2024-07-10 15:24:00,472 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3)
2024-07-10 15:24:00,789 Running on GPU
2024-07-10 15:24:04,582 Found 6 citations for tools or databases
2024-07-10 15:24:04,582 Query 1/1: H2B2D_CADH3 (length 993)
2024-07-10 15:24:05,043 Sleeping for 8s. Reason: PENDING
2024-07-10 15:24:13,464 Sleeping for 5s. Reason: RUNNING
2024-07-10 15:24:18,879 Sleeping for 5s. Reason: RUNNING
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2024-07-10 15:25:00,522 Sleeping for 6s. Reason: RUNNING
2024-07-10 15:25:06,953 Sleeping for 8s. Reason: RUNNING
2024-07-10 15:25:15,386 Sleeping for 6s. Reason: RUNNING
2024-07-10 15:25:21,803 Sleeping for 7s. Reason: RUNNING
2024-07-10 15:25:30,269 Sleeping for 9s. Reason: RUNNING
2024-07-10 15:25:39,710 Sleeping for 6s. Reason: RUNNING
2024-07-10 15:25:46,131 Sleeping for 10s. Reason: RUNNING
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2024-07-10 15:26:02,958 Sleeping for 10s. Reason: RUNNING
2024-07-10 15:26:13,391 Sleeping for 6s. Reason: RUNNING
2024-07-10 15:26:19,810 Sleeping for 5s. Reason: RUNNING
2024-07-10 15:26:28,464 Sleeping for 8s. Reason: RUNNING
2024-07-10 15:26:36,896 Sleeping for 8s. Reason: RUNNING
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2024-07-10 15:26:50,757 Sleeping for 7s. Reason: RUNNING
2024-07-10 15:27:23,689 Sleeping for 8s. Reason: PENDING
2024-07-10 15:27:32,099 Sleeping for 8s. Reason: RUNNING
2024-07-10 15:27:41,037 Sleeping for 5s. Reason: RUNNING
2024-07-10 15:27:46,468 Sleeping for 8s. Reason: RUNNING
2024-07-10 15:27:54,916 Sleeping for 6s. Reason: RUNNING
2024-07-10 15:28:01,329 Sleeping for 7s. Reason: RUNNING
2024-07-10 15:28:08,736 Sleeping for 6s. Reason: RUNNING
2024-07-10 15:28:15,164 Sleeping for 5s. Reason: RUNNING
2024-07-10 15:28:21,090 Sleeping for 7s. Reason: RUNNING
2024-07-10 15:28:28,529 Sleeping for 6s. Reason: RUNNING
2024-07-10 15:28:34,931 Sleeping for 8s. Reason: RUNNING
2024-07-10 15:28:43,359 Sleeping for 8s. Reason: RUNNING
2024-07-10 15:28:51,818 Sleeping for 5s. Reason: RUNNING
2024-07-10 15:28:57,248 Sleeping for 6s. Reason: RUNNING
2024-07-10 15:29:07,508 Setting max_seq=508, max_extra_seq=2048
2024-07-10 15:32:16,851 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=62.4 pTM=0.412 ipTM=0.164
2024-07-10 15:32:39,527 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=62.7 pTM=0.426 ipTM=0.158 tol=12.1
2024-07-10 15:33:02,295 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=62.8 pTM=0.432 ipTM=0.152 tol=8.43
2024-07-10 15:33:25,151 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=62.2 pTM=0.426 ipTM=0.147 tol=7.92
2024-07-10 15:33:48,037 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=62.4 pTM=0.428 ipTM=0.146 tol=8.16
2024-07-10 15:34:10,915 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=62.5 pTM=0.43 ipTM=0.145 tol=7.26
2024-07-10 15:34:33,812 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=62.3 pTM=0.428 ipTM=0.146 tol=3.38
2024-07-10 15:34:56,715 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=62.6 pTM=0.429 ipTM=0.147 tol=2.64
2024-07-10 15:35:19,652 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=62.4 pTM=0.428 ipTM=0.145 tol=3.46
2024-07-10 15:35:42,595 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=62.5 pTM=0.424 ipTM=0.147 tol=1.84
2024-07-10 15:36:05,544 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=62.7 pTM=0.431 ipTM=0.148 tol=2.59
2024-07-10 15:36:28,495 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=62.6 pTM=0.426 ipTM=0.147 tol=3.69
2024-07-10 15:36:51,455 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=62.7 pTM=0.428 ipTM=0.15 tol=2.31
2024-07-10 15:37:14,406 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=62.6 pTM=0.428 ipTM=0.15 tol=3.08
2024-07-10 15:37:37,368 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=62.6 pTM=0.427 ipTM=0.15 tol=2.29
2024-07-10 15:38:00,331 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=62.7 pTM=0.426 ipTM=0.151 tol=7.46
2024-07-10 15:38:23,298 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=62.8 pTM=0.426 ipTM=0.153 tol=7.1
2024-07-10 15:38:46,269 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=62.7 pTM=0.433 ipTM=0.152 tol=5.78
2024-07-10 15:39:09,239 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=62.9 pTM=0.426 ipTM=0.151 tol=6.52
2024-07-10 15:39:32,193 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=62.8 pTM=0.427 ipTM=0.151 tol=6.13
2024-07-10 15:39:55,153 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=62.7 pTM=0.429 ipTM=0.153 tol=1.9
2024-07-10 15:40:18,114 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=62.7 pTM=0.428 ipTM=0.152 tol=2.17
2024-07-10 15:40:41,075 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=62.7 pTM=0.427 ipTM=0.151 tol=1.5
2024-07-10 15:41:04,039 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=62.6 pTM=0.429 ipTM=0.15 tol=3.15
2024-07-10 15:41:27,010 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=62.9 pTM=0.427 ipTM=0.152 tol=6.06
2024-07-10 15:41:49,988 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=62.7 pTM=0.425 ipTM=0.153 tol=6.22
2024-07-10 15:42:12,979 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=62.9 pTM=0.426 ipTM=0.152 tol=6.03
2024-07-10 15:42:35,967 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=62.7 pTM=0.429 ipTM=0.153 tol=6.22
2024-07-10 15:42:58,949 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=62.6 pTM=0.428 ipTM=0.153 tol=1.94
2024-07-10 15:43:21,937 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=62.6 pTM=0.426 ipTM=0.152 tol=2.98
2024-07-10 15:43:44,901 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=62.7 pTM=0.428 ipTM=0.152 tol=1.77
2024-07-10 15:43:44,902 alphafold2_multimer_v3_model_1_seed_000 took 872.2s (30 recycles)
2024-07-10 15:44:08,447 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=62.3 pTM=0.417 ipTM=0.163
2024-07-10 15:44:31,407 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=62.6 pTM=0.435 ipTM=0.18 tol=13.1
2024-07-10 15:44:54,349 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=62.9 pTM=0.439 ipTM=0.186 tol=4.3
2024-07-10 15:45:17,311 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=62.7 pTM=0.436 ipTM=0.184 tol=7.14
2024-07-10 15:45:40,274 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=62.9 pTM=0.44 ipTM=0.184 tol=4.9
2024-07-10 15:46:03,237 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=62.8 pTM=0.439 ipTM=0.183 tol=1.78
2024-07-10 15:46:26,191 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=62.7 pTM=0.437 ipTM=0.183 tol=1.63
2024-07-10 15:46:49,159 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=62.8 pTM=0.438 ipTM=0.183 tol=1.24
2024-07-10 15:47:12,141 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=62.8 pTM=0.441 ipTM=0.178 tol=1.69
2024-07-10 15:47:35,111 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=62.8 pTM=0.439 ipTM=0.18 tol=3.01
2024-07-10 15:47:58,080 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=62.8 pTM=0.438 ipTM=0.182 tol=3.77
2024-07-10 15:48:21,050 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=62.8 pTM=0.435 ipTM=0.18 tol=1.33
2024-07-10 15:48:44,028 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=62.8 pTM=0.438 ipTM=0.182 tol=1.28
2024-07-10 15:49:06,996 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=62.9 pTM=0.439 ipTM=0.181 tol=1.85
2024-07-10 15:49:29,964 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=62.9 pTM=0.437 ipTM=0.181 tol=1.05
2024-07-10 15:49:52,930 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=62.9 pTM=0.438 ipTM=0.181 tol=1.38
2024-07-10 15:50:15,892 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=63 pTM=0.438 ipTM=0.182 tol=0.918
2024-07-10 15:50:38,871 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=62.9 pTM=0.442 ipTM=0.183 tol=1.21
2024-07-10 15:51:01,846 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=63.1 pTM=0.44 ipTM=0.181 tol=1.35
2024-07-10 15:51:24,826 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=63 pTM=0.438 ipTM=0.18 tol=1.29
2024-07-10 15:51:47,806 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=63 pTM=0.438 ipTM=0.184 tol=1.18
2024-07-10 15:52:10,796 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=63 pTM=0.439 ipTM=0.182 tol=1.11
2024-07-10 15:52:33,787 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=63 pTM=0.438 ipTM=0.18 tol=1.11
2024-07-10 15:52:56,766 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=62.9 pTM=0.44 ipTM=0.177 tol=1.26
2024-07-10 15:53:19,758 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=63 pTM=0.438 ipTM=0.181 tol=1.09
2024-07-10 15:53:42,756 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=62.9 pTM=0.437 ipTM=0.179 tol=0.996
2024-07-10 15:54:05,748 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=63 pTM=0.439 ipTM=0.178 tol=1.24
2024-07-10 15:54:28,762 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=63 pTM=0.442 ipTM=0.18 tol=1.6
2024-07-10 15:54:51,765 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=63 pTM=0.441 ipTM=0.18 tol=1.05
2024-07-10 15:55:14,781 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=63 pTM=0.438 ipTM=0.18 tol=1.6
2024-07-10 15:55:37,788 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=63.1 pTM=0.441 ipTM=0.183 tol=1.49
2024-07-10 15:55:37,789 alphafold2_multimer_v3_model_2_seed_000 took 712.3s (30 recycles)
2024-07-10 15:56:01,451 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=61.8 pTM=0.425 ipTM=0.167
2024-07-10 15:56:24,508 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=61.8 pTM=0.448 ipTM=0.17 tol=17
2024-07-10 15:56:47,553 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=61.8 pTM=0.455 ipTM=0.177 tol=6.91
2024-07-10 15:57:10,613 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=61.9 pTM=0.457 ipTM=0.175 tol=6.07
2024-07-10 15:57:33,665 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=61.8 pTM=0.458 ipTM=0.18 tol=5.84
2024-07-10 15:57:56,699 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=61.5 pTM=0.457 ipTM=0.173 tol=4.1
2024-07-10 15:58:19,725 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=61.6 pTM=0.459 ipTM=0.179 tol=2.9
2024-07-10 15:58:42,738 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=61.5 pTM=0.46 ipTM=0.172 tol=2.29
2024-07-10 15:59:05,747 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=61.5 pTM=0.462 ipTM=0.175 tol=2.11
2024-07-10 15:59:28,744 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=61.5 pTM=0.46 ipTM=0.17 tol=2.53
2024-07-10 15:59:51,742 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=61.6 pTM=0.458 ipTM=0.181 tol=2.49
2024-07-10 16:00:14,729 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=61.6 pTM=0.459 ipTM=0.174 tol=2.44
2024-07-10 16:00:37,729 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=61.6 pTM=0.459 ipTM=0.18 tol=1.91
2024-07-10 16:01:00,751 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=61.6 pTM=0.46 ipTM=0.176 tol=1.94
2024-07-10 16:01:23,783 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=61.8 pTM=0.461 ipTM=0.186 tol=6.39
2024-07-10 16:01:46,810 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=61.6 pTM=0.46 ipTM=0.176 tol=6.57
2024-07-10 16:02:09,813 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=61.7 pTM=0.459 ipTM=0.185 tol=1.84
2024-07-10 16:02:32,840 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=61.6 pTM=0.463 ipTM=0.175 tol=1.58
2024-07-10 16:02:55,847 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=61.7 pTM=0.46 ipTM=0.182 tol=1.75
2024-07-10 16:03:18,874 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=61.5 pTM=0.458 ipTM=0.175 tol=1.86
2024-07-10 16:03:41,892 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=61.7 pTM=0.459 ipTM=0.188 tol=2.48
2024-07-10 16:04:04,908 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=61.6 pTM=0.459 ipTM=0.177 tol=1.9
2024-07-10 16:04:27,974 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=61.6 pTM=0.459 ipTM=0.183 tol=1.99
2024-07-10 16:04:50,983 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=61.5 pTM=0.46 ipTM=0.18 tol=2.2
2024-07-10 16:05:13,996 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=61.6 pTM=0.458 ipTM=0.185 tol=3.7
2024-07-10 16:05:37,026 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=61.4 pTM=0.457 ipTM=0.177 tol=3.14
2024-07-10 16:06:00,033 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=61.6 pTM=0.459 ipTM=0.186 tol=2.46
2024-07-10 16:06:23,051 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=61.8 pTM=0.463 ipTM=0.178 tol=2.81
2024-07-10 16:06:46,061 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=61.7 pTM=0.461 ipTM=0.184 tol=2.25
2024-07-10 16:07:09,074 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=61.5 pTM=0.457 ipTM=0.179 tol=2.57
2024-07-10 16:07:32,077 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=61.5 pTM=0.458 ipTM=0.187 tol=2.34
2024-07-10 16:07:32,077 alphafold2_multimer_v3_model_3_seed_000 took 713.7s (30 recycles)
2024-07-10 16:07:55,675 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=60.7 pTM=0.429 ipTM=0.144
2024-07-10 16:08:18,677 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=61.8 pTM=0.454 ipTM=0.165 tol=11.3
2024-07-10 16:08:41,656 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=62.2 pTM=0.459 ipTM=0.176 tol=7.52
2024-07-10 16:09:04,625 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=62.1 pTM=0.461 ipTM=0.174 tol=10.3
2024-07-10 16:09:27,648 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=62.4 pTM=0.462 ipTM=0.172 tol=8.5
2024-07-10 16:09:50,657 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=62.2 pTM=0.462 ipTM=0.171 tol=3.64
2024-07-10 16:10:13,656 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=62.1 pTM=0.46 ipTM=0.167 tol=2.88
2024-07-10 16:10:36,701 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=62.2 pTM=0.463 ipTM=0.163 tol=3.08
2024-07-10 16:10:59,734 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=62.2 pTM=0.463 ipTM=0.158 tol=2.23
2024-07-10 16:11:22,771 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=62.2 pTM=0.461 ipTM=0.164 tol=3.35
2024-07-10 16:11:45,798 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=62.4 pTM=0.46 ipTM=0.161 tol=3.49
2024-07-10 16:12:08,816 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=62.3 pTM=0.459 ipTM=0.163 tol=3.75
2024-07-10 16:12:31,851 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=62.3 pTM=0.461 ipTM=0.159 tol=3.23
2024-07-10 16:12:54,873 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=62.3 pTM=0.46 ipTM=0.162 tol=2.32
2024-07-10 16:13:17,896 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=62.5 pTM=0.462 ipTM=0.163 tol=2.6
2024-07-10 16:13:40,918 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=62.3 pTM=0.462 ipTM=0.161 tol=3.11
2024-07-10 16:14:03,935 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=62.3 pTM=0.461 ipTM=0.163 tol=3.32
2024-07-10 16:14:26,993 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=62.3 pTM=0.461 ipTM=0.164 tol=2.47
2024-07-10 16:14:50,017 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=62.3 pTM=0.46 ipTM=0.166 tol=3.05
2024-07-10 16:15:13,046 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=62.3 pTM=0.46 ipTM=0.167 tol=4.34
2024-07-10 16:15:36,050 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=62.4 pTM=0.461 ipTM=0.168 tol=4.48
2024-07-10 16:15:59,055 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=62.3 pTM=0.461 ipTM=0.174 tol=4.31
2024-07-10 16:16:22,058 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=62.4 pTM=0.464 ipTM=0.167 tol=3.34
2024-07-10 16:16:45,063 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=62.3 pTM=0.462 ipTM=0.171 tol=2.84
2024-07-10 16:17:08,063 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=62.2 pTM=0.459 ipTM=0.168 tol=2.1
2024-07-10 16:17:31,066 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=62.3 pTM=0.461 ipTM=0.174 tol=2.36
2024-07-10 16:17:54,103 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=62.3 pTM=0.46 ipTM=0.168 tol=2.56
2024-07-10 16:18:17,139 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=62.4 pTM=0.462 ipTM=0.175 tol=3.18
2024-07-10 16:18:40,169 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=62.3 pTM=0.463 ipTM=0.169 tol=2.45
2024-07-10 16:19:03,195 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=62.3 pTM=0.458 ipTM=0.174 tol=3.25
2024-07-10 16:19:26,216 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=62.3 pTM=0.459 ipTM=0.173 tol=3.18
2024-07-10 16:19:26,217 alphafold2_multimer_v3_model_4_seed_000 took 713.5s (30 recycles)
2024-07-10 16:19:49,856 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=61.6 pTM=0.426 ipTM=0.164
2024-07-10 16:20:12,903 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=61.4 pTM=0.454 ipTM=0.153 tol=14.3
2024-07-10 16:20:35,939 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=61.5 pTM=0.458 ipTM=0.158 tol=7.14
2024-07-10 16:20:58,972 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=61.7 pTM=0.461 ipTM=0.159 tol=5.54
2024-07-10 16:21:22,044 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=61.8 pTM=0.464 ipTM=0.155 tol=4.9
2024-07-10 16:21:45,087 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=61.7 pTM=0.461 ipTM=0.154 tol=5.7
2024-07-10 16:22:08,139 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=61.8 pTM=0.462 ipTM=0.156 tol=5.12
2024-07-10 16:22:31,185 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=61.8 pTM=0.463 ipTM=0.153 tol=3.68
2024-07-10 16:22:54,239 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=61.8 pTM=0.466 ipTM=0.152 tol=3.79
2024-07-10 16:23:17,282 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=61.7 pTM=0.461 ipTM=0.153 tol=7.27
2024-07-10 16:23:40,319 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=61.8 pTM=0.462 ipTM=0.159 tol=5.4
2024-07-10 16:24:03,339 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=61.8 pTM=0.459 ipTM=0.156 tol=4.94
2024-07-10 16:24:26,394 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=61.9 pTM=0.464 ipTM=0.161 tol=3.18
2024-07-10 16:24:49,421 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=61.8 pTM=0.461 ipTM=0.158 tol=2.86
2024-07-10 16:25:12,439 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=61.9 pTM=0.464 ipTM=0.16 tol=2.94
2024-07-10 16:25:35,464 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=61.9 pTM=0.462 ipTM=0.154 tol=3.7
2024-07-10 16:25:58,483 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=61.8 pTM=0.462 ipTM=0.157 tol=2.59
2024-07-10 16:26:21,508 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=61.7 pTM=0.465 ipTM=0.153 tol=2.12
2024-07-10 16:26:44,529 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=61.9 pTM=0.465 ipTM=0.153 tol=2.17
2024-07-10 16:27:07,552 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=61.8 pTM=0.464 ipTM=0.153 tol=2.31
2024-07-10 16:27:30,575 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=61.8 pTM=0.465 ipTM=0.157 tol=2.74
2024-07-10 16:27:53,640 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=61.8 pTM=0.464 ipTM=0.153 tol=2.3
2024-07-10 16:28:16,702 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=61.8 pTM=0.463 ipTM=0.153 tol=5.67
2024-07-10 16:28:39,756 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=61.6 pTM=0.463 ipTM=0.149 tol=4.43
2024-07-10 16:29:02,828 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=61.8 pTM=0.461 ipTM=0.154 tol=5.68
2024-07-10 16:29:25,902 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=61.7 pTM=0.461 ipTM=0.151 tol=5.96
2024-07-10 16:29:48,959 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=61.8 pTM=0.462 ipTM=0.154 tol=5.16
2024-07-10 16:30:12,017 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=61.8 pTM=0.465 ipTM=0.148 tol=9.08
2024-07-10 16:30:35,061 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=61.7 pTM=0.464 ipTM=0.148 tol=6.15
2024-07-10 16:30:58,098 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=61.8 pTM=0.462 ipTM=0.149 tol=5.59
2024-07-10 16:31:21,158 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=61.8 pTM=0.462 ipTM=0.153 tol=2.87
2024-07-10 16:31:21,159 alphafold2_multimer_v3_model_5_seed_000 took 714.3s (30 recycles)
2024-07-10 16:31:21,764 reranking models by 'multimer' metric
2024-07-10 16:31:23,974 Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
2024-07-10 16:32:38,692 Relaxation took 76.9s
2024-07-10 16:32:38,693 rank_001_alphafold2_multimer_v3_model_3_seed_000 pLDDT=61.5 pTM=0.458 ipTM=0.187
2024-07-10 16:34:12,249 Relaxation took 93.6s
2024-07-10 16:34:12,249 rank_002_alphafold2_multimer_v3_model_2_seed_000 pLDDT=63.1 pTM=0.441 ipTM=0.183
2024-07-10 16:35:14,249 Relaxation took 62.0s
2024-07-10 16:35:14,250 rank_003_alphafold2_multimer_v3_model_4_seed_000 pLDDT=62.3 pTM=0.459 ipTM=0.173
2024-07-10 16:36:21,747 Relaxation took 67.5s
2024-07-10 16:36:21,747 rank_004_alphafold2_multimer_v3_model_5_seed_000 pLDDT=61.8 pTM=0.462 ipTM=0.153
2024-07-10 16:37:26,317 Relaxation took 64.6s
2024-07-10 16:37:26,317 rank_005_alphafold2_multimer_v3_model_1_seed_000 pLDDT=62.7 pTM=0.428 ipTM=0.152
2024-07-10 16:37:28,214 Done