2024-07-10 17:38:47,585 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3) 2024-07-10 17:38:47,896 Running on GPU 2024-07-10 17:38:51,684 Found 6 citations for tools or databases 2024-07-10 17:38:51,685 Query 1/1: HSP77_LONF1 (length 1140) 2024-07-10 17:38:52,160 Sleeping for 8s. Reason: PENDING 2024-07-10 17:39:00,603 Sleeping for 5s. Reason: RUNNING 2024-07-10 17:39:06,030 Sleeping for 8s. Reason: RUNNING 2024-07-10 17:39:14,445 Sleeping for 5s. Reason: RUNNING 2024-07-10 17:39:19,857 Sleeping for 7s. Reason: RUNNING 2024-07-10 17:39:27,283 Sleeping for 5s. Reason: RUNNING 2024-07-10 17:39:32,722 Sleeping for 6s. Reason: RUNNING 2024-07-10 17:39:39,171 Sleeping for 8s. Reason: RUNNING 2024-07-10 17:39:47,620 Sleeping for 10s. Reason: RUNNING 2024-07-10 17:39:58,542 Sleeping for 10s. Reason: RUNNING 2024-07-10 17:40:08,980 Sleeping for 6s. Reason: RUNNING 2024-07-10 17:40:15,398 Sleeping for 7s. Reason: RUNNING 2024-07-10 17:40:22,826 Sleeping for 9s. Reason: RUNNING 2024-07-10 17:40:32,277 Sleeping for 9s. Reason: RUNNING 2024-07-10 17:40:41,706 Sleeping for 9s. Reason: RUNNING 2024-07-10 17:40:51,144 Sleeping for 9s. Reason: RUNNING 2024-07-10 17:41:00,577 Sleeping for 6s. Reason: RUNNING 2024-07-10 17:41:07,004 Sleeping for 6s. Reason: RUNNING 2024-07-10 17:41:13,426 Sleeping for 10s. Reason: RUNNING 2024-07-10 17:41:23,870 Sleeping for 7s. Reason: RUNNING 2024-07-10 17:41:31,316 Sleeping for 8s. Reason: RUNNING 2024-07-10 17:41:39,724 Sleeping for 10s. Reason: RUNNING 2024-07-10 17:41:50,468 Sleeping for 6s. Reason: RUNNING 2024-07-10 17:41:56,896 Sleeping for 5s. Reason: RUNNING 2024-07-10 17:42:02,320 Sleeping for 6s. Reason: RUNNING 2024-07-10 17:42:08,737 Sleeping for 5s. Reason: RUNNING 2024-07-10 17:42:14,930 Sleeping for 7s. Reason: RUNNING 2024-07-10 17:42:22,346 Sleeping for 9s. Reason: RUNNING 2024-07-10 17:43:16,984 Sleeping for 8s. Reason: PENDING 2024-07-10 17:43:25,408 Sleeping for 9s. Reason: RUNNING 2024-07-10 17:43:34,833 Sleeping for 10s. Reason: RUNNING 2024-07-10 17:43:45,264 Sleeping for 10s. Reason: RUNNING 2024-07-10 17:43:55,701 Sleeping for 10s. Reason: RUNNING 2024-07-10 17:44:06,135 Sleeping for 6s. Reason: RUNNING 2024-07-10 17:44:12,558 Sleeping for 5s. Reason: RUNNING 2024-07-10 17:44:17,977 Sleeping for 5s. Reason: RUNNING 2024-07-10 17:44:23,397 Sleeping for 10s. Reason: RUNNING 2024-07-10 17:44:33,848 Sleeping for 8s. Reason: RUNNING 2024-07-10 17:44:42,279 Sleeping for 5s. Reason: RUNNING 2024-07-10 17:44:47,712 Sleeping for 8s. Reason: RUNNING 2024-07-10 17:44:56,139 Sleeping for 10s. Reason: RUNNING 2024-07-10 17:45:06,574 Sleeping for 8s. Reason: RUNNING 2024-07-10 17:45:14,993 Sleeping for 10s. Reason: RUNNING 2024-07-10 17:45:25,417 Sleeping for 7s. Reason: RUNNING 2024-07-10 17:45:38,251 Setting max_seq=508, max_extra_seq=2048 2024-07-10 17:48:14,437 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=70.9 pTM=0.542 ipTM=0.317 2024-07-10 17:48:44,221 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=71.5 pTM=0.54 ipTM=0.257 tol=3.82 2024-07-10 17:49:14,099 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=71.1 pTM=0.55 ipTM=0.257 tol=2.28 2024-07-10 17:49:44,071 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=71.4 pTM=0.553 ipTM=0.264 tol=2.08 2024-07-10 17:50:14,106 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=71.4 pTM=0.554 ipTM=0.274 tol=1.65 2024-07-10 17:50:44,220 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=71.7 pTM=0.561 ipTM=0.294 tol=2.54 2024-07-10 17:51:14,373 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=71.8 pTM=0.558 ipTM=0.286 tol=4.1 2024-07-10 17:51:44,545 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=72 pTM=0.565 ipTM=0.296 tol=2.76 2024-07-10 17:52:14,740 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=72.2 pTM=0.567 ipTM=0.306 tol=1.58 2024-07-10 17:52:44,947 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=72.1 pTM=0.566 ipTM=0.302 tol=1.25 2024-07-10 17:53:15,163 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=72.1 pTM=0.566 ipTM=0.304 tol=1.54 2024-07-10 17:53:45,373 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=72.1 pTM=0.563 ipTM=0.288 tol=1.7 2024-07-10 17:54:15,570 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=72.3 pTM=0.569 ipTM=0.305 tol=1.91 2024-07-10 17:54:45,739 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=72.2 pTM=0.571 ipTM=0.318 tol=2.07 2024-07-10 17:55:15,908 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=72.2 pTM=0.573 ipTM=0.326 tol=2.07 2024-07-10 17:55:46,075 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=72.1 pTM=0.565 ipTM=0.302 tol=1.94 2024-07-10 17:56:16,254 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=72.1 pTM=0.563 ipTM=0.297 tol=2.42 2024-07-10 17:56:46,410 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=72 pTM=0.564 ipTM=0.294 tol=2.12 2024-07-10 17:57:16,598 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=72.3 pTM=0.564 ipTM=0.288 tol=1.54 2024-07-10 17:57:46,766 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=72.2 pTM=0.562 ipTM=0.292 tol=1.77 2024-07-10 17:58:16,930 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=72.1 pTM=0.561 ipTM=0.291 tol=2.75 2024-07-10 17:58:47,101 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=71.9 pTM=0.563 ipTM=0.294 tol=2.52 2024-07-10 17:59:17,297 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=72.1 pTM=0.566 ipTM=0.307 tol=2.22 2024-07-10 17:59:47,491 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=72.2 pTM=0.563 ipTM=0.287 tol=2.25 2024-07-10 18:00:17,696 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=72.2 pTM=0.562 ipTM=0.289 tol=2.57 2024-07-10 18:00:47,902 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=72 pTM=0.569 ipTM=0.311 tol=2.55 2024-07-10 18:01:18,119 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=72.1 pTM=0.564 ipTM=0.293 tol=1.34 2024-07-10 18:01:48,325 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=72.1 pTM=0.562 ipTM=0.296 tol=1.57 2024-07-10 18:02:18,525 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=72.3 pTM=0.569 ipTM=0.309 tol=2.21 2024-07-10 18:02:48,718 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=72.1 pTM=0.56 ipTM=0.29 tol=2.36 2024-07-10 18:03:18,932 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=71.9 pTM=0.559 ipTM=0.282 tol=2.63 2024-07-10 18:03:18,933 alphafold2_multimer_v3_model_1_seed_000 took 1055.8s (30 recycles) 2024-07-10 18:03:49,930 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=70.4 pTM=0.523 ipTM=0.276 2024-07-10 18:04:20,172 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=71.3 pTM=0.531 ipTM=0.255 tol=6.98 2024-07-10 18:04:50,371 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=72.9 pTM=0.57 ipTM=0.356 tol=9.61 2024-07-10 18:05:20,604 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=72.7 pTM=0.549 ipTM=0.263 tol=4.9 2024-07-10 18:05:50,901 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=72.6 pTM=0.547 ipTM=0.246 tol=5.95 2024-07-10 18:06:21,155 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=72.7 pTM=0.553 ipTM=0.271 tol=3.26 2024-07-10 18:06:51,419 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=72.6 pTM=0.553 ipTM=0.265 tol=2.79 2024-07-10 18:07:21,691 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=72.9 pTM=0.56 ipTM=0.291 tol=3.12 2024-07-10 18:07:51,933 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=73.1 pTM=0.566 ipTM=0.309 tol=3.61 2024-07-10 18:08:22,158 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=73.3 pTM=0.573 ipTM=0.333 tol=3.34 2024-07-10 18:08:52,379 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=73.3 pTM=0.582 ipTM=0.359 tol=2.39 2024-07-10 18:09:22,597 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=73.4 pTM=0.586 ipTM=0.371 tol=1.6 2024-07-10 18:09:52,816 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=73.6 pTM=0.592 ipTM=0.394 tol=1.05 2024-07-10 18:10:23,030 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=73.8 pTM=0.61 ipTM=0.441 tol=1.28 2024-07-10 18:10:53,243 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=73.8 pTM=0.599 ipTM=0.409 tol=1.41 2024-07-10 18:11:23,443 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=73.7 pTM=0.609 ipTM=0.444 tol=1.01 2024-07-10 18:11:53,634 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=73.9 pTM=0.61 ipTM=0.441 tol=1.44 2024-07-10 18:12:23,823 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=73.9 pTM=0.613 ipTM=0.447 tol=0.812 2024-07-10 18:12:54,008 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=74.2 pTM=0.624 ipTM=0.475 tol=0.829 2024-07-10 18:13:24,219 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=74.2 pTM=0.632 ipTM=0.507 tol=0.878 2024-07-10 18:13:54,446 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=74.1 pTM=0.619 ipTM=0.463 tol=1.42 2024-07-10 18:14:24,663 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=74.1 pTM=0.629 ipTM=0.5 tol=1.03 2024-07-10 18:14:54,901 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=74 pTM=0.625 ipTM=0.484 tol=1.04 2024-07-10 18:15:25,139 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=74 pTM=0.624 ipTM=0.474 tol=0.614 2024-07-10 18:15:55,390 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=74 pTM=0.623 ipTM=0.478 tol=0.73 2024-07-10 18:16:25,625 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=73.9 pTM=0.625 ipTM=0.487 tol=1.26 2024-07-10 18:16:55,890 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=73.8 pTM=0.621 ipTM=0.467 tol=0.705 2024-07-10 18:17:26,151 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=74 pTM=0.627 ipTM=0.492 tol=0.808 2024-07-10 18:17:56,409 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=74.2 pTM=0.629 ipTM=0.492 tol=0.972 2024-07-10 18:18:26,649 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=74.2 pTM=0.634 ipTM=0.513 tol=0.785 2024-07-10 18:18:56,895 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=74.2 pTM=0.633 ipTM=0.504 tol=0.832 2024-07-10 18:18:56,896 alphafold2_multimer_v3_model_2_seed_000 took 937.2s (30 recycles) 2024-07-10 18:19:27,957 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=69.8 pTM=0.514 ipTM=0.244 2024-07-10 18:19:58,197 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=70 pTM=0.522 ipTM=0.252 tol=12.4 2024-07-10 18:20:28,454 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=70.4 pTM=0.529 ipTM=0.24 tol=11.1 2024-07-10 18:20:58,702 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=70.8 pTM=0.539 ipTM=0.238 tol=5.66 2024-07-10 18:21:28,921 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=71.2 pTM=0.543 ipTM=0.237 tol=3.45 2024-07-10 18:21:59,157 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=71.1 pTM=0.548 ipTM=0.246 tol=2.86 2024-07-10 18:22:29,402 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=71.2 pTM=0.55 ipTM=0.249 tol=4.04 2024-07-10 18:22:59,648 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=71.3 pTM=0.549 ipTM=0.243 tol=4.43 2024-07-10 18:23:29,874 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=71.5 pTM=0.554 ipTM=0.251 tol=3.3 2024-07-10 18:24:00,120 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=71.4 pTM=0.55 ipTM=0.244 tol=3.11 2024-07-10 18:24:30,362 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=71.5 pTM=0.553 ipTM=0.255 tol=1.87 2024-07-10 18:25:00,607 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=71.4 pTM=0.55 ipTM=0.245 tol=1.88 2024-07-10 18:25:30,822 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=71.6 pTM=0.553 ipTM=0.252 tol=2.18 2024-07-10 18:26:00,995 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=71.6 pTM=0.552 ipTM=0.253 tol=2.49 2024-07-10 18:26:31,162 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=71.5 pTM=0.556 ipTM=0.261 tol=2.78 2024-07-10 18:27:01,351 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=71.4 pTM=0.55 ipTM=0.247 tol=2.15 2024-07-10 18:27:31,535 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=71.3 pTM=0.552 ipTM=0.252 tol=3.46 2024-07-10 18:28:01,694 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=71.3 pTM=0.552 ipTM=0.252 tol=2.78 2024-07-10 18:28:31,864 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=71.9 pTM=0.557 ipTM=0.265 tol=3.15 2024-07-10 18:29:02,004 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=71.9 pTM=0.564 ipTM=0.288 tol=1.54 2024-07-10 18:29:32,138 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=71.9 pTM=0.565 ipTM=0.294 tol=3.48 2024-07-10 18:30:02,303 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=71.7 pTM=0.561 ipTM=0.279 tol=1.57 2024-07-10 18:30:32,441 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=71.8 pTM=0.571 ipTM=0.313 tol=2.25 2024-07-10 18:31:02,618 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=71.8 pTM=0.561 ipTM=0.276 tol=2.28 2024-07-10 18:31:32,772 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=71.6 pTM=0.563 ipTM=0.286 tol=2.18 2024-07-10 18:32:02,939 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=71.4 pTM=0.558 ipTM=0.271 tol=2.55 2024-07-10 18:32:33,077 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=71.4 pTM=0.557 ipTM=0.266 tol=2.43 2024-07-10 18:33:03,211 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=71.6 pTM=0.552 ipTM=0.255 tol=2.18 2024-07-10 18:33:33,330 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=71.5 pTM=0.555 ipTM=0.264 tol=2.68 2024-07-10 18:34:03,471 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=71.4 pTM=0.555 ipTM=0.258 tol=2.08 2024-07-10 18:34:33,624 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=71.4 pTM=0.552 ipTM=0.254 tol=1.48 2024-07-10 18:34:33,625 alphafold2_multimer_v3_model_3_seed_000 took 935.9s (30 recycles) 2024-07-10 18:35:04,484 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=68 pTM=0.511 ipTM=0.308 2024-07-10 18:35:34,588 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=69.1 pTM=0.53 ipTM=0.279 tol=4.55 2024-07-10 18:36:04,715 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=69.5 pTM=0.546 ipTM=0.264 tol=2.43 2024-07-10 18:36:34,823 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=70.6 pTM=0.573 ipTM=0.345 tol=2.37 2024-07-10 18:37:04,970 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=70.2 pTM=0.558 ipTM=0.289 tol=1.47 2024-07-10 18:37:35,134 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=70.2 pTM=0.565 ipTM=0.31 tol=1.67 2024-07-10 18:38:05,330 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=70.1 pTM=0.558 ipTM=0.285 tol=1.23 2024-07-10 18:38:35,501 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=70.4 pTM=0.565 ipTM=0.304 tol=1.11 2024-07-10 18:39:05,677 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=70.7 pTM=0.565 ipTM=0.304 tol=1.46 2024-07-10 18:39:35,853 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=70.6 pTM=0.568 ipTM=0.31 tol=1.31 2024-07-10 18:40:06,012 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=70.4 pTM=0.561 ipTM=0.291 tol=2.15 2024-07-10 18:40:36,140 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=70.4 pTM=0.561 ipTM=0.289 tol=1.18 2024-07-10 18:41:06,276 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=70.2 pTM=0.56 ipTM=0.283 tol=0.926 2024-07-10 18:41:36,408 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=70.2 pTM=0.56 ipTM=0.285 tol=1.45 2024-07-10 18:42:06,537 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=70.4 pTM=0.561 ipTM=0.283 tol=1.18 2024-07-10 18:42:36,642 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=70.4 pTM=0.561 ipTM=0.29 tol=0.735 2024-07-10 18:43:06,776 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=70.2 pTM=0.56 ipTM=0.284 tol=0.606 2024-07-10 18:43:36,897 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=70.1 pTM=0.561 ipTM=0.292 tol=0.677 2024-07-10 18:44:06,986 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=70.8 pTM=0.567 ipTM=0.302 tol=1.13 2024-07-10 18:44:37,090 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=70.7 pTM=0.567 ipTM=0.306 tol=0.664 2024-07-10 18:45:07,180 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=70.2 pTM=0.561 ipTM=0.289 tol=1.15 2024-07-10 18:45:37,272 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=70.4 pTM=0.561 ipTM=0.289 tol=0.999 2024-07-10 18:46:07,362 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=70.4 pTM=0.563 ipTM=0.291 tol=0.883 2024-07-10 18:46:37,456 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=70.6 pTM=0.563 ipTM=0.29 tol=0.797 2024-07-10 18:47:07,542 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=70.3 pTM=0.562 ipTM=0.287 tol=0.906 2024-07-10 18:47:37,638 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=70.3 pTM=0.561 ipTM=0.284 tol=0.776 2024-07-10 18:48:07,738 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=69.9 pTM=0.56 ipTM=0.279 tol=0.776 2024-07-10 18:48:37,830 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=70.1 pTM=0.56 ipTM=0.284 tol=0.834 2024-07-10 18:49:07,942 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=70 pTM=0.56 ipTM=0.283 tol=0.695 2024-07-10 18:49:38,068 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=70.3 pTM=0.56 ipTM=0.28 tol=1.03 2024-07-10 18:50:08,175 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=69.7 pTM=0.558 ipTM=0.275 tol=1.27 2024-07-10 18:50:08,176 alphafold2_multimer_v3_model_4_seed_000 took 933.8s (30 recycles) 2024-07-10 18:50:39,089 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=68.1 pTM=0.529 ipTM=0.276 2024-07-10 18:51:09,207 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=70.4 pTM=0.533 ipTM=0.267 tol=12.3 2024-07-10 18:51:39,346 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=69.9 pTM=0.528 ipTM=0.254 tol=7.52 2024-07-10 18:52:09,489 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=70 pTM=0.54 ipTM=0.256 tol=4.67 2024-07-10 18:52:39,663 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=70.2 pTM=0.544 ipTM=0.255 tol=2.75 2024-07-10 18:53:09,866 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=70.1 pTM=0.549 ipTM=0.257 tol=1.56 2024-07-10 18:53:40,066 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=70.4 pTM=0.552 ipTM=0.256 tol=3.52 2024-07-10 18:54:10,222 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=70.8 pTM=0.562 ipTM=0.281 tol=2.62 2024-07-10 18:54:40,378 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=70.9 pTM=0.565 ipTM=0.284 tol=1.88 2024-07-10 18:55:10,555 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=70.7 pTM=0.563 ipTM=0.273 tol=2.74 2024-07-10 18:55:40,759 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=70.6 pTM=0.562 ipTM=0.269 tol=2.97 2024-07-10 18:56:11,001 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=70.4 pTM=0.559 ipTM=0.266 tol=2.47 2024-07-10 18:56:41,276 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=70.6 pTM=0.558 ipTM=0.252 tol=3.79 2024-07-10 18:57:11,550 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=70.4 pTM=0.557 ipTM=0.258 tol=3.29 2024-07-10 18:57:41,790 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=70.6 pTM=0.563 ipTM=0.273 tol=4.11 2024-07-10 18:58:12,039 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=70.6 pTM=0.559 ipTM=0.265 tol=2.07 2024-07-10 18:58:42,328 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=70.3 pTM=0.56 ipTM=0.264 tol=2.21 2024-07-10 18:59:12,585 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=70.6 pTM=0.557 ipTM=0.26 tol=3.37 2024-07-10 18:59:42,860 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=70.7 pTM=0.562 ipTM=0.27 tol=3.25 2024-07-10 19:00:13,114 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=70.6 pTM=0.558 ipTM=0.265 tol=2.84 2024-07-10 19:00:43,401 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=70.6 pTM=0.559 ipTM=0.265 tol=2.4 2024-07-10 19:01:13,677 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=70.4 pTM=0.56 ipTM=0.267 tol=2.47 2024-07-10 19:01:43,942 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=70.6 pTM=0.559 ipTM=0.264 tol=4.35 2024-07-10 19:02:14,199 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=70.5 pTM=0.559 ipTM=0.26 tol=3.5 2024-07-10 19:02:44,429 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=70.7 pTM=0.558 ipTM=0.259 tol=2.68 2024-07-10 19:03:14,640 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=70.4 pTM=0.562 ipTM=0.273 tol=3.11 2024-07-10 19:03:44,844 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=70.7 pTM=0.562 ipTM=0.273 tol=2.8 2024-07-10 19:04:15,065 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=70.1 pTM=0.559 ipTM=0.266 tol=2.58 2024-07-10 19:04:45,276 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=70.5 pTM=0.559 ipTM=0.264 tol=3.51 2024-07-10 19:05:15,523 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=70.4 pTM=0.56 ipTM=0.265 tol=1.95 2024-07-10 19:05:45,737 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=70.4 pTM=0.557 ipTM=0.262 tol=2.42 2024-07-10 19:05:45,738 alphafold2_multimer_v3_model_5_seed_000 took 936.8s (30 recycles) 2024-07-10 19:05:46,526 reranking models by 'multimer' metric 2024-07-10 19:05:47,955 Warning: importing 'simtk.openmm' is deprecated. Import 'openmm' instead. 2024-07-10 19:07:11,112 Relaxation took 84.6s 2024-07-10 19:07:11,112 rank_001_alphafold2_multimer_v3_model_2_seed_000 pLDDT=74.2 pTM=0.633 ipTM=0.504 2024-07-10 19:08:47,783 Relaxation took 96.7s 2024-07-10 19:08:47,784 rank_002_alphafold2_multimer_v3_model_1_seed_000 pLDDT=71.9 pTM=0.559 ipTM=0.282 2024-07-10 19:10:08,574 Relaxation took 80.8s 2024-07-10 19:10:08,574 rank_003_alphafold2_multimer_v3_model_4_seed_000 pLDDT=69.7 pTM=0.558 ipTM=0.275 2024-07-10 19:10:44,850 Relaxation took 36.3s 2024-07-10 19:10:44,850 rank_004_alphafold2_multimer_v3_model_5_seed_000 pLDDT=70.4 pTM=0.557 ipTM=0.262 2024-07-10 19:12:01,567 Relaxation took 76.7s 2024-07-10 19:12:01,567 rank_005_alphafold2_multimer_v3_model_3_seed_000 pLDDT=71.4 pTM=0.552 ipTM=0.254 2024-07-10 19:12:03,899 Done