2024-07-11 02:27:56,148 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3)
2024-07-11 02:27:57,272 Running on GPU
2024-07-11 02:28:01,672 Found 6 citations for tools or databases
2024-07-11 02:28:01,672 Query 1/1: KR87P_PKHO1 (length 664)
2024-07-11 02:28:02,165 Sleeping for 5s. Reason: PENDING
2024-07-11 02:28:07,603 Sleeping for 10s. Reason: RUNNING
2024-07-11 02:28:18,022 Sleeping for 9s. Reason: RUNNING
2024-07-11 02:28:27,442 Sleeping for 8s. Reason: RUNNING
2024-07-11 02:28:36,026 Sleeping for 8s. Reason: RUNNING
2024-07-11 02:28:44,462 Sleeping for 10s. Reason: RUNNING
2024-07-11 02:28:56,653 Sleeping for 7s. Reason: PENDING
2024-07-11 02:29:04,064 Sleeping for 8s. Reason: RUNNING
2024-07-11 02:29:12,470 Sleeping for 10s. Reason: RUNNING
2024-07-11 02:29:22,875 Sleeping for 8s. Reason: RUNNING
2024-07-11 02:29:33,608 Setting max_seq=508, max_extra_seq=2048
2024-07-11 02:32:40,563 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=53.9 pTM=0.246 ipTM=0.093
2024-07-11 02:32:51,332 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=54.5 pTM=0.242 ipTM=0.0963 tol=17.3
2024-07-11 02:33:02,101 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=54.1 pTM=0.241 ipTM=0.0959 tol=7.65
2024-07-11 02:33:12,870 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=54.2 pTM=0.241 ipTM=0.0949 tol=4.95
2024-07-11 02:33:23,645 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=54.5 pTM=0.242 ipTM=0.0954 tol=6.71
2024-07-11 02:33:34,434 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=54.6 pTM=0.24 ipTM=0.0941 tol=5.7
2024-07-11 02:33:45,221 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=53.5 pTM=0.244 ipTM=0.0953 tol=6.12
2024-07-11 02:33:56,009 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=52.8 pTM=0.241 ipTM=0.0964 tol=6.27
2024-07-11 02:34:06,810 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=53.2 pTM=0.242 ipTM=0.0956 tol=7.14
2024-07-11 02:34:17,608 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=53.1 pTM=0.241 ipTM=0.0959 tol=4.09
2024-07-11 02:34:28,413 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=54 pTM=0.242 ipTM=0.0962 tol=3.49
2024-07-11 02:34:39,222 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=53.8 pTM=0.241 ipTM=0.096 tol=6.84
2024-07-11 02:34:50,033 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=53.4 pTM=0.242 ipTM=0.0953 tol=3.07
2024-07-11 02:35:00,840 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=53.8 pTM=0.242 ipTM=0.0948 tol=3.65
2024-07-11 02:35:11,656 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=53.8 pTM=0.244 ipTM=0.0965 tol=4.43
2024-07-11 02:35:22,478 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=53.8 pTM=0.243 ipTM=0.0948 tol=6.05
2024-07-11 02:35:33,304 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=53.6 pTM=0.244 ipTM=0.0961 tol=8.98
2024-07-11 02:35:44,123 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=51.9 pTM=0.243 ipTM=0.0958 tol=10
2024-07-11 02:35:54,942 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=52.5 pTM=0.245 ipTM=0.0971 tol=7.74
2024-07-11 02:36:05,760 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=51.8 pTM=0.243 ipTM=0.0988 tol=7.25
2024-07-11 02:36:16,576 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=52.3 pTM=0.245 ipTM=0.11 tol=4.29
2024-07-11 02:36:27,377 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=54.7 pTM=0.253 ipTM=0.197 tol=6.93
2024-07-11 02:36:38,181 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=53.5 pTM=0.244 ipTM=0.155 tol=6.23
2024-07-11 02:36:48,997 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=54.6 pTM=0.244 ipTM=0.115 tol=5.62
2024-07-11 02:36:59,826 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=54.8 pTM=0.243 ipTM=0.0973 tol=4.28
2024-07-11 02:37:10,647 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=54.4 pTM=0.244 ipTM=0.0975 tol=3.49
2024-07-11 02:37:21,473 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=54.2 pTM=0.246 ipTM=0.099 tol=9.63
2024-07-11 02:37:32,297 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=54.5 pTM=0.244 ipTM=0.0991 tol=5.7
2024-07-11 02:37:43,118 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=53.6 pTM=0.245 ipTM=0.0987 tol=4.74
2024-07-11 02:37:53,930 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=52.4 pTM=0.247 ipTM=0.167 tol=9.89
2024-07-11 02:38:04,745 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=54.2 pTM=0.245 ipTM=0.175 tol=7
2024-07-11 02:38:04,746 alphafold2_multimer_v3_model_1_seed_000 took 490.5s (30 recycles)
2024-07-11 02:38:15,997 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=49.7 pTM=0.245 ipTM=0.0992
2024-07-11 02:38:26,841 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=51.4 pTM=0.248 ipTM=0.1 tol=34.6
2024-07-11 02:38:37,685 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=50.8 pTM=0.247 ipTM=0.102 tol=10.5
2024-07-11 02:38:48,532 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=51.5 pTM=0.248 ipTM=0.0999 tol=6
2024-07-11 02:38:59,377 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=51.9 pTM=0.248 ipTM=0.0997 tol=5.01
2024-07-11 02:39:10,228 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=52 pTM=0.249 ipTM=0.0999 tol=4.32
2024-07-11 02:39:21,073 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=51.9 pTM=0.249 ipTM=0.101 tol=6.64
2024-07-11 02:39:31,924 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=49.9 pTM=0.248 ipTM=0.0999 tol=8.93
2024-07-11 02:39:42,775 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=51.4 pTM=0.248 ipTM=0.099 tol=6.43
2024-07-11 02:39:53,614 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=51.5 pTM=0.248 ipTM=0.101 tol=7.05
2024-07-11 02:40:04,462 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=51.4 pTM=0.247 ipTM=0.101 tol=6.84
2024-07-11 02:40:15,315 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=52 pTM=0.246 ipTM=0.0995 tol=5.61
2024-07-11 02:40:26,165 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=51.5 pTM=0.247 ipTM=0.0986 tol=5.92
2024-07-11 02:40:37,012 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=51.9 pTM=0.247 ipTM=0.0994 tol=5.15
2024-07-11 02:40:47,858 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=52.4 pTM=0.247 ipTM=0.0992 tol=8.09
2024-07-11 02:40:58,705 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=50.9 pTM=0.247 ipTM=0.099 tol=7.75
2024-07-11 02:41:09,547 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=51.2 pTM=0.248 ipTM=0.109 tol=5.45
2024-07-11 02:41:20,408 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=51.3 pTM=0.246 ipTM=0.0989 tol=6.78
2024-07-11 02:41:31,266 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=51.6 pTM=0.248 ipTM=0.0986 tol=20.5
2024-07-11 02:41:42,113 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=52.5 pTM=0.247 ipTM=0.178 tol=23
2024-07-11 02:41:52,948 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=52.4 pTM=0.249 ipTM=0.17 tol=5.7
2024-07-11 02:42:03,784 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=53.6 pTM=0.25 ipTM=0.119 tol=29.6
2024-07-11 02:42:14,628 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=54.2 pTM=0.253 ipTM=0.215 tol=30.5
2024-07-11 02:42:25,458 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=53.8 pTM=0.248 ipTM=0.197 tol=5.53
2024-07-11 02:42:36,289 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=52.5 pTM=0.249 ipTM=0.131 tol=14.3
2024-07-11 02:42:47,118 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=52.7 pTM=0.25 ipTM=0.118 tol=24.6
2024-07-11 02:42:57,957 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=52.2 pTM=0.25 ipTM=0.167 tol=27.8
2024-07-11 02:43:08,778 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=54.4 pTM=0.278 ipTM=0.26 tol=4.38
2024-07-11 02:43:19,610 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=53 pTM=0.248 ipTM=0.184 tol=7.34
2024-07-11 02:43:30,438 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=52.4 pTM=0.249 ipTM=0.163 tol=9.06
2024-07-11 02:43:41,279 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=52.9 pTM=0.246 ipTM=0.154 tol=6.56
2024-07-11 02:43:41,280 alphafold2_multimer_v3_model_2_seed_000 took 336.1s (30 recycles)
2024-07-11 02:43:52,542 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=47.4 pTM=0.246 ipTM=0.121
2024-07-11 02:44:03,372 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=48.8 pTM=0.26 ipTM=0.245 tol=17.3
2024-07-11 02:44:14,175 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=52.9 pTM=0.3 ipTM=0.317 tol=18.6
2024-07-11 02:44:24,955 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=54.8 pTM=0.372 ipTM=0.36 tol=7.04
2024-07-11 02:44:35,742 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=51.8 pTM=0.343 ipTM=0.251 tol=8.44
2024-07-11 02:44:46,519 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=52.2 pTM=0.347 ipTM=0.278 tol=3.28
2024-07-11 02:44:57,300 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=52.4 pTM=0.358 ipTM=0.273 tol=2.81
2024-07-11 02:45:08,077 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=51.8 pTM=0.358 ipTM=0.277 tol=2.32
2024-07-11 02:45:18,860 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=51.2 pTM=0.346 ipTM=0.237 tol=3.06
2024-07-11 02:45:29,635 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=52.2 pTM=0.358 ipTM=0.271 tol=2.25
2024-07-11 02:45:40,408 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=52.5 pTM=0.357 ipTM=0.274 tol=2.66
2024-07-11 02:45:51,173 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=52.8 pTM=0.374 ipTM=0.296 tol=2.31
2024-07-11 02:46:01,937 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=51.8 pTM=0.362 ipTM=0.278 tol=1.56
2024-07-11 02:46:12,696 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=53.4 pTM=0.379 ipTM=0.308 tol=1.66
2024-07-11 02:46:23,459 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=52.3 pTM=0.359 ipTM=0.274 tol=1.51
2024-07-11 02:46:34,222 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=52.3 pTM=0.363 ipTM=0.279 tol=1.45
2024-07-11 02:46:44,992 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=51.7 pTM=0.359 ipTM=0.268 tol=1.26
2024-07-11 02:46:55,751 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=53.2 pTM=0.394 ipTM=0.331 tol=1.6
2024-07-11 02:47:06,512 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=52.6 pTM=0.384 ipTM=0.316 tol=1.55
2024-07-11 02:47:17,271 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=52.2 pTM=0.368 ipTM=0.285 tol=1.34
2024-07-11 02:47:28,033 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=52.2 pTM=0.368 ipTM=0.291 tol=1.12
2024-07-11 02:47:38,788 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=53.2 pTM=0.373 ipTM=0.303 tol=1.35
2024-07-11 02:47:49,549 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=53.6 pTM=0.37 ipTM=0.3 tol=1.32
2024-07-11 02:48:00,309 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=52.4 pTM=0.361 ipTM=0.279 tol=1.71
2024-07-11 02:48:11,071 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=53.3 pTM=0.367 ipTM=0.292 tol=1.4
2024-07-11 02:48:21,829 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=52.4 pTM=0.361 ipTM=0.285 tol=1.48
2024-07-11 02:48:32,583 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=54.1 pTM=0.391 ipTM=0.334 tol=1.42
2024-07-11 02:48:43,352 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=50.3 pTM=0.33 ipTM=0.198 tol=3.65
2024-07-11 02:48:54,105 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=53.1 pTM=0.375 ipTM=0.304 tol=3.83
2024-07-11 02:49:04,900 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=48.9 pTM=0.313 ipTM=0.15 tol=10.5
2024-07-11 02:49:15,658 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=53.1 pTM=0.378 ipTM=0.319 tol=10.3
2024-07-11 02:49:15,658 alphafold2_multimer_v3_model_3_seed_000 took 334.0s (30 recycles)
2024-07-11 02:49:26,924 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=43.1 pTM=0.255 ipTM=0.116
2024-07-11 02:49:37,775 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=42.8 pTM=0.259 ipTM=0.137 tol=12.5
2024-07-11 02:49:48,629 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=42.4 pTM=0.257 ipTM=0.123 tol=10.4
2024-07-11 02:49:59,492 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=42 pTM=0.257 ipTM=0.122 tol=6.8
2024-07-11 02:50:10,354 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=42.6 pTM=0.259 ipTM=0.117 tol=5.89
2024-07-11 02:50:21,212 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=44.8 pTM=0.255 ipTM=0.15 tol=21.1
2024-07-11 02:50:32,061 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=44.1 pTM=0.257 ipTM=0.134 tol=5.98
2024-07-11 02:50:42,927 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=44.5 pTM=0.254 ipTM=0.13 tol=11
2024-07-11 02:50:53,782 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=44.8 pTM=0.258 ipTM=0.132 tol=9.71
2024-07-11 02:51:04,646 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=44.1 pTM=0.257 ipTM=0.115 tol=8.87
2024-07-11 02:51:15,500 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=44.2 pTM=0.258 ipTM=0.142 tol=10.6
2024-07-11 02:51:26,384 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=43.3 pTM=0.254 ipTM=0.136 tol=16.5
2024-07-11 02:51:37,248 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=43.4 pTM=0.26 ipTM=0.144 tol=9.74
2024-07-11 02:51:48,087 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=43.9 pTM=0.259 ipTM=0.149 tol=15.1
2024-07-11 02:51:58,940 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=43.4 pTM=0.258 ipTM=0.129 tol=10.9
2024-07-11 02:52:09,780 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=44.2 pTM=0.259 ipTM=0.159 tol=12
2024-07-11 02:52:20,630 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=43.5 pTM=0.261 ipTM=0.136 tol=12.7
2024-07-11 02:52:31,479 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=44.2 pTM=0.256 ipTM=0.157 tol=13.3
2024-07-11 02:52:42,325 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=43.4 pTM=0.259 ipTM=0.133 tol=12.6
2024-07-11 02:52:53,186 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=44.1 pTM=0.254 ipTM=0.139 tol=12.4
2024-07-11 02:53:04,022 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=43.5 pTM=0.26 ipTM=0.15 tol=12.2
2024-07-11 02:53:14,868 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=43 pTM=0.258 ipTM=0.156 tol=8.41
2024-07-11 02:53:25,724 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=43.5 pTM=0.257 ipTM=0.159 tol=9.23
2024-07-11 02:53:36,564 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=43.9 pTM=0.257 ipTM=0.177 tol=14.2
2024-07-11 02:53:47,392 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=43.5 pTM=0.26 ipTM=0.166 tol=11.9
2024-07-11 02:53:58,239 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=43.6 pTM=0.258 ipTM=0.142 tol=10
2024-07-11 02:54:09,073 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=44.4 pTM=0.261 ipTM=0.173 tol=8.86
2024-07-11 02:54:19,930 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=44.3 pTM=0.255 ipTM=0.155 tol=13.3
2024-07-11 02:54:30,789 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=43.8 pTM=0.256 ipTM=0.154 tol=11.8
2024-07-11 02:54:41,621 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=44.2 pTM=0.261 ipTM=0.174 tol=9.35
2024-07-11 02:54:52,455 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=43.5 pTM=0.261 ipTM=0.169 tol=8.13
2024-07-11 02:54:52,455 alphafold2_multimer_v3_model_4_seed_000 took 336.4s (30 recycles)
2024-07-11 02:55:03,731 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=47.2 pTM=0.25 ipTM=0.108
2024-07-11 02:55:14,553 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=49.6 pTM=0.26 ipTM=0.248 tol=13.9
2024-07-11 02:55:25,371 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=48.8 pTM=0.259 ipTM=0.198 tol=6.91
2024-07-11 02:55:36,194 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=49.1 pTM=0.257 ipTM=0.148 tol=5.18
2024-07-11 02:55:46,997 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=51.6 pTM=0.292 ipTM=0.32 tol=6.41
2024-07-11 02:55:57,827 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=48.8 pTM=0.258 ipTM=0.141 tol=5.67
2024-07-11 02:56:08,646 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=51.6 pTM=0.279 ipTM=0.28 tol=6.73
2024-07-11 02:56:19,485 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=48.4 pTM=0.254 ipTM=0.135 tol=7.06
2024-07-11 02:56:30,306 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=51.1 pTM=0.27 ipTM=0.253 tol=6.62
2024-07-11 02:56:41,148 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=48.6 pTM=0.256 ipTM=0.13 tol=7.55
2024-07-11 02:56:51,966 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=51.2 pTM=0.278 ipTM=0.271 tol=6.68
2024-07-11 02:57:02,793 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=48.7 pTM=0.256 ipTM=0.145 tol=5.47
2024-07-11 02:57:13,599 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=52.4 pTM=0.296 ipTM=0.316 tol=5.85
2024-07-11 02:57:24,411 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=49.5 pTM=0.258 ipTM=0.178 tol=4.61
2024-07-11 02:57:35,216 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=52.6 pTM=0.308 ipTM=0.337 tol=3.14
2024-07-11 02:57:46,030 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=49.7 pTM=0.26 ipTM=0.176 tol=3.52
2024-07-11 02:57:56,829 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=52.7 pTM=0.321 ipTM=0.372 tol=4.08
2024-07-11 02:58:07,647 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=49 pTM=0.261 ipTM=0.181 tol=3.88
2024-07-11 02:58:18,447 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=52.8 pTM=0.305 ipTM=0.337 tol=3.87
2024-07-11 02:58:29,269 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=49.2 pTM=0.258 ipTM=0.145 tol=5.18
2024-07-11 02:58:40,080 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=50.4 pTM=0.261 ipTM=0.21 tol=3.66
2024-07-11 02:58:50,912 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=49.2 pTM=0.254 ipTM=0.128 tol=9.69
2024-07-11 02:59:01,745 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=50.5 pTM=0.255 ipTM=0.198 tol=9.2
2024-07-11 02:59:12,575 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=48.5 pTM=0.254 ipTM=0.131 tol=5.36
2024-07-11 02:59:23,391 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=51.4 pTM=0.269 ipTM=0.236 tol=6.52
2024-07-11 02:59:34,212 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=48.8 pTM=0.257 ipTM=0.132 tol=6.26
2024-07-11 02:59:45,006 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=52.2 pTM=0.294 ipTM=0.304 tol=7.64
2024-07-11 02:59:55,822 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=48.8 pTM=0.259 ipTM=0.141 tol=5.14
2024-07-11 03:00:06,627 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=52.6 pTM=0.289 ipTM=0.296 tol=4.94
2024-07-11 03:00:17,446 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=49.4 pTM=0.259 ipTM=0.141 tol=4.81
2024-07-11 03:00:28,250 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=52.3 pTM=0.282 ipTM=0.281 tol=4.5
2024-07-11 03:00:28,251 alphafold2_multimer_v3_model_5_seed_000 took 335.4s (30 recycles)
2024-07-11 03:00:28,667 reranking models by 'multimer' metric
2024-07-11 03:00:32,834 Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
2024-07-11 03:01:42,005 Relaxation took 73.3s
2024-07-11 03:01:42,005 rank_001_alphafold2_multimer_v3_model_3_seed_000 pLDDT=53.1 pTM=0.378 ipTM=0.319
2024-07-11 03:07:00,081 Relaxation took 318.1s
2024-07-11 03:07:00,081 rank_002_alphafold2_multimer_v3_model_5_seed_000 pLDDT=52.3 pTM=0.282 ipTM=0.281
2024-07-11 03:07:42,378 Relaxation took 42.3s
2024-07-11 03:07:42,378 rank_003_alphafold2_multimer_v3_model_1_seed_000 pLDDT=54.2 pTM=0.245 ipTM=0.175
2024-07-11 03:08:47,230 Relaxation took 64.9s
2024-07-11 03:08:47,231 rank_004_alphafold2_multimer_v3_model_4_seed_000 pLDDT=43.5 pTM=0.261 ipTM=0.169
2024-07-11 03:09:30,969 Relaxation took 43.7s
2024-07-11 03:09:30,970 rank_005_alphafold2_multimer_v3_model_2_seed_000 pLDDT=52.9 pTM=0.246 ipTM=0.154
2024-07-11 03:09:32,579 Done