2024-07-10 21:46:15,471 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3) 2024-07-10 21:46:15,787 Running on GPU 2024-07-10 21:46:19,428 Found 6 citations for tools or databases 2024-07-10 21:46:19,428 Query 1/1: KAP0_ACBD4 (length 649) 2024-07-10 21:46:19,884 Sleeping for 10s. Reason: PENDING 2024-07-10 21:46:30,311 Sleeping for 8s. Reason: RUNNING 2024-07-10 21:46:38,736 Sleeping for 8s. Reason: RUNNING 2024-07-10 21:46:47,156 Sleeping for 8s. Reason: RUNNING 2024-07-10 21:46:56,706 Sleeping for 10s. Reason: RUNNING 2024-07-10 21:47:07,129 Sleeping for 5s. Reason: RUNNING 2024-07-10 21:47:12,554 Sleeping for 10s. Reason: RUNNING 2024-07-10 21:47:22,979 Sleeping for 6s. Reason: RUNNING 2024-07-10 21:47:29,391 Sleeping for 5s. Reason: RUNNING 2024-07-10 21:47:34,807 Sleeping for 6s. Reason: RUNNING 2024-07-10 21:47:41,402 Sleeping for 5s. Reason: RUNNING 2024-07-10 21:47:46,819 Sleeping for 9s. Reason: RUNNING 2024-07-10 21:47:56,285 Sleeping for 8s. Reason: RUNNING 2024-07-10 21:48:14,190 Sleeping for 8s. Reason: PENDING 2024-07-10 21:48:23,372 Sleeping for 7s. Reason: RUNNING 2024-07-10 21:48:30,804 Sleeping for 6s. Reason: RUNNING 2024-07-10 21:48:37,237 Sleeping for 6s. Reason: RUNNING 2024-07-10 21:48:44,010 Sleeping for 10s. Reason: RUNNING 2024-07-10 21:48:54,436 Sleeping for 7s. Reason: RUNNING 2024-07-10 21:49:05,597 Setting max_seq=508, max_extra_seq=2048 2024-07-10 21:51:58,991 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=56.1 pTM=0.295 ipTM=0.139 2024-07-10 21:52:07,416 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=58 pTM=0.312 ipTM=0.132 tol=12.8 2024-07-10 21:52:15,831 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=58.8 pTM=0.306 ipTM=0.138 tol=4.99 2024-07-10 21:52:24,254 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=59.6 pTM=0.303 ipTM=0.134 tol=2.29 2024-07-10 21:52:32,695 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=59.6 pTM=0.302 ipTM=0.136 tol=2.24 2024-07-10 21:52:41,134 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=60 pTM=0.304 ipTM=0.132 tol=2.31 2024-07-10 21:52:49,569 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=59.8 pTM=0.305 ipTM=0.136 tol=1.2 2024-07-10 21:52:58,006 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=59.8 pTM=0.303 ipTM=0.136 tol=1.6 2024-07-10 21:53:06,439 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=59.9 pTM=0.3 ipTM=0.137 tol=1.61 2024-07-10 21:53:14,880 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=59.7 pTM=0.3 ipTM=0.135 tol=1.53 2024-07-10 21:53:23,336 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=59.7 pTM=0.3 ipTM=0.136 tol=2.63 2024-07-10 21:53:31,771 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=59.5 pTM=0.3 ipTM=0.142 tol=1.49 2024-07-10 21:53:40,234 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=59.7 pTM=0.302 ipTM=0.139 tol=2.42 2024-07-10 21:53:48,684 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=59.8 pTM=0.304 ipTM=0.145 tol=2.15 2024-07-10 21:53:57,123 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=59.5 pTM=0.301 ipTM=0.142 tol=1.9 2024-07-10 21:54:05,589 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=59.4 pTM=0.305 ipTM=0.146 tol=1.79 2024-07-10 21:54:14,037 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=59.4 pTM=0.303 ipTM=0.147 tol=1.6 2024-07-10 21:54:22,490 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=59.5 pTM=0.305 ipTM=0.144 tol=1.33 2024-07-10 21:54:30,925 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=59.2 pTM=0.307 ipTM=0.148 tol=1.31 2024-07-10 21:54:39,364 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=58.9 pTM=0.306 ipTM=0.143 tol=1.05 2024-07-10 21:54:47,802 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=59.3 pTM=0.307 ipTM=0.146 tol=1.12 2024-07-10 21:54:56,237 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=59.4 pTM=0.308 ipTM=0.151 tol=0.797 2024-07-10 21:55:04,678 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=59.7 pTM=0.31 ipTM=0.14 tol=1.24 2024-07-10 21:55:13,115 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=59.6 pTM=0.308 ipTM=0.147 tol=1.11 2024-07-10 21:55:21,549 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=59.3 pTM=0.306 ipTM=0.161 tol=1.07 2024-07-10 21:55:29,988 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=59.5 pTM=0.312 ipTM=0.149 tol=0.814 2024-07-10 21:55:38,424 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=59.5 pTM=0.312 ipTM=0.148 tol=0.742 2024-07-10 21:55:46,863 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=59.2 pTM=0.309 ipTM=0.15 tol=0.968 2024-07-10 21:55:55,299 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=59.5 pTM=0.313 ipTM=0.146 tol=0.876 2024-07-10 21:56:03,739 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=59.7 pTM=0.311 ipTM=0.15 tol=0.96 2024-07-10 21:56:12,174 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=59.2 pTM=0.308 ipTM=0.149 tol=0.983 2024-07-10 21:56:12,174 alphafold2_multimer_v3_model_1_seed_000 took 421.6s (30 recycles) 2024-07-10 21:56:20,906 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=58.9 pTM=0.299 ipTM=0.137 2024-07-10 21:56:29,369 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=60.5 pTM=0.346 ipTM=0.176 tol=6.71 2024-07-10 21:56:37,838 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=63 pTM=0.385 ipTM=0.154 tol=8.1 2024-07-10 21:56:46,307 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=62.5 pTM=0.394 ipTM=0.144 tol=10.4 2024-07-10 21:56:54,779 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=63.6 pTM=0.405 ipTM=0.157 tol=3.39 2024-07-10 21:57:03,237 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=63.6 pTM=0.409 ipTM=0.152 tol=4.22 2024-07-10 21:57:11,695 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=63.6 pTM=0.408 ipTM=0.155 tol=2.57 2024-07-10 21:57:20,157 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=63.8 pTM=0.41 ipTM=0.154 tol=1.65 2024-07-10 21:57:28,649 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=63.4 pTM=0.406 ipTM=0.141 tol=1.4 2024-07-10 21:57:37,111 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=63.5 pTM=0.411 ipTM=0.147 tol=2.09 2024-07-10 21:57:45,588 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=64.1 pTM=0.415 ipTM=0.144 tol=1.84 2024-07-10 21:57:54,065 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=63.9 pTM=0.408 ipTM=0.171 tol=2 2024-07-10 21:58:02,538 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=63.9 pTM=0.421 ipTM=0.151 tol=2.68 2024-07-10 21:58:11,007 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=64.3 pTM=0.422 ipTM=0.143 tol=1.58 2024-07-10 21:58:19,476 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=64 pTM=0.412 ipTM=0.144 tol=2.05 2024-07-10 21:58:27,939 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=63.9 pTM=0.415 ipTM=0.141 tol=1.67 2024-07-10 21:58:36,402 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=63.9 pTM=0.419 ipTM=0.154 tol=1.75 2024-07-10 21:58:44,881 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=64.4 pTM=0.41 ipTM=0.135 tol=3.04 2024-07-10 21:58:53,351 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=64.4 pTM=0.413 ipTM=0.151 tol=2.68 2024-07-10 21:59:01,825 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=64 pTM=0.408 ipTM=0.161 tol=2.75 2024-07-10 21:59:10,311 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=64.2 pTM=0.407 ipTM=0.162 tol=2.64 2024-07-10 21:59:18,797 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=64.6 pTM=0.408 ipTM=0.157 tol=2.65 2024-07-10 21:59:27,281 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=65 pTM=0.418 ipTM=0.152 tol=1.47 2024-07-10 21:59:35,754 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=64.9 pTM=0.418 ipTM=0.162 tol=1.65 2024-07-10 21:59:44,225 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=64.8 pTM=0.414 ipTM=0.163 tol=1.02 2024-07-10 21:59:52,691 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=64.9 pTM=0.419 ipTM=0.146 tol=1.08 2024-07-10 22:00:01,178 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=64.9 pTM=0.42 ipTM=0.169 tol=1.25 2024-07-10 22:00:09,646 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=65 pTM=0.419 ipTM=0.158 tol=1.24 2024-07-10 22:00:18,161 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=65.4 pTM=0.423 ipTM=0.16 tol=1.05 2024-07-10 22:00:26,646 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=65.2 pTM=0.421 ipTM=0.155 tol=1.01 2024-07-10 22:00:35,113 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=64.9 pTM=0.419 ipTM=0.162 tol=1.31 2024-07-10 22:00:35,114 alphafold2_multimer_v3_model_2_seed_000 took 262.7s (30 recycles) 2024-07-10 22:00:43,847 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=57.3 pTM=0.296 ipTM=0.137 2024-07-10 22:00:52,330 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=58.9 pTM=0.296 ipTM=0.138 tol=10.8 2024-07-10 22:01:00,856 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=59.1 pTM=0.305 ipTM=0.142 tol=6.52 2024-07-10 22:01:09,357 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=59.3 pTM=0.302 ipTM=0.138 tol=7.48 2024-07-10 22:01:17,878 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=59.9 pTM=0.304 ipTM=0.143 tol=4.83 2024-07-10 22:01:26,356 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=59.7 pTM=0.302 ipTM=0.143 tol=3.14 2024-07-10 22:01:34,850 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=60 pTM=0.306 ipTM=0.147 tol=1.81 2024-07-10 22:01:43,323 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=59.9 pTM=0.302 ipTM=0.144 tol=1.72 2024-07-10 22:01:51,808 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=60.4 pTM=0.302 ipTM=0.142 tol=1.52 2024-07-10 22:02:00,277 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=59.8 pTM=0.302 ipTM=0.144 tol=2 2024-07-10 22:02:08,753 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=60 pTM=0.301 ipTM=0.141 tol=1.41 2024-07-10 22:02:17,230 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=60.1 pTM=0.303 ipTM=0.146 tol=1.18 2024-07-10 22:02:25,710 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=60.3 pTM=0.304 ipTM=0.146 tol=0.859 2024-07-10 22:02:34,219 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=60.3 pTM=0.305 ipTM=0.149 tol=0.903 2024-07-10 22:02:42,707 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=59.8 pTM=0.303 ipTM=0.145 tol=1.31 2024-07-10 22:02:51,189 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=60 pTM=0.304 ipTM=0.147 tol=0.92 2024-07-10 22:02:59,668 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=60.5 pTM=0.303 ipTM=0.143 tol=1.2 2024-07-10 22:03:08,156 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=60.1 pTM=0.304 ipTM=0.145 tol=0.924 2024-07-10 22:03:16,634 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=60.3 pTM=0.305 ipTM=0.149 tol=0.978 2024-07-10 22:03:25,099 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=60.2 pTM=0.304 ipTM=0.151 tol=1.29 2024-07-10 22:03:33,582 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=59.9 pTM=0.302 ipTM=0.146 tol=1.6 2024-07-10 22:03:42,081 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=60.5 pTM=0.3 ipTM=0.141 tol=2.9 2024-07-10 22:03:50,578 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=60.6 pTM=0.303 ipTM=0.146 tol=2.36 2024-07-10 22:03:59,074 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=60.5 pTM=0.301 ipTM=0.141 tol=2.18 2024-07-10 22:04:07,579 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=60.3 pTM=0.302 ipTM=0.145 tol=2.12 2024-07-10 22:04:16,076 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=60.5 pTM=0.301 ipTM=0.143 tol=2.22 2024-07-10 22:04:24,550 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=60.5 pTM=0.302 ipTM=0.142 tol=2.13 2024-07-10 22:04:33,044 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=60.2 pTM=0.301 ipTM=0.141 tol=1.74 2024-07-10 22:04:41,527 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=60.5 pTM=0.301 ipTM=0.142 tol=1.16 2024-07-10 22:04:49,998 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=60.2 pTM=0.301 ipTM=0.141 tol=1.03 2024-07-10 22:04:58,500 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=60.4 pTM=0.301 ipTM=0.138 tol=1.19 2024-07-10 22:04:58,500 alphafold2_multimer_v3_model_3_seed_000 took 263.1s (30 recycles) 2024-07-10 22:05:07,217 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=55.5 pTM=0.306 ipTM=0.142 2024-07-10 22:05:15,685 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=58.3 pTM=0.317 ipTM=0.144 tol=8.59 2024-07-10 22:05:24,163 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=58.7 pTM=0.319 ipTM=0.148 tol=7.32 2024-07-10 22:05:32,654 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=59.5 pTM=0.321 ipTM=0.139 tol=4.16 2024-07-10 22:05:41,131 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=58.8 pTM=0.314 ipTM=0.141 tol=5.51 2024-07-10 22:05:49,592 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=57.4 pTM=0.313 ipTM=0.142 tol=13.7 2024-07-10 22:05:58,075 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=57.8 pTM=0.316 ipTM=0.152 tol=6 2024-07-10 22:06:06,538 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=57.9 pTM=0.304 ipTM=0.147 tol=7.29 2024-07-10 22:06:15,011 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=58 pTM=0.307 ipTM=0.147 tol=4.35 2024-07-10 22:06:23,488 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=57.8 pTM=0.303 ipTM=0.15 tol=2.07 2024-07-10 22:06:31,965 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=57.9 pTM=0.304 ipTM=0.148 tol=1.17 2024-07-10 22:06:40,439 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=58.2 pTM=0.303 ipTM=0.151 tol=1.4 2024-07-10 22:06:48,919 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=57.8 pTM=0.305 ipTM=0.15 tol=1.09 2024-07-10 22:06:57,404 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=58.2 pTM=0.307 ipTM=0.144 tol=0.959 2024-07-10 22:07:05,881 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=57.5 pTM=0.303 ipTM=0.15 tol=1.03 2024-07-10 22:07:14,350 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=57.7 pTM=0.304 ipTM=0.141 tol=1.07 2024-07-10 22:07:22,820 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=58.1 pTM=0.306 ipTM=0.149 tol=1.2 2024-07-10 22:07:31,318 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=57.7 pTM=0.302 ipTM=0.142 tol=1.29 2024-07-10 22:07:39,780 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=58.1 pTM=0.308 ipTM=0.149 tol=1.45 2024-07-10 22:07:48,264 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=57.8 pTM=0.305 ipTM=0.144 tol=1.22 2024-07-10 22:07:56,733 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=57.8 pTM=0.306 ipTM=0.149 tol=1.45 2024-07-10 22:08:05,204 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=58 pTM=0.306 ipTM=0.144 tol=1.51 2024-07-10 22:08:13,710 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=58.3 pTM=0.312 ipTM=0.152 tol=1.04 2024-07-10 22:08:22,186 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=58.4 pTM=0.306 ipTM=0.142 tol=1.05 2024-07-10 22:08:30,633 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=57.8 pTM=0.309 ipTM=0.157 tol=1.27 2024-07-10 22:08:39,108 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=58.2 pTM=0.304 ipTM=0.141 tol=1.88 2024-07-10 22:08:47,580 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=57.8 pTM=0.303 ipTM=0.149 tol=1.37 2024-07-10 22:08:56,055 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=58 pTM=0.303 ipTM=0.141 tol=1.2 2024-07-10 22:09:04,501 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=58.2 pTM=0.306 ipTM=0.149 tol=1.86 2024-07-10 22:09:12,963 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=58.2 pTM=0.308 ipTM=0.145 tol=1.44 2024-07-10 22:09:21,440 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=58 pTM=0.307 ipTM=0.148 tol=1.06 2024-07-10 22:09:21,440 alphafold2_multimer_v3_model_4_seed_000 took 262.7s (30 recycles) 2024-07-10 22:09:30,170 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=56.1 pTM=0.308 ipTM=0.13 2024-07-10 22:09:38,637 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=57.2 pTM=0.32 ipTM=0.145 tol=10.1 2024-07-10 22:09:47,087 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=58.4 pTM=0.324 ipTM=0.149 tol=7.34 2024-07-10 22:09:55,557 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=57.2 pTM=0.318 ipTM=0.143 tol=7.17 2024-07-10 22:10:04,012 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=58.2 pTM=0.328 ipTM=0.151 tol=4.43 2024-07-10 22:10:12,470 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=58.3 pTM=0.327 ipTM=0.15 tol=2.8 2024-07-10 22:10:20,922 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=58.1 pTM=0.333 ipTM=0.152 tol=1.72 2024-07-10 22:10:29,381 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=58 pTM=0.323 ipTM=0.157 tol=1.58 2024-07-10 22:10:37,837 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=58.2 pTM=0.322 ipTM=0.152 tol=1.8 2024-07-10 22:10:46,335 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=58 pTM=0.325 ipTM=0.152 tol=2.27 2024-07-10 22:10:54,833 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=59 pTM=0.332 ipTM=0.153 tol=4.28 2024-07-10 22:11:03,342 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=58.6 pTM=0.332 ipTM=0.152 tol=5.57 2024-07-10 22:11:11,817 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=59.4 pTM=0.344 ipTM=0.152 tol=4.14 2024-07-10 22:11:20,300 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=59 pTM=0.338 ipTM=0.15 tol=3.81 2024-07-10 22:11:28,779 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=59.2 pTM=0.337 ipTM=0.148 tol=2.89 2024-07-10 22:11:37,255 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=58.6 pTM=0.332 ipTM=0.148 tol=2.97 2024-07-10 22:11:45,735 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=59 pTM=0.329 ipTM=0.149 tol=4.07 2024-07-10 22:11:54,212 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=58.4 pTM=0.322 ipTM=0.148 tol=3.84 2024-07-10 22:12:02,678 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=58.9 pTM=0.326 ipTM=0.152 tol=4.55 2024-07-10 22:12:11,167 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=58.6 pTM=0.326 ipTM=0.15 tol=2.82 2024-07-10 22:12:19,646 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=58.5 pTM=0.317 ipTM=0.149 tol=1.93 2024-07-10 22:12:28,120 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=58.2 pTM=0.315 ipTM=0.146 tol=2.24 2024-07-10 22:12:36,609 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=58.9 pTM=0.326 ipTM=0.146 tol=3.21 2024-07-10 22:12:45,102 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=59.2 pTM=0.331 ipTM=0.147 tol=3.1 2024-07-10 22:12:53,623 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=59.3 pTM=0.335 ipTM=0.152 tol=2.13 2024-07-10 22:13:02,109 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=59 pTM=0.336 ipTM=0.144 tol=3.92 2024-07-10 22:13:10,583 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=59.2 pTM=0.329 ipTM=0.148 tol=2.7 2024-07-10 22:13:19,071 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=58.8 pTM=0.333 ipTM=0.146 tol=1.95 2024-07-10 22:13:27,541 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=59.6 pTM=0.344 ipTM=0.148 tol=3.58 2024-07-10 22:13:36,020 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=59.7 pTM=0.347 ipTM=0.149 tol=2.77 2024-07-10 22:13:44,499 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=59.6 pTM=0.338 ipTM=0.149 tol=1.82 2024-07-10 22:13:44,500 alphafold2_multimer_v3_model_5_seed_000 took 262.8s (30 recycles) 2024-07-10 22:13:44,774 reranking models by 'multimer' metric 2024-07-10 22:13:45,815 Warning: importing 'simtk.openmm' is deprecated. Import 'openmm' instead. 2024-07-10 22:14:28,378 Relaxation took 43.6s 2024-07-10 22:14:28,378 rank_001_alphafold2_multimer_v3_model_2_seed_000 pLDDT=64.9 pTM=0.419 ipTM=0.162 2024-07-10 22:15:23,035 Relaxation took 54.7s 2024-07-10 22:15:23,036 rank_002_alphafold2_multimer_v3_model_5_seed_000 pLDDT=59.6 pTM=0.338 ipTM=0.149 2024-07-10 22:16:13,630 Relaxation took 50.6s 2024-07-10 22:16:13,630 rank_003_alphafold2_multimer_v3_model_1_seed_000 pLDDT=59.2 pTM=0.308 ipTM=0.149 2024-07-10 22:16:51,739 Relaxation took 38.1s 2024-07-10 22:16:51,739 rank_004_alphafold2_multimer_v3_model_4_seed_000 pLDDT=58 pTM=0.307 ipTM=0.148 2024-07-10 22:17:13,501 Relaxation took 21.8s 2024-07-10 22:17:13,501 rank_005_alphafold2_multimer_v3_model_3_seed_000 pLDDT=60.4 pTM=0.301 ipTM=0.138 2024-07-10 22:17:14,770 Done