2024-07-10 19:10:54,148 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3)
2024-07-10 19:10:54,477 Running on GPU
2024-07-10 19:10:58,307 Found 6 citations for tools or databases
2024-07-10 19:10:58,307 Query 1/1: IKKE_OR6N1 (length 1028)
2024-07-10 19:10:59,214 Sleeping for 7s. Reason: PENDING
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2024-07-10 19:17:23,136 Setting max_seq=508, max_extra_seq=2048
2024-07-10 19:19:52,300 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=79.9 pTM=0.627 ipTM=0.148
2024-07-10 19:20:16,017 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=80.1 pTM=0.625 ipTM=0.149 tol=5.06
2024-07-10 19:20:39,797 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=80.4 pTM=0.625 ipTM=0.153 tol=2.72
2024-07-10 19:21:03,604 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=80.8 pTM=0.63 ipTM=0.166 tol=1.95
2024-07-10 19:21:27,413 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=80.4 pTM=0.641 ipTM=0.226 tol=5.79
2024-07-10 19:21:51,237 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=82.2 pTM=0.701 ipTM=0.468 tol=3.08
2024-07-10 19:22:15,048 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=82.2 pTM=0.705 ipTM=0.485 tol=0.604
2024-07-10 19:22:38,885 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=81.5 pTM=0.676 ipTM=0.374 tol=0.751
2024-07-10 19:23:02,694 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=81.2 pTM=0.661 ipTM=0.327 tol=0.672
2024-07-10 19:23:26,495 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=81.7 pTM=0.697 ipTM=0.456 tol=1.43
2024-07-10 19:23:50,316 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=81.5 pTM=0.684 ipTM=0.409 tol=0.667
2024-07-10 19:24:14,136 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=81.1 pTM=0.67 ipTM=0.378 tol=0.689
2024-07-10 19:24:37,931 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=81.5 pTM=0.687 ipTM=0.423 tol=0.956
2024-07-10 19:25:01,749 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=81.2 pTM=0.684 ipTM=0.417 tol=0.393
2024-07-10 19:25:01,750 alphafold2_multimer_v3_model_1_seed_000 took 454.9s (13 recycles)
2024-07-10 19:25:26,311 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=79.5 pTM=0.62 ipTM=0.149
2024-07-10 19:25:50,272 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=80.8 pTM=0.627 ipTM=0.159 tol=5.73
2024-07-10 19:26:14,203 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=81.2 pTM=0.627 ipTM=0.169 tol=4.13
2024-07-10 19:26:38,138 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=81.4 pTM=0.628 ipTM=0.171 tol=2.42
2024-07-10 19:27:02,068 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=81.3 pTM=0.628 ipTM=0.172 tol=2.84
2024-07-10 19:27:25,989 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=81.1 pTM=0.625 ipTM=0.165 tol=0.819
2024-07-10 19:27:49,909 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=81.1 pTM=0.626 ipTM=0.169 tol=1.14
2024-07-10 19:28:13,838 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=81.1 pTM=0.626 ipTM=0.169 tol=0.744
2024-07-10 19:28:37,769 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=81 pTM=0.625 ipTM=0.163 tol=1.09
2024-07-10 19:29:01,700 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=80.6 pTM=0.627 ipTM=0.176 tol=1.9
2024-07-10 19:29:25,626 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=80.8 pTM=0.628 ipTM=0.175 tol=1.24
2024-07-10 19:29:49,547 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=80.8 pTM=0.627 ipTM=0.174 tol=0.883
2024-07-10 19:30:13,475 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=80.6 pTM=0.629 ipTM=0.183 tol=0.908
2024-07-10 19:30:37,390 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=80.6 pTM=0.627 ipTM=0.176 tol=0.847
2024-07-10 19:31:01,333 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=80.6 pTM=0.631 ipTM=0.182 tol=1.13
2024-07-10 19:31:25,276 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=80.6 pTM=0.627 ipTM=0.174 tol=0.726
2024-07-10 19:31:49,204 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=80.6 pTM=0.631 ipTM=0.182 tol=1.16
2024-07-10 19:32:13,136 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=80.4 pTM=0.628 ipTM=0.173 tol=1.31
2024-07-10 19:32:37,057 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=80.5 pTM=0.632 ipTM=0.183 tol=1.38
2024-07-10 19:33:00,968 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=79.9 pTM=0.627 ipTM=0.183 tol=2.67
2024-07-10 19:33:24,882 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=80.4 pTM=0.635 ipTM=0.201 tol=3.94
2024-07-10 19:33:48,769 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=80.4 pTM=0.63 ipTM=0.195 tol=1.57
2024-07-10 19:34:12,657 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=80.2 pTM=0.633 ipTM=0.195 tol=0.634
2024-07-10 19:34:36,538 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=80.4 pTM=0.636 ipTM=0.21 tol=0.638
2024-07-10 19:35:00,438 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=80.4 pTM=0.636 ipTM=0.217 tol=1.24
2024-07-10 19:35:24,321 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=80.6 pTM=0.642 ipTM=0.236 tol=0.935
2024-07-10 19:35:48,203 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=80.6 pTM=0.638 ipTM=0.24 tol=0.792
2024-07-10 19:36:12,100 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=80.4 pTM=0.633 ipTM=0.265 tol=0.612
2024-07-10 19:36:35,998 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=80.1 pTM=0.631 ipTM=0.235 tol=0.843
2024-07-10 19:36:59,886 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=80.3 pTM=0.63 ipTM=0.236 tol=0.902
2024-07-10 19:37:23,779 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=80.1 pTM=0.628 ipTM=0.253 tol=0.744
2024-07-10 19:37:23,780 alphafold2_multimer_v3_model_2_seed_000 took 741.4s (30 recycles)
2024-07-10 19:37:48,322 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=79.2 pTM=0.615 ipTM=0.141
2024-07-10 19:38:12,182 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=78.8 pTM=0.617 ipTM=0.156 tol=4.55
2024-07-10 19:38:36,022 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=78.7 pTM=0.613 ipTM=0.165 tol=1.21
2024-07-10 19:38:59,878 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=78.7 pTM=0.606 ipTM=0.153 tol=1.02
2024-07-10 19:39:23,724 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=78.6 pTM=0.608 ipTM=0.163 tol=1.79
2024-07-10 19:39:47,587 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=78.6 pTM=0.604 ipTM=0.152 tol=3.14
2024-07-10 19:40:11,441 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=78.2 pTM=0.606 ipTM=0.154 tol=4.28
2024-07-10 19:40:35,311 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=78.6 pTM=0.606 ipTM=0.151 tol=5.37
2024-07-10 19:40:59,196 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=78.4 pTM=0.605 ipTM=0.152 tol=0.966
2024-07-10 19:41:23,074 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=78.2 pTM=0.605 ipTM=0.153 tol=1.15
2024-07-10 19:41:46,945 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=78.6 pTM=0.609 ipTM=0.154 tol=2
2024-07-10 19:42:10,784 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=78.6 pTM=0.607 ipTM=0.159 tol=2.62
2024-07-10 19:42:34,613 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=78.4 pTM=0.608 ipTM=0.166 tol=3.02
2024-07-10 19:42:58,452 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=78.6 pTM=0.612 ipTM=0.17 tol=0.97
2024-07-10 19:43:22,288 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=78.8 pTM=0.615 ipTM=0.175 tol=0.824
2024-07-10 19:43:46,122 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=78.4 pTM=0.611 ipTM=0.168 tol=1.07
2024-07-10 19:44:09,954 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=78.5 pTM=0.612 ipTM=0.174 tol=1.05
2024-07-10 19:44:33,781 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=78.4 pTM=0.613 ipTM=0.176 tol=0.633
2024-07-10 19:44:57,623 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=78.5 pTM=0.611 ipTM=0.17 tol=1.37
2024-07-10 19:45:21,472 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=78.6 pTM=0.617 ipTM=0.184 tol=2.12
2024-07-10 19:45:45,310 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=78.4 pTM=0.614 ipTM=0.182 tol=0.778
2024-07-10 19:46:09,144 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=78.2 pTM=0.611 ipTM=0.181 tol=0.422
2024-07-10 19:46:09,145 alphafold2_multimer_v3_model_3_seed_000 took 524.7s (21 recycles)
2024-07-10 19:46:33,715 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=78.9 pTM=0.611 ipTM=0.132
2024-07-10 19:46:57,622 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=79.6 pTM=0.612 ipTM=0.149 tol=2.72
2024-07-10 19:47:21,538 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=80.2 pTM=0.609 ipTM=0.144 tol=4.08
2024-07-10 19:47:45,446 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=80.4 pTM=0.614 ipTM=0.154 tol=7.5
2024-07-10 19:48:09,352 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=80.1 pTM=0.613 ipTM=0.15 tol=7.06
2024-07-10 19:48:33,236 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=79.9 pTM=0.625 ipTM=0.179 tol=6.36
2024-07-10 19:48:57,130 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=80.4 pTM=0.625 ipTM=0.174 tol=0.957
2024-07-10 19:49:21,018 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=80.4 pTM=0.629 ipTM=0.183 tol=1.38
2024-07-10 19:49:44,915 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=80.8 pTM=0.63 ipTM=0.18 tol=1.07
2024-07-10 19:50:08,774 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=79.9 pTM=0.625 ipTM=0.177 tol=1.28
2024-07-10 19:50:32,654 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=80.4 pTM=0.628 ipTM=0.183 tol=1.24
2024-07-10 19:50:56,534 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=80.4 pTM=0.629 ipTM=0.184 tol=2.06
2024-07-10 19:51:20,415 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=80.4 pTM=0.626 ipTM=0.186 tol=3.73
2024-07-10 19:51:44,299 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=80.4 pTM=0.63 ipTM=0.197 tol=3.27
2024-07-10 19:52:08,167 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=80.2 pTM=0.626 ipTM=0.179 tol=2.88
2024-07-10 19:52:32,010 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=80.1 pTM=0.629 ipTM=0.191 tol=2.12
2024-07-10 19:52:55,826 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=80.4 pTM=0.637 ipTM=0.222 tol=3.8
2024-07-10 19:53:19,659 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=81.3 pTM=0.664 ipTM=0.331 tol=1.42
2024-07-10 19:53:43,491 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=81.2 pTM=0.657 ipTM=0.299 tol=0.883
2024-07-10 19:54:07,320 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=80.1 pTM=0.652 ipTM=0.277 tol=3.36
2024-07-10 19:54:31,138 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=80.6 pTM=0.658 ipTM=0.31 tol=2.01
2024-07-10 19:54:54,947 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=80.6 pTM=0.661 ipTM=0.33 tol=0.91
2024-07-10 19:55:18,787 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=80.7 pTM=0.656 ipTM=0.295 tol=0.587
2024-07-10 19:55:42,612 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=80.4 pTM=0.657 ipTM=0.304 tol=0.407
2024-07-10 19:55:42,613 alphafold2_multimer_v3_model_4_seed_000 took 572.8s (23 recycles)
2024-07-10 19:56:07,173 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=78.3 pTM=0.614 ipTM=0.146
2024-07-10 19:56:31,084 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=78.4 pTM=0.617 ipTM=0.159 tol=2.52
2024-07-10 19:56:55,001 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=78.9 pTM=0.613 ipTM=0.162 tol=1.71
2024-07-10 19:57:18,919 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=79.5 pTM=0.616 ipTM=0.159 tol=1.03
2024-07-10 19:57:42,843 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=79.4 pTM=0.615 ipTM=0.16 tol=0.893
2024-07-10 19:58:06,760 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=79.3 pTM=0.616 ipTM=0.159 tol=0.88
2024-07-10 19:58:30,674 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=79.4 pTM=0.615 ipTM=0.155 tol=0.746
2024-07-10 19:58:54,608 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=79.1 pTM=0.615 ipTM=0.157 tol=0.588
2024-07-10 19:59:18,526 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=79.2 pTM=0.616 ipTM=0.153 tol=0.544
2024-07-10 19:59:42,419 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=78.6 pTM=0.613 ipTM=0.155 tol=0.667
2024-07-10 20:00:06,340 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=78.9 pTM=0.614 ipTM=0.153 tol=0.854
2024-07-10 20:00:30,258 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=78.7 pTM=0.612 ipTM=0.153 tol=0.646
2024-07-10 20:00:54,174 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=78.8 pTM=0.612 ipTM=0.152 tol=0.512
2024-07-10 20:01:18,073 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=78.6 pTM=0.613 ipTM=0.156 tol=0.981
2024-07-10 20:01:41,989 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=78.7 pTM=0.613 ipTM=0.153 tol=0.552
2024-07-10 20:02:05,893 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=78.6 pTM=0.612 ipTM=0.153 tol=0.295
2024-07-10 20:02:05,894 alphafold2_multimer_v3_model_5_seed_000 took 382.6s (15 recycles)
2024-07-10 20:02:06,547 reranking models by 'multimer' metric
2024-07-10 20:02:10,386 Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
2024-07-10 20:02:47,654 Relaxation took 41.1s
2024-07-10 20:02:47,655 rank_001_alphafold2_multimer_v3_model_1_seed_000 pLDDT=81.2 pTM=0.684 ipTM=0.417
2024-07-10 20:03:52,310 Relaxation took 64.7s
2024-07-10 20:03:52,310 rank_002_alphafold2_multimer_v3_model_4_seed_000 pLDDT=80.4 pTM=0.657 ipTM=0.304
2024-07-10 20:04:51,538 Relaxation took 59.2s
2024-07-10 20:04:51,538 rank_003_alphafold2_multimer_v3_model_2_seed_000 pLDDT=80.1 pTM=0.628 ipTM=0.253
2024-07-10 20:06:01,665 Relaxation took 70.1s
2024-07-10 20:06:01,665 rank_004_alphafold2_multimer_v3_model_3_seed_000 pLDDT=78.2 pTM=0.611 ipTM=0.181
2024-07-10 20:06:44,482 Relaxation took 42.8s
2024-07-10 20:06:44,483 rank_005_alphafold2_multimer_v3_model_5_seed_000 pLDDT=78.6 pTM=0.612 ipTM=0.153
2024-07-10 20:06:46,380 Done