2024-07-11 04:18:52,533 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3) 2024-07-11 04:18:52,853 Running on GPU 2024-07-11 04:18:56,613 Found 6 citations for tools or databases 2024-07-11 04:18:56,613 Query 1/1: LPIN3_O10J5 (length 1160) 2024-07-11 04:18:57,112 Sleeping for 6s. Reason: PENDING 2024-07-11 04:19:03,526 Sleeping for 6s. Reason: RUNNING 2024-07-11 04:19:09,933 Sleeping for 8s. Reason: RUNNING 2024-07-11 04:19:18,349 Sleeping for 6s. Reason: RUNNING 2024-07-11 04:19:24,765 Sleeping for 8s. Reason: RUNNING 2024-07-11 04:19:33,176 Sleeping for 7s. Reason: RUNNING 2024-07-11 04:19:40,577 Sleeping for 9s. Reason: RUNNING 2024-07-11 04:19:49,998 Sleeping for 9s. Reason: RUNNING 2024-07-11 04:19:59,409 Sleeping for 5s. Reason: RUNNING 2024-07-11 04:20:04,816 Sleeping for 8s. Reason: RUNNING 2024-07-11 04:20:13,223 Sleeping for 5s. Reason: RUNNING 2024-07-11 04:20:18,628 Sleeping for 9s. Reason: RUNNING 2024-07-11 04:20:28,043 Sleeping for 8s. Reason: RUNNING 2024-07-11 04:20:36,450 Sleeping for 10s. Reason: RUNNING 2024-07-11 04:20:46,851 Sleeping for 5s. Reason: RUNNING 2024-07-11 04:20:52,262 Sleeping for 5s. Reason: RUNNING 2024-07-11 04:20:59,520 Sleeping for 9s. Reason: PENDING 2024-07-11 04:21:08,931 Sleeping for 8s. Reason: RUNNING 2024-07-11 04:21:17,333 Sleeping for 7s. Reason: RUNNING 2024-07-11 04:21:24,736 Sleeping for 5s. Reason: RUNNING 2024-07-11 04:21:30,134 Sleeping for 9s. Reason: RUNNING 2024-07-11 04:21:39,543 Sleeping for 7s. Reason: RUNNING 2024-07-11 04:21:46,958 Sleeping for 5s. Reason: RUNNING 2024-07-11 04:21:52,364 Sleeping for 6s. Reason: RUNNING 2024-07-11 04:21:58,761 Sleeping for 10s. Reason: RUNNING 2024-07-11 04:22:09,173 Sleeping for 9s. Reason: RUNNING 2024-07-11 04:22:18,576 Sleeping for 7s. Reason: RUNNING 2024-07-11 04:22:25,990 Sleeping for 7s. Reason: RUNNING 2024-07-11 04:22:33,402 Sleeping for 10s. Reason: RUNNING 2024-07-11 04:22:43,807 Sleeping for 10s. Reason: RUNNING 2024-07-11 04:22:57,494 Setting max_seq=508, max_extra_seq=2048 2024-07-11 04:25:22,307 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=50 pTM=0.361 ipTM=0.169 2024-07-11 04:25:51,889 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=54.7 pTM=0.389 ipTM=0.26 tol=14.1 2024-07-11 04:26:21,593 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=56 pTM=0.394 ipTM=0.318 tol=11.8 2024-07-11 04:26:51,368 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=55.5 pTM=0.377 ipTM=0.222 tol=6.62 2024-07-11 04:27:21,192 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=55.3 pTM=0.371 ipTM=0.193 tol=8.32 2024-07-11 04:27:51,038 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=55.3 pTM=0.37 ipTM=0.189 tol=5 2024-07-11 04:28:20,900 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=55.1 pTM=0.373 ipTM=0.198 tol=4.36 2024-07-11 04:28:50,790 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=55.1 pTM=0.372 ipTM=0.196 tol=7.41 2024-07-11 04:29:20,664 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=55 pTM=0.377 ipTM=0.216 tol=6.05 2024-07-11 04:29:50,557 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=55.2 pTM=0.378 ipTM=0.219 tol=3.08 2024-07-11 04:30:20,454 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=54.7 pTM=0.379 ipTM=0.226 tol=5.74 2024-07-11 04:30:50,324 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=54.9 pTM=0.377 ipTM=0.219 tol=1.77 2024-07-11 04:31:20,201 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=55.1 pTM=0.38 ipTM=0.222 tol=2.78 2024-07-11 04:31:50,064 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=55 pTM=0.383 ipTM=0.235 tol=4.56 2024-07-11 04:32:19,949 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=54.9 pTM=0.38 ipTM=0.223 tol=1.75 2024-07-11 04:32:49,831 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=54.9 pTM=0.381 ipTM=0.229 tol=4.96 2024-07-11 04:33:19,717 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=54.8 pTM=0.382 ipTM=0.229 tol=4.73 2024-07-11 04:33:49,606 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=53.9 pTM=0.379 ipTM=0.227 tol=11.2 2024-07-11 04:34:19,524 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=55 pTM=0.379 ipTM=0.222 tol=10.7 2024-07-11 04:34:49,425 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=55.1 pTM=0.379 ipTM=0.219 tol=7.04 2024-07-11 04:35:19,314 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=54.7 pTM=0.382 ipTM=0.228 tol=5.88 2024-07-11 04:35:49,221 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=55.1 pTM=0.382 ipTM=0.224 tol=6.3 2024-07-11 04:36:19,128 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=54.8 pTM=0.38 ipTM=0.22 tol=5.98 2024-07-11 04:36:49,048 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=55.1 pTM=0.384 ipTM=0.227 tol=1.94 2024-07-11 04:37:18,954 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=54.8 pTM=0.379 ipTM=0.221 tol=1.85 2024-07-11 04:37:48,861 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=55.2 pTM=0.382 ipTM=0.229 tol=1.99 2024-07-11 04:38:18,763 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=55.3 pTM=0.383 ipTM=0.226 tol=2.04 2024-07-11 04:38:48,673 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=55.1 pTM=0.382 ipTM=0.225 tol=2.21 2024-07-11 04:39:18,589 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=55 pTM=0.379 ipTM=0.213 tol=1.72 2024-07-11 04:39:48,488 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=55 pTM=0.382 ipTM=0.225 tol=1.5 2024-07-11 04:40:18,404 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=55.1 pTM=0.378 ipTM=0.214 tol=6.01 2024-07-11 04:40:18,405 alphafold2_multimer_v3_model_1_seed_000 took 1036.0s (30 recycles) 2024-07-11 04:40:49,116 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=50.2 pTM=0.366 ipTM=0.198 2024-07-11 04:41:19,121 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=55.5 pTM=0.389 ipTM=0.217 tol=14.5 2024-07-11 04:41:49,112 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=56.6 pTM=0.408 ipTM=0.257 tol=12.2 2024-07-11 04:42:19,102 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=57.1 pTM=0.41 ipTM=0.252 tol=7.47 2024-07-11 04:42:49,079 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=57.3 pTM=0.411 ipTM=0.254 tol=3.89 2024-07-11 04:43:19,061 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=57.1 pTM=0.407 ipTM=0.25 tol=3.86 2024-07-11 04:43:49,042 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=57.1 pTM=0.407 ipTM=0.248 tol=2.52 2024-07-11 04:44:19,011 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=57.2 pTM=0.409 ipTM=0.257 tol=2.8 2024-07-11 04:44:48,985 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=57.1 pTM=0.408 ipTM=0.249 tol=4.11 2024-07-11 04:45:18,964 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=57.3 pTM=0.41 ipTM=0.255 tol=3.38 2024-07-11 04:45:48,930 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=57 pTM=0.409 ipTM=0.248 tol=4.61 2024-07-11 04:46:18,914 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=57.1 pTM=0.409 ipTM=0.25 tol=3.83 2024-07-11 04:46:48,900 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=57.2 pTM=0.409 ipTM=0.238 tol=4.02 2024-07-11 04:47:18,882 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=57.3 pTM=0.409 ipTM=0.3 tol=3.43 2024-07-11 04:47:48,849 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=57 pTM=0.406 ipTM=0.333 tol=2.1 2024-07-11 04:48:18,847 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=56.9 pTM=0.407 ipTM=0.33 tol=3.07 2024-07-11 04:48:48,839 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=57 pTM=0.407 ipTM=0.348 tol=3.16 2024-07-11 04:49:18,788 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=56.6 pTM=0.407 ipTM=0.35 tol=10 2024-07-11 04:49:48,734 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=57.2 pTM=0.405 ipTM=0.347 tol=6.63 2024-07-11 04:50:18,670 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=57 pTM=0.407 ipTM=0.373 tol=5.05 2024-07-11 04:50:48,614 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=56.9 pTM=0.406 ipTM=0.349 tol=2.82 2024-07-11 04:51:18,552 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=56.8 pTM=0.406 ipTM=0.359 tol=4.77 2024-07-11 04:51:48,529 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=56.9 pTM=0.408 ipTM=0.347 tol=3.95 2024-07-11 04:52:18,491 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=57.1 pTM=0.408 ipTM=0.354 tol=6.02 2024-07-11 04:52:48,452 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=57.2 pTM=0.409 ipTM=0.351 tol=5.34 2024-07-11 04:53:18,422 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=57.2 pTM=0.408 ipTM=0.349 tol=2.93 2024-07-11 04:53:48,367 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=57.5 pTM=0.409 ipTM=0.357 tol=1.58 2024-07-11 04:54:18,295 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=57.2 pTM=0.407 ipTM=0.347 tol=2.08 2024-07-11 04:54:48,246 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=57.3 pTM=0.408 ipTM=0.325 tol=4.87 2024-07-11 04:55:18,190 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=57.2 pTM=0.407 ipTM=0.336 tol=4.72 2024-07-11 04:55:48,130 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=57.4 pTM=0.408 ipTM=0.341 tol=4.16 2024-07-11 04:55:48,131 alphafold2_multimer_v3_model_2_seed_000 took 928.9s (30 recycles) 2024-07-11 04:56:18,954 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=48.3 pTM=0.36 ipTM=0.178 2024-07-11 04:56:49,006 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=52.1 pTM=0.366 ipTM=0.209 tol=10.9 2024-07-11 04:57:19,067 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=55.4 pTM=0.384 ipTM=0.215 tol=7.43 2024-07-11 04:57:49,130 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=56.1 pTM=0.397 ipTM=0.21 tol=7.61 2024-07-11 04:58:19,205 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=55.8 pTM=0.397 ipTM=0.217 tol=6.74 2024-07-11 04:58:49,297 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=55.6 pTM=0.395 ipTM=0.215 tol=6.15 2024-07-11 04:59:19,429 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=55.4 pTM=0.391 ipTM=0.214 tol=16.1 2024-07-11 04:59:49,518 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=56.3 pTM=0.397 ipTM=0.225 tol=7.71 2024-07-11 05:00:19,589 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=55.9 pTM=0.392 ipTM=0.221 tol=4.4 2024-07-11 05:00:49,676 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=56.1 pTM=0.397 ipTM=0.227 tol=2.22 2024-07-11 05:01:19,778 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=56.2 pTM=0.393 ipTM=0.225 tol=3.06 2024-07-11 05:01:49,862 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=56.2 pTM=0.396 ipTM=0.224 tol=3.63 2024-07-11 05:02:19,927 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=56.2 pTM=0.392 ipTM=0.234 tol=2.91 2024-07-11 05:02:49,988 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=56.2 pTM=0.396 ipTM=0.235 tol=2.04 2024-07-11 05:03:20,059 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=56.2 pTM=0.391 ipTM=0.232 tol=2.56 2024-07-11 05:03:50,121 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=56.7 pTM=0.399 ipTM=0.232 tol=2.71 2024-07-11 05:04:20,200 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=56.2 pTM=0.392 ipTM=0.242 tol=2.47 2024-07-11 05:04:50,264 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=56.6 pTM=0.398 ipTM=0.238 tol=2.48 2024-07-11 05:05:20,357 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=56.2 pTM=0.393 ipTM=0.241 tol=2.63 2024-07-11 05:05:50,433 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=56.5 pTM=0.397 ipTM=0.237 tol=2.57 2024-07-11 05:06:20,533 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=56.1 pTM=0.392 ipTM=0.238 tol=3.87 2024-07-11 05:06:50,607 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=56.3 pTM=0.396 ipTM=0.237 tol=3.99 2024-07-11 05:07:20,693 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=56 pTM=0.392 ipTM=0.239 tol=2.66 2024-07-11 05:07:50,730 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=56.2 pTM=0.397 ipTM=0.23 tol=2.97 2024-07-11 05:08:20,799 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=56.1 pTM=0.393 ipTM=0.227 tol=2.5 2024-07-11 05:08:50,874 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=56.1 pTM=0.395 ipTM=0.236 tol=2.04 2024-07-11 05:09:20,954 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=56.2 pTM=0.391 ipTM=0.241 tol=2.16 2024-07-11 05:09:51,017 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=56.2 pTM=0.395 ipTM=0.254 tol=2.71 2024-07-11 05:10:21,075 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=56.2 pTM=0.393 ipTM=0.285 tol=2.85 2024-07-11 05:10:51,138 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=56.1 pTM=0.395 ipTM=0.309 tol=2.77 2024-07-11 05:11:21,215 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=56.2 pTM=0.391 ipTM=0.33 tol=2.28 2024-07-11 05:11:21,216 alphafold2_multimer_v3_model_3_seed_000 took 932.3s (30 recycles) 2024-07-11 05:11:52,001 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=48.6 pTM=0.365 ipTM=0.216 2024-07-11 05:12:22,018 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=50.1 pTM=0.374 ipTM=0.212 tol=18.2 2024-07-11 05:12:52,041 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=53.6 pTM=0.392 ipTM=0.281 tol=14.8 2024-07-11 05:13:22,051 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=54.4 pTM=0.388 ipTM=0.258 tol=11.8 2024-07-11 05:13:52,076 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=53.7 pTM=0.38 ipTM=0.239 tol=7.12 2024-07-11 05:14:22,132 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=53.9 pTM=0.377 ipTM=0.232 tol=9.35 2024-07-11 05:14:52,183 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=53.9 pTM=0.38 ipTM=0.241 tol=7.29 2024-07-11 05:15:22,218 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=54 pTM=0.379 ipTM=0.238 tol=8.3 2024-07-11 05:15:52,269 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=54.1 pTM=0.382 ipTM=0.246 tol=7.34 2024-07-11 05:16:22,318 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=53.9 pTM=0.379 ipTM=0.245 tol=8.49 2024-07-11 05:16:52,357 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=53.9 pTM=0.383 ipTM=0.246 tol=13.7 2024-07-11 05:17:22,410 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=54.2 pTM=0.38 ipTM=0.245 tol=7.78 2024-07-11 05:17:52,491 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=54.1 pTM=0.38 ipTM=0.239 tol=3.1 2024-07-11 05:18:22,534 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=53.9 pTM=0.378 ipTM=0.237 tol=5.39 2024-07-11 05:18:52,617 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=54.1 pTM=0.379 ipTM=0.235 tol=4.5 2024-07-11 05:19:22,713 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=54 pTM=0.376 ipTM=0.231 tol=3.25 2024-07-11 05:19:52,817 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=54.1 pTM=0.382 ipTM=0.242 tol=3.21 2024-07-11 05:20:22,897 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=54 pTM=0.378 ipTM=0.235 tol=9.12 2024-07-11 05:20:52,993 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=54 pTM=0.381 ipTM=0.24 tol=7.5 2024-07-11 05:21:23,054 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=53.4 pTM=0.378 ipTM=0.234 tol=11.6 2024-07-11 05:21:53,118 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=53.8 pTM=0.383 ipTM=0.245 tol=6.73 2024-07-11 05:22:23,190 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=53.2 pTM=0.377 ipTM=0.24 tol=9.95 2024-07-11 05:22:53,262 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=53.9 pTM=0.384 ipTM=0.252 tol=5.3 2024-07-11 05:23:23,323 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=53.7 pTM=0.377 ipTM=0.232 tol=5.39 2024-07-11 05:23:53,391 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=53.8 pTM=0.387 ipTM=0.264 tol=6.46 2024-07-11 05:24:23,457 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=53.4 pTM=0.375 ipTM=0.233 tol=4.4 2024-07-11 05:24:53,534 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=54.2 pTM=0.386 ipTM=0.261 tol=4.15 2024-07-11 05:25:23,633 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=53.4 pTM=0.376 ipTM=0.236 tol=7.75 2024-07-11 05:25:53,740 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=54.2 pTM=0.382 ipTM=0.246 tol=5.34 2024-07-11 05:26:23,843 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=53.6 pTM=0.378 ipTM=0.236 tol=5.94 2024-07-11 05:26:53,955 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=54.2 pTM=0.38 ipTM=0.237 tol=7.34 2024-07-11 05:26:53,956 alphafold2_multimer_v3_model_4_seed_000 took 931.9s (30 recycles) 2024-07-11 05:27:24,762 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=47.9 pTM=0.375 ipTM=0.236 2024-07-11 05:27:54,855 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=54.2 pTM=0.381 ipTM=0.236 tol=13.3 2024-07-11 05:28:24,926 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=57 pTM=0.404 ipTM=0.231 tol=14.8 2024-07-11 05:28:54,991 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=56.7 pTM=0.41 ipTM=0.236 tol=7.25 2024-07-11 05:29:25,074 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=56.3 pTM=0.407 ipTM=0.23 tol=6.29 2024-07-11 05:29:55,150 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=56.2 pTM=0.409 ipTM=0.233 tol=6.02 2024-07-11 05:30:25,171 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=57.1 pTM=0.431 ipTM=0.328 tol=14.2 2024-07-11 05:30:55,168 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=57.3 pTM=0.422 ipTM=0.304 tol=4.73 2024-07-11 05:31:25,193 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=56.9 pTM=0.425 ipTM=0.311 tol=4.21 2024-07-11 05:31:55,201 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=57 pTM=0.42 ipTM=0.287 tol=1.92 2024-07-11 05:32:25,231 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=56.9 pTM=0.426 ipTM=0.312 tol=4.38 2024-07-11 05:32:55,258 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=56.9 pTM=0.416 ipTM=0.272 tol=4.41 2024-07-11 05:33:25,309 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=56.8 pTM=0.427 ipTM=0.317 tol=2.38 2024-07-11 05:33:55,365 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=56.9 pTM=0.418 ipTM=0.276 tol=2.2 2024-07-11 05:34:25,403 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=56.9 pTM=0.429 ipTM=0.321 tol=4.3 2024-07-11 05:34:55,433 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=57.3 pTM=0.428 ipTM=0.369 tol=3.68 2024-07-11 05:35:25,481 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=57.1 pTM=0.427 ipTM=0.341 tol=4.42 2024-07-11 05:35:55,521 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=57.2 pTM=0.425 ipTM=0.301 tol=1.79 2024-07-11 05:36:25,571 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=56.8 pTM=0.422 ipTM=0.295 tol=4.71 2024-07-11 05:36:55,592 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=56.8 pTM=0.422 ipTM=0.295 tol=1.81 2024-07-11 05:37:25,617 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=56.7 pTM=0.417 ipTM=0.291 tol=2.36 2024-07-11 05:37:55,616 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=56.9 pTM=0.431 ipTM=0.326 tol=4.39 2024-07-11 05:38:25,639 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=56.6 pTM=0.417 ipTM=0.284 tol=2.12 2024-07-11 05:38:55,641 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=57.2 pTM=0.447 ipTM=0.385 tol=2.56 2024-07-11 05:39:25,645 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=57.2 pTM=0.429 ipTM=0.32 tol=2.65 2024-07-11 05:39:55,651 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=57.1 pTM=0.446 ipTM=0.384 tol=4.4 2024-07-11 05:40:25,655 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=57.3 pTM=0.429 ipTM=0.364 tol=2.8 2024-07-11 05:40:55,667 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=57.1 pTM=0.435 ipTM=0.343 tol=3.62 2024-07-11 05:41:25,693 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=56.8 pTM=0.419 ipTM=0.288 tol=3.27 2024-07-11 05:41:55,725 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=56.9 pTM=0.435 ipTM=0.343 tol=4.93 2024-07-11 05:42:25,757 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=56.9 pTM=0.422 ipTM=0.302 tol=3.09 2024-07-11 05:42:25,758 alphafold2_multimer_v3_model_5_seed_000 took 931.0s (30 recycles) 2024-07-11 05:42:26,566 reranking models by 'multimer' metric 2024-07-11 05:42:27,749 Warning: importing 'simtk.openmm' is deprecated. Import 'openmm' instead. 2024-07-11 05:44:12,096 Relaxation took 105.5s 2024-07-11 05:44:12,097 rank_001_alphafold2_multimer_v3_model_2_seed_000 pLDDT=57.4 pTM=0.408 ipTM=0.341 2024-07-11 05:45:33,735 Relaxation took 81.6s 2024-07-11 05:45:33,735 rank_002_alphafold2_multimer_v3_model_3_seed_000 pLDDT=56.2 pTM=0.391 ipTM=0.33 2024-07-11 05:47:50,976 Relaxation took 137.2s 2024-07-11 05:47:50,976 rank_003_alphafold2_multimer_v3_model_5_seed_000 pLDDT=56.9 pTM=0.422 ipTM=0.302 2024-07-11 05:49:28,897 Relaxation took 97.9s 2024-07-11 05:49:28,897 rank_004_alphafold2_multimer_v3_model_4_seed_000 pLDDT=54.2 pTM=0.38 ipTM=0.237 2024-07-11 05:52:00,460 Relaxation took 151.6s 2024-07-11 05:52:00,460 rank_005_alphafold2_multimer_v3_model_1_seed_000 pLDDT=55.1 pTM=0.378 ipTM=0.214 2024-07-11 05:52:02,606 Done