2024-07-11 01:07:15,822 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3) 2024-07-11 01:07:16,162 Running on GPU 2024-07-11 01:07:19,679 Found 6 citations for tools or databases 2024-07-11 01:07:19,680 Query 1/1: KLHL3_RASF3 (length 825) 2024-07-11 01:07:20,132 Sleeping for 9s. Reason: PENDING 2024-07-11 01:07:29,564 Sleeping for 10s. Reason: RUNNING 2024-07-11 01:07:39,994 Sleeping for 8s. Reason: RUNNING 2024-07-11 01:07:48,409 Sleeping for 9s. Reason: RUNNING 2024-07-11 01:07:57,848 Sleeping for 5s. Reason: RUNNING 2024-07-11 01:08:03,282 Sleeping for 9s. Reason: RUNNING 2024-07-11 01:08:12,717 Sleeping for 9s. Reason: RUNNING 2024-07-11 01:08:22,150 Sleeping for 7s. Reason: RUNNING 2024-07-11 01:08:29,569 Sleeping for 6s. Reason: RUNNING 2024-07-11 01:08:36,005 Sleeping for 7s. Reason: RUNNING 2024-07-11 01:08:43,425 Sleeping for 6s. Reason: RUNNING 2024-07-11 01:08:50,187 Sleeping for 6s. Reason: RUNNING 2024-07-11 01:08:56,623 Sleeping for 9s. Reason: RUNNING 2024-07-11 01:09:06,063 Sleeping for 5s. Reason: RUNNING 2024-07-11 01:09:11,470 Sleeping for 5s. Reason: RUNNING 2024-07-11 01:09:16,881 Sleeping for 10s. Reason: RUNNING 2024-07-11 01:09:27,304 Sleeping for 7s. Reason: RUNNING 2024-07-11 01:09:34,722 Sleeping for 6s. Reason: RUNNING 2024-07-11 01:09:41,136 Sleeping for 9s. Reason: RUNNING 2024-07-11 01:10:06,320 Sleeping for 9s. Reason: PENDING 2024-07-11 01:10:15,741 Sleeping for 8s. Reason: RUNNING 2024-07-11 01:10:24,162 Sleeping for 9s. Reason: RUNNING 2024-07-11 01:10:33,582 Sleeping for 5s. Reason: RUNNING 2024-07-11 01:10:38,987 Sleeping for 8s. Reason: RUNNING 2024-07-11 01:10:47,434 Sleeping for 7s. Reason: RUNNING 2024-07-11 01:10:54,851 Sleeping for 6s. Reason: RUNNING 2024-07-11 01:11:01,271 Sleeping for 10s. Reason: RUNNING 2024-07-11 01:11:11,681 Sleeping for 5s. Reason: RUNNING 2024-07-11 01:11:17,084 Sleeping for 10s. Reason: RUNNING 2024-07-11 01:11:30,721 Setting max_seq=508, max_extra_seq=2048 2024-07-11 01:14:31,183 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=76.9 pTM=0.456 ipTM=0.202 2024-07-11 01:14:44,914 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=76.6 pTM=0.448 ipTM=0.196 tol=5.33 2024-07-11 01:14:58,665 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=77.5 pTM=0.465 ipTM=0.298 tol=3.63 2024-07-11 01:15:12,470 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=77.5 pTM=0.455 ipTM=0.212 tol=2.41 2024-07-11 01:15:26,294 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=77 pTM=0.454 ipTM=0.21 tol=1.91 2024-07-11 01:15:40,130 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=78 pTM=0.465 ipTM=0.292 tol=2.46 2024-07-11 01:15:54,004 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=77.5 pTM=0.457 ipTM=0.226 tol=1.57 2024-07-11 01:16:07,871 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=76.9 pTM=0.451 ipTM=0.2 tol=2.45 2024-07-11 01:16:21,781 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=76.8 pTM=0.45 ipTM=0.196 tol=2.12 2024-07-11 01:16:35,660 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=76.8 pTM=0.449 ipTM=0.193 tol=1.53 2024-07-11 01:16:49,570 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=76.7 pTM=0.45 ipTM=0.198 tol=2.42 2024-07-11 01:17:03,481 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=76.8 pTM=0.449 ipTM=0.196 tol=2.4 2024-07-11 01:17:17,400 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=76.7 pTM=0.447 ipTM=0.188 tol=2.3 2024-07-11 01:17:31,308 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=76.6 pTM=0.447 ipTM=0.192 tol=2.23 2024-07-11 01:17:45,230 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=76.9 pTM=0.45 ipTM=0.205 tol=2.46 2024-07-11 01:17:59,182 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=76.9 pTM=0.449 ipTM=0.193 tol=2.33 2024-07-11 01:18:13,118 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=76.8 pTM=0.448 ipTM=0.19 tol=1.82 2024-07-11 01:18:27,053 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=76.9 pTM=0.45 ipTM=0.193 tol=1.88 2024-07-11 01:18:40,996 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=76.8 pTM=0.448 ipTM=0.191 tol=1.97 2024-07-11 01:18:54,938 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=76.9 pTM=0.451 ipTM=0.195 tol=1.87 2024-07-11 01:19:08,870 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=76.8 pTM=0.449 ipTM=0.195 tol=1.94 2024-07-11 01:19:22,819 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=76.9 pTM=0.45 ipTM=0.193 tol=2.34 2024-07-11 01:19:36,766 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=76.9 pTM=0.45 ipTM=0.205 tol=1.68 2024-07-11 01:19:50,713 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=76.7 pTM=0.451 ipTM=0.196 tol=1.59 2024-07-11 01:20:04,639 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=76.7 pTM=0.448 ipTM=0.194 tol=1.41 2024-07-11 01:20:18,568 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=76.5 pTM=0.448 ipTM=0.194 tol=1.72 2024-07-11 01:20:32,505 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=76.6 pTM=0.447 ipTM=0.188 tol=1.45 2024-07-11 01:20:46,448 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=76.8 pTM=0.45 ipTM=0.19 tol=1.29 2024-07-11 01:21:00,388 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=76.7 pTM=0.448 ipTM=0.185 tol=1.54 2024-07-11 01:21:14,325 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=76.5 pTM=0.448 ipTM=0.193 tol=2.53 2024-07-11 01:21:28,244 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=76.2 pTM=0.446 ipTM=0.188 tol=2.43 2024-07-11 01:21:28,245 alphafold2_multimer_v3_model_1_seed_000 took 591.9s (30 recycles) 2024-07-11 01:21:42,568 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=78.7 pTM=0.47 ipTM=0.214 2024-07-11 01:21:56,506 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=78.6 pTM=0.457 ipTM=0.196 tol=4.27 2024-07-11 01:22:10,452 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=79.3 pTM=0.461 ipTM=0.207 tol=4.2 2024-07-11 01:22:24,384 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=79.1 pTM=0.457 ipTM=0.193 tol=2.9 2024-07-11 01:22:38,335 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=79.3 pTM=0.458 ipTM=0.197 tol=1.62 2024-07-11 01:22:52,264 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=79.1 pTM=0.458 ipTM=0.19 tol=1.79 2024-07-11 01:23:06,191 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=79.3 pTM=0.459 ipTM=0.197 tol=1.96 2024-07-11 01:23:20,133 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=79.1 pTM=0.456 ipTM=0.187 tol=2.06 2024-07-11 01:23:34,072 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=79.2 pTM=0.457 ipTM=0.195 tol=1.33 2024-07-11 01:23:48,021 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=79.1 pTM=0.456 ipTM=0.186 tol=1.78 2024-07-11 01:24:01,965 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=79.1 pTM=0.458 ipTM=0.2 tol=1.42 2024-07-11 01:24:15,904 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=78.9 pTM=0.455 ipTM=0.187 tol=1.4 2024-07-11 01:24:29,854 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=78.7 pTM=0.456 ipTM=0.199 tol=3.71 2024-07-11 01:24:43,797 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=79.1 pTM=0.456 ipTM=0.192 tol=3.42 2024-07-11 01:24:57,742 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=79.1 pTM=0.455 ipTM=0.193 tol=1.69 2024-07-11 01:25:11,693 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=79.1 pTM=0.454 ipTM=0.183 tol=2.5 2024-07-11 01:25:25,636 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=79.2 pTM=0.457 ipTM=0.194 tol=2.57 2024-07-11 01:25:39,557 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=79.1 pTM=0.456 ipTM=0.195 tol=1.93 2024-07-11 01:25:53,480 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=79.2 pTM=0.457 ipTM=0.193 tol=1.55 2024-07-11 01:26:07,415 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=79 pTM=0.456 ipTM=0.191 tol=3.85 2024-07-11 01:26:21,340 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=79.2 pTM=0.457 ipTM=0.195 tol=2.74 2024-07-11 01:26:35,272 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=78.9 pTM=0.455 ipTM=0.183 tol=1.35 2024-07-11 01:26:49,193 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=79.1 pTM=0.458 ipTM=0.19 tol=1.2 2024-07-11 01:27:03,107 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=78.9 pTM=0.456 ipTM=0.185 tol=1.3 2024-07-11 01:27:17,039 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=79.1 pTM=0.456 ipTM=0.196 tol=1.5 2024-07-11 01:27:30,971 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=78.7 pTM=0.454 ipTM=0.185 tol=3.87 2024-07-11 01:27:44,899 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=78.9 pTM=0.456 ipTM=0.187 tol=2.58 2024-07-11 01:27:58,824 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=78.9 pTM=0.456 ipTM=0.183 tol=1.51 2024-07-11 01:28:12,731 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=79.1 pTM=0.458 ipTM=0.195 tol=1.77 2024-07-11 01:28:26,642 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=78.8 pTM=0.455 ipTM=0.185 tol=1.65 2024-07-11 01:28:40,543 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=78.8 pTM=0.456 ipTM=0.192 tol=1.18 2024-07-11 01:28:40,544 alphafold2_multimer_v3_model_2_seed_000 took 431.9s (30 recycles) 2024-07-11 01:28:54,869 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=78.1 pTM=0.474 ipTM=0.243 2024-07-11 01:29:08,793 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=79.8 pTM=0.462 ipTM=0.206 tol=5.4 2024-07-11 01:29:22,694 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=79.6 pTM=0.467 ipTM=0.212 tol=2.78 2024-07-11 01:29:36,599 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=79.9 pTM=0.467 ipTM=0.209 tol=2.21 2024-07-11 01:29:50,513 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=80.2 pTM=0.469 ipTM=0.223 tol=1.73 2024-07-11 01:30:04,444 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=79.6 pTM=0.466 ipTM=0.201 tol=1.41 2024-07-11 01:30:18,382 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=80.2 pTM=0.469 ipTM=0.224 tol=1.06 2024-07-11 01:30:32,320 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=79.7 pTM=0.464 ipTM=0.203 tol=1.2 2024-07-11 01:30:46,237 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=79.8 pTM=0.465 ipTM=0.206 tol=0.88 2024-07-11 01:31:00,165 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=79.4 pTM=0.46 ipTM=0.196 tol=1.22 2024-07-11 01:31:14,090 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=79.4 pTM=0.461 ipTM=0.204 tol=0.903 2024-07-11 01:31:28,027 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=79.6 pTM=0.461 ipTM=0.204 tol=0.92 2024-07-11 01:31:41,961 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=79.5 pTM=0.462 ipTM=0.199 tol=0.754 2024-07-11 01:31:55,898 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=79.4 pTM=0.458 ipTM=0.195 tol=1.23 2024-07-11 01:32:09,804 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=79.4 pTM=0.462 ipTM=0.201 tol=1.3 2024-07-11 01:32:23,747 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=79.7 pTM=0.46 ipTM=0.199 tol=1.35 2024-07-11 01:32:37,680 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=79.4 pTM=0.463 ipTM=0.198 tol=1.6 2024-07-11 01:32:51,566 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=79.6 pTM=0.464 ipTM=0.213 tol=1.33 2024-07-11 01:33:05,480 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=79.6 pTM=0.462 ipTM=0.194 tol=0.936 2024-07-11 01:33:19,395 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=79.6 pTM=0.462 ipTM=0.206 tol=1.12 2024-07-11 01:33:33,306 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=79.6 pTM=0.461 ipTM=0.205 tol=1.03 2024-07-11 01:33:47,225 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=79.6 pTM=0.461 ipTM=0.204 tol=0.968 2024-07-11 01:34:01,146 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=79.5 pTM=0.463 ipTM=0.199 tol=1.27 2024-07-11 01:34:15,073 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=79.6 pTM=0.462 ipTM=0.21 tol=1.25 2024-07-11 01:34:28,994 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=79.3 pTM=0.461 ipTM=0.2 tol=1.08 2024-07-11 01:34:42,897 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=79.4 pTM=0.462 ipTM=0.207 tol=0.875 2024-07-11 01:34:56,815 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=79.3 pTM=0.461 ipTM=0.197 tol=1.08 2024-07-11 01:35:10,733 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=79.3 pTM=0.46 ipTM=0.198 tol=1.28 2024-07-11 01:35:24,637 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=79.4 pTM=0.463 ipTM=0.197 tol=1.38 2024-07-11 01:35:38,552 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=79.2 pTM=0.459 ipTM=0.2 tol=1.12 2024-07-11 01:35:52,481 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=79.4 pTM=0.463 ipTM=0.2 tol=1.27 2024-07-11 01:35:52,482 alphafold2_multimer_v3_model_3_seed_000 took 431.5s (30 recycles) 2024-07-11 01:36:06,863 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=77.9 pTM=0.465 ipTM=0.191 2024-07-11 01:36:20,804 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=77.7 pTM=0.467 ipTM=0.189 tol=10.1 2024-07-11 01:36:34,736 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=77.6 pTM=0.463 ipTM=0.181 tol=6.67 2024-07-11 01:36:48,667 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=77.6 pTM=0.465 ipTM=0.189 tol=3.02 2024-07-11 01:37:02,617 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=78 pTM=0.461 ipTM=0.179 tol=3.9 2024-07-11 01:37:16,547 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=77.9 pTM=0.463 ipTM=0.186 tol=2.13 2024-07-11 01:37:30,459 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=77.9 pTM=0.463 ipTM=0.187 tol=0.984 2024-07-11 01:37:44,388 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=77.7 pTM=0.461 ipTM=0.185 tol=1.71 2024-07-11 01:37:58,284 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=77.7 pTM=0.463 ipTM=0.187 tol=1.42 2024-07-11 01:38:12,223 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=77.9 pTM=0.462 ipTM=0.184 tol=1.44 2024-07-11 01:38:26,153 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=77.9 pTM=0.463 ipTM=0.186 tol=1.53 2024-07-11 01:38:40,065 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=77.9 pTM=0.46 ipTM=0.186 tol=1.11 2024-07-11 01:38:54,001 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=77.9 pTM=0.46 ipTM=0.185 tol=2.2 2024-07-11 01:39:07,931 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=77.7 pTM=0.457 ipTM=0.183 tol=2.46 2024-07-11 01:39:21,871 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=77.9 pTM=0.459 ipTM=0.181 tol=2.98 2024-07-11 01:39:35,802 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=77.8 pTM=0.461 ipTM=0.182 tol=2.66 2024-07-11 01:39:49,719 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=77.8 pTM=0.463 ipTM=0.184 tol=5.34 2024-07-11 01:40:03,644 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=77.8 pTM=0.464 ipTM=0.19 tol=3.1 2024-07-11 01:40:17,565 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=78.1 pTM=0.465 ipTM=0.185 tol=2.36 2024-07-11 01:40:31,487 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=77.8 pTM=0.465 ipTM=0.187 tol=1.48 2024-07-11 01:40:45,415 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=78 pTM=0.464 ipTM=0.186 tol=1.54 2024-07-11 01:40:59,344 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=77.9 pTM=0.46 ipTM=0.182 tol=0.962 2024-07-11 01:41:13,257 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=77.8 pTM=0.464 ipTM=0.185 tol=2.58 2024-07-11 01:41:27,169 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=77.8 pTM=0.462 ipTM=0.185 tol=2.18 2024-07-11 01:41:41,072 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=77.9 pTM=0.462 ipTM=0.182 tol=1.14 2024-07-11 01:41:54,985 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=77.9 pTM=0.462 ipTM=0.186 tol=1.24 2024-07-11 01:42:08,886 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=77.8 pTM=0.462 ipTM=0.179 tol=1.45 2024-07-11 01:42:22,812 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=77.9 pTM=0.461 ipTM=0.178 tol=1.06 2024-07-11 01:42:36,714 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=78.1 pTM=0.464 ipTM=0.178 tol=1.94 2024-07-11 01:42:50,627 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=77.9 pTM=0.459 ipTM=0.178 tol=1.91 2024-07-11 01:43:04,534 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=77.6 pTM=0.461 ipTM=0.18 tol=1.27 2024-07-11 01:43:04,534 alphafold2_multimer_v3_model_4_seed_000 took 431.6s (30 recycles) 2024-07-11 01:43:18,920 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=77.2 pTM=0.463 ipTM=0.191 2024-07-11 01:43:32,899 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=78.4 pTM=0.462 ipTM=0.201 tol=5.93 2024-07-11 01:43:46,878 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=78.4 pTM=0.466 ipTM=0.204 tol=4.91 2024-07-11 01:44:00,855 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=78.5 pTM=0.467 ipTM=0.188 tol=2.57 2024-07-11 01:44:14,840 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=78.5 pTM=0.468 ipTM=0.192 tol=2.2 2024-07-11 01:44:28,818 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=78.2 pTM=0.464 ipTM=0.185 tol=1.73 2024-07-11 01:44:42,773 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=78.4 pTM=0.466 ipTM=0.191 tol=1.03 2024-07-11 01:44:56,746 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=78.2 pTM=0.462 ipTM=0.184 tol=1.65 2024-07-11 01:45:10,717 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=78.4 pTM=0.465 ipTM=0.19 tol=1.41 2024-07-11 01:45:24,695 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=78.2 pTM=0.46 ipTM=0.18 tol=1.67 2024-07-11 01:45:38,667 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=78.3 pTM=0.463 ipTM=0.193 tol=1.55 2024-07-11 01:45:52,660 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=78.3 pTM=0.459 ipTM=0.185 tol=0.96 2024-07-11 01:46:06,638 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=78.1 pTM=0.458 ipTM=0.183 tol=1.62 2024-07-11 01:46:20,615 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=78.1 pTM=0.456 ipTM=0.179 tol=1.33 2024-07-11 01:46:34,604 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=78.2 pTM=0.458 ipTM=0.182 tol=1.4 2024-07-11 01:46:48,588 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=78.1 pTM=0.459 ipTM=0.186 tol=1.93 2024-07-11 01:47:02,575 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=78.1 pTM=0.459 ipTM=0.181 tol=2.05 2024-07-11 01:47:16,532 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=78 pTM=0.46 ipTM=0.2 tol=2.46 2024-07-11 01:47:30,505 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=78.1 pTM=0.461 ipTM=0.19 tol=1.83 2024-07-11 01:47:44,496 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=77.9 pTM=0.457 ipTM=0.183 tol=1.42 2024-07-11 01:47:58,463 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=77.9 pTM=0.457 ipTM=0.183 tol=1.18 2024-07-11 01:48:12,426 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=78 pTM=0.456 ipTM=0.184 tol=2.43 2024-07-11 01:48:26,406 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=77.9 pTM=0.457 ipTM=0.179 tol=1.55 2024-07-11 01:48:40,369 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=77.6 pTM=0.456 ipTM=0.184 tol=1.6 2024-07-11 01:48:54,347 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=78.1 pTM=0.458 ipTM=0.181 tol=1.47 2024-07-11 01:49:08,322 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=77.9 pTM=0.457 ipTM=0.183 tol=1.78 2024-07-11 01:49:22,289 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=78 pTM=0.458 ipTM=0.184 tol=1.96 2024-07-11 01:49:36,250 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=77.8 pTM=0.457 ipTM=0.194 tol=1.54 2024-07-11 01:49:50,232 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=78.1 pTM=0.457 ipTM=0.183 tol=1.76 2024-07-11 01:50:04,191 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=77.8 pTM=0.455 ipTM=0.178 tol=1.99 2024-07-11 01:50:18,179 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=78.1 pTM=0.458 ipTM=0.181 tol=1.87 2024-07-11 01:50:18,180 alphafold2_multimer_v3_model_5_seed_000 took 433.2s (30 recycles) 2024-07-11 01:50:18,609 reranking models by 'multimer' metric 2024-07-11 01:50:21,643 Warning: importing 'simtk.openmm' is deprecated. Import 'openmm' instead. 2024-07-11 01:51:18,807 Relaxation took 60.2s 2024-07-11 01:51:18,807 rank_001_alphafold2_multimer_v3_model_3_seed_000 pLDDT=79.4 pTM=0.463 ipTM=0.2 2024-07-11 01:52:01,667 Relaxation took 42.9s 2024-07-11 01:52:01,667 rank_002_alphafold2_multimer_v3_model_2_seed_000 pLDDT=78.8 pTM=0.456 ipTM=0.192 2024-07-11 01:52:53,430 Relaxation took 51.8s 2024-07-11 01:52:53,430 rank_003_alphafold2_multimer_v3_model_1_seed_000 pLDDT=76.2 pTM=0.446 ipTM=0.188 2024-07-11 01:53:53,786 Relaxation took 60.4s 2024-07-11 01:53:53,786 rank_004_alphafold2_multimer_v3_model_5_seed_000 pLDDT=78.1 pTM=0.458 ipTM=0.181 2024-07-11 01:54:52,147 Relaxation took 58.4s 2024-07-11 01:54:52,148 rank_005_alphafold2_multimer_v3_model_4_seed_000 pLDDT=77.6 pTM=0.461 ipTM=0.18 2024-07-11 01:54:53,670 Done