2024-07-10 23:35:42,101 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3)
2024-07-10 23:35:42,437 Running on GPU
2024-07-10 23:35:47,031 Found 6 citations for tools or databases
2024-07-10 23:35:47,032 Query 1/1: KDM5C_CXCR5 (length 1932)
2024-07-10 23:35:47,524 Sleeping for 5s. Reason: PENDING
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2024-07-10 23:39:31,039 Sleeping for 10s. Reason: RUNNING
2024-07-10 23:40:18,965 Sleeping for 9s. Reason: PENDING
2024-07-10 23:40:28,376 Sleeping for 6s. Reason: RUNNING
2024-07-10 23:40:34,797 Sleeping for 10s. Reason: RUNNING
2024-07-10 23:40:45,222 Sleeping for 6s. Reason: RUNNING
2024-07-10 23:40:51,642 Sleeping for 6s. Reason: RUNNING
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2024-07-10 23:41:05,484 Sleeping for 8s. Reason: RUNNING
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2024-07-10 23:42:21,161 Sleeping for 6s. Reason: RUNNING
2024-07-10 23:42:27,574 Sleeping for 5s. Reason: RUNNING
2024-07-10 23:42:33,055 Sleeping for 8s. Reason: RUNNING
2024-07-10 23:42:41,476 Sleeping for 9s. Reason: RUNNING
2024-07-10 23:42:50,899 Sleeping for 8s. Reason: RUNNING
2024-07-10 23:42:59,328 Sleeping for 7s. Reason: RUNNING
2024-07-10 23:43:06,748 Sleeping for 10s. Reason: RUNNING
2024-07-10 23:43:33,192 Setting max_seq=508, max_extra_seq=2048
2024-07-10 23:48:16,001 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=66.5 pTM=0.444 ipTM=0.222
2024-07-10 23:50:38,990 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=66.1 pTM=0.438 ipTM=0.228 tol=16.5
2024-07-10 23:53:02,048 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=66.1 pTM=0.441 ipTM=0.252 tol=9.65
2024-07-10 23:55:24,941 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=66.2 pTM=0.449 ipTM=0.304 tol=4.31
2024-07-10 23:57:47,805 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=66.4 pTM=0.454 ipTM=0.317 tol=3.54
2024-07-11 00:00:10,697 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=66.1 pTM=0.447 ipTM=0.285 tol=3.22
2024-07-11 00:02:33,626 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=66 pTM=0.445 ipTM=0.281 tol=4.02
2024-07-11 00:04:56,589 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=66.2 pTM=0.446 ipTM=0.273 tol=1.94
2024-07-11 00:07:19,556 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=66.2 pTM=0.446 ipTM=0.292 tol=8.82
2024-07-11 00:09:42,539 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=66.6 pTM=0.448 ipTM=0.29 tol=5
2024-07-11 00:12:05,484 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=66.2 pTM=0.443 ipTM=0.253 tol=6.38
2024-07-11 00:14:28,440 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=66.1 pTM=0.443 ipTM=0.254 tol=3.7
2024-07-11 00:16:51,341 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=66.1 pTM=0.444 ipTM=0.256 tol=5.73
2024-07-11 00:19:14,266 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=66.1 pTM=0.443 ipTM=0.259 tol=6.21
2024-07-11 00:21:37,142 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=66.1 pTM=0.441 ipTM=0.249 tol=6
2024-07-11 00:23:59,932 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=65.9 pTM=0.44 ipTM=0.256 tol=4.22
2024-07-11 00:26:22,785 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=66.1 pTM=0.44 ipTM=0.25 tol=7.7
2024-07-11 00:28:45,667 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=66.2 pTM=0.441 ipTM=0.263 tol=5.21
2024-07-11 00:31:08,589 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=65.9 pTM=0.442 ipTM=0.266 tol=3.87
2024-07-11 00:33:31,435 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=65.8 pTM=0.438 ipTM=0.261 tol=5.05
2024-07-11 00:35:54,373 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=65.8 pTM=0.437 ipTM=0.251 tol=3.11
2024-07-11 00:38:17,258 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=65.8 pTM=0.435 ipTM=0.244 tol=4.27
2024-07-11 00:40:40,111 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=65.8 pTM=0.437 ipTM=0.246 tol=5.06
2024-07-11 00:43:03,043 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=65.9 pTM=0.439 ipTM=0.258 tol=5.74
2024-07-11 00:45:26,019 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=65.6 pTM=0.436 ipTM=0.251 tol=6.35
2024-07-11 00:47:49,023 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=66 pTM=0.439 ipTM=0.294 tol=10.2
2024-07-11 00:50:11,972 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=66.4 pTM=0.443 ipTM=0.281 tol=7.16
2024-07-11 00:52:35,001 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=66.2 pTM=0.437 ipTM=0.248 tol=7.12
2024-07-11 00:54:57,850 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=66.2 pTM=0.444 ipTM=0.293 tol=5.12
2024-07-11 00:57:20,634 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=66.2 pTM=0.449 ipTM=0.305 tol=3.44
2024-07-11 00:59:43,465 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=65.8 pTM=0.441 ipTM=0.258 tol=4.36
2024-07-11 00:59:43,467 alphafold2_multimer_v3_model_1_seed_000 took 4565.4s (30 recycles)
2024-07-11 01:02:08,691 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=66.2 pTM=0.448 ipTM=0.225
2024-07-11 01:04:31,748 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=65.4 pTM=0.458 ipTM=0.283 tol=30.7
2024-07-11 01:06:54,878 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=66.4 pTM=0.456 ipTM=0.26 tol=7.72
2024-07-11 01:09:17,988 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=66.4 pTM=0.446 ipTM=0.222 tol=5.8
2024-07-11 01:11:41,083 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=66.8 pTM=0.447 ipTM=0.228 tol=5.45
2024-07-11 01:14:04,179 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=66.8 pTM=0.446 ipTM=0.218 tol=5.14
2024-07-11 01:16:27,301 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=66.9 pTM=0.446 ipTM=0.209 tol=2.98
2024-07-11 01:18:50,422 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=67.2 pTM=0.448 ipTM=0.211 tol=2.1
2024-07-11 01:21:13,604 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=67.3 pTM=0.449 ipTM=0.215 tol=2.96
2024-07-11 01:23:36,736 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=67.6 pTM=0.449 ipTM=0.215 tol=3.21
2024-07-11 01:25:59,913 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=67.4 pTM=0.449 ipTM=0.213 tol=2.03
2024-07-11 01:28:23,057 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=67.2 pTM=0.45 ipTM=0.209 tol=2.01
2024-07-11 01:30:46,181 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=67.1 pTM=0.448 ipTM=0.203 tol=2.53
2024-07-11 01:33:09,255 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=67.2 pTM=0.448 ipTM=0.203 tol=1.41
2024-07-11 01:35:32,299 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=67.4 pTM=0.448 ipTM=0.203 tol=1.64
2024-07-11 01:37:55,318 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=66.9 pTM=0.447 ipTM=0.204 tol=0.99
2024-07-11 01:40:18,352 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=67.5 pTM=0.449 ipTM=0.204 tol=1.41
2024-07-11 01:42:41,448 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=67 pTM=0.446 ipTM=0.202 tol=0.858
2024-07-11 01:45:04,565 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=66.8 pTM=0.445 ipTM=0.202 tol=0.877
2024-07-11 01:47:27,637 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=67 pTM=0.446 ipTM=0.202 tol=1.2
2024-07-11 01:49:50,722 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=66.9 pTM=0.446 ipTM=0.2 tol=1.35
2024-07-11 01:52:13,829 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=66.9 pTM=0.446 ipTM=0.2 tol=0.659
2024-07-11 01:54:36,892 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=67.1 pTM=0.446 ipTM=0.203 tol=1.3
2024-07-11 01:56:59,960 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=67.1 pTM=0.445 ipTM=0.201 tol=0.919
2024-07-11 01:59:23,096 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=66.9 pTM=0.445 ipTM=0.2 tol=1.06
2024-07-11 02:01:46,213 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=66.9 pTM=0.444 ipTM=0.201 tol=1.2
2024-07-11 02:04:09,333 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=67.5 pTM=0.447 ipTM=0.206 tol=2.59
2024-07-11 02:06:32,485 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=67.1 pTM=0.446 ipTM=0.202 tol=1.38
2024-07-11 02:08:55,612 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=66.8 pTM=0.446 ipTM=0.201 tol=3.23
2024-07-11 02:11:18,761 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=66.8 pTM=0.447 ipTM=0.198 tol=2.53
2024-07-11 02:13:41,910 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=66.9 pTM=0.447 ipTM=0.198 tol=1.14
2024-07-11 02:13:41,913 alphafold2_multimer_v3_model_2_seed_000 took 4436.3s (30 recycles)
2024-07-11 02:16:07,260 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=65.8 pTM=0.447 ipTM=0.252
2024-07-11 02:18:30,236 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=65.6 pTM=0.477 ipTM=0.365 tol=23.9
2024-07-11 02:20:53,164 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=64.9 pTM=0.453 ipTM=0.275 tol=9.54
2024-07-11 02:23:16,080 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=65.3 pTM=0.454 ipTM=0.268 tol=9.3
2024-07-11 02:25:39,033 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=65.1 pTM=0.453 ipTM=0.264 tol=7.42
2024-07-11 02:28:02,013 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=64.8 pTM=0.45 ipTM=0.269 tol=7.35
2024-07-11 02:30:24,972 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=65.4 pTM=0.456 ipTM=0.284 tol=9.34
2024-07-11 02:32:47,914 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=64.9 pTM=0.453 ipTM=0.273 tol=5.37
2024-07-11 02:35:10,855 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=65.6 pTM=0.461 ipTM=0.302 tol=7.18
2024-07-11 02:37:33,773 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=65.1 pTM=0.456 ipTM=0.284 tol=6.34
2024-07-11 02:39:56,730 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=65.6 pTM=0.459 ipTM=0.302 tol=6.37
2024-07-11 02:42:19,636 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=65.4 pTM=0.466 ipTM=0.334 tol=6.39
2024-07-11 02:44:42,575 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=66.1 pTM=0.464 ipTM=0.326 tol=6.08
2024-07-11 02:47:05,480 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=65.2 pTM=0.459 ipTM=0.31 tol=5.44
2024-07-11 02:49:28,420 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=65.7 pTM=0.458 ipTM=0.296 tol=4.52
2024-07-11 02:51:51,386 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=65.1 pTM=0.457 ipTM=0.295 tol=3.31
2024-07-11 02:54:14,404 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=65.4 pTM=0.456 ipTM=0.285 tol=2.7
2024-07-11 02:56:37,387 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=65.1 pTM=0.456 ipTM=0.28 tol=3.62
2024-07-11 02:59:00,355 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=65.2 pTM=0.456 ipTM=0.285 tol=4.41
2024-07-11 03:01:23,350 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=64.8 pTM=0.453 ipTM=0.28 tol=4.03
2024-07-11 03:03:46,370 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=65.3 pTM=0.452 ipTM=0.278 tol=4
2024-07-11 03:06:09,383 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=64.8 pTM=0.453 ipTM=0.278 tol=4.99
2024-07-11 03:08:32,395 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=65.2 pTM=0.451 ipTM=0.27 tol=4.98
2024-07-11 03:10:55,390 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=64.9 pTM=0.453 ipTM=0.276 tol=6
2024-07-11 03:13:18,387 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=65.4 pTM=0.457 ipTM=0.293 tol=5.76
2024-07-11 03:15:41,430 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=65 pTM=0.453 ipTM=0.277 tol=4.75
2024-07-11 03:18:04,423 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=65.4 pTM=0.458 ipTM=0.301 tol=4.02
2024-07-11 03:20:27,341 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=65.2 pTM=0.459 ipTM=0.304 tol=3.91
2024-07-11 03:22:50,296 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=65.6 pTM=0.46 ipTM=0.305 tol=5.28
2024-07-11 03:25:13,263 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=65.1 pTM=0.457 ipTM=0.292 tol=4.64
2024-07-11 03:27:36,198 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=65.6 pTM=0.463 ipTM=0.31 tol=4.34
2024-07-11 03:27:36,200 alphafold2_multimer_v3_model_3_seed_000 took 4432.1s (30 recycles)
2024-07-11 03:30:01,511 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=66.6 pTM=0.438 ipTM=0.194
2024-07-11 03:32:24,490 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=66.4 pTM=0.478 ipTM=0.465 tol=23.9
2024-07-11 03:34:47,464 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=66.5 pTM=0.474 ipTM=0.407 tol=8.59
2024-07-11 03:37:10,662 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=66.4 pTM=0.451 ipTM=0.298 tol=10.2
2024-07-11 03:39:33,737 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=66.1 pTM=0.457 ipTM=0.324 tol=9.61
2024-07-11 03:41:56,835 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=66.4 pTM=0.452 ipTM=0.289 tol=4.91
2024-07-11 03:44:19,906 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=65.9 pTM=0.452 ipTM=0.296 tol=2.83
2024-07-11 03:46:43,087 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=66.2 pTM=0.45 ipTM=0.281 tol=3.02
2024-07-11 03:49:06,289 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=65.9 pTM=0.447 ipTM=0.265 tol=2.69
2024-07-11 03:51:29,416 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=66 pTM=0.447 ipTM=0.274 tol=2.41
2024-07-11 03:53:52,486 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=65.6 pTM=0.447 ipTM=0.266 tol=2.53
2024-07-11 03:56:15,457 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=65.8 pTM=0.455 ipTM=0.306 tol=3.11
2024-07-11 03:58:38,532 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=65.9 pTM=0.446 ipTM=0.268 tol=2.71
2024-07-11 04:01:01,579 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=65.8 pTM=0.446 ipTM=0.265 tol=2.39
2024-07-11 04:03:24,617 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=65.7 pTM=0.446 ipTM=0.269 tol=2.26
2024-07-11 04:05:47,672 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=65.7 pTM=0.447 ipTM=0.275 tol=1.69
2024-07-11 04:08:10,723 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=65.8 pTM=0.448 ipTM=0.269 tol=3.49
2024-07-11 04:10:33,734 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=66.2 pTM=0.456 ipTM=0.307 tol=3.96
2024-07-11 04:12:56,716 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=66.2 pTM=0.458 ipTM=0.324 tol=2.89
2024-07-11 04:15:19,690 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=66.5 pTM=0.458 ipTM=0.318 tol=2.32
2024-07-11 04:17:42,739 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=66.2 pTM=0.454 ipTM=0.307 tol=2.62
2024-07-11 04:20:05,820 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=66.2 pTM=0.455 ipTM=0.312 tol=1.95
2024-07-11 04:22:28,906 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=66.1 pTM=0.449 ipTM=0.287 tol=1.43
2024-07-11 04:24:51,962 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=66 pTM=0.453 ipTM=0.305 tol=2.18
2024-07-11 04:27:15,021 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=66.4 pTM=0.46 ipTM=0.336 tol=2.4
2024-07-11 04:29:38,064 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=66.5 pTM=0.459 ipTM=0.323 tol=3.27
2024-07-11 04:32:01,046 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=66.7 pTM=0.461 ipTM=0.334 tol=1.49
2024-07-11 04:34:24,096 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=66.7 pTM=0.457 ipTM=0.312 tol=1.26
2024-07-11 04:36:47,161 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=66.3 pTM=0.457 ipTM=0.317 tol=4.38
2024-07-11 04:39:10,134 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=66.7 pTM=0.464 ipTM=0.331 tol=3.17
2024-07-11 04:41:33,104 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=66.8 pTM=0.467 ipTM=0.344 tol=1.8
2024-07-11 04:41:33,106 alphafold2_multimer_v3_model_4_seed_000 took 4434.8s (30 recycles)
2024-07-11 04:43:58,320 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=65 pTM=0.446 ipTM=0.24
2024-07-11 04:46:21,272 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=64.6 pTM=0.453 ipTM=0.237 tol=16.4
2024-07-11 04:48:44,250 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=65 pTM=0.479 ipTM=0.411 tol=10.2
2024-07-11 04:51:07,107 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=64.9 pTM=0.457 ipTM=0.282 tol=7
2024-07-11 04:53:29,982 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=65.1 pTM=0.449 ipTM=0.246 tol=4.49
2024-07-11 04:55:52,815 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=65.1 pTM=0.448 ipTM=0.23 tol=4.06
2024-07-11 04:58:15,631 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=65.1 pTM=0.447 ipTM=0.228 tol=3.37
2024-07-11 05:00:38,407 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=65.4 pTM=0.448 ipTM=0.233 tol=5.06
2024-07-11 05:03:01,233 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=65.1 pTM=0.448 ipTM=0.234 tol=4.33
2024-07-11 05:05:24,001 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=65.2 pTM=0.449 ipTM=0.235 tol=4.87
2024-07-11 05:07:46,832 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=65 pTM=0.447 ipTM=0.226 tol=3.74
2024-07-11 05:10:09,726 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=65.2 pTM=0.448 ipTM=0.228 tol=7.08
2024-07-11 05:12:32,578 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=65.3 pTM=0.452 ipTM=0.225 tol=5.66
2024-07-11 05:14:55,463 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=65.2 pTM=0.448 ipTM=0.223 tol=4.21
2024-07-11 05:17:18,392 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=65.2 pTM=0.448 ipTM=0.221 tol=4.37
2024-07-11 05:19:41,300 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=65.5 pTM=0.449 ipTM=0.218 tol=5.74
2024-07-11 05:22:04,217 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=65.4 pTM=0.448 ipTM=0.217 tol=4.4
2024-07-11 05:24:27,149 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=65.5 pTM=0.447 ipTM=0.203 tol=4.61
2024-07-11 05:26:50,102 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=65.2 pTM=0.445 ipTM=0.211 tol=3.86
2024-07-11 05:29:13,079 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=65.2 pTM=0.443 ipTM=0.199 tol=5.13
2024-07-11 05:31:36,028 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=65 pTM=0.445 ipTM=0.216 tol=8.66
2024-07-11 05:33:59,002 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=64.9 pTM=0.45 ipTM=0.247 tol=6.86
2024-07-11 05:36:21,928 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=65.4 pTM=0.458 ipTM=0.282 tol=8.45
2024-07-11 05:38:44,822 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=65.8 pTM=0.468 ipTM=0.319 tol=4.12
2024-07-11 05:41:07,706 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=65.6 pTM=0.467 ipTM=0.322 tol=3.77
2024-07-11 05:43:30,635 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=65.7 pTM=0.464 ipTM=0.303 tol=3.67
2024-07-11 05:45:53,525 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=65.6 pTM=0.465 ipTM=0.31 tol=2.13
2024-07-11 05:48:16,416 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=65.9 pTM=0.469 ipTM=0.325 tol=3.55
2024-07-11 05:50:39,307 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=65.4 pTM=0.47 ipTM=0.338 tol=2.14
2024-07-11 05:53:02,157 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=65.9 pTM=0.47 ipTM=0.326 tol=3.53
2024-07-11 05:55:24,992 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=65.7 pTM=0.478 ipTM=0.364 tol=2.83
2024-07-11 05:55:24,994 alphafold2_multimer_v3_model_5_seed_000 took 4429.7s (30 recycles)
2024-07-11 05:55:27,144 reranking models by 'multimer' metric
2024-07-11 05:55:31,317 Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
2024-07-11 06:01:06,665 Relaxation took 339.5s
2024-07-11 06:01:06,665 rank_001_alphafold2_multimer_v3_model_5_seed_000 pLDDT=65.7 pTM=0.478 ipTM=0.364
2024-07-11 06:07:49,037 Relaxation took 402.4s
2024-07-11 06:07:49,037 rank_002_alphafold2_multimer_v3_model_4_seed_000 pLDDT=66.8 pTM=0.467 ipTM=0.344
2024-07-11 06:13:49,932 Relaxation took 360.9s
2024-07-11 06:13:49,932 rank_003_alphafold2_multimer_v3_model_3_seed_000 pLDDT=65.6 pTM=0.463 ipTM=0.31
2024-07-11 06:18:51,707 Relaxation took 301.8s
2024-07-11 06:18:51,708 rank_004_alphafold2_multimer_v3_model_1_seed_000 pLDDT=65.8 pTM=0.441 ipTM=0.258
2024-07-11 06:25:58,906 Relaxation took 427.2s
2024-07-11 06:25:58,906 rank_005_alphafold2_multimer_v3_model_2_seed_000 pLDDT=66.9 pTM=0.447 ipTM=0.198
2024-07-11 06:26:03,659 Done