2024-07-11 04:32:31,819 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3)
2024-07-11 04:32:32,147 Running on GPU
2024-07-11 04:32:35,793 Found 6 citations for tools or databases
2024-07-11 04:32:35,794 Query 1/1: LRFN2_LMTK3 (length 2249)
2024-07-11 04:32:36,224 Sleeping for 5s. Reason: PENDING
2024-07-11 04:32:41,623 Sleeping for 8s. Reason: RUNNING
2024-07-11 04:32:50,103 Sleeping for 9s. Reason: RUNNING
2024-07-11 04:32:59,499 Sleeping for 10s. Reason: RUNNING
2024-07-11 04:33:09,922 Sleeping for 10s. Reason: RUNNING
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2024-07-11 04:33:27,778 Sleeping for 5s. Reason: RUNNING
2024-07-11 04:33:33,182 Sleeping for 10s. Reason: RUNNING
2024-07-11 04:33:43,600 Sleeping for 6s. Reason: RUNNING
2024-07-11 04:33:50,017 Sleeping for 6s. Reason: RUNNING
2024-07-11 04:33:56,421 Sleeping for 8s. Reason: RUNNING
2024-07-11 04:34:04,832 Sleeping for 6s. Reason: RUNNING
2024-07-11 04:34:11,228 Sleeping for 8s. Reason: RUNNING
2024-07-11 04:34:19,637 Sleeping for 5s. Reason: RUNNING
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2024-07-11 04:34:34,459 Sleeping for 10s. Reason: RUNNING
2024-07-11 04:34:44,868 Sleeping for 7s. Reason: RUNNING
2024-07-11 04:34:52,282 Sleeping for 10s. Reason: RUNNING
2024-07-11 04:35:02,699 Sleeping for 6s. Reason: RUNNING
2024-07-11 04:35:09,099 Sleeping for 10s. Reason: RUNNING
2024-07-11 04:35:19,497 Sleeping for 6s. Reason: RUNNING
2024-07-11 04:35:25,914 Sleeping for 7s. Reason: RUNNING
2024-07-11 04:35:33,316 Sleeping for 7s. Reason: RUNNING
2024-07-11 04:35:40,720 Sleeping for 10s. Reason: RUNNING
2024-07-11 04:35:51,134 Sleeping for 7s. Reason: RUNNING
2024-07-11 04:35:58,536 Sleeping for 5s. Reason: RUNNING
2024-07-11 04:36:03,950 Sleeping for 5s. Reason: RUNNING
2024-07-11 04:36:09,362 Sleeping for 8s. Reason: RUNNING
2024-07-11 04:36:17,778 Sleeping for 6s. Reason: RUNNING
2024-07-11 04:36:24,188 Sleeping for 9s. Reason: RUNNING
2024-07-11 04:36:33,596 Sleeping for 8s. Reason: RUNNING
2024-07-11 04:36:42,022 Sleeping for 5s. Reason: RUNNING
2024-07-11 04:36:47,425 Sleeping for 10s. Reason: RUNNING
2024-07-11 04:36:57,838 Sleeping for 7s. Reason: RUNNING
2024-07-11 04:37:05,255 Sleeping for 9s. Reason: RUNNING
2024-07-11 04:37:14,690 Sleeping for 8s. Reason: RUNNING
2024-07-11 04:37:23,109 Sleeping for 5s. Reason: RUNNING
2024-07-11 04:37:28,503 Sleeping for 7s. Reason: RUNNING
2024-07-11 04:37:35,912 Sleeping for 9s. Reason: RUNNING
2024-07-11 04:37:45,322 Sleeping for 10s. Reason: RUNNING
2024-07-11 04:37:55,728 Sleeping for 9s. Reason: RUNNING
2024-07-11 04:38:05,146 Sleeping for 9s. Reason: RUNNING
2024-07-11 04:38:14,568 Sleeping for 9s. Reason: RUNNING
2024-07-11 04:38:23,991 Sleeping for 6s. Reason: RUNNING
2024-07-11 04:38:30,410 Sleeping for 8s. Reason: RUNNING
2024-07-11 04:38:38,818 Sleeping for 5s. Reason: RUNNING
2024-07-11 04:38:44,230 Sleeping for 9s. Reason: RUNNING
2024-07-11 04:38:53,649 Sleeping for 9s. Reason: RUNNING
2024-07-11 04:39:03,050 Sleeping for 8s. Reason: RUNNING
2024-07-11 04:39:11,470 Sleeping for 9s. Reason: RUNNING
2024-07-11 04:39:20,881 Sleeping for 9s. Reason: RUNNING
2024-07-11 04:39:30,279 Sleeping for 9s. Reason: RUNNING
2024-07-11 04:39:39,685 Sleeping for 5s. Reason: RUNNING
2024-07-11 04:39:45,080 Sleeping for 9s. Reason: RUNNING
2024-07-11 04:39:54,483 Sleeping for 7s. Reason: RUNNING
2024-07-11 04:40:01,882 Sleeping for 6s. Reason: RUNNING
2024-07-11 04:40:08,293 Sleeping for 9s. Reason: RUNNING
2024-07-11 04:40:17,684 Sleeping for 7s. Reason: RUNNING
2024-07-11 04:40:27,019 Sleeping for 6s. Reason: PENDING
2024-07-11 04:40:33,432 Sleeping for 6s. Reason: RUNNING
2024-07-11 04:40:39,829 Sleeping for 7s. Reason: RUNNING
2024-07-11 04:40:47,220 Sleeping for 9s. Reason: RUNNING
2024-07-11 04:40:56,627 Sleeping for 5s. Reason: RUNNING
2024-07-11 04:41:02,025 Sleeping for 5s. Reason: RUNNING
2024-07-11 04:41:07,423 Sleeping for 9s. Reason: RUNNING
2024-07-11 04:41:16,827 Sleeping for 5s. Reason: RUNNING
2024-07-11 04:41:22,253 Sleeping for 9s. Reason: RUNNING
2024-07-11 04:41:31,674 Sleeping for 6s. Reason: RUNNING
2024-07-11 04:41:38,073 Sleeping for 10s. Reason: RUNNING
2024-07-11 04:41:48,489 Sleeping for 10s. Reason: RUNNING
2024-07-11 04:41:58,905 Sleeping for 7s. Reason: RUNNING
2024-07-11 04:42:06,326 Sleeping for 6s. Reason: RUNNING
2024-07-11 04:42:12,738 Sleeping for 7s. Reason: RUNNING
2024-07-11 04:42:20,147 Sleeping for 8s. Reason: RUNNING
2024-07-11 04:42:28,580 Sleeping for 10s. Reason: RUNNING
2024-07-11 04:42:38,979 Sleeping for 7s. Reason: RUNNING
2024-07-11 04:42:46,376 Sleeping for 5s. Reason: RUNNING
2024-07-11 04:42:51,782 Sleeping for 5s. Reason: RUNNING
2024-07-11 04:42:57,231 Sleeping for 7s. Reason: RUNNING
2024-07-11 04:43:04,646 Sleeping for 6s. Reason: RUNNING
2024-07-11 04:43:11,049 Sleeping for 7s. Reason: RUNNING
2024-07-11 04:43:18,460 Sleeping for 6s. Reason: RUNNING
2024-07-11 04:43:24,862 Sleeping for 7s. Reason: RUNNING
2024-07-11 04:43:32,273 Sleeping for 10s. Reason: RUNNING
2024-07-11 04:43:42,691 Sleeping for 10s. Reason: RUNNING
2024-07-11 04:43:53,101 Sleeping for 9s. Reason: RUNNING
2024-07-11 04:44:02,511 Sleeping for 8s. Reason: RUNNING
2024-07-11 04:44:10,923 Sleeping for 9s. Reason: RUNNING
2024-07-11 04:44:20,322 Sleeping for 8s. Reason: RUNNING
2024-07-11 04:44:28,722 Sleeping for 7s. Reason: RUNNING
2024-07-11 04:44:36,128 Sleeping for 9s. Reason: RUNNING
2024-07-11 04:44:45,557 Sleeping for 7s. Reason: RUNNING
2024-07-11 04:44:52,979 Sleeping for 5s. Reason: RUNNING
2024-07-11 04:45:04,427 Setting max_seq=508, max_extra_seq=2048
2024-07-11 04:51:52,303 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=39.4 pTM=0.324 ipTM=0.267
2024-07-11 04:55:30,832 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=39.2 pTM=0.316 ipTM=0.226 tol=17
2024-07-11 04:59:09,408 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=38.7 pTM=0.314 ipTM=0.225 tol=13.5
2024-07-11 05:02:48,090 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=38.9 pTM=0.314 ipTM=0.222 tol=9.39
2024-07-11 05:06:26,810 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=38.7 pTM=0.316 ipTM=0.225 tol=11.5
2024-07-11 05:10:05,653 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=38.7 pTM=0.316 ipTM=0.221 tol=8.45
2024-07-11 05:13:44,398 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=38.5 pTM=0.314 ipTM=0.222 tol=6.95
2024-07-11 05:17:23,249 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=38.5 pTM=0.315 ipTM=0.221 tol=6.89
2024-07-11 05:21:02,056 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=38.7 pTM=0.314 ipTM=0.267 tol=10.5
2024-07-11 05:24:40,941 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=38.9 pTM=0.314 ipTM=0.223 tol=11.3
2024-07-11 05:28:19,905 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=38.7 pTM=0.314 ipTM=0.215 tol=22
2024-07-11 05:31:58,784 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=38.5 pTM=0.314 ipTM=0.216 tol=18.4
2024-07-11 05:35:37,692 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=38.8 pTM=0.317 ipTM=0.253 tol=12.7
2024-07-11 05:39:16,607 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=38.8 pTM=0.316 ipTM=0.22 tol=8.21
2024-07-11 05:42:55,533 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=38.8 pTM=0.316 ipTM=0.222 tol=8.77
2024-07-11 05:46:34,385 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=38.8 pTM=0.318 ipTM=0.226 tol=13.7
2024-07-11 05:50:13,184 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=39.1 pTM=0.33 ipTM=0.268 tol=12.5
2024-07-11 05:53:52,068 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=39.2 pTM=0.317 ipTM=0.227 tol=10
2024-07-11 05:57:30,892 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=38.8 pTM=0.317 ipTM=0.235 tol=8.61
2024-07-11 06:01:09,790 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=39 pTM=0.315 ipTM=0.225 tol=9
2024-07-11 06:04:48,705 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=39 pTM=0.315 ipTM=0.228 tol=9.96
2024-07-11 06:08:27,586 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=39.2 pTM=0.319 ipTM=0.237 tol=9.45
2024-07-11 06:12:06,517 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=39.1 pTM=0.315 ipTM=0.225 tol=7.69
2024-07-11 06:15:45,353 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=38.8 pTM=0.316 ipTM=0.227 tol=9.77
2024-07-11 06:19:24,163 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=39 pTM=0.317 ipTM=0.229 tol=11.3
2024-07-11 06:23:02,992 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=39.1 pTM=0.316 ipTM=0.239 tol=8.8
2024-07-11 06:26:41,802 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=38.9 pTM=0.316 ipTM=0.223 tol=8.3
2024-07-11 06:30:20,667 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=39 pTM=0.315 ipTM=0.226 tol=5.65
2024-07-11 06:33:59,467 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=39 pTM=0.318 ipTM=0.244 tol=7.1
2024-07-11 06:37:38,195 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=39.3 pTM=0.316 ipTM=0.226 tol=7.08
2024-07-11 06:41:16,967 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=39.1 pTM=0.317 ipTM=0.226 tol=8.3
2024-07-11 06:41:16,969 alphafold2_multimer_v3_model_1_seed_000 took 6967.5s (30 recycles)
2024-07-11 06:44:58,131 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=39.4 pTM=0.407 ipTM=0.486
2024-07-11 06:48:36,604 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=41.1 pTM=0.408 ipTM=0.5 tol=17.4
2024-07-11 06:52:15,086 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=40.4 pTM=0.35 ipTM=0.294 tol=17.1
2024-07-11 06:55:53,597 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=40.4 pTM=0.357 ipTM=0.32 tol=10.8
2024-07-11 06:59:32,123 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=40.4 pTM=0.363 ipTM=0.338 tol=12
2024-07-11 07:03:10,738 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=40.4 pTM=0.339 ipTM=0.255 tol=9.23
2024-07-11 07:06:49,330 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=40.3 pTM=0.355 ipTM=0.32 tol=10.4
2024-07-11 07:10:27,986 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=40.2 pTM=0.337 ipTM=0.256 tol=6.36
2024-07-11 07:14:06,634 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=40.4 pTM=0.342 ipTM=0.265 tol=6.53
2024-07-11 07:17:45,292 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=40.1 pTM=0.332 ipTM=0.237 tol=12
2024-07-11 07:21:23,929 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=40.2 pTM=0.34 ipTM=0.257 tol=11
2024-07-11 07:25:02,575 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=40.2 pTM=0.333 ipTM=0.241 tol=12.1
2024-07-11 07:28:41,253 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=40.3 pTM=0.336 ipTM=0.245 tol=9.82
2024-07-11 07:32:19,920 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=40.4 pTM=0.34 ipTM=0.264 tol=9.83
2024-07-11 07:35:58,616 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=40.3 pTM=0.329 ipTM=0.242 tol=8.09
2024-07-11 07:39:37,287 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=40.2 pTM=0.336 ipTM=0.245 tol=6.2
2024-07-11 07:43:15,961 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=40.2 pTM=0.331 ipTM=0.24 tol=6.65
2024-07-11 07:46:54,522 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=40.2 pTM=0.333 ipTM=0.24 tol=6.86
2024-07-11 07:50:33,110 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=40.5 pTM=0.335 ipTM=0.248 tol=7.09
2024-07-11 07:54:11,814 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=40.2 pTM=0.331 ipTM=0.244 tol=6.8
2024-07-11 07:57:50,437 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=40.2 pTM=0.334 ipTM=0.24 tol=5.07
2024-07-11 08:01:29,097 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=40.2 pTM=0.335 ipTM=0.245 tol=7.6
2024-07-11 08:05:07,741 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=40.2 pTM=0.332 ipTM=0.234 tol=6.27
2024-07-11 08:08:46,397 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=40.3 pTM=0.332 ipTM=0.232 tol=6.76
2024-07-11 08:12:25,001 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=40.2 pTM=0.337 ipTM=0.246 tol=5.52
2024-07-11 08:16:03,643 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=40.2 pTM=0.33 ipTM=0.234 tol=5.33
2024-07-11 08:19:42,374 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=40.1 pTM=0.335 ipTM=0.243 tol=9.62
2024-07-11 08:23:21,128 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=40.2 pTM=0.331 ipTM=0.233 tol=9.02
2024-07-11 08:26:59,786 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=40.1 pTM=0.337 ipTM=0.251 tol=5.44
2024-07-11 08:30:38,408 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=40.2 pTM=0.332 ipTM=0.231 tol=4.83
2024-07-11 08:34:17,034 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=40.2 pTM=0.337 ipTM=0.249 tol=5.45
2024-07-11 08:34:17,036 alphafold2_multimer_v3_model_2_seed_000 took 6777.1s (30 recycles)
2024-07-11 08:37:59,318 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=38.1 pTM=0.332 ipTM=0.236
2024-07-11 08:41:39,018 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=38.2 pTM=0.319 ipTM=0.216 tol=35.6
2024-07-11 08:45:18,750 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=38 pTM=0.319 ipTM=0.208 tol=24.4
2024-07-11 08:48:58,509 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=38.2 pTM=0.319 ipTM=0.212 tol=21.9
2024-07-11 08:52:38,143 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=38.3 pTM=0.33 ipTM=0.255 tol=16.6
2024-07-11 08:56:17,897 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=38.1 pTM=0.32 ipTM=0.211 tol=16.5
2024-07-11 08:59:57,742 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=38 pTM=0.319 ipTM=0.209 tol=18.9
2024-07-11 09:03:37,528 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=38.2 pTM=0.318 ipTM=0.206 tol=17
2024-07-11 09:07:17,364 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=38.1 pTM=0.319 ipTM=0.24 tol=11.9
2024-07-11 09:10:57,148 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=38.5 pTM=0.343 ipTM=0.306 tol=20.9
2024-07-11 09:14:36,607 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=39.2 pTM=0.372 ipTM=0.398 tol=16.9
2024-07-11 09:18:15,999 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=38.7 pTM=0.344 ipTM=0.296 tol=12.2
2024-07-11 09:21:55,552 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=38.5 pTM=0.33 ipTM=0.242 tol=7.78
2024-07-11 09:25:35,315 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=38.4 pTM=0.324 ipTM=0.215 tol=8.58
2024-07-11 09:29:15,127 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=38 pTM=0.321 ipTM=0.214 tol=14.1
2024-07-11 09:32:54,915 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=39.3 pTM=0.383 ipTM=0.441 tol=29.4
2024-07-11 09:36:34,353 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=39.5 pTM=0.385 ipTM=0.439 tol=16.4
2024-07-11 09:40:13,904 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=39.7 pTM=0.391 ipTM=0.453 tol=10.9
2024-07-11 09:43:53,458 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=39.8 pTM=0.393 ipTM=0.461 tol=10.4
2024-07-11 09:47:32,978 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=40 pTM=0.396 ipTM=0.461 tol=10.3
2024-07-11 09:51:12,612 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=40 pTM=0.393 ipTM=0.461 tol=9.38
2024-07-11 09:54:52,253 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=40 pTM=0.393 ipTM=0.464 tol=12
2024-07-11 09:58:31,768 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=39.2 pTM=0.398 ipTM=0.468 tol=29.1
2024-07-11 10:02:11,341 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=39.5 pTM=0.394 ipTM=0.46 tol=23.9
2024-07-11 10:05:50,868 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=39.8 pTM=0.395 ipTM=0.464 tol=12.3
2024-07-11 10:09:30,316 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=40.2 pTM=0.398 ipTM=0.466 tol=15.2
2024-07-11 10:13:09,820 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=40 pTM=0.396 ipTM=0.468 tol=7.18
2024-07-11 10:16:49,353 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=39.8 pTM=0.394 ipTM=0.464 tol=5.97
2024-07-11 10:20:28,841 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=40.2 pTM=0.398 ipTM=0.47 tol=5.81
2024-07-11 10:24:08,290 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=40.2 pTM=0.396 ipTM=0.471 tol=5.71
2024-07-11 10:27:47,829 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=40.1 pTM=0.396 ipTM=0.47 tol=6.08
2024-07-11 10:27:47,832 alphafold2_multimer_v3_model_3_seed_000 took 6807.9s (30 recycles)
2024-07-11 10:31:29,916 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=37.2 pTM=0.353 ipTM=0.312
2024-07-11 10:35:09,474 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=38.3 pTM=0.339 ipTM=0.261 tol=19.2
2024-07-11 10:38:49,107 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=38.4 pTM=0.33 ipTM=0.257 tol=18
2024-07-11 10:42:28,748 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=38.4 pTM=0.34 ipTM=0.273 tol=14.6
2024-07-11 10:46:08,704 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=38.1 pTM=0.329 ipTM=0.247 tol=14.4
2024-07-11 10:49:48,659 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=38 pTM=0.326 ipTM=0.257 tol=13.6
2024-07-11 10:53:28,542 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=37.8 pTM=0.328 ipTM=0.248 tol=10.8
2024-07-11 10:57:08,447 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=38 pTM=0.327 ipTM=0.248 tol=10.2
2024-07-11 11:00:48,312 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=38 pTM=0.326 ipTM=0.24 tol=14.7
2024-07-11 11:04:28,177 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=38.1 pTM=0.33 ipTM=0.242 tol=12.8
2024-07-11 11:08:08,033 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=38.2 pTM=0.326 ipTM=0.249 tol=14.3
2024-07-11 11:11:47,982 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=38.1 pTM=0.326 ipTM=0.259 tol=11.2
2024-07-11 11:15:27,689 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=38.6 pTM=0.359 ipTM=0.354 tol=13.5
2024-07-11 11:19:07,510 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=38.8 pTM=0.331 ipTM=0.267 tol=13.6
2024-07-11 11:22:47,283 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=38.2 pTM=0.326 ipTM=0.249 tol=14.1
2024-07-11 11:26:27,031 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=38.2 pTM=0.336 ipTM=0.261 tol=15.9
2024-07-11 11:30:06,942 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=38 pTM=0.327 ipTM=0.237 tol=15.9
2024-07-11 11:33:46,853 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=38 pTM=0.323 ipTM=0.232 tol=14.6
2024-07-11 11:37:26,622 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=38.5 pTM=0.345 ipTM=0.306 tol=14.4
2024-07-11 11:41:06,451 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=38.3 pTM=0.327 ipTM=0.245 tol=13.3
2024-07-11 11:44:46,400 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=38.1 pTM=0.324 ipTM=0.245 tol=14.1
2024-07-11 11:48:26,297 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=38.1 pTM=0.33 ipTM=0.241 tol=13.6
2024-07-11 11:52:06,264 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=38.1 pTM=0.324 ipTM=0.227 tol=10.7
2024-07-11 11:55:46,221 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=37.9 pTM=0.325 ipTM=0.213 tol=13.4
2024-07-11 11:59:25,993 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=38.1 pTM=0.339 ipTM=0.279 tol=14.9
2024-07-11 12:03:05,868 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=38.1 pTM=0.326 ipTM=0.244 tol=14.3
2024-07-11 12:06:45,908 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=37.6 pTM=0.325 ipTM=0.224 tol=12.2
2024-07-11 12:10:25,826 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=37.6 pTM=0.325 ipTM=0.218 tol=9.05
2024-07-11 12:14:05,793 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=37.7 pTM=0.324 ipTM=0.223 tol=12.7
2024-07-11 12:17:45,630 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=37.6 pTM=0.326 ipTM=0.218 tol=12.7
2024-07-11 12:21:25,641 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=37.7 pTM=0.324 ipTM=0.211 tol=14.8
2024-07-11 12:21:25,643 alphafold2_multimer_v3_model_4_seed_000 took 6814.9s (30 recycles)
2024-07-11 12:25:08,147 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=37.8 pTM=0.329 ipTM=0.236
2024-07-11 12:28:47,813 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=38.3 pTM=0.324 ipTM=0.221 tol=18.8
2024-07-11 12:32:27,567 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=38.5 pTM=0.323 ipTM=0.216 tol=16.6
2024-07-11 12:36:07,504 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=38.2 pTM=0.32 ipTM=0.205 tol=29.2
2024-07-11 12:39:47,428 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=38.7 pTM=0.334 ipTM=0.258 tol=18.2
2024-07-11 12:43:27,235 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=38.7 pTM=0.33 ipTM=0.244 tol=14
2024-07-11 12:47:07,249 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=38.4 pTM=0.323 ipTM=0.219 tol=30.8
2024-07-11 12:50:47,217 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=38.4 pTM=0.32 ipTM=0.211 tol=16.1
2024-07-11 12:54:27,163 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=38.7 pTM=0.32 ipTM=0.208 tol=12.2
2024-07-11 12:58:07,125 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=39 pTM=0.348 ipTM=0.302 tol=28.6
2024-07-11 13:01:46,972 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=39.6 pTM=0.371 ipTM=0.391 tol=17.8
2024-07-11 13:05:26,826 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=39.5 pTM=0.364 ipTM=0.369 tol=11.4
2024-07-11 13:09:06,724 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=39.2 pTM=0.349 ipTM=0.313 tol=14.1
2024-07-11 13:12:46,615 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=39.3 pTM=0.342 ipTM=0.281 tol=14.4
2024-07-11 13:16:26,694 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=38.3 pTM=0.321 ipTM=0.202 tol=24.9
2024-07-11 13:20:06,729 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=38.4 pTM=0.319 ipTM=0.219 tol=18.4
2024-07-11 13:23:46,586 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=38.8 pTM=0.322 ipTM=0.221 tol=15.5
2024-07-11 13:27:26,544 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=38.6 pTM=0.318 ipTM=0.204 tol=13.2
2024-07-11 13:31:06,567 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=38.7 pTM=0.32 ipTM=0.211 tol=26.8
2024-07-11 13:34:46,550 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=38.9 pTM=0.325 ipTM=0.229 tol=16.8
2024-07-11 13:38:26,527 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=38.3 pTM=0.321 ipTM=0.204 tol=23.2
2024-07-11 13:42:06,617 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=38.7 pTM=0.319 ipTM=0.211 tol=23.1
2024-07-11 13:45:46,503 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=39.1 pTM=0.335 ipTM=0.263 tol=18.2
2024-07-11 13:49:26,453 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=39 pTM=0.321 ipTM=0.213 tol=17.3
2024-07-11 13:53:06,440 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=39.2 pTM=0.361 ipTM=0.354 tol=30.7
2024-07-11 13:56:46,272 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=39.5 pTM=0.369 ipTM=0.391 tol=17.2
2024-07-11 14:00:26,134 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=39.5 pTM=0.365 ipTM=0.375 tol=16.1
2024-07-11 14:04:05,896 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=39.6 pTM=0.367 ipTM=0.374 tol=15.3
2024-07-11 14:07:45,719 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=39.6 pTM=0.361 ipTM=0.357 tol=12.9
2024-07-11 14:11:25,506 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=39.6 pTM=0.362 ipTM=0.353 tol=14.2
2024-07-11 14:15:05,323 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=39.5 pTM=0.359 ipTM=0.345 tol=14
2024-07-11 14:15:05,326 alphafold2_multimer_v3_model_5_seed_000 took 6816.8s (30 recycles)
2024-07-11 14:15:08,236 reranking models by 'multimer' metric
2024-07-11 14:15:10,477 Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
2024-07-11 14:22:23,773 Relaxation took 435.5s
2024-07-11 14:22:23,773 rank_001_alphafold2_multimer_v3_model_3_seed_000 pLDDT=40.1 pTM=0.396 ipTM=0.47
2024-07-11 14:27:45,573 Relaxation took 321.8s
2024-07-11 14:27:45,573 rank_002_alphafold2_multimer_v3_model_5_seed_000 pLDDT=39.5 pTM=0.359 ipTM=0.345
2024-07-11 14:32:28,946 Relaxation took 283.4s
2024-07-11 14:32:28,946 rank_003_alphafold2_multimer_v3_model_2_seed_000 pLDDT=40.2 pTM=0.337 ipTM=0.249
2024-07-11 14:39:08,238 Relaxation took 399.3s
2024-07-11 14:39:08,238 rank_004_alphafold2_multimer_v3_model_1_seed_000 pLDDT=39.1 pTM=0.317 ipTM=0.226
2024-07-11 14:47:40,322 Relaxation took 512.1s
2024-07-11 14:47:40,322 rank_005_alphafold2_multimer_v3_model_4_seed_000 pLDDT=37.7 pTM=0.324 ipTM=0.211
2024-07-11 14:47:51,764 Done