2024-07-11 00:45:55,274 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3)
2024-07-11 00:45:55,593 Running on GPU
2024-07-11 00:45:59,107 Found 6 citations for tools or databases
2024-07-11 00:45:59,107 Query 1/1: KLH28_CMGA (length 1028)
2024-07-11 00:45:59,555 Sleeping for 6s. Reason: PENDING
2024-07-11 00:46:05,961 Sleeping for 6s. Reason: RUNNING
2024-07-11 00:46:12,372 Sleeping for 7s. Reason: RUNNING
2024-07-11 00:46:20,272 Sleeping for 7s. Reason: RUNNING
2024-07-11 00:46:27,686 Sleeping for 6s. Reason: RUNNING
2024-07-11 00:46:34,127 Sleeping for 5s. Reason: RUNNING
2024-07-11 00:46:39,540 Sleeping for 10s. Reason: RUNNING
2024-07-11 00:46:50,001 Sleeping for 9s. Reason: RUNNING
2024-07-11 00:46:59,427 Sleeping for 7s. Reason: RUNNING
2024-07-11 00:47:06,842 Sleeping for 6s. Reason: RUNNING
2024-07-11 00:47:13,275 Sleeping for 10s. Reason: RUNNING
2024-07-11 00:47:23,729 Sleeping for 8s. Reason: RUNNING
2024-07-11 00:47:32,146 Sleeping for 5s. Reason: RUNNING
2024-07-11 00:47:38,031 Sleeping for 6s. Reason: RUNNING
2024-07-11 00:47:44,442 Sleeping for 8s. Reason: RUNNING
2024-07-11 00:47:52,854 Sleeping for 7s. Reason: RUNNING
2024-07-11 00:48:00,263 Sleeping for 9s. Reason: RUNNING
2024-07-11 00:48:28,084 Sleeping for 10s. Reason: PENDING
2024-07-11 00:48:38,505 Sleeping for 8s. Reason: RUNNING
2024-07-11 00:48:46,921 Sleeping for 7s. Reason: RUNNING
2024-07-11 00:48:54,361 Sleeping for 7s. Reason: RUNNING
2024-07-11 00:49:01,783 Sleeping for 8s. Reason: RUNNING
2024-07-11 00:49:10,220 Sleeping for 6s. Reason: RUNNING
2024-07-11 00:49:16,635 Sleeping for 10s. Reason: RUNNING
2024-07-11 00:49:27,073 Sleeping for 8s. Reason: RUNNING
2024-07-11 00:49:35,495 Sleeping for 8s. Reason: RUNNING
2024-07-11 00:49:43,904 Sleeping for 6s. Reason: RUNNING
2024-07-11 00:49:56,338 Timeout while fetching result from MSA server. Retrying...
2024-07-11 00:49:59,595 Setting max_seq=508, max_extra_seq=2048
2024-07-11 00:52:30,439 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=60.3 pTM=0.565 ipTM=0.277
2024-07-11 00:52:53,292 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=59.3 pTM=0.554 ipTM=0.261 tol=12.2
2024-07-11 00:53:16,286 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=60.3 pTM=0.556 ipTM=0.204 tol=5.95
2024-07-11 00:53:39,358 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=60.2 pTM=0.549 ipTM=0.207 tol=2.42
2024-07-11 00:54:02,469 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=60.6 pTM=0.546 ipTM=0.218 tol=4.89
2024-07-11 00:54:25,636 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=60.3 pTM=0.543 ipTM=0.218 tol=7.27
2024-07-11 00:54:48,877 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=60.1 pTM=0.543 ipTM=0.209 tol=9.02
2024-07-11 00:55:12,124 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=59.8 pTM=0.539 ipTM=0.198 tol=11
2024-07-11 00:55:35,370 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=59.8 pTM=0.54 ipTM=0.193 tol=5.07
2024-07-11 00:55:58,613 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=60.6 pTM=0.542 ipTM=0.203 tol=3.7
2024-07-11 00:56:21,883 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=60.2 pTM=0.538 ipTM=0.198 tol=2.49
2024-07-11 00:56:45,140 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=60.1 pTM=0.538 ipTM=0.195 tol=7.97
2024-07-11 00:57:08,407 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=60 pTM=0.537 ipTM=0.199 tol=6.73
2024-07-11 00:57:31,683 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=60 pTM=0.537 ipTM=0.191 tol=4.69
2024-07-11 00:57:54,961 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=60.2 pTM=0.536 ipTM=0.2 tol=3.59
2024-07-11 00:58:18,245 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=60.1 pTM=0.532 ipTM=0.202 tol=2.65
2024-07-11 00:58:41,554 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=60.4 pTM=0.533 ipTM=0.204 tol=2.67
2024-07-11 00:59:04,844 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=60.4 pTM=0.536 ipTM=0.199 tol=3.58
2024-07-11 00:59:28,124 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=60.4 pTM=0.533 ipTM=0.205 tol=4.38
2024-07-11 00:59:51,445 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=60.3 pTM=0.536 ipTM=0.196 tol=7.11
2024-07-11 01:00:14,755 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=59.8 pTM=0.533 ipTM=0.195 tol=5.87
2024-07-11 01:00:38,054 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=59.4 pTM=0.536 ipTM=0.195 tol=7.28
2024-07-11 01:01:01,330 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=59.5 pTM=0.534 ipTM=0.199 tol=4.35
2024-07-11 01:01:24,616 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=60 pTM=0.538 ipTM=0.196 tol=3.34
2024-07-11 01:01:47,954 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=60 pTM=0.534 ipTM=0.192 tol=4.07
2024-07-11 01:02:11,250 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=60.3 pTM=0.533 ipTM=0.191 tol=6.07
2024-07-11 01:02:34,540 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=60.2 pTM=0.534 ipTM=0.189 tol=9.06
2024-07-11 01:02:57,826 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=60.1 pTM=0.536 ipTM=0.195 tol=5.12
2024-07-11 01:03:21,132 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=60.2 pTM=0.531 ipTM=0.194 tol=4.01
2024-07-11 01:03:44,421 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=60.2 pTM=0.532 ipTM=0.187 tol=4.6
2024-07-11 01:04:07,716 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=60.4 pTM=0.532 ipTM=0.2 tol=5.41
2024-07-11 01:04:07,717 alphafold2_multimer_v3_model_1_seed_000 took 843.0s (30 recycles)
2024-07-11 01:04:31,723 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=60.1 pTM=0.544 ipTM=0.255
2024-07-11 01:04:55,045 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=60.9 pTM=0.55 ipTM=0.215 tol=15.1
2024-07-11 01:05:18,426 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=61.3 pTM=0.556 ipTM=0.298 tol=11.2
2024-07-11 01:05:41,760 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=61.5 pTM=0.551 ipTM=0.266 tol=8.43
2024-07-11 01:06:05,109 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=61.5 pTM=0.55 ipTM=0.234 tol=6.91
2024-07-11 01:06:28,476 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=61.8 pTM=0.554 ipTM=0.269 tol=4.11
2024-07-11 01:06:51,813 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=61.8 pTM=0.554 ipTM=0.276 tol=6.14
2024-07-11 01:07:15,140 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=62 pTM=0.552 ipTM=0.293 tol=7.48
2024-07-11 01:07:38,493 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=62.3 pTM=0.554 ipTM=0.285 tol=7.52
2024-07-11 01:08:01,846 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=62.7 pTM=0.559 ipTM=0.291 tol=4.6
2024-07-11 01:08:25,182 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=62.2 pTM=0.553 ipTM=0.277 tol=4.86
2024-07-11 01:08:48,516 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=62.3 pTM=0.555 ipTM=0.253 tol=6.75
2024-07-11 01:09:11,856 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=62.4 pTM=0.555 ipTM=0.258 tol=4.62
2024-07-11 01:09:35,198 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=62.6 pTM=0.558 ipTM=0.283 tol=6.42
2024-07-11 01:09:58,539 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=62.6 pTM=0.558 ipTM=0.279 tol=9.12
2024-07-11 01:10:21,882 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=62.6 pTM=0.558 ipTM=0.28 tol=4.96
2024-07-11 01:10:45,211 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=62.4 pTM=0.558 ipTM=0.282 tol=6.34
2024-07-11 01:11:08,544 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=62.6 pTM=0.56 ipTM=0.292 tol=3.72
2024-07-11 01:11:31,873 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=62.5 pTM=0.558 ipTM=0.279 tol=5.51
2024-07-11 01:11:55,227 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=62.7 pTM=0.557 ipTM=0.273 tol=7.66
2024-07-11 01:12:18,574 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=62.4 pTM=0.555 ipTM=0.309 tol=7.2
2024-07-11 01:12:41,935 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=62.6 pTM=0.557 ipTM=0.289 tol=7.82
2024-07-11 01:13:05,279 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=62.6 pTM=0.555 ipTM=0.258 tol=5.08
2024-07-11 01:13:28,613 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=62.5 pTM=0.559 ipTM=0.271 tol=3.71
2024-07-11 01:13:51,946 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=62.5 pTM=0.558 ipTM=0.268 tol=3.56
2024-07-11 01:14:15,272 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=62.5 pTM=0.557 ipTM=0.255 tol=5
2024-07-11 01:14:38,585 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=62.8 pTM=0.559 ipTM=0.241 tol=5.32
2024-07-11 01:15:01,877 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=63.1 pTM=0.561 ipTM=0.251 tol=4.98
2024-07-11 01:15:25,122 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=63.2 pTM=0.56 ipTM=0.265 tol=5.36
2024-07-11 01:15:48,393 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=63.3 pTM=0.563 ipTM=0.275 tol=3.96
2024-07-11 01:16:11,655 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=63.5 pTM=0.563 ipTM=0.268 tol=2.59
2024-07-11 01:16:11,656 alphafold2_multimer_v3_model_2_seed_000 took 723.3s (30 recycles)
2024-07-11 01:16:35,687 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=60.4 pTM=0.55 ipTM=0.269
2024-07-11 01:16:59,004 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=60.6 pTM=0.553 ipTM=0.214 tol=15.1
2024-07-11 01:17:22,343 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=60.8 pTM=0.561 ipTM=0.213 tol=9.77
2024-07-11 01:17:45,712 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=60.9 pTM=0.553 ipTM=0.204 tol=6.59
2024-07-11 01:18:09,089 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=60.8 pTM=0.552 ipTM=0.208 tol=6.91
2024-07-11 01:18:32,462 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=61 pTM=0.551 ipTM=0.214 tol=6.29
2024-07-11 01:18:55,851 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=61.1 pTM=0.554 ipTM=0.202 tol=4.31
2024-07-11 01:19:19,254 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=61.2 pTM=0.549 ipTM=0.212 tol=5.89
2024-07-11 01:19:42,642 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=61.2 pTM=0.546 ipTM=0.203 tol=10.7
2024-07-11 01:20:06,042 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=61.4 pTM=0.551 ipTM=0.21 tol=11.5
2024-07-11 01:20:29,421 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=61 pTM=0.55 ipTM=0.203 tol=6.44
2024-07-11 01:20:52,807 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=61.3 pTM=0.557 ipTM=0.208 tol=8.2
2024-07-11 01:21:16,193 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=61.2 pTM=0.554 ipTM=0.198 tol=3.14
2024-07-11 01:21:39,571 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=61.2 pTM=0.559 ipTM=0.208 tol=3.74
2024-07-11 01:22:02,949 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=61.4 pTM=0.558 ipTM=0.206 tol=3.09
2024-07-11 01:22:26,343 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=61.3 pTM=0.559 ipTM=0.215 tol=5.45
2024-07-11 01:22:49,715 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=61.3 pTM=0.561 ipTM=0.345 tol=4.32
2024-07-11 01:23:13,065 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=61.4 pTM=0.56 ipTM=0.241 tol=4.17
2024-07-11 01:23:36,417 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=61.3 pTM=0.556 ipTM=0.229 tol=3.47
2024-07-11 01:23:59,804 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=61.6 pTM=0.563 ipTM=0.21 tol=1.53
2024-07-11 01:24:23,166 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=61.5 pTM=0.559 ipTM=0.199 tol=1.83
2024-07-11 01:24:46,523 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=61.6 pTM=0.561 ipTM=0.21 tol=4.05
2024-07-11 01:25:09,870 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=61.5 pTM=0.56 ipTM=0.206 tol=2.16
2024-07-11 01:25:33,221 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=61.9 pTM=0.563 ipTM=0.21 tol=2.75
2024-07-11 01:25:56,566 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=61.8 pTM=0.562 ipTM=0.211 tol=3.6
2024-07-11 01:26:19,928 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=61.9 pTM=0.564 ipTM=0.202 tol=1.99
2024-07-11 01:26:43,263 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=61.8 pTM=0.562 ipTM=0.21 tol=2.52
2024-07-11 01:27:06,610 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=61.9 pTM=0.563 ipTM=0.203 tol=3.2
2024-07-11 01:27:29,962 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=61.9 pTM=0.562 ipTM=0.207 tol=3.02
2024-07-11 01:27:53,301 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=61.9 pTM=0.565 ipTM=0.201 tol=2.46
2024-07-11 01:28:16,581 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=62 pTM=0.566 ipTM=0.241 tol=3.37
2024-07-11 01:28:16,582 alphafold2_multimer_v3_model_3_seed_000 took 724.3s (30 recycles)
2024-07-11 01:28:40,629 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=59.3 pTM=0.556 ipTM=0.252
2024-07-11 01:29:03,906 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=59.3 pTM=0.537 ipTM=0.208 tol=15.2
2024-07-11 01:29:27,280 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=59.6 pTM=0.549 ipTM=0.205 tol=7.91
2024-07-11 01:29:50,671 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=59.7 pTM=0.543 ipTM=0.187 tol=9.55
2024-07-11 01:30:14,070 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=59.5 pTM=0.536 ipTM=0.195 tol=6.3
2024-07-11 01:30:37,514 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=59.6 pTM=0.541 ipTM=0.194 tol=4.75
2024-07-11 01:31:00,938 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=59.9 pTM=0.543 ipTM=0.195 tol=4.09
2024-07-11 01:31:24,376 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=59.8 pTM=0.541 ipTM=0.196 tol=3.13
2024-07-11 01:31:47,821 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=59.8 pTM=0.543 ipTM=0.19 tol=4.27
2024-07-11 01:32:11,254 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=59.6 pTM=0.542 ipTM=0.2 tol=4.83
2024-07-11 01:32:34,667 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=59.7 pTM=0.551 ipTM=0.191 tol=4.43
2024-07-11 01:32:58,134 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=59.6 pTM=0.552 ipTM=0.201 tol=15.7
2024-07-11 01:33:21,604 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=60.1 pTM=0.563 ipTM=0.191 tol=16.2
2024-07-11 01:33:44,973 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=59.9 pTM=0.567 ipTM=0.324 tol=15.5
2024-07-11 01:34:08,330 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=60.2 pTM=0.574 ipTM=0.424 tol=9.55
2024-07-11 01:34:31,688 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=60.4 pTM=0.569 ipTM=0.389 tol=5.12
2024-07-11 01:34:55,052 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=60.2 pTM=0.57 ipTM=0.348 tol=3.73
2024-07-11 01:35:18,426 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=60.5 pTM=0.57 ipTM=0.33 tol=7.84
2024-07-11 01:35:41,808 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=60.3 pTM=0.568 ipTM=0.311 tol=2.99
2024-07-11 01:36:05,224 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=60.4 pTM=0.57 ipTM=0.298 tol=2.39
2024-07-11 01:36:28,613 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=60.3 pTM=0.569 ipTM=0.289 tol=2.24
2024-07-11 01:36:52,026 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=60.3 pTM=0.568 ipTM=0.274 tol=1.96
2024-07-11 01:37:15,425 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=60.2 pTM=0.568 ipTM=0.241 tol=2.38
2024-07-11 01:37:38,794 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=60.2 pTM=0.568 ipTM=0.25 tol=2.63
2024-07-11 01:38:02,199 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=60.4 pTM=0.57 ipTM=0.264 tol=3.06
2024-07-11 01:38:25,627 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=60.3 pTM=0.569 ipTM=0.227 tol=3.45
2024-07-11 01:38:49,026 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=60.4 pTM=0.57 ipTM=0.192 tol=1.76
2024-07-11 01:39:12,440 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=60.6 pTM=0.571 ipTM=0.197 tol=2.47
2024-07-11 01:39:35,858 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=60.5 pTM=0.57 ipTM=0.192 tol=2.89
2024-07-11 01:39:59,265 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=60.6 pTM=0.568 ipTM=0.188 tol=1.88
2024-07-11 01:40:22,659 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=60.7 pTM=0.578 ipTM=0.382 tol=3.8
2024-07-11 01:40:22,660 alphafold2_multimer_v3_model_4_seed_000 took 725.4s (30 recycles)
2024-07-11 01:40:46,671 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=59.8 pTM=0.558 ipTM=0.482
2024-07-11 01:41:10,059 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=60.6 pTM=0.563 ipTM=0.248 tol=10.4
2024-07-11 01:41:33,495 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=61.2 pTM=0.574 ipTM=0.231 tol=5.82
2024-07-11 01:41:56,910 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=61 pTM=0.571 ipTM=0.303 tol=10.7
2024-07-11 01:42:20,334 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=61.1 pTM=0.567 ipTM=0.22 tol=7.99
2024-07-11 01:42:43,769 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=60.7 pTM=0.57 ipTM=0.199 tol=13.2
2024-07-11 01:43:07,217 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=61.1 pTM=0.568 ipTM=0.211 tol=6.43
2024-07-11 01:43:30,661 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=61.2 pTM=0.573 ipTM=0.207 tol=4.57
2024-07-11 01:43:54,087 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=61.1 pTM=0.582 ipTM=0.207 tol=7.16
2024-07-11 01:44:17,535 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=61.3 pTM=0.579 ipTM=0.207 tol=6.24
2024-07-11 01:44:40,951 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=61.2 pTM=0.58 ipTM=0.206 tol=3.48
2024-07-11 01:45:04,376 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=61.3 pTM=0.583 ipTM=0.214 tol=4.19
2024-07-11 01:45:27,825 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=61.2 pTM=0.583 ipTM=0.198 tol=3.84
2024-07-11 01:45:51,253 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=61.1 pTM=0.583 ipTM=0.228 tol=3.49
2024-07-11 01:46:14,690 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=61.3 pTM=0.583 ipTM=0.215 tol=3.62
2024-07-11 01:46:38,094 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=61.3 pTM=0.584 ipTM=0.233 tol=3.16
2024-07-11 01:47:01,542 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=61.2 pTM=0.581 ipTM=0.205 tol=3.43
2024-07-11 01:47:24,998 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=61.3 pTM=0.583 ipTM=0.245 tol=4.08
2024-07-11 01:47:48,452 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=61.2 pTM=0.581 ipTM=0.204 tol=3.29
2024-07-11 01:48:11,894 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=61.6 pTM=0.587 ipTM=0.246 tol=3.26
2024-07-11 01:48:35,343 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=61.3 pTM=0.582 ipTM=0.207 tol=4.72
2024-07-11 01:48:58,771 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=61.4 pTM=0.584 ipTM=0.226 tol=4.8
2024-07-11 01:49:22,229 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=61.3 pTM=0.582 ipTM=0.211 tol=4.5
2024-07-11 01:49:45,659 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=61.4 pTM=0.583 ipTM=0.216 tol=2.97
2024-07-11 01:50:09,110 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=61.2 pTM=0.581 ipTM=0.205 tol=3.21
2024-07-11 01:50:32,541 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=61.5 pTM=0.585 ipTM=0.231 tol=3.75
2024-07-11 01:50:55,984 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=61.3 pTM=0.583 ipTM=0.208 tol=4.43
2024-07-11 01:51:19,407 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=61.5 pTM=0.583 ipTM=0.234 tol=2.72
2024-07-11 01:51:42,825 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=61.3 pTM=0.581 ipTM=0.209 tol=5.38
2024-07-11 01:52:06,259 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=61.4 pTM=0.581 ipTM=0.216 tol=2.84
2024-07-11 01:52:29,703 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=61.3 pTM=0.582 ipTM=0.216 tol=3.17
2024-07-11 01:52:29,704 alphafold2_multimer_v3_model_5_seed_000 took 726.4s (30 recycles)
2024-07-11 01:52:30,345 reranking models by 'multimer' metric
2024-07-11 01:52:31,511 Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
2024-07-11 01:53:44,194 Relaxation took 73.8s
2024-07-11 01:53:44,195 rank_001_alphafold2_multimer_v3_model_4_seed_000 pLDDT=60.7 pTM=0.578 ipTM=0.382
2024-07-11 01:54:54,339 Relaxation took 70.1s
2024-07-11 01:54:54,339 rank_002_alphafold2_multimer_v3_model_2_seed_000 pLDDT=63.5 pTM=0.563 ipTM=0.268
2024-07-11 01:56:04,803 Relaxation took 70.5s
2024-07-11 01:56:04,803 rank_003_alphafold2_multimer_v3_model_3_seed_000 pLDDT=62 pTM=0.566 ipTM=0.241
2024-07-11 01:58:02,815 Relaxation took 118.0s
2024-07-11 01:58:02,816 rank_004_alphafold2_multimer_v3_model_5_seed_000 pLDDT=61.3 pTM=0.582 ipTM=0.216
2024-07-11 01:59:31,557 Relaxation took 88.7s
2024-07-11 01:59:31,557 rank_005_alphafold2_multimer_v3_model_1_seed_000 pLDDT=60.4 pTM=0.532 ipTM=0.2
2024-07-11 01:59:33,371 Done