2024-07-11 03:55:42,994 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3)
2024-07-11 03:55:43,325 Running on GPU
2024-07-11 03:55:47,080 Found 6 citations for tools or databases
2024-07-11 03:55:47,080 Query 1/1: LHX1_RN141 (length 636)
2024-07-11 03:55:47,628 Sleeping for 7s. Reason: PENDING
2024-07-11 03:55:55,065 Sleeping for 5s. Reason: RUNNING
2024-07-11 03:56:00,489 Sleeping for 10s. Reason: RUNNING
2024-07-11 03:56:10,918 Sleeping for 6s. Reason: RUNNING
2024-07-11 03:56:17,359 Sleeping for 10s. Reason: RUNNING
2024-07-11 03:56:27,779 Sleeping for 5s. Reason: RUNNING
2024-07-11 03:56:33,200 Sleeping for 7s. Reason: RUNNING
2024-07-11 03:56:40,616 Sleeping for 5s. Reason: RUNNING
2024-07-11 03:56:46,031 Sleeping for 8s. Reason: RUNNING
2024-07-11 03:56:54,489 Sleeping for 8s. Reason: RUNNING
2024-07-11 03:57:02,898 Sleeping for 6s. Reason: RUNNING
2024-07-11 03:57:09,309 Sleeping for 9s. Reason: RUNNING
2024-07-11 03:57:18,708 Sleeping for 8s. Reason: RUNNING
2024-07-11 03:57:27,116 Sleeping for 9s. Reason: RUNNING
2024-07-11 03:57:36,527 Sleeping for 8s. Reason: RUNNING
2024-07-11 03:57:44,942 Sleeping for 5s. Reason: RUNNING
2024-07-11 03:57:50,345 Sleeping for 7s. Reason: RUNNING
2024-07-11 03:57:59,514 Sleeping for 6s. Reason: PENDING
2024-07-11 03:58:05,924 Sleeping for 6s. Reason: RUNNING
2024-07-11 03:58:12,325 Sleeping for 9s. Reason: RUNNING
2024-07-11 03:58:21,731 Sleeping for 10s. Reason: RUNNING
2024-07-11 03:58:32,146 Sleeping for 8s. Reason: RUNNING
2024-07-11 03:58:40,556 Sleeping for 7s. Reason: RUNNING
2024-07-11 03:58:47,951 Sleeping for 6s. Reason: RUNNING
2024-07-11 03:58:54,339 Sleeping for 9s. Reason: RUNNING
2024-07-11 03:59:03,803 Sleeping for 7s. Reason: RUNNING
2024-07-11 03:59:14,602 Setting max_seq=508, max_extra_seq=2048
2024-07-11 04:01:32,430 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=46.5 pTM=0.288 ipTM=0.258
2024-07-11 04:01:40,558 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=45.5 pTM=0.292 ipTM=0.172 tol=10.1
2024-07-11 04:01:48,685 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=45.5 pTM=0.292 ipTM=0.174 tol=4.88
2024-07-11 04:01:56,822 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=44.7 pTM=0.29 ipTM=0.173 tol=4.67
2024-07-11 04:02:04,966 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=45.5 pTM=0.293 ipTM=0.165 tol=3.93
2024-07-11 04:02:13,128 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=44.9 pTM=0.289 ipTM=0.165 tol=3.94
2024-07-11 04:02:21,284 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=44.8 pTM=0.291 ipTM=0.166 tol=3.87
2024-07-11 04:02:29,462 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=45.2 pTM=0.288 ipTM=0.163 tol=3.57
2024-07-11 04:02:37,632 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=45.2 pTM=0.294 ipTM=0.163 tol=5.38
2024-07-11 04:02:45,801 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=45.6 pTM=0.29 ipTM=0.168 tol=5.8
2024-07-11 04:02:53,970 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=45.4 pTM=0.293 ipTM=0.162 tol=2.69
2024-07-11 04:03:02,147 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=45.7 pTM=0.29 ipTM=0.157 tol=3.02
2024-07-11 04:03:10,332 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=45.5 pTM=0.295 ipTM=0.16 tol=2.77
2024-07-11 04:03:18,517 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=45.8 pTM=0.292 ipTM=0.15 tol=2.52
2024-07-11 04:03:26,683 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=44.7 pTM=0.295 ipTM=0.158 tol=3.23
2024-07-11 04:03:34,893 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=45.7 pTM=0.295 ipTM=0.155 tol=3.92
2024-07-11 04:03:43,092 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=45.5 pTM=0.297 ipTM=0.159 tol=3.23
2024-07-11 04:03:51,276 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=45.5 pTM=0.296 ipTM=0.166 tol=2
2024-07-11 04:03:59,463 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=45.3 pTM=0.296 ipTM=0.16 tol=1.57
2024-07-11 04:04:07,653 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=45.6 pTM=0.294 ipTM=0.159 tol=3.14
2024-07-11 04:04:15,841 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=45.2 pTM=0.298 ipTM=0.156 tol=3.06
2024-07-11 04:04:24,035 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=45.5 pTM=0.292 ipTM=0.16 tol=2.52
2024-07-11 04:04:32,216 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=45.3 pTM=0.296 ipTM=0.157 tol=3.36
2024-07-11 04:04:40,391 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=45.8 pTM=0.297 ipTM=0.161 tol=3.3
2024-07-11 04:04:48,582 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=45.4 pTM=0.298 ipTM=0.156 tol=1.75
2024-07-11 04:04:56,751 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=46 pTM=0.296 ipTM=0.163 tol=1.51
2024-07-11 04:05:04,946 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=45.8 pTM=0.296 ipTM=0.163 tol=3.37
2024-07-11 04:05:13,131 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=45.8 pTM=0.296 ipTM=0.166 tol=3.58
2024-07-11 04:05:21,323 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=45.5 pTM=0.298 ipTM=0.166 tol=2.51
2024-07-11 04:05:29,518 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=45.7 pTM=0.296 ipTM=0.16 tol=2.27
2024-07-11 04:05:37,706 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=45.6 pTM=0.297 ipTM=0.162 tol=1.64
2024-07-11 04:05:37,706 alphafold2_multimer_v3_model_1_seed_000 took 375.7s (30 recycles)
2024-07-11 04:05:46,174 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=49.8 pTM=0.313 ipTM=0.271
2024-07-11 04:05:54,407 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=48.4 pTM=0.299 ipTM=0.149 tol=14.9
2024-07-11 04:06:02,603 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=47.6 pTM=0.292 ipTM=0.143 tol=10.7
2024-07-11 04:06:10,802 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=50.3 pTM=0.313 ipTM=0.341 tol=9.95
2024-07-11 04:06:19,007 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=47.3 pTM=0.283 ipTM=0.185 tol=5.95
2024-07-11 04:06:27,209 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=47.1 pTM=0.282 ipTM=0.153 tol=5.45
2024-07-11 04:06:35,414 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=46 pTM=0.281 ipTM=0.172 tol=4.06
2024-07-11 04:06:43,615 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=47.2 pTM=0.28 ipTM=0.188 tol=3.6
2024-07-11 04:06:51,827 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=46.9 pTM=0.275 ipTM=0.176 tol=2.72
2024-07-11 04:07:00,019 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=47.6 pTM=0.278 ipTM=0.187 tol=2.79
2024-07-11 04:07:08,232 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=46.7 pTM=0.297 ipTM=0.209 tol=14.8
2024-07-11 04:07:16,432 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=47.3 pTM=0.3 ipTM=0.179 tol=5.89
2024-07-11 04:07:24,625 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=46.6 pTM=0.301 ipTM=0.203 tol=9.82
2024-07-11 04:07:32,795 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=48.8 pTM=0.304 ipTM=0.249 tol=7.37
2024-07-11 04:07:40,997 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=46.8 pTM=0.294 ipTM=0.193 tol=7.94
2024-07-11 04:07:49,195 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=48 pTM=0.298 ipTM=0.194 tol=6.38
2024-07-11 04:07:57,399 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=47.2 pTM=0.295 ipTM=0.195 tol=4.06
2024-07-11 04:08:05,610 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=47.5 pTM=0.295 ipTM=0.172 tol=11.3
2024-07-11 04:08:13,813 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=47 pTM=0.295 ipTM=0.224 tol=4.09
2024-07-11 04:08:22,024 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=47.1 pTM=0.299 ipTM=0.193 tol=7.14
2024-07-11 04:08:30,229 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=46.3 pTM=0.294 ipTM=0.167 tol=5.88
2024-07-11 04:08:38,437 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=46.6 pTM=0.292 ipTM=0.189 tol=3.39
2024-07-11 04:08:46,617 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=47.8 pTM=0.298 ipTM=0.184 tol=2.94
2024-07-11 04:08:54,806 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=47 pTM=0.296 ipTM=0.196 tol=3.79
2024-07-11 04:09:02,995 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=47.4 pTM=0.295 ipTM=0.18 tol=2.96
2024-07-11 04:09:11,177 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=46.5 pTM=0.293 ipTM=0.176 tol=2.17
2024-07-11 04:09:19,376 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=47.6 pTM=0.296 ipTM=0.167 tol=2.79
2024-07-11 04:09:27,572 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=47 pTM=0.296 ipTM=0.208 tol=5.63
2024-07-11 04:09:35,768 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=48.2 pTM=0.299 ipTM=0.204 tol=5.31
2024-07-11 04:09:43,966 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=46.7 pTM=0.293 ipTM=0.176 tol=2.08
2024-07-11 04:09:52,165 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=47.6 pTM=0.297 ipTM=0.167 tol=2.08
2024-07-11 04:09:52,166 alphafold2_multimer_v3_model_2_seed_000 took 254.2s (30 recycles)
2024-07-11 04:10:00,663 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=47.1 pTM=0.289 ipTM=0.191
2024-07-11 04:10:08,893 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=47.8 pTM=0.288 ipTM=0.23 tol=19.3
2024-07-11 04:10:17,136 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=46.8 pTM=0.286 ipTM=0.194 tol=6.9
2024-07-11 04:10:25,377 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=50.3 pTM=0.311 ipTM=0.324 tol=3.73
2024-07-11 04:10:33,624 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=46.7 pTM=0.284 ipTM=0.196 tol=3.98
2024-07-11 04:10:41,876 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=48 pTM=0.285 ipTM=0.249 tol=3.27
2024-07-11 04:10:50,122 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=47 pTM=0.285 ipTM=0.192 tol=4.86
2024-07-11 04:10:58,383 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=47.2 pTM=0.286 ipTM=0.172 tol=10.3
2024-07-11 04:11:06,639 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=47.1 pTM=0.284 ipTM=0.192 tol=6.43
2024-07-11 04:11:14,883 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=49.8 pTM=0.293 ipTM=0.298 tol=5.08
2024-07-11 04:11:23,131 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=47.5 pTM=0.284 ipTM=0.193 tol=5.16
2024-07-11 04:11:31,380 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=47.5 pTM=0.29 ipTM=0.205 tol=5.72
2024-07-11 04:11:39,626 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=47.9 pTM=0.289 ipTM=0.226 tol=4.57
2024-07-11 04:11:47,874 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=46.8 pTM=0.288 ipTM=0.194 tol=5.83
2024-07-11 04:11:56,115 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=51.1 pTM=0.317 ipTM=0.35 tol=7.27
2024-07-11 04:12:04,365 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=47.2 pTM=0.285 ipTM=0.206 tol=7.14
2024-07-11 04:12:12,607 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=50.2 pTM=0.299 ipTM=0.32 tol=4.24
2024-07-11 04:12:20,855 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=46.7 pTM=0.286 ipTM=0.184 tol=3.98
2024-07-11 04:12:29,110 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=47 pTM=0.29 ipTM=0.174 tol=14.6
2024-07-11 04:12:37,349 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=47.4 pTM=0.292 ipTM=0.213 tol=14.9
2024-07-11 04:12:45,578 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=46.9 pTM=0.297 ipTM=0.204 tol=8.3
2024-07-11 04:12:53,806 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=50 pTM=0.301 ipTM=0.296 tol=5.91
2024-07-11 04:13:02,029 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=47.5 pTM=0.296 ipTM=0.219 tol=6.89
2024-07-11 04:13:10,264 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=48.7 pTM=0.299 ipTM=0.251 tol=10.8
2024-07-11 04:13:18,496 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=47.8 pTM=0.292 ipTM=0.234 tol=7.36
2024-07-11 04:13:26,717 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=48.1 pTM=0.293 ipTM=0.237 tol=7.18
2024-07-11 04:13:34,939 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=46.9 pTM=0.289 ipTM=0.195 tol=5.89
2024-07-11 04:13:43,175 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=49.1 pTM=0.295 ipTM=0.28 tol=4.96
2024-07-11 04:13:51,410 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=47.6 pTM=0.292 ipTM=0.203 tol=8.12
2024-07-11 04:13:59,639 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=48.2 pTM=0.296 ipTM=0.219 tol=5.01
2024-07-11 04:14:07,855 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=48.9 pTM=0.3 ipTM=0.277 tol=4.49
2024-07-11 04:14:07,855 alphafold2_multimer_v3_model_3_seed_000 took 255.4s (30 recycles)
2024-07-11 04:14:16,315 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=51 pTM=0.392 ipTM=0.474
2024-07-11 04:14:24,545 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=47.2 pTM=0.293 ipTM=0.182 tol=14.8
2024-07-11 04:14:32,774 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=45.6 pTM=0.291 ipTM=0.172 tol=11.2
2024-07-11 04:14:40,980 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=45.4 pTM=0.288 ipTM=0.162 tol=11.1
2024-07-11 04:14:49,202 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=45.4 pTM=0.288 ipTM=0.156 tol=10.1
2024-07-11 04:14:57,427 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=46.1 pTM=0.291 ipTM=0.158 tol=6.34
2024-07-11 04:15:05,639 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=46.5 pTM=0.289 ipTM=0.152 tol=9.78
2024-07-11 04:15:13,865 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=46.9 pTM=0.293 ipTM=0.161 tol=9.16
2024-07-11 04:15:22,087 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=47.8 pTM=0.292 ipTM=0.16 tol=6.51
2024-07-11 04:15:30,315 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=47.4 pTM=0.292 ipTM=0.161 tol=6.81
2024-07-11 04:15:38,545 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=47.5 pTM=0.292 ipTM=0.156 tol=4.66
2024-07-11 04:15:46,762 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=47 pTM=0.295 ipTM=0.162 tol=5.38
2024-07-11 04:15:54,977 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=47.3 pTM=0.297 ipTM=0.154 tol=4.17
2024-07-11 04:16:03,208 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=46.9 pTM=0.295 ipTM=0.155 tol=5.43
2024-07-11 04:16:11,423 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=47.2 pTM=0.295 ipTM=0.154 tol=8.09
2024-07-11 04:16:19,651 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=47.2 pTM=0.293 ipTM=0.17 tol=4.28
2024-07-11 04:16:27,863 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=47.2 pTM=0.294 ipTM=0.155 tol=4.38
2024-07-11 04:16:36,089 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=47.4 pTM=0.3 ipTM=0.174 tol=6.06
2024-07-11 04:16:44,314 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=47.2 pTM=0.292 ipTM=0.162 tol=5.66
2024-07-11 04:16:52,532 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=47.5 pTM=0.293 ipTM=0.16 tol=6.46
2024-07-11 04:17:00,762 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=47.4 pTM=0.297 ipTM=0.173 tol=10.3
2024-07-11 04:17:08,997 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=47.3 pTM=0.293 ipTM=0.165 tol=10.8
2024-07-11 04:17:17,222 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=47.4 pTM=0.294 ipTM=0.164 tol=14.3
2024-07-11 04:17:25,451 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=46.9 pTM=0.296 ipTM=0.173 tol=17.2
2024-07-11 04:17:33,685 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=45.8 pTM=0.289 ipTM=0.163 tol=8.84
2024-07-11 04:17:41,914 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=46.6 pTM=0.296 ipTM=0.163 tol=8.02
2024-07-11 04:17:50,141 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=47.2 pTM=0.292 ipTM=0.154 tol=5.21
2024-07-11 04:17:58,375 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=47.4 pTM=0.294 ipTM=0.174 tol=13.4
2024-07-11 04:18:06,597 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=46.3 pTM=0.289 ipTM=0.167 tol=12
2024-07-11 04:18:14,816 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=46.4 pTM=0.292 ipTM=0.165 tol=6.02
2024-07-11 04:18:23,049 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=46.8 pTM=0.291 ipTM=0.159 tol=3.96
2024-07-11 04:18:23,050 alphafold2_multimer_v3_model_4_seed_000 took 254.9s (30 recycles)
2024-07-11 04:18:31,567 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=48 pTM=0.285 ipTM=0.18
2024-07-11 04:18:39,834 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=45.8 pTM=0.281 ipTM=0.159 tol=14.3
2024-07-11 04:18:48,075 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=46.6 pTM=0.284 ipTM=0.152 tol=12.5
2024-07-11 04:18:56,336 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=45.9 pTM=0.286 ipTM=0.157 tol=15
2024-07-11 04:19:04,579 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=47.5 pTM=0.285 ipTM=0.156 tol=11.6
2024-07-11 04:19:12,830 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=47.2 pTM=0.286 ipTM=0.149 tol=8.15
2024-07-11 04:19:21,086 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=47.6 pTM=0.286 ipTM=0.156 tol=9.37
2024-07-11 04:19:29,332 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=48.1 pTM=0.288 ipTM=0.219 tol=8.29
2024-07-11 04:19:37,576 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=47.9 pTM=0.292 ipTM=0.179 tol=4.84
2024-07-11 04:19:45,804 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=47.6 pTM=0.29 ipTM=0.165 tol=7.05
2024-07-11 04:19:54,053 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=46.9 pTM=0.29 ipTM=0.181 tol=9.64
2024-07-11 04:20:02,298 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=48.6 pTM=0.303 ipTM=0.235 tol=6.32
2024-07-11 04:20:10,546 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=48.3 pTM=0.3 ipTM=0.191 tol=9.06
2024-07-11 04:20:18,777 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=48.3 pTM=0.297 ipTM=0.183 tol=6.74
2024-07-11 04:20:27,005 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=47.7 pTM=0.308 ipTM=0.209 tol=7.58
2024-07-11 04:20:35,249 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=46.9 pTM=0.294 ipTM=0.185 tol=7.99
2024-07-11 04:20:43,491 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=47.6 pTM=0.297 ipTM=0.208 tol=3.17
2024-07-11 04:20:51,736 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=47.5 pTM=0.293 ipTM=0.17 tol=7.73
2024-07-11 04:20:59,970 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=47.8 pTM=0.296 ipTM=0.176 tol=4.04
2024-07-11 04:21:08,213 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=49.8 pTM=0.294 ipTM=0.298 tol=7.13
2024-07-11 04:21:16,462 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=47.6 pTM=0.292 ipTM=0.195 tol=4.54
2024-07-11 04:21:24,699 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=48.2 pTM=0.302 ipTM=0.228 tol=4.2
2024-07-11 04:21:32,926 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=47.4 pTM=0.303 ipTM=0.202 tol=5.1
2024-07-11 04:21:41,172 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=48.2 pTM=0.298 ipTM=0.181 tol=5.36
2024-07-11 04:21:49,415 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=49.5 pTM=0.304 ipTM=0.291 tol=7.38
2024-07-11 04:21:57,655 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=48.2 pTM=0.3 ipTM=0.215 tol=7.8
2024-07-11 04:22:05,899 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=47.8 pTM=0.294 ipTM=0.18 tol=2.83
2024-07-11 04:22:14,156 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=47.6 pTM=0.294 ipTM=0.191 tol=1.73
2024-07-11 04:22:22,407 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=48 pTM=0.302 ipTM=0.189 tol=4.14
2024-07-11 04:22:30,664 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=48.3 pTM=0.302 ipTM=0.197 tol=5.57
2024-07-11 04:22:38,911 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=47.8 pTM=0.302 ipTM=0.212 tol=2.95
2024-07-11 04:22:38,912 alphafold2_multimer_v3_model_5_seed_000 took 255.6s (30 recycles)
2024-07-11 04:22:39,176 reranking models by 'multimer' metric
2024-07-11 04:22:39,927 Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
2024-07-11 04:23:20,477 Relaxation took 41.3s
2024-07-11 04:23:20,477 rank_001_alphafold2_multimer_v3_model_3_seed_000 pLDDT=48.9 pTM=0.3 ipTM=0.277
2024-07-11 04:24:01,733 Relaxation took 41.3s
2024-07-11 04:24:01,734 rank_002_alphafold2_multimer_v3_model_5_seed_000 pLDDT=47.8 pTM=0.302 ipTM=0.212
2024-07-11 04:24:51,972 Relaxation took 50.2s
2024-07-11 04:24:51,972 rank_003_alphafold2_multimer_v3_model_2_seed_000 pLDDT=47.6 pTM=0.297 ipTM=0.167
2024-07-11 04:25:36,839 Relaxation took 44.9s
2024-07-11 04:25:36,839 rank_004_alphafold2_multimer_v3_model_1_seed_000 pLDDT=45.6 pTM=0.297 ipTM=0.162
2024-07-11 04:26:18,822 Relaxation took 42.0s
2024-07-11 04:26:18,822 rank_005_alphafold2_multimer_v3_model_4_seed_000 pLDDT=46.8 pTM=0.291 ipTM=0.159
2024-07-11 04:26:20,064 Done