2024-07-11 04:34:49,603 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3)
2024-07-11 04:34:49,950 Running on GPU
2024-07-11 04:34:53,526 Found 6 citations for tools or databases
2024-07-11 04:34:53,526 Query 1/1: LRMDA_FAKD2 (length 908)
2024-07-11 04:34:53,975 Sleeping for 8s. Reason: PENDING
2024-07-11 04:35:02,369 Sleeping for 5s. Reason: RUNNING
2024-07-11 04:35:07,789 Sleeping for 9s. Reason: RUNNING
2024-07-11 04:35:17,209 Sleeping for 9s. Reason: RUNNING
2024-07-11 04:35:26,610 Sleeping for 8s. Reason: RUNNING
2024-07-11 04:35:35,017 Sleeping for 9s. Reason: RUNNING
2024-07-11 04:35:44,423 Sleeping for 6s. Reason: RUNNING
2024-07-11 04:35:50,829 Sleeping for 9s. Reason: RUNNING
2024-07-11 04:36:00,238 Sleeping for 9s. Reason: RUNNING
2024-07-11 04:36:09,653 Sleeping for 5s. Reason: RUNNING
2024-07-11 04:36:16,519 Sleeping for 9s. Reason: PENDING
2024-07-11 04:36:25,927 Sleeping for 8s. Reason: RUNNING
2024-07-11 04:36:34,331 Sleeping for 10s. Reason: RUNNING
2024-07-11 04:36:44,739 Sleeping for 9s. Reason: RUNNING
2024-07-11 04:36:54,165 Sleeping for 5s. Reason: RUNNING
2024-07-11 04:37:01,325 Setting max_seq=508, max_extra_seq=2048
2024-07-11 04:39:28,427 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=67.9 pTM=0.588 ipTM=0.148
2024-07-11 04:39:45,729 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=67.5 pTM=0.596 ipTM=0.176 tol=11.9
2024-07-11 04:40:03,046 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=67 pTM=0.594 ipTM=0.157 tol=4.47
2024-07-11 04:40:20,404 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=67.4 pTM=0.589 ipTM=0.153 tol=3.98
2024-07-11 04:40:37,785 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=67.5 pTM=0.59 ipTM=0.153 tol=3.46
2024-07-11 04:40:55,190 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=67.4 pTM=0.591 ipTM=0.156 tol=4.5
2024-07-11 04:41:12,594 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=67.4 pTM=0.593 ipTM=0.159 tol=5.24
2024-07-11 04:41:30,015 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=67.3 pTM=0.596 ipTM=0.17 tol=5.83
2024-07-11 04:41:47,441 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=67 pTM=0.599 ipTM=0.188 tol=2.71
2024-07-11 04:42:04,900 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=67.2 pTM=0.611 ipTM=0.235 tol=3.7
2024-07-11 04:42:22,362 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=67.3 pTM=0.613 ipTM=0.242 tol=2.95
2024-07-11 04:42:39,822 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=66.9 pTM=0.612 ipTM=0.242 tol=2.19
2024-07-11 04:42:57,283 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=67 pTM=0.612 ipTM=0.24 tol=3.48
2024-07-11 04:43:14,749 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=67 pTM=0.61 ipTM=0.231 tol=3.51
2024-07-11 04:43:32,219 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=67.1 pTM=0.607 ipTM=0.216 tol=2.55
2024-07-11 04:43:49,679 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=66.9 pTM=0.609 ipTM=0.222 tol=2.69
2024-07-11 04:44:07,119 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=66.7 pTM=0.611 ipTM=0.24 tol=2.5
2024-07-11 04:44:24,587 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=66.8 pTM=0.613 ipTM=0.244 tol=1.81
2024-07-11 04:44:42,052 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=66.8 pTM=0.61 ipTM=0.228 tol=1.46
2024-07-11 04:44:59,511 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=66.6 pTM=0.61 ipTM=0.235 tol=1.8
2024-07-11 04:45:16,973 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=66.7 pTM=0.605 ipTM=0.221 tol=1.88
2024-07-11 04:45:34,441 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=66.6 pTM=0.606 ipTM=0.217 tol=2.06
2024-07-11 04:45:51,899 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=66.8 pTM=0.605 ipTM=0.211 tol=2.63
2024-07-11 04:46:09,378 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=66.8 pTM=0.606 ipTM=0.212 tol=3.27
2024-07-11 04:46:26,830 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=66.9 pTM=0.605 ipTM=0.212 tol=4.55
2024-07-11 04:46:44,305 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=66.9 pTM=0.607 ipTM=0.212 tol=5.25
2024-07-11 04:47:01,763 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=66.7 pTM=0.602 ipTM=0.2 tol=3.69
2024-07-11 04:47:19,219 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=66.7 pTM=0.603 ipTM=0.201 tol=2.57
2024-07-11 04:47:36,661 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=67 pTM=0.616 ipTM=0.273 tol=2.83
2024-07-11 04:47:54,113 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=67.2 pTM=0.62 ipTM=0.279 tol=2.71
2024-07-11 04:48:11,576 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=66.8 pTM=0.612 ipTM=0.24 tol=2.35
2024-07-11 04:48:11,577 alphafold2_multimer_v3_model_1_seed_000 took 663.1s (30 recycles)
2024-07-11 04:48:29,625 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=68 pTM=0.603 ipTM=0.174
2024-07-11 04:48:47,170 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=68.5 pTM=0.616 ipTM=0.22 tol=10.9
2024-07-11 04:49:04,711 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=68.1 pTM=0.615 ipTM=0.225 tol=5.16
2024-07-11 04:49:22,235 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=68.1 pTM=0.613 ipTM=0.226 tol=3
2024-07-11 04:49:39,779 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=68.2 pTM=0.612 ipTM=0.212 tol=4.11
2024-07-11 04:49:57,317 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=68.2 pTM=0.611 ipTM=0.211 tol=3.44
2024-07-11 04:50:14,859 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=68.6 pTM=0.61 ipTM=0.207 tol=5.7
2024-07-11 04:50:32,378 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=68.7 pTM=0.611 ipTM=0.215 tol=3.41
2024-07-11 04:50:49,904 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=68.8 pTM=0.611 ipTM=0.217 tol=1.69
2024-07-11 04:51:07,427 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=68.6 pTM=0.61 ipTM=0.214 tol=1.63
2024-07-11 04:51:24,954 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=68.9 pTM=0.611 ipTM=0.216 tol=2.56
2024-07-11 04:51:42,467 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=68.6 pTM=0.61 ipTM=0.214 tol=2.01
2024-07-11 04:51:59,994 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=68.8 pTM=0.611 ipTM=0.22 tol=1.64
2024-07-11 04:52:17,514 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=68.7 pTM=0.61 ipTM=0.215 tol=3.96
2024-07-11 04:52:35,025 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=68.7 pTM=0.61 ipTM=0.219 tol=5.43
2024-07-11 04:52:52,551 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=68.6 pTM=0.611 ipTM=0.217 tol=5.05
2024-07-11 04:53:10,082 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=68.7 pTM=0.609 ipTM=0.216 tol=5.02
2024-07-11 04:53:27,607 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=68.6 pTM=0.61 ipTM=0.213 tol=4.05
2024-07-11 04:53:45,151 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=68.7 pTM=0.61 ipTM=0.219 tol=4.66
2024-07-11 04:54:02,673 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=68.7 pTM=0.609 ipTM=0.218 tol=5.66
2024-07-11 04:54:20,186 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=68.9 pTM=0.609 ipTM=0.224 tol=4.96
2024-07-11 04:54:37,717 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=68.8 pTM=0.611 ipTM=0.219 tol=5.38
2024-07-11 04:54:55,216 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=68.8 pTM=0.609 ipTM=0.219 tol=2.41
2024-07-11 04:55:12,743 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=68.8 pTM=0.61 ipTM=0.215 tol=1.2
2024-07-11 04:55:30,253 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=68.8 pTM=0.61 ipTM=0.223 tol=2.63
2024-07-11 04:55:47,773 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=68.8 pTM=0.61 ipTM=0.216 tol=4.5
2024-07-11 04:56:05,271 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=68.7 pTM=0.609 ipTM=0.214 tol=4.93
2024-07-11 04:56:22,799 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=68.6 pTM=0.609 ipTM=0.209 tol=2.38
2024-07-11 04:56:40,311 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=68.6 pTM=0.609 ipTM=0.215 tol=3.85
2024-07-11 04:56:57,818 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=68.6 pTM=0.609 ipTM=0.213 tol=2.34
2024-07-11 04:57:15,339 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=68.7 pTM=0.61 ipTM=0.216 tol=4.02
2024-07-11 04:57:15,340 alphafold2_multimer_v3_model_2_seed_000 took 543.2s (30 recycles)
2024-07-11 04:57:33,458 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=68.1 pTM=0.594 ipTM=0.178
2024-07-11 04:57:51,027 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=68.4 pTM=0.593 ipTM=0.144 tol=12.9
2024-07-11 04:58:08,546 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=70.2 pTM=0.653 ipTM=0.416 tol=16.8
2024-07-11 04:58:26,046 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=70.6 pTM=0.653 ipTM=0.422 tol=4.43
2024-07-11 04:58:43,564 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=70.9 pTM=0.666 ipTM=0.466 tol=2.81
2024-07-11 04:59:01,073 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=71.2 pTM=0.675 ipTM=0.505 tol=3.52
2024-07-11 04:59:18,579 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=71.3 pTM=0.675 ipTM=0.508 tol=2.95
2024-07-11 04:59:36,092 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=71.6 pTM=0.679 ipTM=0.523 tol=3.75
2024-07-11 04:59:53,602 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=71.3 pTM=0.677 ipTM=0.518 tol=3.21
2024-07-11 05:00:11,138 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=71.4 pTM=0.674 ipTM=0.503 tol=2.73
2024-07-11 05:00:28,671 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=71.3 pTM=0.671 ipTM=0.489 tol=3.97
2024-07-11 05:00:46,191 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=71 pTM=0.666 ipTM=0.479 tol=3.38
2024-07-11 05:01:03,728 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=71.2 pTM=0.674 ipTM=0.503 tol=1.86
2024-07-11 05:01:21,240 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=71.3 pTM=0.675 ipTM=0.513 tol=2.9
2024-07-11 05:01:38,759 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=71.2 pTM=0.671 ipTM=0.502 tol=2.98
2024-07-11 05:01:56,285 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=71.3 pTM=0.678 ipTM=0.519 tol=0.833
2024-07-11 05:02:13,793 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=71.1 pTM=0.673 ipTM=0.511 tol=2.14
2024-07-11 05:02:31,317 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=71.2 pTM=0.676 ipTM=0.503 tol=2.31
2024-07-11 05:02:48,825 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=71.4 pTM=0.675 ipTM=0.504 tol=0.903
2024-07-11 05:03:06,333 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=71.1 pTM=0.673 ipTM=0.5 tol=1.05
2024-07-11 05:03:23,819 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=71.1 pTM=0.674 ipTM=0.516 tol=1.33
2024-07-11 05:03:41,315 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=71.3 pTM=0.675 ipTM=0.513 tol=3.2
2024-07-11 05:03:58,812 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=71.1 pTM=0.673 ipTM=0.506 tol=3.96
2024-07-11 05:04:16,308 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=71.2 pTM=0.675 ipTM=0.513 tol=0.678
2024-07-11 05:04:33,794 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=71.1 pTM=0.671 ipTM=0.498 tol=1.34
2024-07-11 05:04:51,301 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=71.2 pTM=0.671 ipTM=0.491 tol=0.902
2024-07-11 05:05:08,799 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=71.1 pTM=0.668 ipTM=0.479 tol=0.771
2024-07-11 05:05:26,304 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=70.9 pTM=0.667 ipTM=0.478 tol=0.612
2024-07-11 05:05:43,796 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=70.8 pTM=0.664 ipTM=0.468 tol=0.714
2024-07-11 05:06:01,327 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=71.1 pTM=0.67 ipTM=0.485 tol=0.513
2024-07-11 05:06:18,823 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=71 pTM=0.668 ipTM=0.477 tol=1.24
2024-07-11 05:06:18,824 alphafold2_multimer_v3_model_3_seed_000 took 543.0s (30 recycles)
2024-07-11 05:06:36,864 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=66.2 pTM=0.6 ipTM=0.19
2024-07-11 05:06:54,381 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=66.1 pTM=0.611 ipTM=0.216 tol=7.8
2024-07-11 05:07:11,889 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=66.2 pTM=0.604 ipTM=0.204 tol=8.91
2024-07-11 05:07:29,364 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=66.1 pTM=0.605 ipTM=0.207 tol=5.58
2024-07-11 05:07:46,861 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=66.3 pTM=0.603 ipTM=0.2 tol=3.38
2024-07-11 05:08:04,353 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=66.2 pTM=0.606 ipTM=0.211 tol=2.89
2024-07-11 05:08:21,846 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=66.6 pTM=0.606 ipTM=0.205 tol=2.81
2024-07-11 05:08:39,332 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=66.2 pTM=0.603 ipTM=0.207 tol=3.29
2024-07-11 05:08:56,820 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=66.1 pTM=0.602 ipTM=0.205 tol=2.9
2024-07-11 05:09:14,297 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=66.2 pTM=0.604 ipTM=0.209 tol=2.37
2024-07-11 05:09:31,804 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=66.5 pTM=0.603 ipTM=0.207 tol=2.48
2024-07-11 05:09:49,294 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=66.2 pTM=0.603 ipTM=0.205 tol=2.25
2024-07-11 05:10:06,796 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=66.2 pTM=0.603 ipTM=0.209 tol=2.71
2024-07-11 05:10:24,287 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=66.2 pTM=0.603 ipTM=0.207 tol=3.47
2024-07-11 05:10:41,790 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=66.3 pTM=0.601 ipTM=0.205 tol=2.46
2024-07-11 05:10:59,269 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=66.2 pTM=0.604 ipTM=0.211 tol=1.75
2024-07-11 05:11:16,762 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=65.9 pTM=0.604 ipTM=0.213 tol=3.01
2024-07-11 05:11:34,270 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=66.3 pTM=0.604 ipTM=0.208 tol=3.27
2024-07-11 05:11:51,766 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=66.1 pTM=0.605 ipTM=0.212 tol=3.1
2024-07-11 05:12:09,266 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=66.3 pTM=0.604 ipTM=0.216 tol=2.8
2024-07-11 05:12:26,754 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=66.1 pTM=0.602 ipTM=0.214 tol=3.2
2024-07-11 05:12:44,253 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=66.3 pTM=0.603 ipTM=0.212 tol=1.8
2024-07-11 05:13:01,743 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=65.9 pTM=0.6 ipTM=0.208 tol=2.59
2024-07-11 05:13:19,231 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=66.1 pTM=0.601 ipTM=0.206 tol=3.27
2024-07-11 05:13:36,720 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=66.1 pTM=0.6 ipTM=0.21 tol=2.53
2024-07-11 05:13:54,214 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=66.2 pTM=0.604 ipTM=0.209 tol=2.86
2024-07-11 05:14:11,689 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=66.1 pTM=0.601 ipTM=0.206 tol=2.65
2024-07-11 05:14:29,172 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=66.1 pTM=0.602 ipTM=0.207 tol=1.92
2024-07-11 05:14:46,651 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=65.9 pTM=0.601 ipTM=0.209 tol=2.12
2024-07-11 05:15:04,154 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=66.1 pTM=0.601 ipTM=0.207 tol=3.56
2024-07-11 05:15:21,640 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=66.1 pTM=0.601 ipTM=0.207 tol=3.54
2024-07-11 05:15:21,641 alphafold2_multimer_v3_model_4_seed_000 took 542.3s (30 recycles)
2024-07-11 05:15:39,713 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=67.9 pTM=0.595 ipTM=0.16
2024-07-11 05:15:57,271 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=67.9 pTM=0.602 ipTM=0.176 tol=7.72
2024-07-11 05:16:14,815 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=68 pTM=0.601 ipTM=0.169 tol=6.59
2024-07-11 05:16:32,369 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=68.5 pTM=0.607 ipTM=0.195 tol=6
2024-07-11 05:16:49,935 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=68.2 pTM=0.605 ipTM=0.18 tol=5.13
2024-07-11 05:17:07,498 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=68.2 pTM=0.604 ipTM=0.177 tol=4.08
2024-07-11 05:17:25,068 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=68.4 pTM=0.602 ipTM=0.164 tol=5.82
2024-07-11 05:17:42,639 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=68.1 pTM=0.606 ipTM=0.189 tol=2.67
2024-07-11 05:18:00,207 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=68.1 pTM=0.604 ipTM=0.176 tol=4.81
2024-07-11 05:18:17,784 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=68.1 pTM=0.603 ipTM=0.174 tol=2.79
2024-07-11 05:18:35,386 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=68.3 pTM=0.604 ipTM=0.171 tol=2.83
2024-07-11 05:18:52,972 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=68.1 pTM=0.605 ipTM=0.183 tol=1.9
2024-07-11 05:19:10,565 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=67.9 pTM=0.604 ipTM=0.175 tol=4.19
2024-07-11 05:19:28,161 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=68 pTM=0.604 ipTM=0.179 tol=2.34
2024-07-11 05:19:45,757 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=68.1 pTM=0.603 ipTM=0.172 tol=3.68
2024-07-11 05:20:03,341 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=68.1 pTM=0.603 ipTM=0.169 tol=1.61
2024-07-11 05:20:20,916 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=67.9 pTM=0.604 ipTM=0.177 tol=2.27
2024-07-11 05:20:38,505 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=68.1 pTM=0.606 ipTM=0.181 tol=2.15
2024-07-11 05:20:56,104 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=67.9 pTM=0.605 ipTM=0.18 tol=4.29
2024-07-11 05:21:13,668 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=68.1 pTM=0.609 ipTM=0.206 tol=7.77
2024-07-11 05:21:31,256 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=68.1 pTM=0.604 ipTM=0.176 tol=7.98
2024-07-11 05:21:48,835 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=68.3 pTM=0.603 ipTM=0.174 tol=7.32
2024-07-11 05:22:06,412 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=68.2 pTM=0.612 ipTM=0.215 tol=5.71
2024-07-11 05:22:24,013 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=67.9 pTM=0.606 ipTM=0.182 tol=4.09
2024-07-11 05:22:41,579 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=68.1 pTM=0.605 ipTM=0.184 tol=3.55
2024-07-11 05:22:59,157 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=68.1 pTM=0.607 ipTM=0.186 tol=3.34
2024-07-11 05:23:16,737 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=68.1 pTM=0.604 ipTM=0.176 tol=2.47
2024-07-11 05:23:34,301 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=68.1 pTM=0.608 ipTM=0.198 tol=2.09
2024-07-11 05:23:51,879 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=68.1 pTM=0.605 ipTM=0.184 tol=1.81
2024-07-11 05:24:09,458 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=67.9 pTM=0.603 ipTM=0.174 tol=2.79
2024-07-11 05:24:27,018 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=68 pTM=0.602 ipTM=0.172 tol=5.25
2024-07-11 05:24:27,019 alphafold2_multimer_v3_model_5_seed_000 took 544.9s (30 recycles)
2024-07-11 05:24:27,534 reranking models by 'multimer' metric
2024-07-11 05:24:30,720 Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
2024-07-11 05:25:34,196 Relaxation took 66.7s
2024-07-11 05:25:34,196 rank_001_alphafold2_multimer_v3_model_3_seed_000 pLDDT=71 pTM=0.668 ipTM=0.477
2024-07-11 05:26:35,936 Relaxation took 61.7s
2024-07-11 05:26:35,936 rank_002_alphafold2_multimer_v3_model_1_seed_000 pLDDT=66.8 pTM=0.612 ipTM=0.24
2024-07-11 05:27:43,508 Relaxation took 67.6s
2024-07-11 05:27:43,509 rank_003_alphafold2_multimer_v3_model_2_seed_000 pLDDT=68.7 pTM=0.61 ipTM=0.216
2024-07-11 05:28:53,120 Relaxation took 69.6s
2024-07-11 05:28:53,120 rank_004_alphafold2_multimer_v3_model_4_seed_000 pLDDT=66.1 pTM=0.601 ipTM=0.207
2024-07-11 05:30:16,418 Relaxation took 83.3s
2024-07-11 05:30:16,418 rank_005_alphafold2_multimer_v3_model_5_seed_000 pLDDT=68 pTM=0.602 ipTM=0.172
2024-07-11 05:30:18,033 Done