2024-07-11 04:05:59,961 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3)
2024-07-11 04:06:00,293 Running on GPU
2024-07-11 04:06:02,897 Found 6 citations for tools or databases
2024-07-11 04:06:02,897 Query 1/1: LN28B_COMD4 (length 449)
2024-07-11 04:06:03,341 Sleeping for 6s. Reason: PENDING
2024-07-11 04:06:09,770 Sleeping for 5s. Reason: RUNNING
2024-07-11 04:06:15,192 Sleeping for 8s. Reason: RUNNING
2024-07-11 04:06:23,591 Sleeping for 6s. Reason: RUNNING
2024-07-11 04:06:30,005 Sleeping for 5s. Reason: RUNNING
2024-07-11 04:06:35,411 Sleeping for 5s. Reason: RUNNING
2024-07-11 04:06:40,814 Sleeping for 10s. Reason: RUNNING
2024-07-11 04:06:51,234 Sleeping for 7s. Reason: RUNNING
2024-07-11 04:06:58,654 Sleeping for 7s. Reason: RUNNING
2024-07-11 04:07:06,054 Sleeping for 10s. Reason: RUNNING
2024-07-11 04:07:18,136 Sleeping for 8s. Reason: PENDING
2024-07-11 04:07:26,568 Sleeping for 8s. Reason: RUNNING
2024-07-11 04:07:34,975 Sleeping for 10s. Reason: RUNNING
2024-07-11 04:07:45,379 Sleeping for 8s. Reason: RUNNING
2024-07-11 04:07:55,873 Setting max_seq=508, max_extra_seq=2048
2024-07-11 04:10:51,707 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=60.5 pTM=0.341 ipTM=0.099
2024-07-11 04:10:56,245 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=59.5 pTM=0.337 ipTM=0.112 tol=8.16
2024-07-11 04:11:00,787 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=59.7 pTM=0.339 ipTM=0.121 tol=6.22
2024-07-11 04:11:05,325 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=59.9 pTM=0.343 ipTM=0.128 tol=7.41
2024-07-11 04:11:09,860 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=59.9 pTM=0.344 ipTM=0.13 tol=1.86
2024-07-11 04:11:14,396 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=59.6 pTM=0.343 ipTM=0.128 tol=1.22
2024-07-11 04:11:18,935 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=60.1 pTM=0.345 ipTM=0.129 tol=1.88
2024-07-11 04:11:23,470 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=59.5 pTM=0.343 ipTM=0.13 tol=1.69
2024-07-11 04:11:28,007 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=59.2 pTM=0.34 ipTM=0.128 tol=1.12
2024-07-11 04:11:32,539 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=59.7 pTM=0.347 ipTM=0.143 tol=1.78
2024-07-11 04:11:37,075 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=60.2 pTM=0.345 ipTM=0.136 tol=1.15
2024-07-11 04:11:41,610 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=60.2 pTM=0.344 ipTM=0.132 tol=1.18
2024-07-11 04:11:46,147 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=60.3 pTM=0.344 ipTM=0.136 tol=1.3
2024-07-11 04:11:50,684 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=60.3 pTM=0.346 ipTM=0.133 tol=1.8
2024-07-11 04:11:55,221 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=60.3 pTM=0.347 ipTM=0.139 tol=1.95
2024-07-11 04:11:59,758 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=60.3 pTM=0.347 ipTM=0.138 tol=1.6
2024-07-11 04:12:04,296 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=60.4 pTM=0.344 ipTM=0.132 tol=1.46
2024-07-11 04:12:08,835 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=60.8 pTM=0.345 ipTM=0.128 tol=2.04
2024-07-11 04:12:13,374 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=60.2 pTM=0.345 ipTM=0.131 tol=2.38
2024-07-11 04:12:17,910 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=59.8 pTM=0.346 ipTM=0.133 tol=2.08
2024-07-11 04:12:22,444 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=59.9 pTM=0.346 ipTM=0.137 tol=1.76
2024-07-11 04:12:26,978 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=59.4 pTM=0.346 ipTM=0.142 tol=2.61
2024-07-11 04:12:31,515 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=59.5 pTM=0.345 ipTM=0.13 tol=3.53
2024-07-11 04:12:36,055 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=59.6 pTM=0.349 ipTM=0.141 tol=3.52
2024-07-11 04:12:40,595 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=59.5 pTM=0.343 ipTM=0.133 tol=2.56
2024-07-11 04:12:45,136 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=59.2 pTM=0.344 ipTM=0.132 tol=2.13
2024-07-11 04:12:49,675 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=60.2 pTM=0.344 ipTM=0.136 tol=1.39
2024-07-11 04:12:54,219 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=59.8 pTM=0.342 ipTM=0.129 tol=1.91
2024-07-11 04:12:58,765 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=59.3 pTM=0.341 ipTM=0.137 tol=1.55
2024-07-11 04:13:03,311 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=60.1 pTM=0.346 ipTM=0.143 tol=0.998
2024-07-11 04:13:07,852 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=59.8 pTM=0.346 ipTM=0.14 tol=1.03
2024-07-11 04:13:07,853 alphafold2_multimer_v3_model_1_seed_000 took 305.6s (30 recycles)
2024-07-11 04:13:12,548 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=61.2 pTM=0.335 ipTM=0.097
2024-07-11 04:13:17,102 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=62 pTM=0.34 ipTM=0.115 tol=13
2024-07-11 04:13:21,663 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=63.3 pTM=0.343 ipTM=0.104 tol=9.62
2024-07-11 04:13:26,219 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=63.3 pTM=0.341 ipTM=0.104 tol=7.4
2024-07-11 04:13:30,773 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=63 pTM=0.342 ipTM=0.107 tol=6.13
2024-07-11 04:13:35,328 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=62.9 pTM=0.342 ipTM=0.111 tol=6.49
2024-07-11 04:13:39,883 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=63.5 pTM=0.346 ipTM=0.111 tol=3.67
2024-07-11 04:13:44,441 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=63.8 pTM=0.345 ipTM=0.108 tol=1.95
2024-07-11 04:13:48,995 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=63.5 pTM=0.344 ipTM=0.104 tol=2.09
2024-07-11 04:13:53,549 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=63.8 pTM=0.344 ipTM=0.106 tol=2.4
2024-07-11 04:13:58,105 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=63.3 pTM=0.344 ipTM=0.105 tol=1.23
2024-07-11 04:14:02,655 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=63.2 pTM=0.342 ipTM=0.106 tol=3.24
2024-07-11 04:14:07,211 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=63.8 pTM=0.347 ipTM=0.104 tol=2.31
2024-07-11 04:14:11,765 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=62.6 pTM=0.338 ipTM=0.0988 tol=2.02
2024-07-11 04:14:16,319 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=62.8 pTM=0.337 ipTM=0.1 tol=2.27
2024-07-11 04:14:20,875 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=62.9 pTM=0.337 ipTM=0.0997 tol=3.24
2024-07-11 04:14:25,431 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=63.4 pTM=0.34 ipTM=0.0992 tol=2.28
2024-07-11 04:14:29,987 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=63.7 pTM=0.34 ipTM=0.0989 tol=4.04
2024-07-11 04:14:34,541 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=63.1 pTM=0.339 ipTM=0.1 tol=9.62
2024-07-11 04:14:39,093 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=62.9 pTM=0.339 ipTM=0.0988 tol=2.92
2024-07-11 04:14:43,648 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=62.3 pTM=0.34 ipTM=0.101 tol=6.53
2024-07-11 04:14:48,203 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=62.5 pTM=0.34 ipTM=0.097 tol=4.44
2024-07-11 04:14:52,761 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=62.1 pTM=0.337 ipTM=0.1 tol=4.52
2024-07-11 04:14:57,317 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=62.1 pTM=0.338 ipTM=0.103 tol=4.49
2024-07-11 04:15:01,877 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=62.7 pTM=0.338 ipTM=0.1 tol=6.7
2024-07-11 04:15:06,433 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=62 pTM=0.335 ipTM=0.102 tol=4.17
2024-07-11 04:15:10,989 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=62.2 pTM=0.335 ipTM=0.0992 tol=2.81
2024-07-11 04:15:15,547 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=62.3 pTM=0.335 ipTM=0.1 tol=4.33
2024-07-11 04:15:20,112 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=61.9 pTM=0.334 ipTM=0.0992 tol=1.53
2024-07-11 04:15:24,669 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=62.4 pTM=0.334 ipTM=0.103 tol=2.54
2024-07-11 04:15:29,229 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=62.4 pTM=0.335 ipTM=0.0995 tol=7.27
2024-07-11 04:15:29,230 alphafold2_multimer_v3_model_2_seed_000 took 141.2s (30 recycles)
2024-07-11 04:15:33,952 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=62.7 pTM=0.335 ipTM=0.0998
2024-07-11 04:15:38,518 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=62.2 pTM=0.349 ipTM=0.124 tol=10
2024-07-11 04:15:43,084 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=63.1 pTM=0.355 ipTM=0.139 tol=7.92
2024-07-11 04:15:47,649 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=62.7 pTM=0.354 ipTM=0.146 tol=2.42
2024-07-11 04:15:52,212 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=62.8 pTM=0.359 ipTM=0.14 tol=3.07
2024-07-11 04:15:56,781 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=63 pTM=0.358 ipTM=0.147 tol=1.6
2024-07-11 04:16:01,347 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=62.9 pTM=0.359 ipTM=0.143 tol=3.73
2024-07-11 04:16:05,914 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=63.2 pTM=0.363 ipTM=0.164 tol=2.69
2024-07-11 04:16:10,481 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=63.3 pTM=0.355 ipTM=0.146 tol=2.37
2024-07-11 04:16:15,050 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=63.5 pTM=0.361 ipTM=0.172 tol=3.74
2024-07-11 04:16:19,615 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=63.2 pTM=0.36 ipTM=0.159 tol=1.87
2024-07-11 04:16:24,182 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=63.2 pTM=0.357 ipTM=0.155 tol=2.09
2024-07-11 04:16:28,750 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=63.2 pTM=0.356 ipTM=0.151 tol=4.88
2024-07-11 04:16:33,319 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=63.6 pTM=0.359 ipTM=0.155 tol=2.61
2024-07-11 04:16:37,886 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=63.1 pTM=0.355 ipTM=0.15 tol=2.77
2024-07-11 04:16:42,456 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=63.5 pTM=0.36 ipTM=0.153 tol=2.48
2024-07-11 04:16:47,026 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=63.6 pTM=0.357 ipTM=0.151 tol=2.69
2024-07-11 04:16:51,590 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=64.1 pTM=0.354 ipTM=0.141 tol=4.27
2024-07-11 04:16:56,155 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=63.5 pTM=0.354 ipTM=0.141 tol=4.12
2024-07-11 04:17:00,723 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=63.6 pTM=0.356 ipTM=0.156 tol=3.06
2024-07-11 04:17:05,291 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=63.8 pTM=0.358 ipTM=0.152 tol=2.45
2024-07-11 04:17:09,858 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=63.6 pTM=0.36 ipTM=0.153 tol=2.93
2024-07-11 04:17:14,425 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=63.4 pTM=0.357 ipTM=0.148 tol=3.92
2024-07-11 04:17:18,997 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=63.4 pTM=0.356 ipTM=0.142 tol=6.6
2024-07-11 04:17:23,568 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=64.2 pTM=0.354 ipTM=0.135 tol=8.3
2024-07-11 04:17:28,136 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=63.2 pTM=0.352 ipTM=0.135 tol=4.74
2024-07-11 04:17:32,704 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=63.4 pTM=0.354 ipTM=0.14 tol=2.34
2024-07-11 04:17:37,275 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=63.8 pTM=0.352 ipTM=0.13 tol=2.49
2024-07-11 04:17:41,848 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=63.7 pTM=0.355 ipTM=0.132 tol=2
2024-07-11 04:17:46,412 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=63.8 pTM=0.358 ipTM=0.137 tol=2.48
2024-07-11 04:17:50,981 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=64.2 pTM=0.359 ipTM=0.142 tol=3.69
2024-07-11 04:17:50,981 alphafold2_multimer_v3_model_3_seed_000 took 141.6s (30 recycles)
2024-07-11 04:17:55,694 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=59.8 pTM=0.323 ipTM=0.0894
2024-07-11 04:18:00,251 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=58.6 pTM=0.331 ipTM=0.101 tol=10.9
2024-07-11 04:18:04,812 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=59.7 pTM=0.34 ipTM=0.121 tol=9.25
2024-07-11 04:18:09,367 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=61.3 pTM=0.351 ipTM=0.136 tol=5.81
2024-07-11 04:18:13,920 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=61.8 pTM=0.352 ipTM=0.137 tol=4.39
2024-07-11 04:18:18,474 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=62.1 pTM=0.347 ipTM=0.128 tol=3.52
2024-07-11 04:18:23,030 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=62 pTM=0.344 ipTM=0.124 tol=1.71
2024-07-11 04:18:27,586 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=62.1 pTM=0.348 ipTM=0.137 tol=3.39
2024-07-11 04:18:32,147 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=61.8 pTM=0.342 ipTM=0.117 tol=2.41
2024-07-11 04:18:36,702 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=62.1 pTM=0.348 ipTM=0.146 tol=6.08
2024-07-11 04:18:41,263 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=62.8 pTM=0.342 ipTM=0.128 tol=5.08
2024-07-11 04:18:45,823 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=62.3 pTM=0.344 ipTM=0.137 tol=7.1
2024-07-11 04:18:50,382 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=62.7 pTM=0.343 ipTM=0.125 tol=4.8
2024-07-11 04:18:54,946 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=62.4 pTM=0.347 ipTM=0.137 tol=4.5
2024-07-11 04:18:59,509 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=62.4 pTM=0.341 ipTM=0.12 tol=6.09
2024-07-11 04:19:04,073 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=62.2 pTM=0.339 ipTM=0.13 tol=5.89
2024-07-11 04:19:08,635 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=62.8 pTM=0.343 ipTM=0.125 tol=4.74
2024-07-11 04:19:13,196 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=63.4 pTM=0.347 ipTM=0.137 tol=2.85
2024-07-11 04:19:17,755 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=62.6 pTM=0.341 ipTM=0.116 tol=3.65
2024-07-11 04:19:22,309 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=62 pTM=0.345 ipTM=0.137 tol=2.89
2024-07-11 04:19:26,867 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=62.8 pTM=0.348 ipTM=0.142 tol=2.94
2024-07-11 04:19:31,426 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=63 pTM=0.346 ipTM=0.124 tol=3.68
2024-07-11 04:19:35,980 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=62.2 pTM=0.343 ipTM=0.123 tol=3.41
2024-07-11 04:19:40,536 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=62.7 pTM=0.344 ipTM=0.122 tol=5.9
2024-07-11 04:19:45,099 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=62.5 pTM=0.343 ipTM=0.122 tol=5.39
2024-07-11 04:19:49,659 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=62.1 pTM=0.339 ipTM=0.119 tol=4.49
2024-07-11 04:19:54,218 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=62.2 pTM=0.345 ipTM=0.133 tol=4.78
2024-07-11 04:19:58,782 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=62.4 pTM=0.341 ipTM=0.132 tol=6.52
2024-07-11 04:20:03,341 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=62.2 pTM=0.342 ipTM=0.127 tol=2.87
2024-07-11 04:20:07,901 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=62.7 pTM=0.344 ipTM=0.131 tol=3.4
2024-07-11 04:20:12,457 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=62.4 pTM=0.344 ipTM=0.134 tol=5.64
2024-07-11 04:20:12,458 alphafold2_multimer_v3_model_4_seed_000 took 141.3s (30 recycles)
2024-07-11 04:20:17,178 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=60 pTM=0.329 ipTM=0.105
2024-07-11 04:20:21,750 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=62.6 pTM=0.338 ipTM=0.108 tol=6.46
2024-07-11 04:20:26,320 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=63.2 pTM=0.339 ipTM=0.114 tol=4.83
2024-07-11 04:20:30,887 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=63.2 pTM=0.337 ipTM=0.109 tol=2.89
2024-07-11 04:20:35,457 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=63.2 pTM=0.338 ipTM=0.109 tol=2.21
2024-07-11 04:20:40,027 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=62.8 pTM=0.336 ipTM=0.108 tol=2.76
2024-07-11 04:20:44,598 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=63.3 pTM=0.339 ipTM=0.105 tol=3.24
2024-07-11 04:20:49,168 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=63.5 pTM=0.342 ipTM=0.11 tol=11.1
2024-07-11 04:20:53,737 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=63.2 pTM=0.336 ipTM=0.105 tol=10.5
2024-07-11 04:20:58,310 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=63.2 pTM=0.336 ipTM=0.107 tol=6.5
2024-07-11 04:21:02,883 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=63.2 pTM=0.336 ipTM=0.108 tol=8
2024-07-11 04:21:07,453 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=63.2 pTM=0.336 ipTM=0.11 tol=4.29
2024-07-11 04:21:12,022 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=63.1 pTM=0.335 ipTM=0.11 tol=7.44
2024-07-11 04:21:16,595 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=63.2 pTM=0.339 ipTM=0.107 tol=3.79
2024-07-11 04:21:21,164 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=63.2 pTM=0.333 ipTM=0.107 tol=2.72
2024-07-11 04:21:25,738 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=63.3 pTM=0.338 ipTM=0.109 tol=3.1
2024-07-11 04:21:30,314 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=63.7 pTM=0.339 ipTM=0.108 tol=3.2
2024-07-11 04:21:34,884 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=63.6 pTM=0.339 ipTM=0.107 tol=1.84
2024-07-11 04:21:39,459 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=63.4 pTM=0.337 ipTM=0.105 tol=5.91
2024-07-11 04:21:44,032 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=62.3 pTM=0.333 ipTM=0.106 tol=2.15
2024-07-11 04:21:48,605 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=63.2 pTM=0.341 ipTM=0.113 tol=5.66
2024-07-11 04:21:53,182 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=63.5 pTM=0.343 ipTM=0.115 tol=3.42
2024-07-11 04:21:57,750 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=63 pTM=0.34 ipTM=0.112 tol=2.46
2024-07-11 04:22:02,323 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=63.2 pTM=0.344 ipTM=0.117 tol=1.71
2024-07-11 04:22:06,899 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=63.7 pTM=0.344 ipTM=0.112 tol=3.85
2024-07-11 04:22:11,477 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=63.2 pTM=0.336 ipTM=0.106 tol=1.45
2024-07-11 04:22:16,060 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=62.9 pTM=0.337 ipTM=0.106 tol=1.53
2024-07-11 04:22:20,634 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=63 pTM=0.334 ipTM=0.108 tol=1.45
2024-07-11 04:22:25,215 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=63.1 pTM=0.338 ipTM=0.109 tol=2.01
2024-07-11 04:22:29,792 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=63.2 pTM=0.338 ipTM=0.114 tol=4.37
2024-07-11 04:22:34,370 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=63 pTM=0.339 ipTM=0.112 tol=10.2
2024-07-11 04:22:34,371 alphafold2_multimer_v3_model_5_seed_000 took 141.8s (30 recycles)
2024-07-11 04:22:34,518 reranking models by 'multimer' metric
2024-07-11 04:22:37,283 Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
2024-07-11 04:23:03,420 Relaxation took 28.9s
2024-07-11 04:23:03,420 rank_001_alphafold2_multimer_v3_model_3_seed_000 pLDDT=64.2 pTM=0.359 ipTM=0.142
2024-07-11 04:23:26,243 Relaxation took 22.8s
2024-07-11 04:23:26,243 rank_002_alphafold2_multimer_v3_model_1_seed_000 pLDDT=59.8 pTM=0.346 ipTM=0.14
2024-07-11 04:23:46,828 Relaxation took 20.6s
2024-07-11 04:23:46,828 rank_003_alphafold2_multimer_v3_model_4_seed_000 pLDDT=62.4 pTM=0.344 ipTM=0.134
2024-07-11 04:24:07,975 Relaxation took 21.1s
2024-07-11 04:24:07,975 rank_004_alphafold2_multimer_v3_model_5_seed_000 pLDDT=63 pTM=0.339 ipTM=0.112
2024-07-11 04:24:29,177 Relaxation took 21.2s
2024-07-11 04:24:29,177 rank_005_alphafold2_multimer_v3_model_2_seed_000 pLDDT=62.4 pTM=0.335 ipTM=0.0995
2024-07-11 04:24:30,212 Done