2024-07-11 04:09:00,739 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3)
2024-07-11 04:09:01,070 Running on GPU
2024-07-11 04:09:04,613 Found 6 citations for tools or databases
2024-07-11 04:09:04,613 Query 1/1: LONF3_EP15R (length 1623)
2024-07-11 04:09:05,040 Sleeping for 5s. Reason: PENDING
2024-07-11 04:09:10,452 Sleeping for 8s. Reason: RUNNING
2024-07-11 04:09:18,867 Sleeping for 6s. Reason: RUNNING
2024-07-11 04:09:25,286 Sleeping for 8s. Reason: RUNNING
2024-07-11 04:09:33,708 Sleeping for 7s. Reason: RUNNING
2024-07-11 04:09:41,105 Sleeping for 9s. Reason: RUNNING
2024-07-11 04:09:50,512 Sleeping for 10s. Reason: RUNNING
2024-07-11 04:10:00,924 Sleeping for 5s. Reason: RUNNING
2024-07-11 04:10:06,330 Sleeping for 7s. Reason: RUNNING
2024-07-11 04:10:13,741 Sleeping for 10s. Reason: RUNNING
2024-07-11 04:10:24,145 Sleeping for 5s. Reason: RUNNING
2024-07-11 04:10:29,557 Sleeping for 5s. Reason: RUNNING
2024-07-11 04:10:34,948 Sleeping for 7s. Reason: RUNNING
2024-07-11 04:10:42,399 Sleeping for 5s. Reason: RUNNING
2024-07-11 04:10:47,805 Sleeping for 7s. Reason: RUNNING
2024-07-11 04:10:55,213 Sleeping for 5s. Reason: RUNNING
2024-07-11 04:11:00,632 Sleeping for 5s. Reason: RUNNING
2024-07-11 04:11:06,036 Sleeping for 7s. Reason: RUNNING
2024-07-11 04:11:13,427 Sleeping for 6s. Reason: RUNNING
2024-07-11 04:11:19,825 Sleeping for 6s. Reason: RUNNING
2024-07-11 04:11:26,234 Sleeping for 10s. Reason: RUNNING
2024-07-11 04:11:38,535 Sleeping for 6s. Reason: PENDING
2024-07-11 04:11:44,939 Sleeping for 10s. Reason: RUNNING
2024-07-11 04:11:55,338 Sleeping for 8s. Reason: RUNNING
2024-07-11 04:12:03,741 Sleeping for 10s. Reason: RUNNING
2024-07-11 04:12:14,152 Sleeping for 9s. Reason: RUNNING
2024-07-11 04:12:23,556 Sleeping for 6s. Reason: RUNNING
2024-07-11 04:12:29,965 Sleeping for 7s. Reason: RUNNING
2024-07-11 04:12:37,363 Sleeping for 9s. Reason: RUNNING
2024-07-11 04:12:46,781 Sleeping for 6s. Reason: RUNNING
2024-07-11 04:12:53,204 Sleeping for 5s. Reason: RUNNING
2024-07-11 04:12:58,594 Sleeping for 5s. Reason: RUNNING
2024-07-11 04:13:09,741 Setting max_seq=508, max_extra_seq=2048
2024-07-11 04:17:17,920 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=54.2 pTM=0.408 ipTM=0.217
2024-07-11 04:18:40,058 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=53.8 pTM=0.408 ipTM=0.2 tol=14
2024-07-11 04:20:02,297 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=53.9 pTM=0.396 ipTM=0.239 tol=11.8
2024-07-11 04:21:24,540 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=54.1 pTM=0.376 ipTM=0.275 tol=9.48
2024-07-11 04:22:46,807 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=54.2 pTM=0.366 ipTM=0.278 tol=6.67
2024-07-11 04:24:09,093 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=54.2 pTM=0.354 ipTM=0.202 tol=5.8
2024-07-11 04:25:31,467 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=54.5 pTM=0.35 ipTM=0.194 tol=7.84
2024-07-11 04:26:53,769 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=54.5 pTM=0.342 ipTM=0.191 tol=6.48
2024-07-11 04:28:16,115 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=54.7 pTM=0.34 ipTM=0.259 tol=3.84
2024-07-11 04:29:38,452 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=55 pTM=0.339 ipTM=0.276 tol=4.87
2024-07-11 04:31:00,751 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=55.7 pTM=0.337 ipTM=0.218 tol=7.26
2024-07-11 04:32:23,131 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=56.2 pTM=0.334 ipTM=0.251 tol=4.57
2024-07-11 04:33:45,455 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=56.5 pTM=0.333 ipTM=0.259 tol=5.26
2024-07-11 04:35:07,774 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=56.8 pTM=0.335 ipTM=0.269 tol=4.05
2024-07-11 04:36:30,110 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=56.8 pTM=0.334 ipTM=0.277 tol=3.22
2024-07-11 04:37:52,506 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=56.8 pTM=0.331 ipTM=0.281 tol=1.99
2024-07-11 04:39:14,860 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=56.8 pTM=0.331 ipTM=0.286 tol=3.18
2024-07-11 04:40:37,235 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=56.8 pTM=0.333 ipTM=0.298 tol=2.83
2024-07-11 04:41:59,616 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=56.8 pTM=0.331 ipTM=0.301 tol=2.88
2024-07-11 04:43:22,015 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=56.9 pTM=0.33 ipTM=0.3 tol=2.17
2024-07-11 04:44:44,362 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=56.9 pTM=0.328 ipTM=0.303 tol=2.06
2024-07-11 04:46:06,705 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=57 pTM=0.331 ipTM=0.311 tol=2
2024-07-11 04:47:29,127 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=56.9 pTM=0.327 ipTM=0.311 tol=2.12
2024-07-11 04:48:51,486 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=57.1 pTM=0.329 ipTM=0.313 tol=1.96
2024-07-11 04:50:13,866 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=57.1 pTM=0.33 ipTM=0.313 tol=4.44
2024-07-11 04:51:36,247 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=57 pTM=0.331 ipTM=0.311 tol=4.11
2024-07-11 04:52:58,676 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=56.8 pTM=0.328 ipTM=0.308 tol=2.57
2024-07-11 04:54:21,001 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=57 pTM=0.334 ipTM=0.316 tol=2.06
2024-07-11 04:55:43,399 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=56.9 pTM=0.329 ipTM=0.311 tol=2.23
2024-07-11 04:57:05,755 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=57.1 pTM=0.328 ipTM=0.313 tol=1.75
2024-07-11 04:58:28,128 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=56.8 pTM=0.325 ipTM=0.315 tol=2.26
2024-07-11 04:58:28,130 alphafold2_multimer_v3_model_1_seed_000 took 2713.5s (30 recycles)
2024-07-11 04:59:52,170 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=54.4 pTM=0.442 ipTM=0.424
2024-07-11 05:01:14,657 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=55 pTM=0.42 ipTM=0.239 tol=17.3
2024-07-11 05:02:37,200 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=55.4 pTM=0.42 ipTM=0.238 tol=12.2
2024-07-11 05:03:59,740 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=55.8 pTM=0.416 ipTM=0.226 tol=7.96
2024-07-11 05:05:22,285 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=55.9 pTM=0.415 ipTM=0.23 tol=5.17
2024-07-11 05:06:44,892 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=55.9 pTM=0.415 ipTM=0.209 tol=6.23
2024-07-11 05:08:07,517 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=56.2 pTM=0.416 ipTM=0.212 tol=5.26
2024-07-11 05:09:30,015 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=56.3 pTM=0.416 ipTM=0.232 tol=3.79
2024-07-11 05:10:52,529 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=56.1 pTM=0.416 ipTM=0.213 tol=3.83
2024-07-11 05:12:15,095 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=56.3 pTM=0.415 ipTM=0.212 tol=3.11
2024-07-11 05:13:37,580 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=56.4 pTM=0.416 ipTM=0.213 tol=2.7
2024-07-11 05:15:00,083 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=56.3 pTM=0.414 ipTM=0.214 tol=3.11
2024-07-11 05:16:22,601 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=56.4 pTM=0.412 ipTM=0.218 tol=2.55
2024-07-11 05:17:45,128 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=56.4 pTM=0.414 ipTM=0.221 tol=2.74
2024-07-11 05:19:07,709 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=56.4 pTM=0.415 ipTM=0.224 tol=3.22
2024-07-11 05:20:30,208 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=56.5 pTM=0.414 ipTM=0.22 tol=5.19
2024-07-11 05:21:52,689 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=56.6 pTM=0.414 ipTM=0.251 tol=4.39
2024-07-11 05:23:15,213 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=56.5 pTM=0.418 ipTM=0.206 tol=3.11
2024-07-11 05:24:37,759 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=56.6 pTM=0.416 ipTM=0.201 tol=3.36
2024-07-11 05:26:00,240 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=56.6 pTM=0.417 ipTM=0.245 tol=2.62
2024-07-11 05:27:22,750 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=56.4 pTM=0.416 ipTM=0.213 tol=2.46
2024-07-11 05:28:45,253 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=56.8 pTM=0.416 ipTM=0.22 tol=2.38
2024-07-11 05:30:07,819 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=56.6 pTM=0.417 ipTM=0.234 tol=1.93
2024-07-11 05:31:30,363 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=56.5 pTM=0.417 ipTM=0.214 tol=2.61
2024-07-11 05:32:52,930 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=56.8 pTM=0.417 ipTM=0.249 tol=3.01
2024-07-11 05:34:15,445 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=56.6 pTM=0.417 ipTM=0.247 tol=2.75
2024-07-11 05:35:37,944 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=56.4 pTM=0.417 ipTM=0.227 tol=2.12
2024-07-11 05:37:00,460 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=56.6 pTM=0.417 ipTM=0.236 tol=3.49
2024-07-11 05:38:22,994 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=56.7 pTM=0.42 ipTM=0.277 tol=4.22
2024-07-11 05:39:45,489 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=56.8 pTM=0.419 ipTM=0.229 tol=2.74
2024-07-11 05:41:08,039 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=56.7 pTM=0.417 ipTM=0.221 tol=2.63
2024-07-11 05:41:08,040 alphafold2_multimer_v3_model_2_seed_000 took 2558.4s (30 recycles)
2024-07-11 05:42:32,340 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=53.5 pTM=0.412 ipTM=0.197
2024-07-11 05:43:55,005 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=52.7 pTM=0.397 ipTM=0.212 tol=21.1
2024-07-11 05:45:17,567 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=53.3 pTM=0.396 ipTM=0.183 tol=11.5
2024-07-11 05:46:40,164 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=53.3 pTM=0.399 ipTM=0.19 tol=8.87
2024-07-11 05:48:02,776 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=53.1 pTM=0.398 ipTM=0.182 tol=10.5
2024-07-11 05:49:25,442 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=53.3 pTM=0.398 ipTM=0.18 tol=5.96
2024-07-11 05:50:48,025 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=53.7 pTM=0.402 ipTM=0.177 tol=4.26
2024-07-11 05:52:10,607 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=53.6 pTM=0.402 ipTM=0.176 tol=4.86
2024-07-11 05:53:33,198 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=53.7 pTM=0.403 ipTM=0.175 tol=5.09
2024-07-11 05:54:55,779 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=54.1 pTM=0.405 ipTM=0.175 tol=3.35
2024-07-11 05:56:18,316 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=54.1 pTM=0.404 ipTM=0.18 tol=4.11
2024-07-11 05:57:40,871 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=54.2 pTM=0.405 ipTM=0.176 tol=4.26
2024-07-11 05:59:03,374 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=54.1 pTM=0.402 ipTM=0.175 tol=3.43
2024-07-11 06:00:25,943 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=54.3 pTM=0.401 ipTM=0.174 tol=4.67
2024-07-11 06:01:48,498 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=54 pTM=0.4 ipTM=0.175 tol=4.29
2024-07-11 06:03:11,118 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=54 pTM=0.403 ipTM=0.173 tol=5.07
2024-07-11 06:04:33,708 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=53.9 pTM=0.401 ipTM=0.174 tol=8.88
2024-07-11 06:05:56,322 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=53.8 pTM=0.404 ipTM=0.173 tol=7.39
2024-07-11 06:07:18,901 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=53.9 pTM=0.403 ipTM=0.174 tol=12
2024-07-11 06:08:41,502 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=54.2 pTM=0.405 ipTM=0.173 tol=6.41
2024-07-11 06:10:04,076 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=54.3 pTM=0.405 ipTM=0.175 tol=8.88
2024-07-11 06:11:26,707 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=54.4 pTM=0.406 ipTM=0.173 tol=10.3
2024-07-11 06:12:49,323 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=54.3 pTM=0.406 ipTM=0.173 tol=5.71
2024-07-11 06:14:11,968 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=54.4 pTM=0.407 ipTM=0.172 tol=4.03
2024-07-11 06:15:34,583 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=54.5 pTM=0.407 ipTM=0.176 tol=4.93
2024-07-11 06:16:57,205 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=54.4 pTM=0.408 ipTM=0.174 tol=5.65
2024-07-11 06:18:19,837 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=54.3 pTM=0.408 ipTM=0.175 tol=6.11
2024-07-11 06:19:42,430 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=54.3 pTM=0.409 ipTM=0.174 tol=4.55
2024-07-11 06:21:05,023 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=54.1 pTM=0.408 ipTM=0.175 tol=3.74
2024-07-11 06:22:27,708 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=54.3 pTM=0.409 ipTM=0.174 tol=5.41
2024-07-11 06:23:50,329 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=54.2 pTM=0.408 ipTM=0.176 tol=4.03
2024-07-11 06:23:50,331 alphafold2_multimer_v3_model_3_seed_000 took 2560.7s (30 recycles)
2024-07-11 06:25:14,609 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=50.4 pTM=0.389 ipTM=0.171
2024-07-11 06:26:37,365 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=51.4 pTM=0.375 ipTM=0.172 tol=19
2024-07-11 06:28:00,134 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=51.6 pTM=0.384 ipTM=0.23 tol=18.8
2024-07-11 06:29:22,810 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=50.9 pTM=0.382 ipTM=0.178 tol=10.1
2024-07-11 06:30:45,528 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=51.6 pTM=0.378 ipTM=0.169 tol=8.84
2024-07-11 06:32:08,255 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=51.4 pTM=0.379 ipTM=0.17 tol=8.42
2024-07-11 06:33:31,023 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=52 pTM=0.381 ipTM=0.169 tol=7.73
2024-07-11 06:34:53,754 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=51.2 pTM=0.384 ipTM=0.17 tol=7.63
2024-07-11 06:36:16,531 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=51.8 pTM=0.383 ipTM=0.17 tol=9.04
2024-07-11 06:37:39,264 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=51.8 pTM=0.386 ipTM=0.172 tol=10.9
2024-07-11 06:39:02,103 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=52.1 pTM=0.383 ipTM=0.171 tol=7.99
2024-07-11 06:40:24,879 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=51.7 pTM=0.385 ipTM=0.168 tol=8.24
2024-07-11 06:41:47,691 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=51.2 pTM=0.385 ipTM=0.177 tol=9.5
2024-07-11 06:43:10,493 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=51.2 pTM=0.387 ipTM=0.169 tol=10.2
2024-07-11 06:44:33,263 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=51.5 pTM=0.389 ipTM=0.176 tol=13.7
2024-07-11 06:45:56,020 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=51.4 pTM=0.393 ipTM=0.17 tol=11.3
2024-07-11 06:47:18,805 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=51.4 pTM=0.387 ipTM=0.175 tol=8.3
2024-07-11 06:48:41,657 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=51.6 pTM=0.393 ipTM=0.169 tol=10.8
2024-07-11 06:50:04,442 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=51.8 pTM=0.39 ipTM=0.18 tol=9.99
2024-07-11 06:51:27,257 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=51.9 pTM=0.392 ipTM=0.168 tol=7.76
2024-07-11 06:52:50,104 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=52.1 pTM=0.391 ipTM=0.177 tol=6.33
2024-07-11 06:54:12,963 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=52.2 pTM=0.392 ipTM=0.168 tol=5.38
2024-07-11 06:55:35,736 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=52.2 pTM=0.391 ipTM=0.173 tol=6.89
2024-07-11 06:56:58,515 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=52.3 pTM=0.395 ipTM=0.169 tol=8.53
2024-07-11 06:58:21,308 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=52.2 pTM=0.391 ipTM=0.174 tol=8.24
2024-07-11 06:59:44,091 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=52 pTM=0.395 ipTM=0.17 tol=9.08
2024-07-11 07:01:06,915 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=52 pTM=0.395 ipTM=0.172 tol=6.21
2024-07-11 07:02:29,694 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=52.3 pTM=0.394 ipTM=0.169 tol=5.3
2024-07-11 07:03:52,522 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=52.2 pTM=0.394 ipTM=0.175 tol=9.7
2024-07-11 07:05:15,344 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=52.4 pTM=0.391 ipTM=0.169 tol=9.48
2024-07-11 07:06:38,153 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=52.2 pTM=0.39 ipTM=0.171 tol=6.36
2024-07-11 07:06:38,155 alphafold2_multimer_v3_model_4_seed_000 took 2566.3s (30 recycles)
2024-07-11 07:08:02,435 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=54 pTM=0.407 ipTM=0.227
2024-07-11 07:09:25,071 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=53.4 pTM=0.404 ipTM=0.191 tol=15.4
2024-07-11 07:10:47,704 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=53.6 pTM=0.401 ipTM=0.185 tol=9.64
2024-07-11 07:12:10,424 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=53.9 pTM=0.403 ipTM=0.188 tol=8.52
2024-07-11 07:13:33,126 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=54 pTM=0.401 ipTM=0.184 tol=8.48
2024-07-11 07:14:55,819 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=54.2 pTM=0.404 ipTM=0.207 tol=6.62
2024-07-11 07:16:18,491 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=54.2 pTM=0.406 ipTM=0.19 tol=5.3
2024-07-11 07:17:41,156 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=53.9 pTM=0.406 ipTM=0.184 tol=6.38
2024-07-11 07:19:03,839 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=53.8 pTM=0.405 ipTM=0.198 tol=3.84
2024-07-11 07:20:26,509 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=54 pTM=0.406 ipTM=0.184 tol=2.18
2024-07-11 07:21:49,194 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=53.9 pTM=0.405 ipTM=0.175 tol=6
2024-07-11 07:23:11,861 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=53.8 pTM=0.404 ipTM=0.182 tol=5.42
2024-07-11 07:24:34,497 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=53.7 pTM=0.401 ipTM=0.182 tol=2.57
2024-07-11 07:25:57,124 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=53.4 pTM=0.401 ipTM=0.188 tol=5.69
2024-07-11 07:27:19,757 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=53.6 pTM=0.401 ipTM=0.187 tol=4.12
2024-07-11 07:28:42,462 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=53.6 pTM=0.402 ipTM=0.191 tol=5.67
2024-07-11 07:30:05,098 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=53.6 pTM=0.398 ipTM=0.191 tol=3.18
2024-07-11 07:31:27,790 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=53.4 pTM=0.401 ipTM=0.193 tol=3.76
2024-07-11 07:32:50,397 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=53.6 pTM=0.402 ipTM=0.191 tol=5.24
2024-07-11 07:34:13,071 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=53.7 pTM=0.402 ipTM=0.182 tol=5.94
2024-07-11 07:35:35,734 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=53.8 pTM=0.4 ipTM=0.191 tol=2.17
2024-07-11 07:36:58,384 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=53.7 pTM=0.403 ipTM=0.194 tol=5.3
2024-07-11 07:38:21,054 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=53.7 pTM=0.402 ipTM=0.19 tol=5.68
2024-07-11 07:39:43,715 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=53.6 pTM=0.403 ipTM=0.181 tol=3.4
2024-07-11 07:41:06,323 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=53.9 pTM=0.4 ipTM=0.196 tol=3.06
2024-07-11 07:42:28,947 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=53.7 pTM=0.401 ipTM=0.192 tol=5.33
2024-07-11 07:43:51,587 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=53.6 pTM=0.402 ipTM=0.2 tol=3.29
2024-07-11 07:45:14,267 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=53.7 pTM=0.403 ipTM=0.189 tol=4.77
2024-07-11 07:46:36,910 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=53.6 pTM=0.401 ipTM=0.2 tol=4.03
2024-07-11 07:47:59,632 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=53.7 pTM=0.401 ipTM=0.187 tol=2.95
2024-07-11 07:49:22,301 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=53.7 pTM=0.403 ipTM=0.203 tol=4.14
2024-07-11 07:49:22,303 alphafold2_multimer_v3_model_5_seed_000 took 2562.6s (30 recycles)
2024-07-11 07:49:23,848 reranking models by 'multimer' metric
2024-07-11 07:49:27,494 Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
2024-07-11 07:52:22,872 Relaxation took 179.0s
2024-07-11 07:52:22,872 rank_001_alphafold2_multimer_v3_model_1_seed_000 pLDDT=56.8 pTM=0.325 ipTM=0.315
2024-07-11 07:54:51,493 Relaxation took 148.6s
2024-07-11 07:54:51,493 rank_002_alphafold2_multimer_v3_model_2_seed_000 pLDDT=56.7 pTM=0.417 ipTM=0.221
2024-07-11 07:57:25,135 Relaxation took 153.6s
2024-07-11 07:57:25,135 rank_003_alphafold2_multimer_v3_model_5_seed_000 pLDDT=53.7 pTM=0.403 ipTM=0.203
2024-07-11 08:00:57,842 Relaxation took 212.7s
2024-07-11 08:00:57,842 rank_004_alphafold2_multimer_v3_model_3_seed_000 pLDDT=54.2 pTM=0.408 ipTM=0.176
2024-07-11 08:04:11,979 Relaxation took 194.1s
2024-07-11 08:04:11,979 rank_005_alphafold2_multimer_v3_model_4_seed_000 pLDDT=52.2 pTM=0.39 ipTM=0.171
2024-07-11 08:04:15,628 Done