2024-07-10 21:44:46,717 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3)
2024-07-10 21:44:47,057 Running on GPU
2024-07-10 21:44:50,852 Found 6 citations for tools or databases
2024-07-10 21:44:50,853 Query 1/1: KANTR_DHSO (length 433)
2024-07-10 21:44:51,322 Sleeping for 9s. Reason: PENDING
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2024-07-10 21:47:25,461 Sleeping for 8s. Reason: PENDING
2024-07-10 21:47:34,060 Sleeping for 9s. Reason: RUNNING
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2024-07-10 21:49:24,652 Setting max_seq=508, max_extra_seq=1946
2024-07-10 21:52:21,347 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=84.6 pTM=0.794 ipTM=0.109
2024-07-10 21:52:25,850 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=84.3 pTM=0.805 ipTM=0.159 tol=6.09
2024-07-10 21:52:30,339 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=84.3 pTM=0.803 ipTM=0.151 tol=1.92
2024-07-10 21:52:34,834 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=84.2 pTM=0.806 ipTM=0.164 tol=0.798
2024-07-10 21:52:39,325 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=84.2 pTM=0.808 ipTM=0.17 tol=0.599
2024-07-10 21:52:43,808 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=84.1 pTM=0.808 ipTM=0.17 tol=0.514
2024-07-10 21:52:48,292 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=84.2 pTM=0.808 ipTM=0.171 tol=0.243
2024-07-10 21:52:48,292 alphafold2_multimer_v3_model_1_seed_000 took 198.8s (6 recycles)
2024-07-10 21:52:52,886 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=83.9 pTM=0.808 ipTM=0.214
2024-07-10 21:52:57,348 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=85.1 pTM=0.803 ipTM=0.166 tol=2.89
2024-07-10 21:53:01,810 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=85.2 pTM=0.802 ipTM=0.153 tol=2.12
2024-07-10 21:53:06,274 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=85 pTM=0.805 ipTM=0.166 tol=3.57
2024-07-10 21:53:10,733 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=84.9 pTM=0.81 ipTM=0.195 tol=3.66
2024-07-10 21:53:15,189 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=84.8 pTM=0.812 ipTM=0.209 tol=1.69
2024-07-10 21:53:19,658 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=85.1 pTM=0.816 ipTM=0.235 tol=1.66
2024-07-10 21:53:24,120 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=85.3 pTM=0.819 ipTM=0.249 tol=0.65
2024-07-10 21:53:28,578 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=85.4 pTM=0.818 ipTM=0.246 tol=0.272
2024-07-10 21:53:28,579 alphafold2_multimer_v3_model_2_seed_000 took 40.2s (8 recycles)
2024-07-10 21:53:33,180 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=86.1 pTM=0.795 ipTM=0.141
2024-07-10 21:53:37,663 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=85.9 pTM=0.801 ipTM=0.142 tol=2.75
2024-07-10 21:53:42,148 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=85.7 pTM=0.808 ipTM=0.178 tol=4.92
2024-07-10 21:53:46,629 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=85.6 pTM=0.811 ipTM=0.19 tol=1.8
2024-07-10 21:53:51,110 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=85.3 pTM=0.814 ipTM=0.218 tol=0.918
2024-07-10 21:53:55,585 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=84.9 pTM=0.816 ipTM=0.231 tol=0.745
2024-07-10 21:54:00,068 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=85.1 pTM=0.817 ipTM=0.233 tol=0.949
2024-07-10 21:54:04,539 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=84.9 pTM=0.817 ipTM=0.237 tol=0.874
2024-07-10 21:54:09,012 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=85 pTM=0.816 ipTM=0.236 tol=0.566
2024-07-10 21:54:13,487 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=84.8 pTM=0.818 ipTM=0.25 tol=0.59
2024-07-10 21:54:17,958 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=84.8 pTM=0.818 ipTM=0.255 tol=0.551
2024-07-10 21:54:22,429 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=84.9 pTM=0.817 ipTM=0.25 tol=0.387
2024-07-10 21:54:22,430 alphafold2_multimer_v3_model_3_seed_000 took 53.7s (11 recycles)
2024-07-10 21:54:27,053 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=86.2 pTM=0.794 ipTM=0.0992
2024-07-10 21:54:31,554 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=85.9 pTM=0.808 ipTM=0.167 tol=13.8
2024-07-10 21:54:36,049 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=86.1 pTM=0.809 ipTM=0.167 tol=2.09
2024-07-10 21:54:40,547 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=86 pTM=0.811 ipTM=0.176 tol=1.11
2024-07-10 21:54:45,037 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=85.9 pTM=0.812 ipTM=0.183 tol=0.436
2024-07-10 21:54:45,038 alphafold2_multimer_v3_model_4_seed_000 took 22.5s (4 recycles)
2024-07-10 21:54:49,654 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=85.2 pTM=0.799 ipTM=0.155
2024-07-10 21:54:54,154 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=85.4 pTM=0.805 ipTM=0.161 tol=2.05
2024-07-10 21:54:58,641 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=85.4 pTM=0.807 ipTM=0.165 tol=0.969
2024-07-10 21:55:03,127 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=85.4 pTM=0.809 ipTM=0.174 tol=0.84
2024-07-10 21:55:07,609 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=85.4 pTM=0.81 ipTM=0.18 tol=0.824
2024-07-10 21:55:12,091 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=85.2 pTM=0.81 ipTM=0.182 tol=0.284
2024-07-10 21:55:12,091 alphafold2_multimer_v3_model_5_seed_000 took 26.9s (5 recycles)
2024-07-10 21:55:12,221 reranking models by 'multimer' metric
2024-07-10 21:55:15,420 Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
2024-07-10 21:55:46,100 Relaxation took 33.9s
2024-07-10 21:55:46,100 rank_001_alphafold2_multimer_v3_model_3_seed_000 pLDDT=84.9 pTM=0.817 ipTM=0.25
2024-07-10 21:56:02,832 Relaxation took 16.7s
2024-07-10 21:56:02,833 rank_002_alphafold2_multimer_v3_model_2_seed_000 pLDDT=85.4 pTM=0.818 ipTM=0.246
2024-07-10 21:56:12,251 Relaxation took 9.4s
2024-07-10 21:56:12,251 rank_003_alphafold2_multimer_v3_model_4_seed_000 pLDDT=85.9 pTM=0.812 ipTM=0.183
2024-07-10 21:56:22,144 Relaxation took 9.9s
2024-07-10 21:56:22,145 rank_004_alphafold2_multimer_v3_model_5_seed_000 pLDDT=85.2 pTM=0.81 ipTM=0.182
2024-07-10 21:56:37,033 Relaxation took 14.9s
2024-07-10 21:56:37,033 rank_005_alphafold2_multimer_v3_model_1_seed_000 pLDDT=84.2 pTM=0.808 ipTM=0.171
2024-07-10 21:56:37,965 Done