM=0.173 tol=5.83
2024-07-10 15:24:35,415 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=67.6 pTM=0.412 ipTM=0.18 tol=6.33
2024-07-10 15:25:22,026 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=67.8 pTM=0.414 ipTM=0.175 tol=4.65
2024-07-10 15:26:08,595 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=67.8 pTM=0.414 ipTM=0.179 tol=5.15
2024-07-10 15:26:55,162 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=67.7 pTM=0.412 ipTM=0.17 tol=5.45
2024-07-10 15:27:41,746 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=67.8 pTM=0.413 ipTM=0.179 tol=7.17
2024-07-10 15:28:28,291 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=67.7 pTM=0.416 ipTM=0.172 tol=11.4
2024-07-10 15:29:14,826 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=67.6 pTM=0.416 ipTM=0.174 tol=6.23
2024-07-10 15:30:01,351 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=67.8 pTM=0.413 ipTM=0.167 tol=6.69
2024-07-10 15:30:01,352 alphafold2_multimer_v3_model_3_seed_000 took 1443.2s (30 recycles)
2024-07-10 15:30:48,950 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=66.5 pTM=0.437 ipTM=0.146
2024-07-10 15:31:35,553 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=66.4 pTM=0.405 ipTM=0.155 tol=13
2024-07-10 15:32:22,165 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=66.1 pTM=0.4 ipTM=0.154 tol=8.64
2024-07-10 15:33:08,783 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=66.1 pTM=0.392 ipTM=0.152 tol=5.35
2024-07-10 15:33:55,424 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=66 pTM=0.391 ipTM=0.152 tol=3.26
2024-07-10 15:34:42,081 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=65.7 pTM=0.391 ipTM=0.152 tol=1.84
2024-07-10 15:35:28,688 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=65.4 pTM=0.391 ipTM=0.152 tol=5.21
2024-07-10 15:36:15,406 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=65.7 pTM=0.389 ipTM=0.15 tol=4.98
2024-07-10 15:37:02,131 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=65.9 pTM=0.389 ipTM=0.15 tol=3.39
2024-07-10 15:37:48,806 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=65.9 pTM=0.39 ipTM=0.15 tol=5.73
2024-07-10 15:38:35,460 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=65.6 pTM=0.39 ipTM=0.153 tol=4.1
2024-07-10 15:39:22,113 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=66.1 pTM=0.391 ipTM=0.152 tol=4.58
2024-07-10 15:40:08,751 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=65.7 pTM=0.392 ipTM=0.155 tol=4.71
2024-07-10 15:40:55,407 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=65.2 pTM=0.39 ipTM=0.152 tol=9.52
2024-07-10 15:41:42,026 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=65.4 pTM=0.393 ipTM=0.155 tol=3.04
2024-07-10 15:42:28,639 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=65 pTM=0.393 ipTM=0.155 tol=3.77
2024-07-10 15:43:15,261 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=65.2 pTM=0.395 ipTM=0.157 tol=4.51
2024-07-10 15:44:01,856 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=65.1 pTM=0.394 ipTM=0.154 tol=5.65
2024-07-10 15:44:48,453 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=65.2 pTM=0.394 ipTM=0.155 tol=3.67
2024-07-10 15:45:35,052 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=65.1 pTM=0.39 ipTM=0.153 tol=3.82
2024-07-10 15:46:21,665 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=65.4 pTM=0.39 ipTM=0.155 tol=3.16
2024-07-10 15:47:08,322 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=65.4 pTM=0.389 ipTM=0.152 tol=3.84
2024-07-10 15:47:54,942 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=65.3 pTM=0.389 ipTM=0.157 tol=3.9
2024-07-10 15:48:41,573 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=65.4 pTM=0.391 ipTM=0.153 tol=2.93
2024-07-10 15:49:28,188 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=65.8 pTM=0.393 ipTM=0.156 tol=3.46
2024-07-10 15:50:14,835 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=64.9 pTM=0.388 ipTM=0.15 tol=10.9
2024-07-10 15:51:01,445 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=65.3 pTM=0.39 ipTM=0.152 tol=5.17
2024-07-10 15:51:48,050 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=65.6 pTM=0.392 ipTM=0.154 tol=4.57
2024-07-10 15:52:34,674 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=65.6 pTM=0.396 ipTM=0.156 tol=3.23
2024-07-10 15:53:21,264 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=65.1 pTM=0.393 ipTM=0.156 tol=8.44
2024-07-10 15:54:07,909 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=65.5 pTM=0.394 ipTM=0.153 tol=5.2
2024-07-10 15:54:07,910 alphafold2_multimer_v3_model_4_seed_000 took 1445.5s (30 recycles)
2024-07-10 15:54:55,521 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=66.9 pTM=0.421 ipTM=0.159
2024-07-10 15:55:42,067 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=66.8 pTM=0.409 ipTM=0.162 tol=15.1
2024-07-10 15:56:28,652 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=67.1 pTM=0.409 ipTM=0.16 tol=5.57
2024-07-10 15:57:15,242 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=67.4 pTM=0.411 ipTM=0.164 tol=5.81
2024-07-10 15:58:01,799 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=67.5 pTM=0.408 ipTM=0.16 tol=5.5
2024-07-10 15:58:48,331 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=67.7 pTM=0.408 ipTM=0.158 tol=3.63
2024-07-10 15:59:34,884 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=67.9 pTM=0.41 ipTM=0.157 tol=3.48
2024-07-10 16:00:21,412 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=68 pTM=0.406 ipTM=0.157 tol=3.12
2024-07-10 16:01:07,959 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=68.1 pTM=0.405 ipTM=0.157 tol=6.36
2024-07-10 16:01:54,509 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=67.9 pTM=0.407 ipTM=0.16 tol=3.03
2024-07-10 16:02:41,038 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=67.8 pTM=0.405 ipTM=0.161 tol=3.94
2024-07-10 16:03:27,547 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=67.9 pTM=0.406 ipTM=0.16 tol=4.46
2024-07-10 16:04:14,071 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=67.8 pTM=0.406 ipTM=0.161 tol=5.25
2024-07-10 16:05:00,562 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=67.9 pTM=0.407 ipTM=0.162 tol=3.51
2024-07-10 16:05:47,137 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=68.1 pTM=0.409 ipTM=0.165 tol=4.04
2024-07-10 16:06:33,661 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=67.9 pTM=0.408 ipTM=0.165 tol=4.34
2024-07-10 16:07:20,193 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=67.9 pTM=0.409 ipTM=0.163 tol=3.68
2024-07-10 16:08:06,724 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=68 pTM=0.406 ipTM=0.161 tol=3.75
2024-07-10 16:08:53,292 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=68.1 pTM=0.407 ipTM=0.159 tol=3.71
2024-07-10 16:09:39,839 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=67.9 pTM=0.405 ipTM=0.159 tol=4.59
2024-07-10 16:10:26,404 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=67.9 pTM=0.403 ipTM=0.162 tol=2.89
2024-07-10 16:11:12,975 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=67.9 pTM=0.404 ipTM=0.159 tol=1.69
2024-07-10 16:11:59,523 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=67.8 pTM=0.404 ipTM=0.161 tol=2.15
2024-07-10 16:12:46,111 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=67.9 pTM=0.404 ipTM=0.157 tol=1.98
2024-07-10 16:13:32,616 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=68.1 pTM=0.405 ipTM=0.159 tol=1.74
2024-07-10 16:14:19,147 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=67.8 pTM=0.404 ipTM=0.159 tol=4.15
2024-07-10 16:15:05,705 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=68 pTM=0.405 ipTM=0.161 tol=4.75
2024-07-10 16:15:52,234 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=67.9 pTM=0.405 ipTM=0.159 tol=4.1
2024-07-10 16:16:38,743 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=67.9 pTM=0.409 ipTM=0.164 tol=3.53
2024-07-10 16:17:25,224 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=67.8 pTM=0.406 ipTM=0.165 tol=2.87
2024-07-10 16:18:11,746 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=67.8 pTM=0.407 ipTM=0.168 tol=4.5
2024-07-10 16:18:11,748 alphafold2_multimer_v3_model_5_seed_000 took 1442.8s (30 recycles)
2024-07-10 16:18:12,822 reranking models by 'multimer' metric
2024-07-10 16:18:16,706 Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
2024-07-10 16:19:56,273 Relaxation took 103.4s
2024-07-10 16:19:56,273 rank_001_alphafold2_multimer_v3_model_3_seed_000 pLDDT=67.8 pTM=0.413 ipTM=0.167
2024-07-10 16:23:33,435 Relaxation took 217.2s
2024-07-10 16:23:33,435 rank_002_alphafold2_multimer_v3_model_5_seed_000 pLDDT=67.8 pTM=0.407 ipTM=0.168
2024-07-10 16:25:30,652 Relaxation took 117.2s
2024-07-10 16:25:30,652 rank_003_alphafold2_multimer_v3_model_2_seed_000 pLDDT=69.3 pTM=0.389 ipTM=0.158
2024-07-10 16:26:51,949 Relaxation took 81.3s
2024-07-10 16:26:51,949 rank_004_alphafold2_multimer_v3_model_1_seed_000 pLDDT=68.6 pTM=0.385 ipTM=0.156
2024-07-10 16:29:15,990 Relaxation took 144.0s
2024-07-10 16:29:15,990 rank_005_alphafold2_multimer_v3_model_4_seed_000 pLDDT=65.5 pTM=0.394 ipTM=0.153
2024-07-10 16:29:18,672 Done