2024-07-11 06:02:28,481 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3) 2024-07-11 06:02:28,806 Running on GPU 2024-07-11 06:02:32,525 Found 6 citations for tools or databases 2024-07-11 06:02:32,526 Query 1/1: LV746_EYA2 (length 655) 2024-07-11 06:02:32,986 Sleeping for 6s. Reason: PENDING 2024-07-11 06:02:39,397 Sleeping for 7s. Reason: RUNNING 2024-07-11 06:02:46,816 Sleeping for 9s. Reason: RUNNING 2024-07-11 06:02:56,221 Sleeping for 9s. Reason: RUNNING 2024-07-11 06:03:05,629 Sleeping for 5s. Reason: RUNNING 2024-07-11 06:03:11,042 Sleeping for 6s. Reason: RUNNING 2024-07-11 06:03:17,448 Sleeping for 5s. Reason: RUNNING 2024-07-11 06:03:24,403 Sleeping for 8s. Reason: PENDING 2024-07-11 06:03:32,806 Sleeping for 5s. Reason: RUNNING 2024-07-11 06:03:38,200 Sleeping for 9s. Reason: RUNNING 2024-07-11 06:03:47,613 Sleeping for 7s. Reason: RUNNING 2024-07-11 06:03:56,693 Setting max_seq=508, max_extra_seq=2048 2024-07-11 06:06:42,507 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=56.3 pTM=0.506 ipTM=0.545 2024-07-11 06:06:51,262 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=55.5 pTM=0.457 ipTM=0.365 tol=15.1 2024-07-11 06:07:00,010 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=54.4 pTM=0.451 ipTM=0.249 tol=12.8 2024-07-11 06:07:08,784 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=54.8 pTM=0.454 ipTM=0.197 tol=12.1 2024-07-11 06:07:17,559 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=55.1 pTM=0.456 ipTM=0.414 tol=7.13 2024-07-11 06:07:26,343 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=54.9 pTM=0.456 ipTM=0.389 tol=6.02 2024-07-11 06:07:35,141 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=55 pTM=0.455 ipTM=0.252 tol=8.76 2024-07-11 06:07:43,942 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=55.2 pTM=0.457 ipTM=0.416 tol=6.51 2024-07-11 06:07:52,749 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=55.1 pTM=0.457 ipTM=0.341 tol=4.89 2024-07-11 06:08:01,566 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=55.2 pTM=0.457 ipTM=0.28 tol=4.25 2024-07-11 06:08:10,387 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=55.2 pTM=0.454 ipTM=0.412 tol=6.21 2024-07-11 06:08:19,215 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=55.2 pTM=0.456 ipTM=0.384 tol=4.82 2024-07-11 06:08:28,046 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=55.4 pTM=0.455 ipTM=0.439 tol=4.36 2024-07-11 06:08:36,885 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=55.4 pTM=0.455 ipTM=0.394 tol=3.97 2024-07-11 06:08:45,724 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=55.5 pTM=0.456 ipTM=0.423 tol=3.73 2024-07-11 06:08:54,559 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=55.5 pTM=0.456 ipTM=0.332 tol=3.48 2024-07-11 06:09:03,399 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=55.6 pTM=0.457 ipTM=0.43 tol=2.36 2024-07-11 06:09:12,245 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=55.5 pTM=0.455 ipTM=0.447 tol=3.48 2024-07-11 06:09:21,089 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=55.5 pTM=0.459 ipTM=0.479 tol=3.1 2024-07-11 06:09:29,942 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=55.9 pTM=0.453 ipTM=0.413 tol=4.75 2024-07-11 06:09:38,781 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=55.5 pTM=0.461 ipTM=0.448 tol=4.11 2024-07-11 06:09:47,628 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=55.6 pTM=0.454 ipTM=0.394 tol=4.71 2024-07-11 06:09:56,476 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=55.4 pTM=0.457 ipTM=0.437 tol=4.06 2024-07-11 06:10:05,330 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=55.6 pTM=0.454 ipTM=0.428 tol=2.08 2024-07-11 06:10:14,179 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=55.7 pTM=0.468 ipTM=0.432 tol=2.4 2024-07-11 06:10:23,038 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=56 pTM=0.455 ipTM=0.346 tol=5 2024-07-11 06:10:31,895 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=55.5 pTM=0.456 ipTM=0.419 tol=4.38 2024-07-11 06:10:40,751 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=55.2 pTM=0.454 ipTM=0.403 tol=3.3 2024-07-11 06:10:49,599 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=55.2 pTM=0.459 ipTM=0.432 tol=2.51 2024-07-11 06:10:58,461 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=55.2 pTM=0.452 ipTM=0.312 tol=6 2024-07-11 06:11:07,327 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=54.9 pTM=0.453 ipTM=0.466 tol=9.26 2024-07-11 06:11:07,327 alphafold2_multimer_v3_model_1_seed_000 took 425.5s (30 recycles) 2024-07-11 06:11:16,441 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=55.3 pTM=0.481 ipTM=0.652 2024-07-11 06:11:25,309 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=55.5 pTM=0.465 ipTM=0.612 tol=8.55 2024-07-11 06:11:34,178 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=55.5 pTM=0.47 ipTM=0.403 tol=6.22 2024-07-11 06:11:43,064 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=55.5 pTM=0.458 ipTM=0.465 tol=9.95 2024-07-11 06:11:51,936 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=55.8 pTM=0.467 ipTM=0.567 tol=11.2 2024-07-11 06:12:00,824 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=55.4 pTM=0.459 ipTM=0.441 tol=9.46 2024-07-11 06:12:09,708 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=55.7 pTM=0.467 ipTM=0.442 tol=6.1 2024-07-11 06:12:18,590 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=55.9 pTM=0.46 ipTM=0.516 tol=8.26 2024-07-11 06:12:27,469 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=56.2 pTM=0.467 ipTM=0.579 tol=4.38 2024-07-11 06:12:36,353 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=55.9 pTM=0.458 ipTM=0.534 tol=9.95 2024-07-11 06:12:45,232 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=56.1 pTM=0.473 ipTM=0.517 tol=8.22 2024-07-11 06:12:54,116 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=55.9 pTM=0.46 ipTM=0.485 tol=8.24 2024-07-11 06:13:02,997 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=56.4 pTM=0.472 ipTM=0.597 tol=5.39 2024-07-11 06:13:11,879 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=55.9 pTM=0.458 ipTM=0.518 tol=8.79 2024-07-11 06:13:20,760 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=56.3 pTM=0.472 ipTM=0.592 tol=9.49 2024-07-11 06:13:29,637 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=56 pTM=0.458 ipTM=0.486 tol=5.87 2024-07-11 06:13:38,511 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=56.3 pTM=0.472 ipTM=0.528 tol=5.57 2024-07-11 06:13:47,401 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=56 pTM=0.458 ipTM=0.488 tol=12.6 2024-07-11 06:13:56,284 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=56.1 pTM=0.464 ipTM=0.496 tol=13 2024-07-11 06:14:05,174 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=55.8 pTM=0.459 ipTM=0.391 tol=4.77 2024-07-11 06:14:14,056 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=56.1 pTM=0.472 ipTM=0.476 tol=6.02 2024-07-11 06:14:22,942 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=55.7 pTM=0.459 ipTM=0.481 tol=13.5 2024-07-11 06:14:31,833 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=56.1 pTM=0.463 ipTM=0.528 tol=11.9 2024-07-11 06:14:40,731 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=55.8 pTM=0.459 ipTM=0.381 tol=5.37 2024-07-11 06:14:49,613 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=56.1 pTM=0.474 ipTM=0.427 tol=7.47 2024-07-11 06:14:58,508 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=55.5 pTM=0.458 ipTM=0.295 tol=7.4 2024-07-11 06:15:07,394 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=55.7 pTM=0.473 ipTM=0.247 tol=10.3 2024-07-11 06:15:16,289 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=55.5 pTM=0.458 ipTM=0.372 tol=9.14 2024-07-11 06:15:25,173 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=56 pTM=0.476 ipTM=0.384 tol=8.22 2024-07-11 06:15:34,077 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=55.8 pTM=0.458 ipTM=0.501 tol=10.6 2024-07-11 06:15:42,976 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=56.2 pTM=0.472 ipTM=0.567 tol=11.6 2024-07-11 06:15:42,977 alphafold2_multimer_v3_model_2_seed_000 took 275.4s (30 recycles) 2024-07-11 06:15:52,184 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=55.6 pTM=0.498 ipTM=0.538 2024-07-11 06:16:01,115 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=55.1 pTM=0.464 ipTM=0.461 tol=15.6 2024-07-11 06:16:10,060 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=56.3 pTM=0.467 ipTM=0.506 tol=9.84 2024-07-11 06:16:18,992 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=55.5 pTM=0.465 ipTM=0.519 tol=6.64 2024-07-11 06:16:27,921 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=55.5 pTM=0.47 ipTM=0.483 tol=4.76 2024-07-11 06:16:36,858 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=55.2 pTM=0.466 ipTM=0.442 tol=3.69 2024-07-11 06:16:45,783 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=55.2 pTM=0.47 ipTM=0.439 tol=3.79 2024-07-11 06:16:54,705 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=55 pTM=0.465 ipTM=0.492 tol=3.15 2024-07-11 06:17:03,626 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=55.3 pTM=0.472 ipTM=0.412 tol=2.39 2024-07-11 06:17:12,564 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=55.4 pTM=0.463 ipTM=0.449 tol=2.92 2024-07-11 06:17:21,492 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=55 pTM=0.472 ipTM=0.338 tol=3.45 2024-07-11 06:17:30,423 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=55.1 pTM=0.463 ipTM=0.291 tol=3.42 2024-07-11 06:17:39,351 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=55.2 pTM=0.473 ipTM=0.421 tol=3.95 2024-07-11 06:17:48,283 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=55.3 pTM=0.462 ipTM=0.369 tol=3.92 2024-07-11 06:17:57,209 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=55.5 pTM=0.476 ipTM=0.479 tol=3.77 2024-07-11 06:18:06,142 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=55.3 pTM=0.461 ipTM=0.387 tol=3.25 2024-07-11 06:18:15,061 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=55.4 pTM=0.477 ipTM=0.393 tol=4.14 2024-07-11 06:18:23,990 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=55.3 pTM=0.462 ipTM=0.398 tol=5.25 2024-07-11 06:18:32,912 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=55.4 pTM=0.475 ipTM=0.424 tol=4.63 2024-07-11 06:18:41,840 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=55.3 pTM=0.462 ipTM=0.41 tol=4.05 2024-07-11 06:18:50,765 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=55.6 pTM=0.479 ipTM=0.425 tol=5.01 2024-07-11 06:18:59,691 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=55.2 pTM=0.461 ipTM=0.451 tol=4.45 2024-07-11 06:19:08,616 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=55.6 pTM=0.472 ipTM=0.469 tol=5.57 2024-07-11 06:19:17,545 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=55.4 pTM=0.462 ipTM=0.483 tol=5.88 2024-07-11 06:19:26,464 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=55.5 pTM=0.476 ipTM=0.448 tol=2.84 2024-07-11 06:19:35,386 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=55.4 pTM=0.462 ipTM=0.44 tol=4.79 2024-07-11 06:19:44,298 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=55.5 pTM=0.479 ipTM=0.485 tol=2.9 2024-07-11 06:19:53,228 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=55.2 pTM=0.462 ipTM=0.435 tol=2.76 2024-07-11 06:20:02,154 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=55.4 pTM=0.466 ipTM=0.469 tol=6.97 2024-07-11 06:20:11,077 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=55.3 pTM=0.466 ipTM=0.454 tol=6.9 2024-07-11 06:20:19,995 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=55.3 pTM=0.471 ipTM=0.46 tol=2.84 2024-07-11 06:20:19,996 alphafold2_multimer_v3_model_3_seed_000 took 276.7s (30 recycles) 2024-07-11 06:20:29,129 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=54.8 pTM=0.471 ipTM=0.659 2024-07-11 06:20:38,004 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=56 pTM=0.467 ipTM=0.652 tol=10.7 2024-07-11 06:20:46,884 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=55.3 pTM=0.464 ipTM=0.689 tol=4.65 2024-07-11 06:20:55,761 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=55.1 pTM=0.469 ipTM=0.629 tol=3.8 2024-07-11 06:21:04,641 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=55.1 pTM=0.468 ipTM=0.54 tol=2.88 2024-07-11 06:21:13,519 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=54.8 pTM=0.469 ipTM=0.504 tol=3.5 2024-07-11 06:21:22,406 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=54.7 pTM=0.468 ipTM=0.423 tol=5.82 2024-07-11 06:21:31,287 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=54.8 pTM=0.466 ipTM=0.533 tol=6.82 2024-07-11 06:21:40,183 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=54.8 pTM=0.467 ipTM=0.415 tol=3.79 2024-07-11 06:21:49,071 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=54.8 pTM=0.466 ipTM=0.354 tol=5.14 2024-07-11 06:21:57,959 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=54.8 pTM=0.465 ipTM=0.283 tol=2.73 2024-07-11 06:22:06,842 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=54.6 pTM=0.467 ipTM=0.3 tol=2.88 2024-07-11 06:22:15,733 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=54.6 pTM=0.463 ipTM=0.293 tol=4.65 2024-07-11 06:22:24,615 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=54.7 pTM=0.468 ipTM=0.422 tol=4.92 2024-07-11 06:22:33,502 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=54.7 pTM=0.463 ipTM=0.335 tol=8.02 2024-07-11 06:22:42,380 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=54.7 pTM=0.462 ipTM=0.301 tol=8.38 2024-07-11 06:22:51,263 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=54.6 pTM=0.463 ipTM=0.242 tol=6 2024-07-11 06:23:00,140 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=55 pTM=0.463 ipTM=0.542 tol=6.88 2024-07-11 06:23:09,024 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=55.1 pTM=0.464 ipTM=0.435 tol=2.92 2024-07-11 06:23:17,902 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=54.9 pTM=0.466 ipTM=0.347 tol=3.52 2024-07-11 06:23:26,792 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=55 pTM=0.464 ipTM=0.413 tol=2.88 2024-07-11 06:23:35,674 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=55 pTM=0.465 ipTM=0.329 tol=3.26 2024-07-11 06:23:44,555 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=55.1 pTM=0.462 ipTM=0.521 tol=4.68 2024-07-11 06:23:53,436 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=54.8 pTM=0.467 ipTM=0.31 tol=4.57 2024-07-11 06:24:02,314 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=55 pTM=0.461 ipTM=0.363 tol=4.23 2024-07-11 06:24:11,187 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=54.8 pTM=0.467 ipTM=0.279 tol=5.22 2024-07-11 06:24:20,069 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=54.8 pTM=0.461 ipTM=0.362 tol=6.3 2024-07-11 06:24:28,940 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=55 pTM=0.466 ipTM=0.311 tol=7.65 2024-07-11 06:24:37,825 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=55.1 pTM=0.462 ipTM=0.385 tol=4.06 2024-07-11 06:24:46,716 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=55.1 pTM=0.466 ipTM=0.33 tol=2.74 2024-07-11 06:24:55,598 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=55.1 pTM=0.464 ipTM=0.535 tol=4.45 2024-07-11 06:24:55,599 alphafold2_multimer_v3_model_4_seed_000 took 275.3s (30 recycles) 2024-07-11 06:25:04,761 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=54.9 pTM=0.485 ipTM=0.305 2024-07-11 06:25:13,684 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=55.3 pTM=0.463 ipTM=0.425 tol=13 2024-07-11 06:25:22,612 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=55.2 pTM=0.459 ipTM=0.401 tol=7.04 2024-07-11 06:25:31,548 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=55.7 pTM=0.458 ipTM=0.532 tol=5.39 2024-07-11 06:25:40,491 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=55.8 pTM=0.457 ipTM=0.386 tol=5.69 2024-07-11 06:25:49,421 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=55.2 pTM=0.459 ipTM=0.385 tol=6.45 2024-07-11 06:25:58,350 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=55.3 pTM=0.457 ipTM=0.433 tol=6 2024-07-11 06:26:07,279 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=55.5 pTM=0.458 ipTM=0.505 tol=3.72 2024-07-11 06:26:16,213 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=55.6 pTM=0.456 ipTM=0.465 tol=5.49 2024-07-11 06:26:25,141 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=55.6 pTM=0.458 ipTM=0.494 tol=6.34 2024-07-11 06:26:34,071 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=55.5 pTM=0.458 ipTM=0.451 tol=5.12 2024-07-11 06:26:43,000 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=55.4 pTM=0.458 ipTM=0.46 tol=4.48 2024-07-11 06:26:51,925 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=55.4 pTM=0.458 ipTM=0.481 tol=6.66 2024-07-11 06:27:00,857 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=55.6 pTM=0.457 ipTM=0.476 tol=8.11 2024-07-11 06:27:09,789 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=55.4 pTM=0.46 ipTM=0.462 tol=3.86 2024-07-11 06:27:18,712 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=55.7 pTM=0.456 ipTM=0.466 tol=4.03 2024-07-11 06:27:27,640 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=55.4 pTM=0.461 ipTM=0.456 tol=4.07 2024-07-11 06:27:36,572 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=55.6 pTM=0.457 ipTM=0.501 tol=6.65 2024-07-11 06:27:45,510 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=55.6 pTM=0.46 ipTM=0.496 tol=6.38 2024-07-11 06:27:54,443 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=55.7 pTM=0.456 ipTM=0.52 tol=2.93 2024-07-11 06:28:03,385 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=55.6 pTM=0.46 ipTM=0.454 tol=4.24 2024-07-11 06:28:12,319 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=55.4 pTM=0.458 ipTM=0.509 tol=6.27 2024-07-11 06:28:21,266 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=55.6 pTM=0.46 ipTM=0.517 tol=6.41 2024-07-11 06:28:30,210 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=55.5 pTM=0.457 ipTM=0.471 tol=4.68 2024-07-11 06:28:39,153 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=55.5 pTM=0.46 ipTM=0.477 tol=4.96 2024-07-11 06:28:48,097 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=55.8 pTM=0.457 ipTM=0.492 tol=4.81 2024-07-11 06:28:57,028 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=55.3 pTM=0.459 ipTM=0.417 tol=5.99 2024-07-11 06:29:05,968 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=55.8 pTM=0.457 ipTM=0.478 tol=5.08 2024-07-11 06:29:14,902 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=55.4 pTM=0.458 ipTM=0.493 tol=4.83 2024-07-11 06:29:23,843 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=55.9 pTM=0.456 ipTM=0.515 tol=4.87 2024-07-11 06:29:32,776 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=55.7 pTM=0.458 ipTM=0.536 tol=5.23 2024-07-11 06:29:32,776 alphafold2_multimer_v3_model_5_seed_000 took 276.9s (30 recycles) 2024-07-11 06:29:33,053 reranking models by 'multimer' metric 2024-07-11 06:29:36,184 Warning: importing 'simtk.openmm' is deprecated. Import 'openmm' instead. 2024-07-11 06:30:16,985 Relaxation took 43.9s 2024-07-11 06:30:16,985 rank_001_alphafold2_multimer_v3_model_2_seed_000 pLDDT=56.2 pTM=0.472 ipTM=0.567 2024-07-11 06:30:59,931 Relaxation took 42.9s 2024-07-11 06:30:59,931 rank_002_alphafold2_multimer_v3_model_4_seed_000 pLDDT=55.1 pTM=0.464 ipTM=0.535 2024-07-11 06:31:34,159 Relaxation took 34.2s 2024-07-11 06:31:34,160 rank_003_alphafold2_multimer_v3_model_5_seed_000 pLDDT=55.7 pTM=0.458 ipTM=0.536 2024-07-11 06:32:13,138 Relaxation took 39.0s 2024-07-11 06:32:13,139 rank_004_alphafold2_multimer_v3_model_1_seed_000 pLDDT=54.9 pTM=0.453 ipTM=0.466 2024-07-11 06:32:52,699 Relaxation took 39.6s 2024-07-11 06:32:52,699 rank_005_alphafold2_multimer_v3_model_3_seed_000 pLDDT=55.3 pTM=0.471 ipTM=0.46 2024-07-11 06:32:53,960 Done