2024-07-11 00:21:04,885 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3)
2024-07-11 00:21:05,391 Running on GPU
2024-07-11 00:21:09,271 Found 6 citations for tools or databases
2024-07-11 00:21:09,271 Query 1/1: KIF1A_ATG9A (length 2529)
2024-07-11 00:21:09,741 Sleeping for 9s. Reason: PENDING
2024-07-11 00:21:19,156 Sleeping for 8s. Reason: RUNNING
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2024-07-11 00:26:32,782 Sleeping for 5s. Reason: PENDING
2024-07-11 00:26:38,208 Sleeping for 6s. Reason: RUNNING
2024-07-11 00:26:44,634 Sleeping for 8s. Reason: RUNNING
2024-07-11 00:26:53,052 Sleeping for 6s. Reason: RUNNING
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2024-07-11 00:27:05,910 Sleeping for 8s. Reason: RUNNING
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2024-07-11 00:28:08,593 Sleeping for 5s. Reason: RUNNING
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2024-07-11 00:29:02,016 Sleeping for 8s. Reason: RUNNING
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2024-07-11 00:29:28,866 Sleeping for 6s. Reason: RUNNING
2024-07-11 00:29:36,302 Sleeping for 6s. Reason: RUNNING
2024-07-11 00:29:42,723 Sleeping for 6s. Reason: RUNNING
2024-07-11 00:29:49,140 Sleeping for 5s. Reason: RUNNING
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2024-07-11 00:30:33,719 Sleeping for 7s. Reason: RUNNING
2024-07-11 00:30:41,321 Sleeping for 5s. Reason: RUNNING
2024-07-11 00:30:46,734 Sleeping for 9s. Reason: RUNNING
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2024-07-11 00:31:02,098 Sleeping for 7s. Reason: RUNNING
2024-07-11 00:31:23,638 Setting max_seq=508, max_extra_seq=2048
2024-07-11 00:39:55,175 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=59 pTM=0.353 ipTM=0.222
2024-07-11 00:45:10,758 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=60.5 pTM=0.378 ipTM=0.226 tol=12.9
2024-07-11 00:50:26,302 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=60.2 pTM=0.379 ipTM=0.249 tol=9.1
2024-07-11 00:55:41,831 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=60.4 pTM=0.384 ipTM=0.27 tol=5.44
2024-07-11 01:00:57,245 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=60.3 pTM=0.385 ipTM=0.255 tol=4.97
2024-07-11 01:06:12,627 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=60.2 pTM=0.387 ipTM=0.257 tol=4.9
2024-07-11 01:11:27,969 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=60.4 pTM=0.389 ipTM=0.273 tol=5.01
2024-07-11 01:16:43,239 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=60.6 pTM=0.391 ipTM=0.275 tol=3.08
2024-07-11 01:21:58,447 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=60.2 pTM=0.392 ipTM=0.275 tol=2.42
2024-07-11 01:27:13,688 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=60 pTM=0.389 ipTM=0.271 tol=1.79
2024-07-11 01:32:28,935 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=59.9 pTM=0.387 ipTM=0.276 tol=2.66
2024-07-11 01:37:44,242 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=60 pTM=0.389 ipTM=0.277 tol=1.71
2024-07-11 01:42:59,599 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=60.2 pTM=0.386 ipTM=0.277 tol=1.49
2024-07-11 01:48:15,024 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=60.2 pTM=0.388 ipTM=0.281 tol=2.18
2024-07-11 01:53:30,411 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=60.2 pTM=0.389 ipTM=0.271 tol=2.96
2024-07-11 01:58:45,771 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=60.2 pTM=0.388 ipTM=0.277 tol=1.78
2024-07-11 02:04:01,036 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=60.1 pTM=0.389 ipTM=0.276 tol=1.84
2024-07-11 02:09:16,321 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=60.3 pTM=0.389 ipTM=0.282 tol=3.3
2024-07-11 02:14:31,422 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=60.2 pTM=0.387 ipTM=0.271 tol=2.59
2024-07-11 02:19:46,687 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=60.2 pTM=0.386 ipTM=0.276 tol=1.21
2024-07-11 02:25:02,027 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=60 pTM=0.385 ipTM=0.279 tol=2.27
2024-07-11 02:30:17,354 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=59.8 pTM=0.387 ipTM=0.285 tol=2.9
2024-07-11 02:35:32,576 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=60.2 pTM=0.386 ipTM=0.288 tol=2.68
2024-07-11 02:40:47,847 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=60.4 pTM=0.386 ipTM=0.288 tol=3.95
2024-07-11 02:46:03,320 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=60.3 pTM=0.385 ipTM=0.285 tol=4.05
2024-07-11 02:51:18,656 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=60.2 pTM=0.387 ipTM=0.281 tol=3.26
2024-07-11 02:56:34,013 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=60.2 pTM=0.388 ipTM=0.28 tol=2.81
2024-07-11 03:01:49,443 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=60 pTM=0.385 ipTM=0.282 tol=4.66
2024-07-11 03:07:04,809 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=59.8 pTM=0.386 ipTM=0.273 tol=4.64
2024-07-11 03:12:20,146 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=60 pTM=0.384 ipTM=0.278 tol=3.54
2024-07-11 03:17:35,375 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=59.9 pTM=0.386 ipTM=0.282 tol=3.29
2024-07-11 03:17:35,379 alphafold2_multimer_v3_model_1_seed_000 took 9968.2s (30 recycles)
2024-07-11 03:22:54,324 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=57.9 pTM=0.371 ipTM=0.232
2024-07-11 03:28:09,870 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=60.3 pTM=0.373 ipTM=0.232 tol=13.3
2024-07-11 03:33:25,523 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=60.4 pTM=0.381 ipTM=0.232 tol=8.76
2024-07-11 03:38:41,168 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=59.8 pTM=0.382 ipTM=0.235 tol=9.81
2024-07-11 03:43:56,656 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=60.6 pTM=0.381 ipTM=0.227 tol=10.1
2024-07-11 03:49:12,308 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=60.8 pTM=0.383 ipTM=0.222 tol=5.94
2024-07-11 03:54:27,731 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=61.2 pTM=0.385 ipTM=0.224 tol=4.3
2024-07-11 03:59:43,091 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=61.4 pTM=0.386 ipTM=0.224 tol=4.59
2024-07-11 04:04:58,447 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=61.5 pTM=0.385 ipTM=0.224 tol=3.81
2024-07-11 04:10:14,013 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=61.7 pTM=0.382 ipTM=0.221 tol=3.98
2024-07-11 04:15:29,570 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=61.6 pTM=0.381 ipTM=0.222 tol=3.4
2024-07-11 04:20:45,018 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=61.8 pTM=0.383 ipTM=0.22 tol=4.54
2024-07-11 04:26:00,461 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=61.8 pTM=0.381 ipTM=0.219 tol=5.31
2024-07-11 04:31:16,017 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=61.9 pTM=0.383 ipTM=0.219 tol=3.99
2024-07-11 04:36:31,676 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=62 pTM=0.381 ipTM=0.217 tol=2.36
2024-07-11 04:41:47,242 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=62.1 pTM=0.382 ipTM=0.217 tol=3.82
2024-07-11 04:47:02,950 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=62.1 pTM=0.38 ipTM=0.218 tol=3.12
2024-07-11 04:52:18,505 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=62.2 pTM=0.381 ipTM=0.219 tol=3.2
2024-07-11 04:57:33,986 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=62.2 pTM=0.381 ipTM=0.22 tol=2.06
2024-07-11 05:02:49,532 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=62 pTM=0.381 ipTM=0.221 tol=2.05
2024-07-11 05:08:05,000 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=61.8 pTM=0.381 ipTM=0.222 tol=1.73
2024-07-11 05:13:20,414 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=61.9 pTM=0.38 ipTM=0.221 tol=1.38
2024-07-11 05:18:35,889 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=62.1 pTM=0.381 ipTM=0.222 tol=1.46
2024-07-11 05:23:51,463 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=62.3 pTM=0.38 ipTM=0.22 tol=1.89
2024-07-11 05:29:07,098 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=62 pTM=0.381 ipTM=0.22 tol=1.68
2024-07-11 05:34:22,630 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=62.2 pTM=0.379 ipTM=0.219 tol=2.93
2024-07-11 05:39:38,114 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=62.1 pTM=0.379 ipTM=0.219 tol=2.93
2024-07-11 05:44:53,714 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=62.2 pTM=0.378 ipTM=0.218 tol=2.68
2024-07-11 05:50:09,381 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=62.1 pTM=0.379 ipTM=0.218 tol=2.82
2024-07-11 05:55:25,099 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=62.2 pTM=0.378 ipTM=0.217 tol=4.39
2024-07-11 06:00:40,857 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=61.9 pTM=0.379 ipTM=0.217 tol=5.11
2024-07-11 06:00:40,860 alphafold2_multimer_v3_model_2_seed_000 took 9781.9s (30 recycles)
2024-07-11 06:06:00,538 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=60.9 pTM=0.376 ipTM=0.211
2024-07-11 06:11:16,469 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=62.7 pTM=0.373 ipTM=0.215 tol=15.2
2024-07-11 06:16:32,181 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=62.9 pTM=0.375 ipTM=0.26 tol=8.92
2024-07-11 06:21:47,706 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=63.4 pTM=0.38 ipTM=0.252 tol=5.61
2024-07-11 06:27:03,362 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=63.2 pTM=0.382 ipTM=0.246 tol=4.47
2024-07-11 06:32:18,905 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=63.4 pTM=0.388 ipTM=0.284 tol=5.33
2024-07-11 06:37:34,226 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=64.1 pTM=0.401 ipTM=0.304 tol=3.63
2024-07-11 06:42:49,632 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=64.3 pTM=0.398 ipTM=0.302 tol=2.1
2024-07-11 06:48:05,241 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=63.9 pTM=0.393 ipTM=0.288 tol=2.75
2024-07-11 06:53:20,685 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=64.2 pTM=0.399 ipTM=0.301 tol=2.01
2024-07-11 06:58:36,137 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=63.8 pTM=0.393 ipTM=0.29 tol=2.66
2024-07-11 07:03:51,491 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=64.2 pTM=0.402 ipTM=0.301 tol=2.96
2024-07-11 07:09:06,894 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=64.2 pTM=0.396 ipTM=0.298 tol=2.79
2024-07-11 07:14:22,058 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=64.3 pTM=0.399 ipTM=0.296 tol=2.37
2024-07-11 07:19:37,163 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=64.3 pTM=0.399 ipTM=0.304 tol=2.21
2024-07-11 07:24:52,463 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=63.9 pTM=0.394 ipTM=0.288 tol=2.37
2024-07-11 07:30:07,686 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=64.3 pTM=0.403 ipTM=0.302 tol=2
2024-07-11 07:35:23,024 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=64.1 pTM=0.399 ipTM=0.293 tol=1.9
2024-07-11 07:40:38,340 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=64.2 pTM=0.402 ipTM=0.301 tol=1.27
2024-07-11 07:45:53,750 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=63.9 pTM=0.396 ipTM=0.291 tol=1.96
2024-07-11 07:51:09,020 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=64.2 pTM=0.409 ipTM=0.319 tol=1.93
2024-07-11 07:56:24,182 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=63.9 pTM=0.4 ipTM=0.289 tol=1.86
2024-07-11 08:01:39,298 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=64.1 pTM=0.401 ipTM=0.304 tol=1.68
2024-07-11 08:06:54,419 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=64.3 pTM=0.403 ipTM=0.303 tol=1.46
2024-07-11 08:12:09,621 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=63.8 pTM=0.397 ipTM=0.281 tol=1.83
2024-07-11 08:17:24,843 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=64.1 pTM=0.406 ipTM=0.306 tol=1.51
2024-07-11 08:22:40,202 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=63.8 pTM=0.398 ipTM=0.284 tol=1.27
2024-07-11 08:27:55,407 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=64.1 pTM=0.408 ipTM=0.314 tol=1.56
2024-07-11 08:33:10,795 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=63.9 pTM=0.399 ipTM=0.29 tol=1.86
2024-07-11 08:38:25,988 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=64.3 pTM=0.414 ipTM=0.336 tol=2.78
2024-07-11 08:43:41,176 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=64.1 pTM=0.408 ipTM=0.309 tol=2.78
2024-07-11 08:43:41,179 alphafold2_multimer_v3_model_3_seed_000 took 9776.7s (30 recycles)
2024-07-11 08:49:01,299 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=58.8 pTM=0.367 ipTM=0.216
2024-07-11 08:54:17,594 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=61.3 pTM=0.378 ipTM=0.21 tol=14.3
2024-07-11 08:59:33,637 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=61.5 pTM=0.384 ipTM=0.219 tol=10.3
2024-07-11 09:04:49,895 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=59.4 pTM=0.392 ipTM=0.235 tol=13.1
2024-07-11 09:10:06,611 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=61.8 pTM=0.389 ipTM=0.223 tol=19.1
2024-07-11 09:15:23,046 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=62.3 pTM=0.398 ipTM=0.239 tol=14.5
2024-07-11 09:20:39,312 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=62.4 pTM=0.403 ipTM=0.25 tol=5.07
2024-07-11 09:25:55,564 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=62.4 pTM=0.404 ipTM=0.25 tol=2.81
2024-07-11 09:31:11,636 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=62.6 pTM=0.406 ipTM=0.25 tol=3.24
2024-07-11 09:36:27,830 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=62.3 pTM=0.404 ipTM=0.245 tol=2.22
2024-07-11 09:41:44,061 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=62.4 pTM=0.401 ipTM=0.247 tol=2.7
2024-07-11 09:47:00,268 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=62.5 pTM=0.406 ipTM=0.249 tol=2.53
2024-07-11 09:52:16,426 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=62.3 pTM=0.402 ipTM=0.244 tol=3.65
2024-07-11 09:57:32,535 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=62.4 pTM=0.406 ipTM=0.248 tol=2.64
2024-07-11 10:02:48,633 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=62.2 pTM=0.404 ipTM=0.249 tol=2.42
2024-07-11 10:08:04,773 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=62.4 pTM=0.405 ipTM=0.25 tol=3.06
2024-07-11 10:13:20,871 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=62.2 pTM=0.407 ipTM=0.249 tol=2.72
2024-07-11 10:18:36,829 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=62.2 pTM=0.407 ipTM=0.252 tol=3.2
2024-07-11 10:23:52,926 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=62.2 pTM=0.405 ipTM=0.25 tol=2.4
2024-07-11 10:29:08,888 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=62.1 pTM=0.406 ipTM=0.252 tol=3.46
2024-07-11 10:34:24,878 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=62 pTM=0.406 ipTM=0.25 tol=2.23
2024-07-11 10:39:40,830 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=61.7 pTM=0.407 ipTM=0.25 tol=3.69
2024-07-11 10:44:56,875 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=62.4 pTM=0.405 ipTM=0.249 tol=2.3
2024-07-11 10:50:12,826 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=62.2 pTM=0.406 ipTM=0.251 tol=3.9
2024-07-11 10:55:28,734 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=61.9 pTM=0.408 ipTM=0.25 tol=2.38
2024-07-11 11:00:44,693 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=61.7 pTM=0.408 ipTM=0.253 tol=3.41
2024-07-11 11:06:00,719 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=62 pTM=0.406 ipTM=0.25 tol=3.14
2024-07-11 11:11:16,689 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=61.8 pTM=0.407 ipTM=0.248 tol=2.17
2024-07-11 11:16:32,640 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=62 pTM=0.406 ipTM=0.247 tol=2.26
2024-07-11 11:21:48,778 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=62.2 pTM=0.406 ipTM=0.245 tol=2.36
2024-07-11 11:27:04,669 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=61.8 pTM=0.406 ipTM=0.247 tol=4.42
2024-07-11 11:27:04,672 alphafold2_multimer_v3_model_4_seed_000 took 9799.8s (30 recycles)
2024-07-11 11:32:24,404 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=58.7 pTM=0.368 ipTM=0.211
2024-07-11 11:37:40,347 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=60.9 pTM=0.376 ipTM=0.213 tol=8.82
2024-07-11 11:42:56,157 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=61.2 pTM=0.377 ipTM=0.225 tol=9.06
2024-07-11 11:48:11,809 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=61.7 pTM=0.382 ipTM=0.219 tol=5.01
2024-07-11 11:53:27,464 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=61.5 pTM=0.38 ipTM=0.222 tol=5.4
2024-07-11 11:58:43,034 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=61.6 pTM=0.381 ipTM=0.225 tol=3.78
2024-07-11 12:03:58,531 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=61.9 pTM=0.383 ipTM=0.276 tol=6.23
2024-07-11 12:09:14,017 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=62.2 pTM=0.386 ipTM=0.303 tol=3.9
2024-07-11 12:14:29,515 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=62 pTM=0.387 ipTM=0.301 tol=4.07
2024-07-11 12:19:44,992 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=62.1 pTM=0.389 ipTM=0.303 tol=3.77
2024-07-11 12:25:00,432 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=62 pTM=0.394 ipTM=0.309 tol=3.68
2024-07-11 12:30:15,868 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=62 pTM=0.398 ipTM=0.302 tol=3.17
2024-07-11 12:35:31,217 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=62.2 pTM=0.406 ipTM=0.31 tol=4.07
2024-07-11 12:40:46,574 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=62.1 pTM=0.403 ipTM=0.312 tol=2.93
2024-07-11 12:46:01,875 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=62.2 pTM=0.403 ipTM=0.31 tol=2.48
2024-07-11 12:51:17,271 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=62.2 pTM=0.408 ipTM=0.316 tol=3.71
2024-07-11 12:56:32,618 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=62.2 pTM=0.404 ipTM=0.31 tol=2.7
2024-07-11 13:01:47,960 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=62.4 pTM=0.411 ipTM=0.317 tol=2.05
2024-07-11 13:07:03,358 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=62.3 pTM=0.404 ipTM=0.316 tol=2.41
2024-07-11 13:12:18,701 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=62.3 pTM=0.405 ipTM=0.32 tol=2.22
2024-07-11 13:17:34,066 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=62.2 pTM=0.404 ipTM=0.315 tol=1.75
2024-07-11 13:22:49,436 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=62.2 pTM=0.406 ipTM=0.319 tol=2.03
2024-07-11 13:28:04,828 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=62.2 pTM=0.401 ipTM=0.313 tol=2.41
2024-07-11 13:33:20,157 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=62.5 pTM=0.406 ipTM=0.321 tol=2.5
2024-07-11 13:38:35,522 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=62.2 pTM=0.402 ipTM=0.312 tol=2.12
2024-07-11 13:43:50,855 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=62.2 pTM=0.403 ipTM=0.318 tol=2.18
2024-07-11 13:49:06,232 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=62.2 pTM=0.404 ipTM=0.311 tol=3.1
2024-07-11 13:54:21,575 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=62.2 pTM=0.406 ipTM=0.315 tol=3.26
2024-07-11 13:59:36,865 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=62.2 pTM=0.406 ipTM=0.312 tol=2.18
2024-07-11 14:04:52,202 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=62.2 pTM=0.407 ipTM=0.312 tol=1.87
2024-07-11 14:10:07,589 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=62.2 pTM=0.406 ipTM=0.317 tol=2.65
2024-07-11 14:10:07,592 alphafold2_multimer_v3_model_5_seed_000 took 9779.3s (30 recycles)
2024-07-11 14:10:11,229 reranking models by 'multimer' metric
2024-07-11 14:10:19,734 Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
2024-07-11 14:21:25,761 Relaxation took 674.5s
2024-07-11 14:21:25,761 rank_001_alphafold2_multimer_v3_model_5_seed_000 pLDDT=62.2 pTM=0.406 ipTM=0.317
2024-07-11 14:27:37,966 Relaxation took 372.2s
2024-07-11 14:27:37,966 rank_002_alphafold2_multimer_v3_model_3_seed_000 pLDDT=64.1 pTM=0.408 ipTM=0.309
2024-07-11 14:39:08,570 Relaxation took 690.6s
2024-07-11 14:39:08,570 rank_003_alphafold2_multimer_v3_model_1_seed_000 pLDDT=59.9 pTM=0.386 ipTM=0.282
2024-07-11 14:47:00,410 Relaxation took 471.8s
2024-07-11 14:47:00,410 rank_004_alphafold2_multimer_v3_model_4_seed_000 pLDDT=61.8 pTM=0.406 ipTM=0.247
2024-07-11 14:58:51,983 Relaxation took 711.6s
2024-07-11 14:58:51,983 rank_005_alphafold2_multimer_v3_model_2_seed_000 pLDDT=61.9 pTM=0.379 ipTM=0.217
2024-07-11 14:59:11,150 Done