2024-07-10 17:50:32,272 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3) 2024-07-10 17:50:32,599 Running on GPU 2024-07-10 17:50:36,816 Found 6 citations for tools or databases 2024-07-10 17:50:36,817 Query 1/1: HYAS3_ESAM (length 943) 2024-07-10 17:50:37,288 Sleeping for 9s. Reason: PENDING 2024-07-10 17:50:46,710 Sleeping for 7s. Reason: RUNNING 2024-07-10 17:50:54,147 Sleeping for 8s. Reason: RUNNING 2024-07-10 17:51:02,787 Sleeping for 9s. Reason: RUNNING 2024-07-10 17:51:12,208 Sleeping for 7s. Reason: RUNNING 2024-07-10 17:51:19,619 Sleeping for 6s. Reason: RUNNING 2024-07-10 17:51:26,036 Sleeping for 8s. Reason: RUNNING 2024-07-10 17:51:34,464 Sleeping for 10s. Reason: RUNNING 2024-07-10 17:51:45,055 Sleeping for 5s. Reason: RUNNING 2024-07-10 17:51:50,489 Sleeping for 10s. Reason: RUNNING 2024-07-10 17:52:00,921 Sleeping for 9s. Reason: RUNNING 2024-07-10 17:52:10,343 Sleeping for 6s. Reason: RUNNING 2024-07-10 17:52:16,944 Sleeping for 5s. Reason: RUNNING 2024-07-10 17:52:22,384 Sleeping for 7s. Reason: RUNNING 2024-07-10 17:52:29,808 Sleeping for 9s. Reason: RUNNING 2024-07-10 17:52:39,249 Sleeping for 10s. Reason: RUNNING 2024-07-10 17:52:49,676 Sleeping for 9s. Reason: RUNNING 2024-07-10 17:52:59,101 Sleeping for 10s. Reason: RUNNING 2024-07-10 17:53:09,565 Sleeping for 8s. Reason: RUNNING 2024-07-10 17:53:17,991 Sleeping for 8s. Reason: RUNNING 2024-07-10 17:53:26,400 Sleeping for 9s. Reason: RUNNING 2024-07-10 17:53:35,811 Sleeping for 10s. Reason: RUNNING 2024-07-10 17:53:46,228 Sleeping for 7s. Reason: RUNNING 2024-07-10 17:53:53,961 Sleeping for 5s. Reason: RUNNING 2024-07-10 17:53:59,376 Sleeping for 8s. Reason: RUNNING 2024-07-10 17:54:07,806 Sleeping for 5s. Reason: RUNNING 2024-07-10 17:54:13,416 Sleeping for 6s. Reason: RUNNING 2024-07-10 17:54:19,847 Sleeping for 8s. Reason: RUNNING 2024-07-10 17:54:28,277 Sleeping for 10s. Reason: RUNNING 2024-07-10 17:54:38,701 Sleeping for 5s. Reason: RUNNING 2024-07-10 17:54:44,115 Sleeping for 10s. Reason: RUNNING 2024-07-10 17:54:54,543 Sleeping for 5s. Reason: RUNNING 2024-07-10 17:54:59,989 Sleeping for 8s. Reason: RUNNING 2024-07-10 17:55:11,152 Sleeping for 5s. Reason: PENDING 2024-07-10 17:55:16,570 Sleeping for 6s. Reason: RUNNING 2024-07-10 17:55:23,209 Sleeping for 9s. Reason: RUNNING 2024-07-10 17:55:32,644 Sleeping for 10s. Reason: RUNNING 2024-07-10 17:55:43,083 Sleeping for 8s. Reason: RUNNING 2024-07-10 17:55:51,516 Sleeping for 8s. Reason: RUNNING 2024-07-10 17:55:59,941 Sleeping for 6s. Reason: RUNNING 2024-07-10 17:56:06,356 Sleeping for 8s. Reason: RUNNING 2024-07-10 17:56:14,773 Sleeping for 9s. Reason: RUNNING 2024-07-10 17:56:24,193 Sleeping for 9s. Reason: RUNNING 2024-07-10 17:56:33,623 Sleeping for 9s. Reason: RUNNING 2024-07-10 17:56:45,002 Setting max_seq=508, max_extra_seq=2048 2024-07-10 17:59:42,678 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=72 pTM=0.639 ipTM=0.26 2024-07-10 18:00:02,605 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=73.8 pTM=0.634 ipTM=0.286 tol=5.39 2024-07-10 18:00:22,583 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=73.9 pTM=0.628 ipTM=0.269 tol=2.37 2024-07-10 18:00:42,640 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=74.1 pTM=0.624 ipTM=0.292 tol=2.03 2024-07-10 18:01:02,737 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=74 pTM=0.621 ipTM=0.302 tol=1.81 2024-07-10 18:01:22,902 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=74.4 pTM=0.623 ipTM=0.304 tol=1.36 2024-07-10 18:01:43,061 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=74.2 pTM=0.619 ipTM=0.3 tol=1.32 2024-07-10 18:02:03,246 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=74.2 pTM=0.618 ipTM=0.247 tol=1.06 2024-07-10 18:02:23,442 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=74.2 pTM=0.619 ipTM=0.302 tol=1.09 2024-07-10 18:02:43,649 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=74.3 pTM=0.617 ipTM=0.264 tol=2.16 2024-07-10 18:03:03,862 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=74.2 pTM=0.617 ipTM=0.307 tol=2.21 2024-07-10 18:03:24,084 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=74.1 pTM=0.617 ipTM=0.255 tol=3.04 2024-07-10 18:03:44,294 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=74.1 pTM=0.617 ipTM=0.309 tol=2.84 2024-07-10 18:04:04,517 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=74.2 pTM=0.616 ipTM=0.267 tol=1.19 2024-07-10 18:04:24,735 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=74.1 pTM=0.62 ipTM=0.285 tol=1.33 2024-07-10 18:04:44,954 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=74.1 pTM=0.617 ipTM=0.254 tol=1.76 2024-07-10 18:05:05,181 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=74.1 pTM=0.621 ipTM=0.307 tol=1.07 2024-07-10 18:05:25,404 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=74.2 pTM=0.618 ipTM=0.246 tol=0.804 2024-07-10 18:05:45,612 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=73.9 pTM=0.617 ipTM=0.26 tol=2.53 2024-07-10 18:06:05,832 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=74.1 pTM=0.618 ipTM=0.234 tol=3.71 2024-07-10 18:06:26,046 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=73.9 pTM=0.618 ipTM=0.329 tol=4.07 2024-07-10 18:06:46,262 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=74.1 pTM=0.619 ipTM=0.336 tol=1.01 2024-07-10 18:07:06,478 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=74.1 pTM=0.622 ipTM=0.34 tol=2.96 2024-07-10 18:07:26,704 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=73.9 pTM=0.617 ipTM=0.249 tol=2.83 2024-07-10 18:07:46,928 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=74.1 pTM=0.619 ipTM=0.28 tol=1.13 2024-07-10 18:08:07,152 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=74 pTM=0.617 ipTM=0.238 tol=3.79 2024-07-10 18:08:27,393 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=73.9 pTM=0.616 ipTM=0.261 tol=3.42 2024-07-10 18:08:47,618 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=73.8 pTM=0.612 ipTM=0.224 tol=1.08 2024-07-10 18:09:07,832 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=73.6 pTM=0.613 ipTM=0.26 tol=1.28 2024-07-10 18:09:28,071 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=73.9 pTM=0.615 ipTM=0.242 tol=2.05 2024-07-10 18:09:48,298 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=73.7 pTM=0.614 ipTM=0.256 tol=1.58 2024-07-10 18:09:48,299 alphafold2_multimer_v3_model_1_seed_000 took 777.1s (30 recycles) 2024-07-10 18:10:09,171 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=73.1 pTM=0.617 ipTM=0.208 2024-07-10 18:10:29,488 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=74.5 pTM=0.624 ipTM=0.216 tol=8.45 2024-07-10 18:10:49,821 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=74.8 pTM=0.615 ipTM=0.196 tol=2.16 2024-07-10 18:11:10,166 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=75.1 pTM=0.616 ipTM=0.195 tol=2.13 2024-07-10 18:11:30,509 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=74.9 pTM=0.613 ipTM=0.188 tol=1.8 2024-07-10 18:11:50,844 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=75.1 pTM=0.615 ipTM=0.194 tol=1.73 2024-07-10 18:12:11,134 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=75.1 pTM=0.615 ipTM=0.196 tol=1.45 2024-07-10 18:12:31,430 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=75.2 pTM=0.615 ipTM=0.198 tol=0.811 2024-07-10 18:12:51,718 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=75.2 pTM=0.613 ipTM=0.193 tol=0.676 2024-07-10 18:13:12,019 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=75.3 pTM=0.612 ipTM=0.191 tol=0.844 2024-07-10 18:13:32,322 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=75.3 pTM=0.612 ipTM=0.193 tol=0.913 2024-07-10 18:13:52,631 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=75.2 pTM=0.612 ipTM=0.191 tol=0.664 2024-07-10 18:14:12,923 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=75 pTM=0.61 ipTM=0.189 tol=0.576 2024-07-10 18:14:33,227 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=75.1 pTM=0.611 ipTM=0.193 tol=0.936 2024-07-10 18:14:53,518 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=74.9 pTM=0.611 ipTM=0.194 tol=0.829 2024-07-10 18:15:13,836 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=75.1 pTM=0.615 ipTM=0.199 tol=0.706 2024-07-10 18:15:34,149 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=75.1 pTM=0.612 ipTM=0.194 tol=0.921 2024-07-10 18:15:54,463 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=75.1 pTM=0.612 ipTM=0.191 tol=1.23 2024-07-10 18:16:14,768 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=75.1 pTM=0.612 ipTM=0.192 tol=0.695 2024-07-10 18:16:35,091 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=75.1 pTM=0.613 ipTM=0.194 tol=0.761 2024-07-10 18:16:55,403 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=75 pTM=0.611 ipTM=0.19 tol=0.994 2024-07-10 18:17:15,724 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=75.1 pTM=0.611 ipTM=0.189 tol=0.758 2024-07-10 18:17:36,043 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=75.1 pTM=0.611 ipTM=0.19 tol=0.842 2024-07-10 18:17:56,362 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=75.1 pTM=0.612 ipTM=0.195 tol=0.594 2024-07-10 18:18:16,673 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=75.1 pTM=0.61 ipTM=0.186 tol=0.837 2024-07-10 18:18:36,985 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=75.2 pTM=0.611 ipTM=0.19 tol=0.91 2024-07-10 18:18:57,296 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=75.1 pTM=0.609 ipTM=0.186 tol=1.1 2024-07-10 18:19:17,610 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=75.1 pTM=0.61 ipTM=0.186 tol=1.1 2024-07-10 18:19:37,910 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=75 pTM=0.608 ipTM=0.186 tol=0.792 2024-07-10 18:19:58,203 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=75.3 pTM=0.613 ipTM=0.194 tol=0.894 2024-07-10 18:20:18,479 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=75.1 pTM=0.608 ipTM=0.185 tol=0.79 2024-07-10 18:20:18,480 alphafold2_multimer_v3_model_2_seed_000 took 629.6s (30 recycles) 2024-07-10 18:20:39,326 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=72.3 pTM=0.623 ipTM=0.214 2024-07-10 18:20:59,487 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=72.6 pTM=0.606 ipTM=0.193 tol=10.1 2024-07-10 18:21:19,694 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=72.7 pTM=0.599 ipTM=0.178 tol=4.94 2024-07-10 18:21:39,904 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=72.5 pTM=0.596 ipTM=0.18 tol=3.21 2024-07-10 18:22:00,112 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=72.3 pTM=0.596 ipTM=0.176 tol=2.14 2024-07-10 18:22:20,328 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=72.2 pTM=0.597 ipTM=0.188 tol=1.49 2024-07-10 18:22:40,548 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=72.4 pTM=0.597 ipTM=0.182 tol=2.76 2024-07-10 18:23:00,762 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=72.4 pTM=0.598 ipTM=0.182 tol=2.05 2024-07-10 18:23:20,983 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=72.4 pTM=0.598 ipTM=0.182 tol=1.99 2024-07-10 18:23:41,200 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=72.2 pTM=0.594 ipTM=0.172 tol=2.1 2024-07-10 18:24:01,443 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=72.6 pTM=0.598 ipTM=0.178 tol=1.53 2024-07-10 18:24:21,671 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=72.2 pTM=0.597 ipTM=0.177 tol=1.78 2024-07-10 18:24:41,884 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=71.9 pTM=0.594 ipTM=0.176 tol=1.34 2024-07-10 18:25:02,102 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=71.9 pTM=0.595 ipTM=0.175 tol=1.38 2024-07-10 18:25:22,313 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=72 pTM=0.597 ipTM=0.179 tol=2.4 2024-07-10 18:25:42,486 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=72 pTM=0.598 ipTM=0.183 tol=1.42 2024-07-10 18:26:02,693 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=72.2 pTM=0.597 ipTM=0.179 tol=1.77 2024-07-10 18:26:22,885 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=72.3 pTM=0.597 ipTM=0.178 tol=1.43 2024-07-10 18:26:43,060 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=72.2 pTM=0.596 ipTM=0.177 tol=1.2 2024-07-10 18:27:03,235 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=72.1 pTM=0.597 ipTM=0.177 tol=0.961 2024-07-10 18:27:23,417 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=72.1 pTM=0.594 ipTM=0.172 tol=1.03 2024-07-10 18:27:43,595 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=71.8 pTM=0.593 ipTM=0.17 tol=1.69 2024-07-10 18:28:03,789 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=72.2 pTM=0.596 ipTM=0.175 tol=1.69 2024-07-10 18:28:23,976 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=71.9 pTM=0.595 ipTM=0.179 tol=1.38 2024-07-10 18:28:44,151 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=72 pTM=0.595 ipTM=0.177 tol=0.784 2024-07-10 18:29:04,333 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=71.9 pTM=0.594 ipTM=0.173 tol=1.32 2024-07-10 18:29:24,539 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=72.1 pTM=0.594 ipTM=0.173 tol=1.55 2024-07-10 18:29:44,730 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=71.8 pTM=0.594 ipTM=0.203 tol=1.71 2024-07-10 18:30:04,925 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=71.7 pTM=0.592 ipTM=0.177 tol=1.54 2024-07-10 18:30:25,126 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=71.9 pTM=0.595 ipTM=0.183 tol=0.994 2024-07-10 18:30:45,318 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=71.7 pTM=0.592 ipTM=0.186 tol=1.08 2024-07-10 18:30:45,319 alphafold2_multimer_v3_model_3_seed_000 took 626.3s (30 recycles) 2024-07-10 18:31:06,029 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=71.9 pTM=0.621 ipTM=0.247 2024-07-10 18:31:26,204 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=73.7 pTM=0.621 ipTM=0.594 tol=15.7 2024-07-10 18:31:46,345 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=73.5 pTM=0.612 ipTM=0.389 tol=6.89 2024-07-10 18:32:06,507 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=73.4 pTM=0.612 ipTM=0.464 tol=5.43 2024-07-10 18:32:26,658 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=73.1 pTM=0.606 ipTM=0.381 tol=4.04 2024-07-10 18:32:46,829 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=73 pTM=0.606 ipTM=0.342 tol=3.1 2024-07-10 18:33:06,991 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=73.4 pTM=0.609 ipTM=0.395 tol=2.82 2024-07-10 18:33:27,153 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=73 pTM=0.606 ipTM=0.34 tol=1.69 2024-07-10 18:33:47,322 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=73.1 pTM=0.605 ipTM=0.332 tol=1.96 2024-07-10 18:34:07,482 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=72.8 pTM=0.605 ipTM=0.324 tol=2.33 2024-07-10 18:34:27,663 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=73.1 pTM=0.604 ipTM=0.294 tol=1.33 2024-07-10 18:34:47,844 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=72.8 pTM=0.604 ipTM=0.26 tol=1.02 2024-07-10 18:35:08,012 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=72.6 pTM=0.602 ipTM=0.26 tol=1.04 2024-07-10 18:35:28,190 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=72.5 pTM=0.601 ipTM=0.255 tol=1.49 2024-07-10 18:35:48,391 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=72.8 pTM=0.603 ipTM=0.242 tol=1.11 2024-07-10 18:36:08,591 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=72.6 pTM=0.604 ipTM=0.256 tol=1.48 2024-07-10 18:36:28,786 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=72.9 pTM=0.603 ipTM=0.25 tol=1.43 2024-07-10 18:36:48,974 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=72.9 pTM=0.601 ipTM=0.217 tol=1.99 2024-07-10 18:37:09,185 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=73 pTM=0.602 ipTM=0.234 tol=1.45 2024-07-10 18:37:29,400 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=72.9 pTM=0.603 ipTM=0.226 tol=1.16 2024-07-10 18:37:49,606 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=72.9 pTM=0.6 ipTM=0.214 tol=2.99 2024-07-10 18:38:09,816 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=72.9 pTM=0.601 ipTM=0.228 tol=2.58 2024-07-10 18:38:30,038 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=73 pTM=0.603 ipTM=0.237 tol=2.01 2024-07-10 18:38:50,266 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=72.9 pTM=0.602 ipTM=0.246 tol=0.922 2024-07-10 18:39:10,492 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=72.9 pTM=0.601 ipTM=0.21 tol=1.57 2024-07-10 18:39:30,715 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=72.8 pTM=0.597 ipTM=0.175 tol=5.93 2024-07-10 18:39:50,943 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=72.9 pTM=0.597 ipTM=0.177 tol=6.62 2024-07-10 18:40:11,149 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=72.8 pTM=0.593 ipTM=0.177 tol=3.9 2024-07-10 18:40:31,351 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=72.7 pTM=0.594 ipTM=0.177 tol=5.15 2024-07-10 18:40:51,566 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=72.9 pTM=0.593 ipTM=0.182 tol=3.37 2024-07-10 18:41:11,766 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=72.6 pTM=0.59 ipTM=0.169 tol=3.46 2024-07-10 18:41:11,768 alphafold2_multimer_v3_model_4_seed_000 took 625.9s (30 recycles) 2024-07-10 18:41:32,498 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=71 pTM=0.613 ipTM=0.206 2024-07-10 18:41:52,673 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=71.9 pTM=0.599 ipTM=0.184 tol=6.39 2024-07-10 18:42:12,876 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=72.3 pTM=0.593 ipTM=0.18 tol=6.55 2024-07-10 18:42:33,054 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=72.4 pTM=0.592 ipTM=0.176 tol=2.35 2024-07-10 18:42:53,244 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=72.5 pTM=0.589 ipTM=0.168 tol=1.62 2024-07-10 18:43:13,450 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=72.6 pTM=0.59 ipTM=0.17 tol=2.18 2024-07-10 18:43:33,652 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=72.7 pTM=0.589 ipTM=0.182 tol=2.35 2024-07-10 18:43:53,826 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=72.6 pTM=0.589 ipTM=0.177 tol=1.68 2024-07-10 18:44:14,011 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=72.6 pTM=0.589 ipTM=0.191 tol=3.59 2024-07-10 18:44:34,190 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=72.6 pTM=0.589 ipTM=0.188 tol=4.54 2024-07-10 18:44:54,372 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=72.8 pTM=0.589 ipTM=0.193 tol=2.43 2024-07-10 18:45:14,550 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=72.7 pTM=0.59 ipTM=0.193 tol=1.54 2024-07-10 18:45:34,727 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=72.4 pTM=0.587 ipTM=0.179 tol=1.91 2024-07-10 18:45:54,909 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=72.3 pTM=0.588 ipTM=0.178 tol=2.53 2024-07-10 18:46:15,100 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=72.6 pTM=0.589 ipTM=0.17 tol=3.12 2024-07-10 18:46:35,292 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=72.4 pTM=0.589 ipTM=0.169 tol=3.5 2024-07-10 18:46:55,489 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=72.8 pTM=0.594 ipTM=0.179 tol=4.53 2024-07-10 18:47:15,668 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=72.5 pTM=0.59 ipTM=0.179 tol=4.8 2024-07-10 18:47:35,854 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=72.6 pTM=0.59 ipTM=0.174 tol=4.3 2024-07-10 18:47:56,057 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=72.7 pTM=0.588 ipTM=0.166 tol=2.95 2024-07-10 18:48:16,241 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=72.6 pTM=0.587 ipTM=0.16 tol=2.77 2024-07-10 18:48:36,439 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=72.8 pTM=0.586 ipTM=0.158 tol=2.11 2024-07-10 18:48:56,650 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=72.9 pTM=0.586 ipTM=0.159 tol=1.62 2024-07-10 18:49:16,849 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=72.7 pTM=0.586 ipTM=0.161 tol=2.06 2024-07-10 18:49:37,054 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=72.9 pTM=0.586 ipTM=0.16 tol=1.8 2024-07-10 18:49:57,249 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=72.8 pTM=0.584 ipTM=0.159 tol=2.15 2024-07-10 18:50:17,464 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=72.9 pTM=0.584 ipTM=0.157 tol=1.95 2024-07-10 18:50:37,650 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=72.7 pTM=0.583 ipTM=0.158 tol=2.24 2024-07-10 18:50:57,844 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=72.8 pTM=0.582 ipTM=0.159 tol=3.24 2024-07-10 18:51:18,054 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=72.8 pTM=0.583 ipTM=0.159 tol=2.9 2024-07-10 18:51:38,248 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=72.6 pTM=0.581 ipTM=0.162 tol=4.06 2024-07-10 18:51:38,249 alphafold2_multimer_v3_model_5_seed_000 took 625.9s (30 recycles) 2024-07-10 18:51:38,798 reranking models by 'multimer' metric 2024-07-10 18:51:42,270 Warning: importing 'simtk.openmm' is deprecated. Import 'openmm' instead. 2024-07-10 18:53:20,754 Relaxation took 102.0s 2024-07-10 18:53:20,755 rank_001_alphafold2_multimer_v3_model_1_seed_000 pLDDT=73.7 pTM=0.614 ipTM=0.256 2024-07-10 18:54:27,037 Relaxation took 66.3s 2024-07-10 18:54:27,037 rank_002_alphafold2_multimer_v3_model_2_seed_000 pLDDT=75.1 pTM=0.608 ipTM=0.185 2024-07-10 18:55:15,773 Relaxation took 48.7s 2024-07-10 18:55:15,773 rank_003_alphafold2_multimer_v3_model_3_seed_000 pLDDT=71.7 pTM=0.592 ipTM=0.186 2024-07-10 18:56:29,313 Relaxation took 73.5s 2024-07-10 18:56:29,313 rank_004_alphafold2_multimer_v3_model_4_seed_000 pLDDT=72.6 pTM=0.59 ipTM=0.169 2024-07-10 18:57:28,123 Relaxation took 58.8s 2024-07-10 18:57:28,123 rank_005_alphafold2_multimer_v3_model_5_seed_000 pLDDT=72.6 pTM=0.581 ipTM=0.162 2024-07-10 18:57:29,902 Done