2024-07-10 17:34:23,502 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3) 2024-07-10 17:34:23,831 Running on GPU 2024-07-10 17:34:28,318 Found 6 citations for tools or databases 2024-07-10 17:34:28,318 Query 1/1: HSF5_SUMO1 (length 697) 2024-07-10 17:34:28,783 Sleeping for 10s. Reason: PENDING 2024-07-10 17:34:39,718 Sleeping for 9s. Reason: RUNNING 2024-07-10 17:34:49,154 Sleeping for 9s. Reason: RUNNING 2024-07-10 17:34:58,572 Sleeping for 6s. Reason: RUNNING 2024-07-10 17:35:04,992 Sleeping for 5s. Reason: RUNNING 2024-07-10 17:35:10,418 Sleeping for 9s. Reason: RUNNING 2024-07-10 17:35:32,137 Sleeping for 7s. Reason: PENDING 2024-07-10 17:35:39,561 Sleeping for 8s. Reason: RUNNING 2024-07-10 17:35:47,976 Sleeping for 6s. Reason: RUNNING 2024-07-10 17:35:54,415 Sleeping for 10s. Reason: RUNNING 2024-07-10 17:36:08,072 Setting max_seq=508, max_extra_seq=2048 2024-07-10 17:39:07,878 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=39.3 pTM=0.304 ipTM=0.643 2024-07-10 17:39:17,469 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=37.2 pTM=0.305 ipTM=0.341 tol=12.4 2024-07-10 17:39:27,087 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=37.2 pTM=0.304 ipTM=0.35 tol=8.71 2024-07-10 17:39:36,733 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=37.7 pTM=0.314 ipTM=0.418 tol=12.7 2024-07-10 17:39:46,377 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=38.3 pTM=0.325 ipTM=0.482 tol=7.03 2024-07-10 17:39:56,037 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=38.6 pTM=0.334 ipTM=0.547 tol=6.67 2024-07-10 17:40:05,721 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=38.7 pTM=0.335 ipTM=0.558 tol=4.5 2024-07-10 17:40:15,394 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=39.1 pTM=0.338 ipTM=0.571 tol=3.64 2024-07-10 17:40:25,097 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=38.8 pTM=0.336 ipTM=0.569 tol=3.65 2024-07-10 17:40:34,786 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=38.9 pTM=0.338 ipTM=0.581 tol=2.54 2024-07-10 17:40:44,481 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=38.7 pTM=0.337 ipTM=0.577 tol=6.25 2024-07-10 17:40:54,171 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=38.6 pTM=0.335 ipTM=0.564 tol=3.22 2024-07-10 17:41:03,900 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=39 pTM=0.339 ipTM=0.582 tol=6.64 2024-07-10 17:41:13,617 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=38.9 pTM=0.341 ipTM=0.594 tol=2.9 2024-07-10 17:41:23,327 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=38.8 pTM=0.34 ipTM=0.583 tol=6.14 2024-07-10 17:41:33,050 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=38.9 pTM=0.34 ipTM=0.581 tol=5.47 2024-07-10 17:41:42,772 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=38.9 pTM=0.34 ipTM=0.587 tol=1.96 2024-07-10 17:41:52,488 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=38.8 pTM=0.342 ipTM=0.596 tol=5.68 2024-07-10 17:42:02,227 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=38.8 pTM=0.339 ipTM=0.576 tol=2.91 2024-07-10 17:42:11,939 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=39.2 pTM=0.344 ipTM=0.597 tol=6.5 2024-07-10 17:42:21,653 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=39.1 pTM=0.342 ipTM=0.59 tol=2.44 2024-07-10 17:42:31,363 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=39.2 pTM=0.344 ipTM=0.607 tol=3.33 2024-07-10 17:42:41,086 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=39.3 pTM=0.347 ipTM=0.616 tol=2.14 2024-07-10 17:42:50,806 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=39.3 pTM=0.346 ipTM=0.612 tol=7.25 2024-07-10 17:43:00,522 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=38.9 pTM=0.342 ipTM=0.595 tol=6.65 2024-07-10 17:43:10,233 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=39 pTM=0.345 ipTM=0.617 tol=2.79 2024-07-10 17:43:19,952 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=39.1 pTM=0.344 ipTM=0.612 tol=2.24 2024-07-10 17:43:29,658 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=39.1 pTM=0.346 ipTM=0.613 tol=2.91 2024-07-10 17:43:39,384 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=39 pTM=0.344 ipTM=0.612 tol=6.12 2024-07-10 17:43:49,102 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=39 pTM=0.345 ipTM=0.619 tol=5.16 2024-07-10 17:43:58,821 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=39.3 pTM=0.345 ipTM=0.621 tol=5.86 2024-07-10 17:43:58,822 alphafold2_multimer_v3_model_1_seed_000 took 465.5s (30 recycles) 2024-07-10 17:44:08,859 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=39.7 pTM=0.365 ipTM=0.581 2024-07-10 17:44:18,594 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=41.4 pTM=0.387 ipTM=0.769 tol=11.5 2024-07-10 17:44:28,338 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=41.1 pTM=0.383 ipTM=0.726 tol=6.31 2024-07-10 17:44:38,080 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=41.1 pTM=0.381 ipTM=0.745 tol=4.51 2024-07-10 17:44:47,843 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=41.1 pTM=0.382 ipTM=0.726 tol=5.02 2024-07-10 17:44:57,599 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=40.9 pTM=0.382 ipTM=0.751 tol=5.45 2024-07-10 17:45:07,357 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=41 pTM=0.382 ipTM=0.734 tol=7.77 2024-07-10 17:45:17,119 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=41.2 pTM=0.384 ipTM=0.754 tol=2.6 2024-07-10 17:45:26,869 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=40.9 pTM=0.381 ipTM=0.726 tol=3.08 2024-07-10 17:45:36,634 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=41.2 pTM=0.382 ipTM=0.745 tol=3.87 2024-07-10 17:45:46,383 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=41.2 pTM=0.384 ipTM=0.729 tol=3.61 2024-07-10 17:45:56,147 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=41.3 pTM=0.385 ipTM=0.747 tol=3.44 2024-07-10 17:46:05,891 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=41.3 pTM=0.384 ipTM=0.732 tol=4.23 2024-07-10 17:46:15,657 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=41 pTM=0.383 ipTM=0.746 tol=10 2024-07-10 17:46:25,418 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=41.2 pTM=0.385 ipTM=0.741 tol=3.52 2024-07-10 17:46:35,175 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=41 pTM=0.383 ipTM=0.748 tol=3.86 2024-07-10 17:46:44,933 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=40.8 pTM=0.382 ipTM=0.728 tol=7.68 2024-07-10 17:46:54,689 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=40.9 pTM=0.383 ipTM=0.749 tol=9.73 2024-07-10 17:47:04,448 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=40.8 pTM=0.381 ipTM=0.727 tol=11.1 2024-07-10 17:47:14,221 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=40.9 pTM=0.382 ipTM=0.747 tol=7.66 2024-07-10 17:47:23,978 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=41.1 pTM=0.383 ipTM=0.737 tol=8.31 2024-07-10 17:47:33,739 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=40.8 pTM=0.382 ipTM=0.749 tol=3.32 2024-07-10 17:47:43,493 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=40.9 pTM=0.385 ipTM=0.74 tol=4.36 2024-07-10 17:47:53,250 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=40.8 pTM=0.381 ipTM=0.743 tol=6.55 2024-07-10 17:48:03,005 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=40.8 pTM=0.383 ipTM=0.74 tol=3.27 2024-07-10 17:48:12,762 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=41 pTM=0.382 ipTM=0.749 tol=2.7 2024-07-10 17:48:22,520 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=40.8 pTM=0.38 ipTM=0.73 tol=6.99 2024-07-10 17:48:32,282 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=40.9 pTM=0.381 ipTM=0.737 tol=4.29 2024-07-10 17:48:42,043 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=40.9 pTM=0.383 ipTM=0.738 tol=3.29 2024-07-10 17:48:51,817 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=41.1 pTM=0.381 ipTM=0.743 tol=6.82 2024-07-10 17:49:01,571 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=40.9 pTM=0.382 ipTM=0.73 tol=7.75 2024-07-10 17:49:01,572 alphafold2_multimer_v3_model_2_seed_000 took 302.4s (30 recycles) 2024-07-10 17:49:11,682 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=37.9 pTM=0.309 ipTM=0.354 2024-07-10 17:49:21,490 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=37.4 pTM=0.29 ipTM=0.367 tol=17.5 2024-07-10 17:49:31,276 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=38.1 pTM=0.323 ipTM=0.437 tol=15.8 2024-07-10 17:49:41,081 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=38.9 pTM=0.338 ipTM=0.532 tol=8.75 2024-07-10 17:49:50,882 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=39.6 pTM=0.345 ipTM=0.566 tol=9.19 2024-07-10 17:50:00,713 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=40.2 pTM=0.354 ipTM=0.612 tol=4.65 2024-07-10 17:50:10,531 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=40.5 pTM=0.355 ipTM=0.618 tol=9 2024-07-10 17:50:20,350 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=40.5 pTM=0.359 ipTM=0.644 tol=8.27 2024-07-10 17:50:30,167 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=40.5 pTM=0.361 ipTM=0.659 tol=5.07 2024-07-10 17:50:39,987 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=40.6 pTM=0.367 ipTM=0.681 tol=8.37 2024-07-10 17:50:49,826 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=40.7 pTM=0.365 ipTM=0.668 tol=6.07 2024-07-10 17:50:59,658 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=40.6 pTM=0.362 ipTM=0.661 tol=7.05 2024-07-10 17:51:09,467 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=40.7 pTM=0.365 ipTM=0.667 tol=3.55 2024-07-10 17:51:19,292 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=40.7 pTM=0.363 ipTM=0.663 tol=7.71 2024-07-10 17:51:29,105 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=40.5 pTM=0.361 ipTM=0.664 tol=8.28 2024-07-10 17:51:38,933 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=40.4 pTM=0.357 ipTM=0.643 tol=5.68 2024-07-10 17:51:48,774 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=40.4 pTM=0.357 ipTM=0.65 tol=4.54 2024-07-10 17:51:58,598 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=40.3 pTM=0.357 ipTM=0.64 tol=3.92 2024-07-10 17:52:08,425 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=39.8 pTM=0.347 ipTM=0.592 tol=3.71 2024-07-10 17:52:18,259 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=40 pTM=0.353 ipTM=0.617 tol=3.93 2024-07-10 17:52:28,096 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=40.5 pTM=0.356 ipTM=0.63 tol=11.3 2024-07-10 17:52:37,927 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=40.1 pTM=0.354 ipTM=0.629 tol=6.25 2024-07-10 17:52:47,740 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=40.2 pTM=0.357 ipTM=0.642 tol=11.2 2024-07-10 17:52:57,567 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=40.3 pTM=0.357 ipTM=0.637 tol=8.32 2024-07-10 17:53:07,399 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=40.2 pTM=0.354 ipTM=0.624 tol=8.35 2024-07-10 17:53:17,201 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=40.1 pTM=0.361 ipTM=0.648 tol=9.57 2024-07-10 17:53:27,018 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=40.2 pTM=0.353 ipTM=0.61 tol=8.63 2024-07-10 17:53:36,839 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=40.5 pTM=0.362 ipTM=0.636 tol=7.66 2024-07-10 17:53:46,656 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=40.4 pTM=0.357 ipTM=0.613 tol=6.88 2024-07-10 17:53:56,455 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=39.9 pTM=0.355 ipTM=0.613 tol=2.4 2024-07-10 17:54:06,261 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=40.2 pTM=0.356 ipTM=0.607 tol=2.6 2024-07-10 17:54:06,261 alphafold2_multimer_v3_model_3_seed_000 took 304.4s (30 recycles) 2024-07-10 17:54:16,337 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=37.7 pTM=0.305 ipTM=0.397 2024-07-10 17:54:26,110 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=37.2 pTM=0.3 ipTM=0.314 tol=14.2 2024-07-10 17:54:35,882 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=38.7 pTM=0.328 ipTM=0.469 tol=14.9 2024-07-10 17:54:45,660 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=39.2 pTM=0.33 ipTM=0.481 tol=13.2 2024-07-10 17:54:55,441 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=40.1 pTM=0.344 ipTM=0.56 tol=6.04 2024-07-10 17:55:05,218 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=40.5 pTM=0.355 ipTM=0.62 tol=4.84 2024-07-10 17:55:14,997 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=41 pTM=0.359 ipTM=0.636 tol=5.28 2024-07-10 17:55:24,779 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=41.1 pTM=0.364 ipTM=0.662 tol=4.95 2024-07-10 17:55:34,540 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=40.9 pTM=0.364 ipTM=0.657 tol=5.62 2024-07-10 17:55:44,328 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=41.3 pTM=0.368 ipTM=0.672 tol=4.48 2024-07-10 17:55:54,103 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=41 pTM=0.369 ipTM=0.671 tol=4.54 2024-07-10 17:56:03,880 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=41.3 pTM=0.369 ipTM=0.667 tol=3.98 2024-07-10 17:56:13,657 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=41.8 pTM=0.375 ipTM=0.691 tol=3.21 2024-07-10 17:56:23,432 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=41.8 pTM=0.378 ipTM=0.703 tol=3.73 2024-07-10 17:56:33,207 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=41.9 pTM=0.379 ipTM=0.709 tol=3.88 2024-07-10 17:56:42,980 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=41.7 pTM=0.378 ipTM=0.721 tol=4.17 2024-07-10 17:56:52,761 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=41.8 pTM=0.379 ipTM=0.735 tol=3.29 2024-07-10 17:57:02,531 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=42.2 pTM=0.385 ipTM=0.755 tol=3.72 2024-07-10 17:57:12,322 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=42 pTM=0.382 ipTM=0.759 tol=3.4 2024-07-10 17:57:22,086 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=42 pTM=0.381 ipTM=0.757 tol=2.72 2024-07-10 17:57:31,873 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=42 pTM=0.38 ipTM=0.761 tol=2.83 2024-07-10 17:57:41,650 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=42.2 pTM=0.383 ipTM=0.768 tol=3.07 2024-07-10 17:57:51,416 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=42 pTM=0.382 ipTM=0.769 tol=2.9 2024-07-10 17:58:01,205 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=42 pTM=0.381 ipTM=0.763 tol=2.22 2024-07-10 17:58:10,996 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=42 pTM=0.381 ipTM=0.766 tol=2.11 2024-07-10 17:58:20,780 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=42.1 pTM=0.381 ipTM=0.767 tol=2.59 2024-07-10 17:58:30,556 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=42.2 pTM=0.383 ipTM=0.768 tol=2 2024-07-10 17:58:40,331 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=42.2 pTM=0.384 ipTM=0.773 tol=1.94 2024-07-10 17:58:50,112 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=42 pTM=0.379 ipTM=0.768 tol=7.38 2024-07-10 17:58:59,904 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=42.1 pTM=0.38 ipTM=0.762 tol=5.45 2024-07-10 17:59:09,688 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=42.4 pTM=0.383 ipTM=0.762 tol=6.94 2024-07-10 17:59:09,689 alphafold2_multimer_v3_model_4_seed_000 took 303.1s (30 recycles) 2024-07-10 17:59:19,845 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=38.2 pTM=0.316 ipTM=0.407 2024-07-10 17:59:29,678 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=37.8 pTM=0.294 ipTM=0.314 tol=14.5 2024-07-10 17:59:39,522 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=39.2 pTM=0.333 ipTM=0.483 tol=11.9 2024-07-10 17:59:49,374 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=40.5 pTM=0.361 ipTM=0.671 tol=9.02 2024-07-10 17:59:59,210 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=41 pTM=0.365 ipTM=0.689 tol=6.84 2024-07-10 18:00:09,053 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=40.9 pTM=0.366 ipTM=0.689 tol=3.35 2024-07-10 18:00:18,921 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=40.9 pTM=0.367 ipTM=0.69 tol=7.34 2024-07-10 18:00:28,769 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=41.2 pTM=0.367 ipTM=0.694 tol=4.95 2024-07-10 18:00:38,624 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=41.1 pTM=0.369 ipTM=0.698 tol=7.66 2024-07-10 18:00:48,481 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=41 pTM=0.368 ipTM=0.696 tol=2.51 2024-07-10 18:00:58,339 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=41.1 pTM=0.371 ipTM=0.71 tol=6.68 2024-07-10 18:01:08,198 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=41.3 pTM=0.37 ipTM=0.712 tol=6.63 2024-07-10 18:01:18,030 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=41.4 pTM=0.373 ipTM=0.713 tol=6.19 2024-07-10 18:01:27,871 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=41.1 pTM=0.37 ipTM=0.711 tol=3.09 2024-07-10 18:01:37,722 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=41.1 pTM=0.37 ipTM=0.711 tol=2.21 2024-07-10 18:01:47,553 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=41 pTM=0.369 ipTM=0.704 tol=9.8 2024-07-10 18:01:57,390 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=41.1 pTM=0.371 ipTM=0.724 tol=8.95 2024-07-10 18:02:07,235 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=41.1 pTM=0.373 ipTM=0.726 tol=2.81 2024-07-10 18:02:17,097 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=41 pTM=0.369 ipTM=0.711 tol=7.51 2024-07-10 18:02:26,950 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=41.1 pTM=0.368 ipTM=0.71 tol=7 2024-07-10 18:02:36,808 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=41.3 pTM=0.372 ipTM=0.72 tol=2.33 2024-07-10 18:02:46,656 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=41.1 pTM=0.369 ipTM=0.709 tol=6.12 2024-07-10 18:02:56,496 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=41.2 pTM=0.369 ipTM=0.708 tol=6.05 2024-07-10 18:03:06,342 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=40.8 pTM=0.366 ipTM=0.704 tol=6.56 2024-07-10 18:03:16,197 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=41.1 pTM=0.369 ipTM=0.714 tol=6.91 2024-07-10 18:03:26,053 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=41.1 pTM=0.37 ipTM=0.724 tol=2.46 2024-07-10 18:03:35,907 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=40.9 pTM=0.367 ipTM=0.708 tol=3.7 2024-07-10 18:03:45,741 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=41.1 pTM=0.37 ipTM=0.711 tol=4.37 2024-07-10 18:03:55,589 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=41.1 pTM=0.368 ipTM=0.707 tol=4.82 2024-07-10 18:04:05,426 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=40.8 pTM=0.366 ipTM=0.702 tol=3.47 2024-07-10 18:04:15,278 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=41.1 pTM=0.367 ipTM=0.705 tol=4.58 2024-07-10 18:04:15,279 alphafold2_multimer_v3_model_5_seed_000 took 305.3s (30 recycles) 2024-07-10 18:04:15,592 reranking models by 'multimer' metric 2024-07-10 18:04:18,999 Warning: importing 'simtk.openmm' is deprecated. Import 'openmm' instead. 2024-07-10 18:05:05,668 Relaxation took 50.1s 2024-07-10 18:05:05,668 rank_001_alphafold2_multimer_v3_model_4_seed_000 pLDDT=42.4 pTM=0.383 ipTM=0.762 2024-07-10 18:05:50,799 Relaxation took 45.1s 2024-07-10 18:05:50,799 rank_002_alphafold2_multimer_v3_model_2_seed_000 pLDDT=40.9 pTM=0.382 ipTM=0.73 2024-07-10 18:06:33,170 Relaxation took 42.4s 2024-07-10 18:06:33,170 rank_003_alphafold2_multimer_v3_model_5_seed_000 pLDDT=41.1 pTM=0.367 ipTM=0.705 2024-07-10 18:07:24,635 Relaxation took 51.5s 2024-07-10 18:07:24,636 rank_004_alphafold2_multimer_v3_model_1_seed_000 pLDDT=39.3 pTM=0.345 ipTM=0.621 2024-07-10 18:08:09,899 Relaxation took 45.3s 2024-07-10 18:08:09,899 rank_005_alphafold2_multimer_v3_model_3_seed_000 pLDDT=40.2 pTM=0.356 ipTM=0.607 2024-07-10 18:08:11,220 Done