2024-07-10 21:14:25,159 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3)
2024-07-10 21:14:25,477 Running on GPU
2024-07-10 21:14:29,296 Found 6 citations for tools or databases
2024-07-10 21:14:29,296 Query 1/1: IZUM3_KLH23 (length 797)
2024-07-10 21:14:29,789 Sleeping for 9s. Reason: PENDING
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2024-07-10 21:16:57,653 Sleeping for 5s. Reason: PENDING
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2024-07-10 21:18:11,025 Setting max_seq=508, max_extra_seq=1841
2024-07-10 21:21:17,000 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=77.1 pTM=0.669 ipTM=0.152
2024-07-10 21:21:30,004 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=80.7 pTM=0.708 ipTM=0.248 tol=11.4
2024-07-10 21:21:43,037 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=82.6 pTM=0.748 ipTM=0.382 tol=2.56
2024-07-10 21:21:56,116 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=83.8 pTM=0.748 ipTM=0.384 tol=1.73
2024-07-10 21:22:09,236 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=83.1 pTM=0.742 ipTM=0.362 tol=2.33
2024-07-10 21:22:22,342 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=82.6 pTM=0.723 ipTM=0.315 tol=1.07
2024-07-10 21:22:35,483 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=82.6 pTM=0.724 ipTM=0.308 tol=1.23
2024-07-10 21:22:48,638 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=82.9 pTM=0.721 ipTM=0.305 tol=1.23
2024-07-10 21:23:01,790 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=82.4 pTM=0.721 ipTM=0.303 tol=1.64
2024-07-10 21:23:14,944 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=83.1 pTM=0.724 ipTM=0.324 tol=1.95
2024-07-10 21:23:28,110 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=83.2 pTM=0.733 ipTM=0.341 tol=0.945
2024-07-10 21:23:41,281 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=83.6 pTM=0.733 ipTM=0.35 tol=1.45
2024-07-10 21:23:54,465 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=83.3 pTM=0.732 ipTM=0.335 tol=1.53
2024-07-10 21:24:07,644 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=83.3 pTM=0.726 ipTM=0.327 tol=0.854
2024-07-10 21:24:20,822 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=82.9 pTM=0.727 ipTM=0.324 tol=1.3
2024-07-10 21:24:34,022 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=83.5 pTM=0.729 ipTM=0.333 tol=1.55
2024-07-10 21:24:47,232 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=83.4 pTM=0.731 ipTM=0.332 tol=1.26
2024-07-10 21:25:00,432 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=83 pTM=0.72 ipTM=0.31 tol=0.668
2024-07-10 21:25:13,638 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=82.4 pTM=0.718 ipTM=0.292 tol=1.26
2024-07-10 21:25:26,854 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=82.6 pTM=0.714 ipTM=0.285 tol=0.779
2024-07-10 21:25:40,071 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=82.3 pTM=0.718 ipTM=0.289 tol=0.958
2024-07-10 21:25:53,271 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=82.8 pTM=0.718 ipTM=0.303 tol=1.48
2024-07-10 21:26:06,475 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=82.6 pTM=0.719 ipTM=0.296 tol=1.01
2024-07-10 21:26:19,673 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=83.1 pTM=0.725 ipTM=0.323 tol=0.998
2024-07-10 21:26:32,886 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=82.9 pTM=0.729 ipTM=0.328 tol=0.846
2024-07-10 21:26:46,084 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=83.4 pTM=0.729 ipTM=0.333 tol=1.86
2024-07-10 21:26:59,282 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=82.9 pTM=0.726 ipTM=0.32 tol=1.36
2024-07-10 21:27:12,468 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=83 pTM=0.72 ipTM=0.316 tol=0.981
2024-07-10 21:27:25,660 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=82.8 pTM=0.721 ipTM=0.307 tol=1.02
2024-07-10 21:27:38,859 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=83.2 pTM=0.724 ipTM=0.321 tol=0.795
2024-07-10 21:27:52,055 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=82.9 pTM=0.727 ipTM=0.322 tol=0.937
2024-07-10 21:27:52,056 alphafold2_multimer_v3_model_1_seed_000 took 575.7s (30 recycles)
2024-07-10 21:28:05,655 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=80.5 pTM=0.713 ipTM=0.347
2024-07-10 21:28:18,927 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=85.9 pTM=0.805 ipTM=0.605 tol=4.85
2024-07-10 21:28:32,210 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=86 pTM=0.797 ipTM=0.563 tol=1.29
2024-07-10 21:28:45,507 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=86.1 pTM=0.793 ipTM=0.548 tol=0.663
2024-07-10 21:28:58,783 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=86.1 pTM=0.794 ipTM=0.562 tol=1.11
2024-07-10 21:29:12,050 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=86.2 pTM=0.795 ipTM=0.558 tol=0.727
2024-07-10 21:29:25,295 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=86.5 pTM=0.8 ipTM=0.582 tol=0.576
2024-07-10 21:29:38,573 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=86.7 pTM=0.805 ipTM=0.6 tol=0.636
2024-07-10 21:29:51,855 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=86.7 pTM=0.804 ipTM=0.601 tol=0.351
2024-07-10 21:29:51,856 alphafold2_multimer_v3_model_2_seed_000 took 119.4s (8 recycles)
2024-07-10 21:30:05,490 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=76 pTM=0.644 ipTM=0.144
2024-07-10 21:30:18,751 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=80.7 pTM=0.733 ipTM=0.339 tol=15.9
2024-07-10 21:30:32,078 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=83.6 pTM=0.764 ipTM=0.419 tol=5.91
2024-07-10 21:30:45,409 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=84.1 pTM=0.752 ipTM=0.378 tol=1.38
2024-07-10 21:30:58,737 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=83.9 pTM=0.746 ipTM=0.358 tol=0.706
2024-07-10 21:31:12,056 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=84.6 pTM=0.748 ipTM=0.371 tol=1.16
2024-07-10 21:31:25,345 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=84.1 pTM=0.737 ipTM=0.336 tol=0.89
2024-07-10 21:31:38,622 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=84.4 pTM=0.742 ipTM=0.358 tol=1.15
2024-07-10 21:31:51,904 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=84.1 pTM=0.74 ipTM=0.344 tol=0.783
2024-07-10 21:32:05,165 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=84.2 pTM=0.729 ipTM=0.312 tol=0.705
2024-07-10 21:32:18,444 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=83.8 pTM=0.73 ipTM=0.322 tol=1
2024-07-10 21:32:31,715 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=84.4 pTM=0.734 ipTM=0.328 tol=1.34
2024-07-10 21:32:44,983 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=84.1 pTM=0.735 ipTM=0.335 tol=1.06
2024-07-10 21:32:58,229 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=84.1 pTM=0.724 ipTM=0.301 tol=0.814
2024-07-10 21:33:11,494 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=84 pTM=0.739 ipTM=0.357 tol=0.559
2024-07-10 21:33:24,744 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=84.7 pTM=0.739 ipTM=0.348 tol=1.14
2024-07-10 21:33:38,007 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=84.4 pTM=0.737 ipTM=0.344 tol=1.04
2024-07-10 21:33:51,271 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=84 pTM=0.72 ipTM=0.29 tol=0.4
2024-07-10 21:33:51,272 alphafold2_multimer_v3_model_3_seed_000 took 239.0s (17 recycles)
2024-07-10 21:34:04,914 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=77.2 pTM=0.707 ipTM=0.328
2024-07-10 21:34:18,270 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=83 pTM=0.799 ipTM=0.598 tol=5.02
2024-07-10 21:34:31,627 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=84.5 pTM=0.813 ipTM=0.669 tol=1.95
2024-07-10 21:34:44,982 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=84.9 pTM=0.793 ipTM=0.556 tol=1.03
2024-07-10 21:34:58,329 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=84.2 pTM=0.775 ipTM=0.477 tol=2.63
2024-07-10 21:35:11,657 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=83.8 pTM=0.759 ipTM=0.416 tol=1.37
2024-07-10 21:35:24,987 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=83.6 pTM=0.77 ipTM=0.445 tol=1.72
2024-07-10 21:35:38,318 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=83.5 pTM=0.742 ipTM=0.37 tol=0.808
2024-07-10 21:35:51,652 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=82.7 pTM=0.743 ipTM=0.369 tol=1.5
2024-07-10 21:36:04,962 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=83.2 pTM=0.732 ipTM=0.336 tol=0.887
2024-07-10 21:36:18,289 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=82.6 pTM=0.732 ipTM=0.329 tol=0.929
2024-07-10 21:36:31,595 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=82.4 pTM=0.724 ipTM=0.307 tol=0.592
2024-07-10 21:36:44,918 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=81.4 pTM=0.712 ipTM=0.268 tol=1.71
2024-07-10 21:36:58,221 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=81.7 pTM=0.717 ipTM=0.292 tol=1.22
2024-07-10 21:37:11,547 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=81.4 pTM=0.706 ipTM=0.245 tol=0.875
2024-07-10 21:37:24,882 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=80.8 pTM=0.71 ipTM=0.262 tol=0.678
2024-07-10 21:37:38,234 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=80 pTM=0.698 ipTM=0.208 tol=2.72
2024-07-10 21:37:51,606 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=79.1 pTM=0.703 ipTM=0.224 tol=8.8
2024-07-10 21:38:04,971 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=79.1 pTM=0.698 ipTM=0.205 tol=5.39
2024-07-10 21:38:18,335 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=79 pTM=0.701 ipTM=0.219 tol=6.2
2024-07-10 21:38:31,687 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=79.5 pTM=0.7 ipTM=0.214 tol=2.67
2024-07-10 21:38:45,050 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=79.6 pTM=0.702 ipTM=0.225 tol=3.23
2024-07-10 21:38:58,416 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=79.3 pTM=0.7 ipTM=0.217 tol=1.36
2024-07-10 21:39:11,789 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=79.4 pTM=0.699 ipTM=0.213 tol=0.934
2024-07-10 21:39:25,147 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=79 pTM=0.699 ipTM=0.217 tol=0.646
2024-07-10 21:39:38,510 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=79.4 pTM=0.7 ipTM=0.214 tol=0.902
2024-07-10 21:39:51,864 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=79.2 pTM=0.701 ipTM=0.214 tol=1.24
2024-07-10 21:40:05,208 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=79.4 pTM=0.7 ipTM=0.218 tol=1.67
2024-07-10 21:40:18,540 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=79.9 pTM=0.701 ipTM=0.223 tol=0.983
2024-07-10 21:40:31,886 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=79.7 pTM=0.701 ipTM=0.222 tol=1.33
2024-07-10 21:40:45,208 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=79.6 pTM=0.701 ipTM=0.217 tol=1.4
2024-07-10 21:40:45,209 alphafold2_multimer_v3_model_4_seed_000 took 413.5s (30 recycles)
2024-07-10 21:40:58,812 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=78.4 pTM=0.695 ipTM=0.25
2024-07-10 21:41:12,109 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=78.9 pTM=0.757 ipTM=0.402 tol=4.54
2024-07-10 21:41:25,430 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=81.6 pTM=0.733 ipTM=0.321 tol=5.68
2024-07-10 21:41:38,746 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=82.1 pTM=0.735 ipTM=0.315 tol=1.11
2024-07-10 21:41:52,037 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=82.7 pTM=0.75 ipTM=0.37 tol=1.21
2024-07-10 21:42:05,338 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=83.6 pTM=0.757 ipTM=0.404 tol=1.88
2024-07-10 21:42:18,640 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=83.1 pTM=0.75 ipTM=0.375 tol=1.23
2024-07-10 21:42:31,953 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=82.9 pTM=0.743 ipTM=0.352 tol=0.541
2024-07-10 21:42:45,282 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=82.9 pTM=0.745 ipTM=0.35 tol=0.282
2024-07-10 21:42:45,282 alphafold2_multimer_v3_model_5_seed_000 took 119.7s (8 recycles)
2024-07-10 21:42:45,680 reranking models by 'multimer' metric
2024-07-10 21:42:48,916 Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
2024-07-10 21:43:14,938 Relaxation took 29.3s
2024-07-10 21:43:14,938 rank_001_alphafold2_multimer_v3_model_2_seed_000 pLDDT=86.7 pTM=0.804 ipTM=0.601
2024-07-10 21:43:41,182 Relaxation took 26.2s
2024-07-10 21:43:41,183 rank_002_alphafold2_multimer_v3_model_5_seed_000 pLDDT=82.9 pTM=0.745 ipTM=0.35
2024-07-10 21:44:05,295 Relaxation took 24.1s
2024-07-10 21:44:05,295 rank_003_alphafold2_multimer_v3_model_1_seed_000 pLDDT=82.9 pTM=0.727 ipTM=0.322
2024-07-10 21:44:27,112 Relaxation took 21.8s
2024-07-10 21:44:27,113 rank_004_alphafold2_multimer_v3_model_3_seed_000 pLDDT=84 pTM=0.72 ipTM=0.29
2024-07-10 21:45:36,761 Relaxation took 69.6s
2024-07-10 21:45:36,761 rank_005_alphafold2_multimer_v3_model_4_seed_000 pLDDT=79.6 pTM=0.701 ipTM=0.217
2024-07-10 21:45:38,206 Done