2024-07-11 02:55:30,465 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3)
2024-07-11 02:55:30,811 Running on GPU
2024-07-11 02:55:34,579 Found 6 citations for tools or databases
2024-07-11 02:55:34,580 Query 1/1: LAIR1_NBPF4 (length 925)
2024-07-11 02:55:35,068 Sleeping for 6s. Reason: PENDING
2024-07-11 02:55:41,499 Sleeping for 7s. Reason: RUNNING
2024-07-11 02:55:49,040 Sleeping for 7s. Reason: RUNNING
2024-07-11 02:55:56,460 Sleeping for 10s. Reason: RUNNING
2024-07-11 02:56:06,855 Sleeping for 10s. Reason: RUNNING
2024-07-11 02:56:17,317 Sleeping for 8s. Reason: RUNNING
2024-07-11 02:56:25,782 Sleeping for 7s. Reason: RUNNING
2024-07-11 02:56:33,237 Sleeping for 6s. Reason: RUNNING
2024-07-11 02:56:41,192 Sleeping for 8s. Reason: PENDING
2024-07-11 02:56:49,605 Sleeping for 9s. Reason: RUNNING
2024-07-11 02:56:59,016 Sleeping for 9s. Reason: RUNNING
2024-07-11 02:57:08,411 Sleeping for 5s. Reason: RUNNING
2024-07-11 02:57:15,544 Setting max_seq=508, max_extra_seq=2048
2024-07-11 03:00:18,995 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=31.1 pTM=0.23 ipTM=0.17
2024-07-11 03:00:36,858 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=29.3 pTM=0.234 ipTM=0.163 tol=22.7
2024-07-11 03:00:54,793 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=29.1 pTM=0.237 ipTM=0.176 tol=16.6
2024-07-11 03:01:12,784 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=29.6 pTM=0.236 ipTM=0.157 tol=10.2
2024-07-11 03:01:30,820 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=29.6 pTM=0.238 ipTM=0.17 tol=9.93
2024-07-11 03:01:48,878 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=29.2 pTM=0.236 ipTM=0.162 tol=8.23
2024-07-11 03:02:06,965 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=29.7 pTM=0.239 ipTM=0.17 tol=6.73
2024-07-11 03:02:25,074 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=29.5 pTM=0.237 ipTM=0.165 tol=6.82
2024-07-11 03:02:43,190 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=29.7 pTM=0.236 ipTM=0.158 tol=9.07
2024-07-11 03:03:01,311 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=29.4 pTM=0.235 ipTM=0.164 tol=5.23
2024-07-11 03:03:19,433 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=29.5 pTM=0.235 ipTM=0.152 tol=7.67
2024-07-11 03:03:37,555 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=29.3 pTM=0.237 ipTM=0.168 tol=9.35
2024-07-11 03:03:55,681 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=29.4 pTM=0.235 ipTM=0.163 tol=5.85
2024-07-11 03:04:13,821 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=29.3 pTM=0.236 ipTM=0.162 tol=6.57
2024-07-11 03:04:31,966 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=29.2 pTM=0.234 ipTM=0.16 tol=7.05
2024-07-11 03:04:50,112 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=29.7 pTM=0.235 ipTM=0.161 tol=6
2024-07-11 03:05:08,262 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=29.5 pTM=0.235 ipTM=0.16 tol=10.7
2024-07-11 03:05:26,408 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=29.4 pTM=0.238 ipTM=0.17 tol=5.57
2024-07-11 03:05:44,557 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=29.9 pTM=0.235 ipTM=0.167 tol=5.54
2024-07-11 03:06:02,699 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=29.8 pTM=0.237 ipTM=0.169 tol=6.18
2024-07-11 03:06:20,838 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=29.7 pTM=0.237 ipTM=0.168 tol=6.83
2024-07-11 03:06:38,980 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=29.9 pTM=0.236 ipTM=0.166 tol=5.2
2024-07-11 03:06:57,123 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=29.7 pTM=0.238 ipTM=0.175 tol=8.25
2024-07-11 03:07:15,254 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=29.8 pTM=0.235 ipTM=0.158 tol=4.82
2024-07-11 03:07:33,390 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=29.7 pTM=0.237 ipTM=0.166 tol=7.61
2024-07-11 03:07:51,532 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=29.7 pTM=0.237 ipTM=0.166 tol=6.42
2024-07-11 03:08:09,692 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=30.2 pTM=0.236 ipTM=0.167 tol=6.68
2024-07-11 03:08:27,831 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=29.7 pTM=0.238 ipTM=0.172 tol=15.4
2024-07-11 03:08:45,970 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=29.8 pTM=0.237 ipTM=0.172 tol=10.4
2024-07-11 03:09:04,110 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=29.7 pTM=0.235 ipTM=0.162 tol=8.65
2024-07-11 03:09:22,244 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=29.8 pTM=0.236 ipTM=0.175 tol=6.6
2024-07-11 03:09:22,244 alphafold2_multimer_v3_model_1_seed_000 took 721.6s (30 recycles)
2024-07-11 03:09:40,855 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=32.3 pTM=0.224 ipTM=0.137
2024-07-11 03:09:58,970 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=32.8 pTM=0.229 ipTM=0.139 tol=23.1
2024-07-11 03:10:17,088 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=32.1 pTM=0.228 ipTM=0.143 tol=10.9
2024-07-11 03:10:35,229 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=32.3 pTM=0.229 ipTM=0.148 tol=8.47
2024-07-11 03:10:53,370 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=32.5 pTM=0.228 ipTM=0.149 tol=12.4
2024-07-11 03:11:11,520 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=32.2 pTM=0.228 ipTM=0.15 tol=7.82
2024-07-11 03:11:29,687 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=32.3 pTM=0.228 ipTM=0.15 tol=7.61
2024-07-11 03:11:47,844 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=32.1 pTM=0.228 ipTM=0.144 tol=7.79
2024-07-11 03:12:06,011 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=32.4 pTM=0.228 ipTM=0.148 tol=10.5
2024-07-11 03:12:24,171 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=32.2 pTM=0.231 ipTM=0.152 tol=10.7
2024-07-11 03:12:42,329 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=32.2 pTM=0.23 ipTM=0.156 tol=9.29
2024-07-11 03:13:00,499 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=32.4 pTM=0.231 ipTM=0.162 tol=7.06
2024-07-11 03:13:18,647 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=32.9 pTM=0.231 ipTM=0.186 tol=12.6
2024-07-11 03:13:36,796 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=32.3 pTM=0.23 ipTM=0.183 tol=13.7
2024-07-11 03:13:54,941 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=32.2 pTM=0.23 ipTM=0.179 tol=14.5
2024-07-11 03:14:13,090 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=32.1 pTM=0.23 ipTM=0.176 tol=11.3
2024-07-11 03:14:31,235 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=32.4 pTM=0.23 ipTM=0.178 tol=6.45
2024-07-11 03:14:49,394 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=32.5 pTM=0.23 ipTM=0.179 tol=4.31
2024-07-11 03:15:07,550 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=32.9 pTM=0.23 ipTM=0.179 tol=5.99
2024-07-11 03:15:25,704 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=32.5 pTM=0.231 ipTM=0.177 tol=7.88
2024-07-11 03:15:43,849 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=32.6 pTM=0.23 ipTM=0.177 tol=7.5
2024-07-11 03:16:01,973 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=32.5 pTM=0.231 ipTM=0.175 tol=7.99
2024-07-11 03:16:20,110 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=32.3 pTM=0.233 ipTM=0.177 tol=5.46
2024-07-11 03:16:38,240 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=32.4 pTM=0.233 ipTM=0.18 tol=4.62
2024-07-11 03:16:56,370 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=32.6 pTM=0.232 ipTM=0.178 tol=3.33
2024-07-11 03:17:14,501 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=32 pTM=0.232 ipTM=0.174 tol=7.48
2024-07-11 03:17:32,627 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=32.8 pTM=0.232 ipTM=0.18 tol=6.82
2024-07-11 03:17:50,762 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=32.2 pTM=0.232 ipTM=0.174 tol=4.42
2024-07-11 03:18:08,894 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=32.3 pTM=0.232 ipTM=0.179 tol=3.59
2024-07-11 03:18:27,026 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=32.4 pTM=0.231 ipTM=0.178 tol=9.53
2024-07-11 03:18:45,149 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=32.2 pTM=0.231 ipTM=0.18 tol=9.05
2024-07-11 03:18:45,150 alphafold2_multimer_v3_model_2_seed_000 took 562.4s (30 recycles)
2024-07-11 03:19:03,999 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=32.3 pTM=0.225 ipTM=0.122
2024-07-11 03:19:22,370 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=32.1 pTM=0.226 ipTM=0.126 tol=19.2
2024-07-11 03:19:40,725 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=32.3 pTM=0.229 ipTM=0.128 tol=15.9
2024-07-11 03:19:59,076 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=32.8 pTM=0.229 ipTM=0.13 tol=15.7
2024-07-11 03:20:17,458 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=32.5 pTM=0.229 ipTM=0.137 tol=15.6
2024-07-11 03:20:35,824 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=32.3 pTM=0.229 ipTM=0.135 tol=16
2024-07-11 03:20:54,206 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=32.8 pTM=0.231 ipTM=0.139 tol=13.9
2024-07-11 03:21:12,589 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=33.6 pTM=0.229 ipTM=0.136 tol=11.7
2024-07-11 03:21:30,953 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=33.5 pTM=0.231 ipTM=0.139 tol=8.34
2024-07-11 03:21:49,327 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=33.2 pTM=0.23 ipTM=0.137 tol=6.84
2024-07-11 03:22:07,700 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=33.2 pTM=0.232 ipTM=0.14 tol=12
2024-07-11 03:22:26,070 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=33.2 pTM=0.229 ipTM=0.138 tol=11.6
2024-07-11 03:22:44,442 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=33.2 pTM=0.231 ipTM=0.139 tol=9.55
2024-07-11 03:23:02,807 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=33.4 pTM=0.231 ipTM=0.14 tol=6.91
2024-07-11 03:23:21,159 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=33.2 pTM=0.231 ipTM=0.139 tol=5.98
2024-07-11 03:23:39,527 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=33.4 pTM=0.232 ipTM=0.141 tol=5.84
2024-07-11 03:23:57,898 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=33.1 pTM=0.231 ipTM=0.14 tol=7.09
2024-07-11 03:24:16,264 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=33 pTM=0.232 ipTM=0.142 tol=14.8
2024-07-11 03:24:34,623 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=33.4 pTM=0.23 ipTM=0.14 tol=12.6
2024-07-11 03:24:52,982 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=33.5 pTM=0.231 ipTM=0.149 tol=6.95
2024-07-11 03:25:11,343 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=33.3 pTM=0.231 ipTM=0.143 tol=8.84
2024-07-11 03:25:29,685 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=33.5 pTM=0.231 ipTM=0.145 tol=10.2
2024-07-11 03:25:48,038 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=33.2 pTM=0.232 ipTM=0.145 tol=8.62
2024-07-11 03:26:06,383 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=33.5 pTM=0.231 ipTM=0.142 tol=11.2
2024-07-11 03:26:24,733 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=33.3 pTM=0.231 ipTM=0.142 tol=12.2
2024-07-11 03:26:43,079 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=33 pTM=0.232 ipTM=0.143 tol=12.4
2024-07-11 03:27:01,450 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=33.2 pTM=0.234 ipTM=0.141 tol=14.2
2024-07-11 03:27:19,819 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=33.2 pTM=0.232 ipTM=0.142 tol=12.5
2024-07-11 03:27:38,197 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=33.1 pTM=0.233 ipTM=0.144 tol=10.2
2024-07-11 03:27:56,573 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=33.5 pTM=0.233 ipTM=0.142 tol=9.33
2024-07-11 03:28:14,937 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=33.6 pTM=0.233 ipTM=0.147 tol=7.86
2024-07-11 03:28:14,937 alphafold2_multimer_v3_model_3_seed_000 took 569.3s (30 recycles)
2024-07-11 03:28:33,739 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=30.3 pTM=0.244 ipTM=0.193
2024-07-11 03:28:52,041 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=30.8 pTM=0.239 ipTM=0.151 tol=20.4
2024-07-11 03:29:10,335 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=30.8 pTM=0.239 ipTM=0.15 tol=11.7
2024-07-11 03:29:28,658 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=31.4 pTM=0.233 ipTM=0.146 tol=16.2
2024-07-11 03:29:46,967 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=31.2 pTM=0.233 ipTM=0.145 tol=13
2024-07-11 03:30:05,253 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=31.1 pTM=0.238 ipTM=0.151 tol=13.3
2024-07-11 03:30:23,563 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=31.1 pTM=0.236 ipTM=0.149 tol=9.11
2024-07-11 03:30:41,879 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=31.2 pTM=0.236 ipTM=0.15 tol=11.1
2024-07-11 03:31:00,179 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=31 pTM=0.238 ipTM=0.149 tol=8.91
2024-07-11 03:31:18,450 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=30.8 pTM=0.242 ipTM=0.154 tol=11.2
2024-07-11 03:31:36,740 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=30.9 pTM=0.24 ipTM=0.155 tol=7.91
2024-07-11 03:31:55,004 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=31.1 pTM=0.244 ipTM=0.156 tol=9.62
2024-07-11 03:32:13,287 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=31 pTM=0.244 ipTM=0.151 tol=9.2
2024-07-11 03:32:31,544 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=31.1 pTM=0.246 ipTM=0.164 tol=6.6
2024-07-11 03:32:49,794 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=31 pTM=0.245 ipTM=0.165 tol=7.48
2024-07-11 03:33:08,053 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=31.4 pTM=0.243 ipTM=0.164 tol=6.2
2024-07-11 03:33:26,312 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=30.9 pTM=0.243 ipTM=0.161 tol=8.03
2024-07-11 03:33:44,557 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=31.3 pTM=0.247 ipTM=0.175 tol=7.67
2024-07-11 03:34:02,806 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=31.4 pTM=0.247 ipTM=0.172 tol=4.29
2024-07-11 03:34:21,070 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=31.3 pTM=0.246 ipTM=0.175 tol=8.65
2024-07-11 03:34:39,313 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=31.3 pTM=0.245 ipTM=0.167 tol=7.58
2024-07-11 03:34:57,565 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=31.6 pTM=0.243 ipTM=0.174 tol=4.43
2024-07-11 03:35:15,804 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=31.2 pTM=0.248 ipTM=0.174 tol=4.12
2024-07-11 03:35:34,067 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=31.5 pTM=0.244 ipTM=0.171 tol=3.44
2024-07-11 03:35:52,332 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=31.3 pTM=0.244 ipTM=0.171 tol=4.59
2024-07-11 03:36:10,583 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=30.7 pTM=0.244 ipTM=0.172 tol=12.5
2024-07-11 03:36:28,827 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=31.5 pTM=0.247 ipTM=0.178 tol=10.7
2024-07-11 03:36:47,082 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=31.4 pTM=0.248 ipTM=0.181 tol=6.43
2024-07-11 03:37:05,334 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=30.8 pTM=0.247 ipTM=0.166 tol=14
2024-07-11 03:37:23,611 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=31.2 pTM=0.245 ipTM=0.176 tol=8.02
2024-07-11 03:37:41,868 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=31 pTM=0.249 ipTM=0.175 tol=7.92
2024-07-11 03:37:41,869 alphafold2_multimer_v3_model_4_seed_000 took 566.4s (30 recycles)
2024-07-11 03:38:00,791 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=31.4 pTM=0.22 ipTM=0.137
2024-07-11 03:38:19,162 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=32 pTM=0.226 ipTM=0.13 tol=19.6
2024-07-11 03:38:37,527 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=31.8 pTM=0.226 ipTM=0.135 tol=16.3
2024-07-11 03:38:55,900 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=32.3 pTM=0.225 ipTM=0.137 tol=11.1
2024-07-11 03:39:14,271 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=31.9 pTM=0.226 ipTM=0.135 tol=12.2
2024-07-11 03:39:32,640 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=31.8 pTM=0.227 ipTM=0.139 tol=12.5
2024-07-11 03:39:51,017 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=32.2 pTM=0.226 ipTM=0.136 tol=10
2024-07-11 03:40:09,389 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=32.4 pTM=0.225 ipTM=0.141 tol=10.6
2024-07-11 03:40:27,750 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=32.7 pTM=0.225 ipTM=0.139 tol=9.53
2024-07-11 03:40:46,108 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=32.4 pTM=0.226 ipTM=0.135 tol=8.52
2024-07-11 03:41:04,478 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=32.7 pTM=0.225 ipTM=0.134 tol=13.8
2024-07-11 03:41:22,824 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=32.6 pTM=0.225 ipTM=0.136 tol=12.6
2024-07-11 03:41:41,171 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=32.7 pTM=0.225 ipTM=0.136 tol=11
2024-07-11 03:41:59,533 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=32.7 pTM=0.225 ipTM=0.135 tol=12.9
2024-07-11 03:42:17,887 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=32.5 pTM=0.226 ipTM=0.137 tol=11.5
2024-07-11 03:42:36,255 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=32.9 pTM=0.225 ipTM=0.133 tol=9.6
2024-07-11 03:42:54,630 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=32.6 pTM=0.225 ipTM=0.133 tol=12.9
2024-07-11 03:43:13,010 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=32.9 pTM=0.226 ipTM=0.135 tol=10.5
2024-07-11 03:43:31,395 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=33.3 pTM=0.226 ipTM=0.134 tol=13
2024-07-11 03:43:49,763 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=33.1 pTM=0.226 ipTM=0.134 tol=9.42
2024-07-11 03:44:08,137 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=33.3 pTM=0.226 ipTM=0.135 tol=13.1
2024-07-11 03:44:26,514 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=33.4 pTM=0.224 ipTM=0.133 tol=7.11
2024-07-11 03:44:44,890 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=33.2 pTM=0.225 ipTM=0.135 tol=11.2
2024-07-11 03:45:03,258 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=33.7 pTM=0.224 ipTM=0.136 tol=11
2024-07-11 03:45:21,625 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=33.5 pTM=0.225 ipTM=0.136 tol=5.09
2024-07-11 03:45:39,980 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=33 pTM=0.225 ipTM=0.138 tol=11
2024-07-11 03:45:58,338 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=34.1 pTM=0.225 ipTM=0.135 tol=11.7
2024-07-11 03:46:16,673 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=33.3 pTM=0.226 ipTM=0.138 tol=12
2024-07-11 03:46:35,032 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=32.8 pTM=0.225 ipTM=0.134 tol=11.1
2024-07-11 03:46:53,389 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=33.8 pTM=0.225 ipTM=0.138 tol=9.93
2024-07-11 03:47:11,725 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=33.8 pTM=0.226 ipTM=0.139 tol=5.67
2024-07-11 03:47:11,726 alphafold2_multimer_v3_model_5_seed_000 took 569.3s (30 recycles)
2024-07-11 03:47:12,260 reranking models by 'multimer' metric
2024-07-11 03:47:15,393 Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
2024-07-11 03:48:28,826 Relaxation took 76.6s
2024-07-11 03:48:28,826 rank_001_alphafold2_multimer_v3_model_2_seed_000 pLDDT=32.2 pTM=0.231 ipTM=0.18
2024-07-11 03:49:56,299 Relaxation took 87.5s
2024-07-11 03:49:56,299 rank_002_alphafold2_multimer_v3_model_4_seed_000 pLDDT=31 pTM=0.249 ipTM=0.175
2024-07-11 03:51:31,492 Relaxation took 95.2s
2024-07-11 03:51:31,492 rank_003_alphafold2_multimer_v3_model_1_seed_000 pLDDT=29.8 pTM=0.236 ipTM=0.175
2024-07-11 03:53:24,736 Relaxation took 113.2s
2024-07-11 03:53:24,736 rank_004_alphafold2_multimer_v3_model_3_seed_000 pLDDT=33.6 pTM=0.233 ipTM=0.147
2024-07-11 03:55:05,917 Relaxation took 101.2s
2024-07-11 03:55:05,917 rank_005_alphafold2_multimer_v3_model_5_seed_000 pLDDT=33.8 pTM=0.226 ipTM=0.139
2024-07-11 03:55:07,532 Done