2024-07-11 06:15:08,759 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3)
2024-07-11 06:15:10,159 Running on GPU
2024-07-11 06:15:14,571 Found 6 citations for tools or databases
2024-07-11 06:15:14,572 Query 1/1: LYAG_HPF1L (length 1299)
2024-07-11 06:15:15,014 Sleeping for 7s. Reason: PENDING
2024-07-11 06:15:22,431 Sleeping for 6s. Reason: RUNNING
2024-07-11 06:15:28,845 Sleeping for 5s. Reason: RUNNING
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2024-07-11 06:15:48,114 Sleeping for 7s. Reason: RUNNING
2024-07-11 06:15:55,523 Sleeping for 10s. Reason: RUNNING
2024-07-11 06:16:05,942 Sleeping for 10s. Reason: RUNNING
2024-07-11 06:16:16,351 Sleeping for 10s. Reason: RUNNING
2024-07-11 06:16:26,763 Sleeping for 8s. Reason: RUNNING
2024-07-11 06:16:35,188 Sleeping for 8s. Reason: RUNNING
2024-07-11 06:16:43,588 Sleeping for 5s. Reason: RUNNING
2024-07-11 06:16:48,992 Sleeping for 10s. Reason: RUNNING
2024-07-11 06:16:59,422 Sleeping for 7s. Reason: RUNNING
2024-07-11 06:17:06,832 Sleeping for 7s. Reason: RUNNING
2024-07-11 06:17:14,258 Sleeping for 8s. Reason: RUNNING
2024-07-11 06:17:22,666 Sleeping for 5s. Reason: RUNNING
2024-07-11 06:17:28,080 Sleeping for 8s. Reason: RUNNING
2024-07-11 06:17:36,493 Sleeping for 5s. Reason: RUNNING
2024-07-11 06:17:41,945 Sleeping for 9s. Reason: RUNNING
2024-07-11 06:17:51,363 Sleeping for 10s. Reason: RUNNING
2024-07-11 06:18:03,976 Sleeping for 7s. Reason: PENDING
2024-07-11 06:18:11,398 Sleeping for 5s. Reason: RUNNING
2024-07-11 06:18:16,805 Sleeping for 7s. Reason: RUNNING
2024-07-11 06:18:24,213 Sleeping for 8s. Reason: RUNNING
2024-07-11 06:18:32,624 Sleeping for 8s. Reason: RUNNING
2024-07-11 06:18:41,045 Sleeping for 9s. Reason: RUNNING
2024-07-11 06:18:50,464 Sleeping for 8s. Reason: RUNNING
2024-07-11 06:18:58,870 Sleeping for 10s. Reason: RUNNING
2024-07-11 06:19:09,285 Sleeping for 6s. Reason: RUNNING
2024-07-11 06:19:15,695 Sleeping for 7s. Reason: RUNNING
2024-07-11 06:19:23,095 Sleeping for 7s. Reason: RUNNING
2024-07-11 06:19:30,497 Sleeping for 5s. Reason: RUNNING
2024-07-11 06:19:35,919 Sleeping for 6s. Reason: RUNNING
2024-07-11 06:19:42,399 Sleeping for 10s. Reason: RUNNING
2024-07-11 06:19:52,801 Sleeping for 9s. Reason: RUNNING
2024-07-11 06:20:08,839 Setting max_seq=508, max_extra_seq=2048
2024-07-11 06:24:57,669 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=83.4 pTM=0.708 ipTM=0.21
2024-07-11 06:25:44,516 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=84 pTM=0.715 ipTM=0.222 tol=6.86
2024-07-11 06:26:31,495 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=83.6 pTM=0.715 ipTM=0.221 tol=6.18
2024-07-11 06:27:18,503 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=83.8 pTM=0.716 ipTM=0.22 tol=3.17
2024-07-11 06:28:05,522 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=83.9 pTM=0.713 ipTM=0.21 tol=2.62
2024-07-11 06:28:52,512 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=84 pTM=0.717 ipTM=0.224 tol=2.63
2024-07-11 06:29:39,532 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=83.9 pTM=0.714 ipTM=0.218 tol=3.36
2024-07-11 06:30:26,580 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=84.1 pTM=0.718 ipTM=0.226 tol=2.6
2024-07-11 06:31:13,600 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=84.1 pTM=0.715 ipTM=0.216 tol=3.28
2024-07-11 06:32:00,588 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=84.4 pTM=0.721 ipTM=0.238 tol=5.2
2024-07-11 06:32:47,582 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=84.4 pTM=0.716 ipTM=0.219 tol=2.5
2024-07-11 06:33:34,587 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=84.2 pTM=0.718 ipTM=0.225 tol=2.57
2024-07-11 06:34:21,588 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=84.1 pTM=0.714 ipTM=0.214 tol=2.45
2024-07-11 06:35:08,598 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=84 pTM=0.717 ipTM=0.223 tol=1.97
2024-07-11 06:35:55,618 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=84.1 pTM=0.713 ipTM=0.214 tol=2.22
2024-07-11 06:36:42,641 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=84.1 pTM=0.717 ipTM=0.225 tol=1.97
2024-07-11 06:37:29,672 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=84 pTM=0.714 ipTM=0.218 tol=3.78
2024-07-11 06:38:16,705 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=83.9 pTM=0.718 ipTM=0.223 tol=2.72
2024-07-11 06:39:03,722 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=84.1 pTM=0.714 ipTM=0.213 tol=2.36
2024-07-11 06:39:50,694 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=84.2 pTM=0.721 ipTM=0.24 tol=5.89
2024-07-11 06:40:37,681 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=84.7 pTM=0.718 ipTM=0.224 tol=2.22
2024-07-11 06:41:24,671 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=84.1 pTM=0.719 ipTM=0.227 tol=1.61
2024-07-11 06:42:11,655 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=84.1 pTM=0.716 ipTM=0.219 tol=2.53
2024-07-11 06:42:58,665 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=84 pTM=0.717 ipTM=0.22 tol=1.84
2024-07-11 06:43:45,664 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=83.9 pTM=0.715 ipTM=0.217 tol=2.21
2024-07-11 06:44:32,678 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=83.9 pTM=0.717 ipTM=0.223 tol=1.58
2024-07-11 06:45:19,671 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=83.9 pTM=0.714 ipTM=0.218 tol=3.42
2024-07-11 06:46:06,686 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=83.9 pTM=0.719 ipTM=0.23 tol=2.5
2024-07-11 06:46:53,699 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=83.9 pTM=0.714 ipTM=0.219 tol=3.19
2024-07-11 06:47:40,706 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=83.7 pTM=0.716 ipTM=0.22 tol=5.1
2024-07-11 06:48:27,721 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=84 pTM=0.713 ipTM=0.211 tol=1.84
2024-07-11 06:48:27,722 alphafold2_multimer_v3_model_1_seed_000 took 1678.1s (30 recycles)
2024-07-11 06:49:16,081 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=83.6 pTM=0.713 ipTM=0.237
2024-07-11 06:50:03,131 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=83.9 pTM=0.716 ipTM=0.244 tol=4.9
2024-07-11 06:50:50,148 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=83.4 pTM=0.722 ipTM=0.253 tol=8.93
2024-07-11 06:51:37,168 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=84 pTM=0.718 ipTM=0.25 tol=5.12
2024-07-11 06:52:24,171 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=84.3 pTM=0.72 ipTM=0.252 tol=5.35
2024-07-11 06:53:11,164 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=84.3 pTM=0.724 ipTM=0.264 tol=2.1
2024-07-11 06:53:58,176 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=84.1 pTM=0.72 ipTM=0.252 tol=3.75
2024-07-11 06:54:45,176 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=84.4 pTM=0.724 ipTM=0.259 tol=1.76
2024-07-11 06:55:32,166 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=84.4 pTM=0.724 ipTM=0.263 tol=0.978
2024-07-11 06:56:19,148 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=84.3 pTM=0.723 ipTM=0.262 tol=6.89
2024-07-11 06:57:06,119 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=84.4 pTM=0.728 ipTM=0.272 tol=2.11
2024-07-11 06:57:53,123 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=84.3 pTM=0.723 ipTM=0.259 tol=3.8
2024-07-11 06:58:40,090 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=84.2 pTM=0.725 ipTM=0.265 tol=1.37
2024-07-11 06:59:27,064 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=84.3 pTM=0.725 ipTM=0.264 tol=0.754
2024-07-11 07:00:14,021 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=84.4 pTM=0.726 ipTM=0.264 tol=1.04
2024-07-11 07:01:01,022 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=84.3 pTM=0.724 ipTM=0.261 tol=0.713
2024-07-11 07:01:47,997 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=84.3 pTM=0.724 ipTM=0.261 tol=1.23
2024-07-11 07:02:34,992 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=84.3 pTM=0.723 ipTM=0.258 tol=1.77
2024-07-11 07:03:21,971 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=84.3 pTM=0.723 ipTM=0.26 tol=2.11
2024-07-11 07:04:08,943 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=84.4 pTM=0.727 ipTM=0.269 tol=2.81
2024-07-11 07:04:55,900 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=84.4 pTM=0.729 ipTM=0.278 tol=1.5
2024-07-11 07:05:42,882 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=84.4 pTM=0.728 ipTM=0.273 tol=0.851
2024-07-11 07:06:29,821 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=84.3 pTM=0.727 ipTM=0.271 tol=1.03
2024-07-11 07:07:16,781 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=84.4 pTM=0.726 ipTM=0.268 tol=7.64
2024-07-11 07:08:03,714 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=84.4 pTM=0.729 ipTM=0.274 tol=2.67
2024-07-11 07:08:50,664 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=84.4 pTM=0.725 ipTM=0.266 tol=3.68
2024-07-11 07:09:37,615 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=84.4 pTM=0.726 ipTM=0.266 tol=1.56
2024-07-11 07:10:24,588 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=84.4 pTM=0.726 ipTM=0.267 tol=1.76
2024-07-11 07:11:11,546 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=84.4 pTM=0.726 ipTM=0.271 tol=1.57
2024-07-11 07:11:58,500 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=84.4 pTM=0.727 ipTM=0.27 tol=1.49
2024-07-11 07:12:45,450 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=84.5 pTM=0.727 ipTM=0.271 tol=1.52
2024-07-11 07:12:45,451 alphafold2_multimer_v3_model_2_seed_000 took 1456.3s (30 recycles)
2024-07-11 07:13:33,938 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=83.8 pTM=0.727 ipTM=0.295
2024-07-11 07:14:21,063 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=84.3 pTM=0.72 ipTM=0.248 tol=9.3
2024-07-11 07:15:08,149 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=83.6 pTM=0.721 ipTM=0.259 tol=9.53
2024-07-11 07:15:55,244 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=83.9 pTM=0.719 ipTM=0.248 tol=3.39
2024-07-11 07:16:42,310 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=84.1 pTM=0.723 ipTM=0.258 tol=2.31
2024-07-11 07:17:29,406 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=84.1 pTM=0.721 ipTM=0.254 tol=2.22
2024-07-11 07:18:16,485 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=83.8 pTM=0.722 ipTM=0.252 tol=3.19
2024-07-11 07:19:03,567 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=84.1 pTM=0.723 ipTM=0.258 tol=1.23
2024-07-11 07:19:50,672 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=83.9 pTM=0.721 ipTM=0.25 tol=2.07
2024-07-11 07:20:37,753 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=84.1 pTM=0.722 ipTM=0.253 tol=2.23
2024-07-11 07:21:24,839 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=83.7 pTM=0.723 ipTM=0.257 tol=8.59
2024-07-11 07:22:11,900 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=84.4 pTM=0.725 ipTM=0.263 tol=4.44
2024-07-11 07:22:58,980 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=84 pTM=0.722 ipTM=0.25 tol=1.96
2024-07-11 07:23:46,040 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=83.9 pTM=0.722 ipTM=0.252 tol=4.17
2024-07-11 07:24:33,092 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=83.8 pTM=0.722 ipTM=0.257 tol=1.44
2024-07-11 07:25:20,182 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=84 pTM=0.722 ipTM=0.259 tol=1.21
2024-07-11 07:26:07,269 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=83.8 pTM=0.722 ipTM=0.255 tol=1.77
2024-07-11 07:26:54,353 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=83.8 pTM=0.722 ipTM=0.258 tol=1.03
2024-07-11 07:27:41,448 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=83.6 pTM=0.721 ipTM=0.253 tol=1.84
2024-07-11 07:28:28,504 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=83.8 pTM=0.721 ipTM=0.253 tol=1.93
2024-07-11 07:29:15,610 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=83.2 pTM=0.722 ipTM=0.251 tol=6.91
2024-07-11 07:30:02,721 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=84.2 pTM=0.725 ipTM=0.261 tol=3.37
2024-07-11 07:30:49,799 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=83.7 pTM=0.722 ipTM=0.25 tol=2.07
2024-07-11 07:31:36,831 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=84 pTM=0.724 ipTM=0.26 tol=2.61
2024-07-11 07:32:23,897 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=83.6 pTM=0.722 ipTM=0.249 tol=1.75
2024-07-11 07:33:10,961 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=83.7 pTM=0.722 ipTM=0.254 tol=1.75
2024-07-11 07:33:58,033 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=83.6 pTM=0.723 ipTM=0.254 tol=1.66
2024-07-11 07:34:45,099 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=83.6 pTM=0.722 ipTM=0.254 tol=1.42
2024-07-11 07:35:32,207 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=83.5 pTM=0.722 ipTM=0.258 tol=2.86
2024-07-11 07:36:19,287 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=83.6 pTM=0.721 ipTM=0.253 tol=2.29
2024-07-11 07:37:06,361 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=83.2 pTM=0.722 ipTM=0.252 tol=8.3
2024-07-11 07:37:06,362 alphafold2_multimer_v3_model_3_seed_000 took 1459.5s (30 recycles)
2024-07-11 07:37:54,817 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=82.9 pTM=0.715 ipTM=0.243
2024-07-11 07:38:41,954 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=83.6 pTM=0.722 ipTM=0.258 tol=5
2024-07-11 07:39:29,068 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=83.8 pTM=0.723 ipTM=0.262 tol=4.36
2024-07-11 07:40:16,138 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=84.3 pTM=0.733 ipTM=0.295 tol=2.14
2024-07-11 07:41:03,257 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=83.9 pTM=0.722 ipTM=0.257 tol=2.11
2024-07-11 07:41:50,354 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=83.8 pTM=0.725 ipTM=0.272 tol=1.81
2024-07-11 07:42:37,463 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=83.8 pTM=0.723 ipTM=0.262 tol=2.19
2024-07-11 07:43:24,564 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=84.6 pTM=0.738 ipTM=0.31 tol=2.54
2024-07-11 07:44:11,663 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=84.2 pTM=0.727 ipTM=0.275 tol=2.24
2024-07-11 07:44:58,774 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=84 pTM=0.727 ipTM=0.274 tol=2.42
2024-07-11 07:45:45,889 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=83.9 pTM=0.725 ipTM=0.27 tol=2.58
2024-07-11 07:46:32,963 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=84.1 pTM=0.732 ipTM=0.296 tol=2.44
2024-07-11 07:47:20,061 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=83.9 pTM=0.724 ipTM=0.267 tol=2.43
2024-07-11 07:48:07,130 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=84.1 pTM=0.729 ipTM=0.284 tol=2.1
2024-07-11 07:48:54,206 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=84.2 pTM=0.73 ipTM=0.289 tol=2.09
2024-07-11 07:49:41,316 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=84.2 pTM=0.729 ipTM=0.285 tol=1.92
2024-07-11 07:50:28,413 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=83.9 pTM=0.728 ipTM=0.28 tol=1.77
2024-07-11 07:51:15,517 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=84.2 pTM=0.732 ipTM=0.295 tol=1.81
2024-07-11 07:52:02,628 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=83.8 pTM=0.726 ipTM=0.272 tol=2.15
2024-07-11 07:52:49,705 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=84.2 pTM=0.736 ipTM=0.308 tol=2
2024-07-11 07:53:36,807 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=84 pTM=0.73 ipTM=0.287 tol=1.52
2024-07-11 07:54:23,914 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=84.1 pTM=0.731 ipTM=0.29 tol=1.55
2024-07-11 07:55:11,010 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=83.5 pTM=0.725 ipTM=0.272 tol=2.28
2024-07-11 07:55:58,095 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=84.6 pTM=0.741 ipTM=0.32 tol=2.38
2024-07-11 07:56:45,210 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=83.9 pTM=0.724 ipTM=0.269 tol=1.83
2024-07-11 07:57:32,298 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=83.9 pTM=0.729 ipTM=0.286 tol=1.23
2024-07-11 07:58:19,410 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=83.6 pTM=0.723 ipTM=0.264 tol=2.01
2024-07-11 07:59:06,489 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=84.1 pTM=0.736 ipTM=0.306 tol=2.18
2024-07-11 07:59:53,611 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=83.9 pTM=0.724 ipTM=0.269 tol=1.49
2024-07-11 08:00:40,703 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=83.9 pTM=0.731 ipTM=0.293 tol=1.27
2024-07-11 08:01:27,787 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=84 pTM=0.728 ipTM=0.282 tol=1.43
2024-07-11 08:01:27,788 alphafold2_multimer_v3_model_4_seed_000 took 1460.0s (30 recycles)
2024-07-11 08:02:16,227 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=83.1 pTM=0.722 ipTM=0.265
2024-07-11 08:03:03,368 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=83.8 pTM=0.721 ipTM=0.249 tol=6.07
2024-07-11 08:03:50,454 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=83.8 pTM=0.728 ipTM=0.277 tol=5.29
2024-07-11 08:04:37,513 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=84.4 pTM=0.755 ipTM=0.377 tol=3.88
2024-07-11 08:05:24,566 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=84.4 pTM=0.753 ipTM=0.371 tol=2.34
2024-07-11 08:06:11,595 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=84.5 pTM=0.767 ipTM=0.418 tol=1.86
2024-07-11 08:06:58,630 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=84.6 pTM=0.767 ipTM=0.418 tol=1.83
2024-07-11 08:07:45,691 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=84.9 pTM=0.77 ipTM=0.423 tol=1.65
2024-07-11 08:08:32,747 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=84.9 pTM=0.777 ipTM=0.453 tol=1.17
2024-07-11 08:09:19,779 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=84.9 pTM=0.771 ipTM=0.433 tol=1.1
2024-07-11 08:10:06,841 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=84.8 pTM=0.779 ipTM=0.461 tol=3.2
2024-07-11 08:10:53,873 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=84.7 pTM=0.77 ipTM=0.429 tol=2.62
2024-07-11 08:11:40,914 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=84.9 pTM=0.777 ipTM=0.461 tol=1.76
2024-07-11 08:12:27,939 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=84.8 pTM=0.769 ipTM=0.424 tol=1.35
2024-07-11 08:13:14,985 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=85 pTM=0.783 ipTM=0.477 tol=1.42
2024-07-11 08:14:02,033 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=84.9 pTM=0.777 ipTM=0.456 tol=1.18
2024-07-11 08:14:49,072 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=84.9 pTM=0.783 ipTM=0.479 tol=1.14
2024-07-11 08:15:36,102 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=84.8 pTM=0.776 ipTM=0.451 tol=1.03
2024-07-11 08:16:23,143 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=84.8 pTM=0.772 ipTM=0.44 tol=1.11
2024-07-11 08:17:10,164 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=84.6 pTM=0.768 ipTM=0.42 tol=1.24
2024-07-11 08:17:57,189 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=84.9 pTM=0.782 ipTM=0.475 tol=1.26
2024-07-11 08:18:44,243 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=84.7 pTM=0.767 ipTM=0.417 tol=1.21
2024-07-11 08:19:31,286 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=84.8 pTM=0.775 ipTM=0.453 tol=1.7
2024-07-11 08:20:18,338 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=84.6 pTM=0.766 ipTM=0.415 tol=1.56
2024-07-11 08:21:05,390 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=84.9 pTM=0.779 ipTM=0.464 tol=2.13
2024-07-11 08:21:52,436 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=84.7 pTM=0.769 ipTM=0.425 tol=2.17
2024-07-11 08:22:39,488 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=84.6 pTM=0.768 ipTM=0.424 tol=1.19
2024-07-11 08:23:26,517 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=84.4 pTM=0.763 ipTM=0.403 tol=2.2
2024-07-11 08:24:13,551 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=84.8 pTM=0.775 ipTM=0.449 tol=1.81
2024-07-11 08:25:00,585 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=84.4 pTM=0.759 ipTM=0.391 tol=1.37
2024-07-11 08:25:47,616 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=84.6 pTM=0.773 ipTM=0.448 tol=1.5
2024-07-11 08:25:47,617 alphafold2_multimer_v3_model_5_seed_000 took 1458.4s (30 recycles)
2024-07-11 08:25:49,058 reranking models by 'multimer' metric
2024-07-11 08:25:53,916 Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
2024-07-11 08:28:07,766 Relaxation took 138.7s
2024-07-11 08:28:07,766 rank_001_alphafold2_multimer_v3_model_5_seed_000 pLDDT=84.6 pTM=0.773 ipTM=0.448
2024-07-11 08:30:20,473 Relaxation took 132.7s
2024-07-11 08:30:20,473 rank_002_alphafold2_multimer_v3_model_4_seed_000 pLDDT=84 pTM=0.728 ipTM=0.282
2024-07-11 08:33:58,450 Relaxation took 218.0s
2024-07-11 08:33:58,450 rank_003_alphafold2_multimer_v3_model_2_seed_000 pLDDT=84.5 pTM=0.727 ipTM=0.271
2024-07-11 08:38:18,729 Relaxation took 260.3s
2024-07-11 08:38:18,729 rank_004_alphafold2_multimer_v3_model_3_seed_000 pLDDT=83.2 pTM=0.722 ipTM=0.252
2024-07-11 08:40:38,847 Relaxation took 140.1s
2024-07-11 08:40:38,847 rank_005_alphafold2_multimer_v3_model_1_seed_000 pLDDT=84 pTM=0.713 ipTM=0.211
2024-07-11 08:40:42,098 Done