2024-07-11 06:33:29,072 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3)
2024-07-11 06:33:29,400 Running on GPU
2024-07-11 06:33:32,972 Found 6 citations for tools or databases
2024-07-11 06:33:32,972 Query 1/1: M3K9_PSN1 (length 1571)
2024-07-11 06:33:33,428 Sleeping for 8s. Reason: PENDING
2024-07-11 06:33:41,840 Sleeping for 5s. Reason: RUNNING
2024-07-11 06:33:47,240 Sleeping for 8s. Reason: RUNNING
2024-07-11 06:33:55,657 Sleeping for 8s. Reason: RUNNING
2024-07-11 06:34:04,047 Sleeping for 6s. Reason: RUNNING
2024-07-11 06:34:10,452 Sleeping for 5s. Reason: RUNNING
2024-07-11 06:34:15,861 Sleeping for 10s. Reason: RUNNING
2024-07-11 06:34:26,263 Sleeping for 8s. Reason: RUNNING
2024-07-11 06:34:34,667 Sleeping for 8s. Reason: RUNNING
2024-07-11 06:34:43,075 Sleeping for 7s. Reason: RUNNING
2024-07-11 06:34:50,469 Sleeping for 9s. Reason: RUNNING
2024-07-11 06:34:59,891 Sleeping for 6s. Reason: RUNNING
2024-07-11 06:35:06,281 Sleeping for 5s. Reason: RUNNING
2024-07-11 06:35:11,681 Sleeping for 6s. Reason: RUNNING
2024-07-11 06:35:18,100 Sleeping for 5s. Reason: RUNNING
2024-07-11 06:35:23,491 Sleeping for 7s. Reason: RUNNING
2024-07-11 06:35:30,886 Sleeping for 10s. Reason: RUNNING
2024-07-11 06:35:41,300 Sleeping for 8s. Reason: RUNNING
2024-07-11 06:35:49,740 Sleeping for 9s. Reason: RUNNING
2024-07-11 06:35:59,152 Sleeping for 7s. Reason: RUNNING
2024-07-11 06:36:06,572 Sleeping for 8s. Reason: RUNNING
2024-07-11 06:36:14,978 Sleeping for 7s. Reason: RUNNING
2024-07-11 06:36:22,399 Sleeping for 10s. Reason: RUNNING
2024-07-11 06:36:32,802 Sleeping for 5s. Reason: RUNNING
2024-07-11 06:36:38,203 Sleeping for 9s. Reason: RUNNING
2024-07-11 06:36:47,620 Sleeping for 8s. Reason: RUNNING
2024-07-11 06:36:56,031 Sleeping for 8s. Reason: RUNNING
2024-07-11 06:37:04,426 Sleeping for 10s. Reason: RUNNING
2024-07-11 06:37:14,835 Sleeping for 6s. Reason: RUNNING
2024-07-11 06:37:21,240 Sleeping for 8s. Reason: RUNNING
2024-07-11 06:37:31,581 Sleeping for 9s. Reason: PENDING
2024-07-11 06:37:40,976 Sleeping for 6s. Reason: RUNNING
2024-07-11 06:37:47,398 Sleeping for 7s. Reason: RUNNING
2024-07-11 06:37:54,817 Sleeping for 10s. Reason: RUNNING
2024-07-11 06:38:05,228 Sleeping for 6s. Reason: RUNNING
2024-07-11 06:38:11,646 Sleeping for 7s. Reason: RUNNING
2024-07-11 06:38:19,052 Sleeping for 8s. Reason: RUNNING
2024-07-11 06:38:27,457 Sleeping for 9s. Reason: RUNNING
2024-07-11 06:38:36,876 Sleeping for 6s. Reason: RUNNING
2024-07-11 06:38:43,290 Sleeping for 7s. Reason: RUNNING
2024-07-11 06:38:50,705 Sleeping for 9s. Reason: RUNNING
2024-07-11 06:39:00,122 Sleeping for 10s. Reason: RUNNING
2024-07-11 06:39:10,531 Sleeping for 8s. Reason: RUNNING
2024-07-11 06:39:18,940 Sleeping for 6s. Reason: RUNNING
2024-07-11 06:39:25,362 Sleeping for 5s. Reason: RUNNING
2024-07-11 06:39:30,773 Sleeping for 7s. Reason: RUNNING
2024-07-11 06:39:38,208 Sleeping for 9s. Reason: RUNNING
2024-07-11 06:39:47,620 Sleeping for 9s. Reason: RUNNING
2024-07-11 06:39:57,027 Sleeping for 5s. Reason: RUNNING
2024-07-11 06:40:02,438 Sleeping for 8s. Reason: RUNNING
2024-07-11 06:40:10,851 Sleeping for 7s. Reason: RUNNING
2024-07-11 06:40:18,267 Sleeping for 5s. Reason: RUNNING
2024-07-11 06:40:23,665 Sleeping for 9s. Reason: RUNNING
2024-07-11 06:40:33,071 Sleeping for 10s. Reason: RUNNING
2024-07-11 06:40:49,106 Setting max_seq=508, max_extra_seq=2048
2024-07-11 06:44:49,831 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=45.6 pTM=0.325 ipTM=0.232
2024-07-11 06:46:04,685 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=45.6 pTM=0.325 ipTM=0.231 tol=16
2024-07-11 06:47:19,574 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=45.4 pTM=0.325 ipTM=0.241 tol=11.8
2024-07-11 06:48:34,582 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=45.3 pTM=0.329 ipTM=0.26 tol=5.96
2024-07-11 06:49:49,589 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=45.7 pTM=0.331 ipTM=0.259 tol=4.51
2024-07-11 06:51:04,590 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=45.8 pTM=0.331 ipTM=0.265 tol=5.91
2024-07-11 06:52:19,525 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=45.9 pTM=0.329 ipTM=0.26 tol=5.5
2024-07-11 06:53:34,491 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=46 pTM=0.33 ipTM=0.265 tol=7.17
2024-07-11 06:54:49,544 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=46.2 pTM=0.329 ipTM=0.259 tol=5.32
2024-07-11 06:56:04,584 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=46.4 pTM=0.329 ipTM=0.266 tol=4.71
2024-07-11 06:57:19,571 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=46.3 pTM=0.328 ipTM=0.26 tol=7.29
2024-07-11 06:58:34,561 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=46.4 pTM=0.328 ipTM=0.269 tol=9.27
2024-07-11 06:59:49,617 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=46.6 pTM=0.331 ipTM=0.26 tol=3.94
2024-07-11 07:01:04,646 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=46.6 pTM=0.328 ipTM=0.261 tol=11.7
2024-07-11 07:02:19,686 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=46.6 pTM=0.328 ipTM=0.251 tol=11
2024-07-11 07:03:34,790 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=46.2 pTM=0.329 ipTM=0.259 tol=6.38
2024-07-11 07:04:49,853 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=46.3 pTM=0.332 ipTM=0.261 tol=11.7
2024-07-11 07:06:04,880 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=46.6 pTM=0.331 ipTM=0.26 tol=11.3
2024-07-11 07:07:20,011 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=46.8 pTM=0.33 ipTM=0.259 tol=4.44
2024-07-11 07:08:35,089 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=46.5 pTM=0.333 ipTM=0.258 tol=2.86
2024-07-11 07:09:50,060 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=46.6 pTM=0.334 ipTM=0.262 tol=11.9
2024-07-11 07:11:05,125 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=46.6 pTM=0.331 ipTM=0.264 tol=11.4
2024-07-11 07:12:20,238 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=46.4 pTM=0.33 ipTM=0.255 tol=4.27
2024-07-11 07:13:35,326 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=46.7 pTM=0.333 ipTM=0.257 tol=6.46
2024-07-11 07:14:50,297 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=46.8 pTM=0.333 ipTM=0.262 tol=4.79
2024-07-11 07:16:05,285 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=46.5 pTM=0.331 ipTM=0.26 tol=3.94
2024-07-11 07:17:20,266 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=46.2 pTM=0.329 ipTM=0.257 tol=4.57
2024-07-11 07:18:35,258 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=46.4 pTM=0.331 ipTM=0.267 tol=3.96
2024-07-11 07:19:50,245 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=46.6 pTM=0.33 ipTM=0.264 tol=3.31
2024-07-11 07:21:05,296 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=46.7 pTM=0.331 ipTM=0.266 tol=7.18
2024-07-11 07:22:20,359 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=46.6 pTM=0.328 ipTM=0.261 tol=4.51
2024-07-11 07:22:20,360 alphafold2_multimer_v3_model_1_seed_000 took 2486.3s (30 recycles)
2024-07-11 07:23:36,732 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=43.5 pTM=0.328 ipTM=0.187
2024-07-11 07:24:51,815 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=44.8 pTM=0.328 ipTM=0.184 tol=16.8
2024-07-11 07:26:06,942 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=46.1 pTM=0.343 ipTM=0.209 tol=16.7
2024-07-11 07:27:22,024 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=46 pTM=0.339 ipTM=0.211 tol=11.6
2024-07-11 07:28:37,057 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=46.2 pTM=0.356 ipTM=0.275 tol=10.1
2024-07-11 07:29:52,034 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=46.8 pTM=0.359 ipTM=0.282 tol=7.55
2024-07-11 07:31:06,995 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=46.6 pTM=0.36 ipTM=0.285 tol=5.05
2024-07-11 07:32:21,945 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=46.9 pTM=0.353 ipTM=0.266 tol=6.51
2024-07-11 07:33:36,905 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=46.9 pTM=0.36 ipTM=0.288 tol=6.82
2024-07-11 07:34:51,923 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=47.2 pTM=0.365 ipTM=0.305 tol=6.61
2024-07-11 07:36:06,872 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=47.2 pTM=0.374 ipTM=0.338 tol=3.53
2024-07-11 07:37:21,814 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=47.3 pTM=0.369 ipTM=0.316 tol=2.82
2024-07-11 07:38:36,764 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=47.2 pTM=0.368 ipTM=0.312 tol=2.46
2024-07-11 07:39:51,737 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=47.3 pTM=0.371 ipTM=0.321 tol=2.28
2024-07-11 07:41:06,689 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=47.3 pTM=0.372 ipTM=0.323 tol=2.52
2024-07-11 07:42:21,633 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=47.3 pTM=0.367 ipTM=0.304 tol=2.59
2024-07-11 07:43:36,575 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=47.5 pTM=0.378 ipTM=0.342 tol=4.6
2024-07-11 07:44:51,555 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=47.6 pTM=0.373 ipTM=0.323 tol=3.81
2024-07-11 07:46:06,502 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=47.8 pTM=0.383 ipTM=0.353 tol=4.23
2024-07-11 07:47:21,422 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=47.5 pTM=0.375 ipTM=0.326 tol=1.71
2024-07-11 07:48:36,340 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=47.4 pTM=0.371 ipTM=0.318 tol=1.91
2024-07-11 07:49:51,263 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=47.5 pTM=0.373 ipTM=0.327 tol=2.65
2024-07-11 07:51:06,234 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=47.2 pTM=0.366 ipTM=0.303 tol=2.98
2024-07-11 07:52:21,288 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=47.3 pTM=0.359 ipTM=0.28 tol=1.56
2024-07-11 07:53:36,272 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=47.1 pTM=0.357 ipTM=0.275 tol=1.98
2024-07-11 07:54:51,227 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=47.2 pTM=0.358 ipTM=0.28 tol=2.39
2024-07-11 07:56:06,155 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=47.3 pTM=0.367 ipTM=0.308 tol=5.7
2024-07-11 07:57:21,150 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=47.3 pTM=0.374 ipTM=0.332 tol=5.22
2024-07-11 07:58:36,199 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=47.5 pTM=0.375 ipTM=0.331 tol=2.53
2024-07-11 07:59:51,188 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=47.7 pTM=0.385 ipTM=0.365 tol=2.16
2024-07-11 08:01:06,198 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=47.4 pTM=0.375 ipTM=0.333 tol=2.87
2024-07-11 08:01:06,199 alphafold2_multimer_v3_model_2_seed_000 took 2324.4s (30 recycles)
2024-07-11 08:02:22,895 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=45.2 pTM=0.333 ipTM=0.212
2024-07-11 08:03:38,236 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=44.2 pTM=0.333 ipTM=0.225 tol=20.8
2024-07-11 08:04:53,590 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=44.7 pTM=0.325 ipTM=0.213 tol=13.6
2024-07-11 08:06:08,946 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=44.9 pTM=0.325 ipTM=0.213 tol=14.6
2024-07-11 08:07:24,256 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=44.8 pTM=0.326 ipTM=0.225 tol=13.5
2024-07-11 08:08:39,667 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=45.1 pTM=0.327 ipTM=0.226 tol=10.4
2024-07-11 08:09:54,977 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=44.9 pTM=0.328 ipTM=0.229 tol=7.43
2024-07-11 08:11:10,284 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=45 pTM=0.327 ipTM=0.23 tol=5.43
2024-07-11 08:12:25,566 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=45.3 pTM=0.331 ipTM=0.23 tol=5.63
2024-07-11 08:13:40,882 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=45.4 pTM=0.329 ipTM=0.232 tol=5.72
2024-07-11 08:14:56,179 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=45.3 pTM=0.33 ipTM=0.231 tol=11
2024-07-11 08:16:11,446 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=45.4 pTM=0.33 ipTM=0.232 tol=6.94
2024-07-11 08:17:26,799 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=45.2 pTM=0.332 ipTM=0.23 tol=7.75
2024-07-11 08:18:42,147 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=45.2 pTM=0.331 ipTM=0.231 tol=8.4
2024-07-11 08:19:57,501 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=45.4 pTM=0.334 ipTM=0.23 tol=7.49
2024-07-11 08:21:12,847 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=45.1 pTM=0.331 ipTM=0.23 tol=5.63
2024-07-11 08:22:28,185 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=45.7 pTM=0.338 ipTM=0.235 tol=9.99
2024-07-11 08:23:43,559 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=45.6 pTM=0.335 ipTM=0.231 tol=8.47
2024-07-11 08:24:58,917 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=45.3 pTM=0.333 ipTM=0.231 tol=8.93
2024-07-11 08:26:14,219 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=45.5 pTM=0.335 ipTM=0.231 tol=6.51
2024-07-11 08:27:29,468 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=45.4 pTM=0.337 ipTM=0.237 tol=6.38
2024-07-11 08:28:44,821 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=45.3 pTM=0.332 ipTM=0.232 tol=6.46
2024-07-11 08:30:00,184 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=45.4 pTM=0.333 ipTM=0.229 tol=4.12
2024-07-11 08:31:15,542 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=45.2 pTM=0.332 ipTM=0.23 tol=7.83
2024-07-11 08:32:30,893 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=45.4 pTM=0.333 ipTM=0.232 tol=8.24
2024-07-11 08:33:46,246 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=45 pTM=0.33 ipTM=0.232 tol=6.4
2024-07-11 08:35:01,608 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=45.2 pTM=0.333 ipTM=0.229 tol=4.36
2024-07-11 08:36:16,949 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=45.2 pTM=0.334 ipTM=0.231 tol=6.57
2024-07-11 08:37:32,322 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=45.1 pTM=0.33 ipTM=0.233 tol=8.25
2024-07-11 08:38:47,645 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=45.4 pTM=0.333 ipTM=0.233 tol=4.3
2024-07-11 08:40:02,995 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=45.3 pTM=0.333 ipTM=0.232 tol=5.96
2024-07-11 08:40:02,996 alphafold2_multimer_v3_model_3_seed_000 took 2335.3s (30 recycles)
2024-07-11 08:41:19,764 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=42.8 pTM=0.334 ipTM=0.215
2024-07-11 08:42:34,963 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=43 pTM=0.331 ipTM=0.259 tol=20
2024-07-11 08:43:50,270 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=43.2 pTM=0.338 ipTM=0.237 tol=15.9
2024-07-11 08:45:05,622 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=43.2 pTM=0.333 ipTM=0.247 tol=9.75
2024-07-11 08:46:20,965 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=43.3 pTM=0.331 ipTM=0.244 tol=13.9
2024-07-11 08:47:36,233 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=44 pTM=0.344 ipTM=0.251 tol=11.7
2024-07-11 08:48:51,449 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=43.5 pTM=0.342 ipTM=0.256 tol=10.3
2024-07-11 08:50:06,702 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=43.7 pTM=0.338 ipTM=0.25 tol=9.57
2024-07-11 08:51:22,035 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=43.9 pTM=0.341 ipTM=0.251 tol=7.11
2024-07-11 08:52:37,366 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=44.2 pTM=0.345 ipTM=0.26 tol=5.17
2024-07-11 08:53:52,615 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=44 pTM=0.346 ipTM=0.267 tol=9.2
2024-07-11 08:55:07,930 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=43.8 pTM=0.34 ipTM=0.246 tol=7.6
2024-07-11 08:56:23,212 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=44.1 pTM=0.35 ipTM=0.266 tol=4.88
2024-07-11 08:57:38,495 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=44.4 pTM=0.354 ipTM=0.283 tol=6.54
2024-07-11 08:58:53,823 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=44.3 pTM=0.354 ipTM=0.283 tol=5.61
2024-07-11 09:00:09,142 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=43.9 pTM=0.343 ipTM=0.25 tol=4.75
2024-07-11 09:01:24,430 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=43.9 pTM=0.349 ipTM=0.272 tol=5.46
2024-07-11 09:02:39,642 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=43.9 pTM=0.346 ipTM=0.26 tol=10
2024-07-11 09:03:54,879 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=43.9 pTM=0.346 ipTM=0.253 tol=9.78
2024-07-11 09:05:10,135 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=43.8 pTM=0.344 ipTM=0.251 tol=4.88
2024-07-11 09:06:25,419 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=43.8 pTM=0.346 ipTM=0.257 tol=8.33
2024-07-11 09:07:40,740 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=43.5 pTM=0.338 ipTM=0.245 tol=4.22
2024-07-11 09:08:56,060 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=43.4 pTM=0.344 ipTM=0.249 tol=9.9
2024-07-11 09:10:11,386 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=43.9 pTM=0.346 ipTM=0.254 tol=5.85
2024-07-11 09:11:26,737 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=43.6 pTM=0.34 ipTM=0.245 tol=9.15
2024-07-11 09:12:42,101 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=43.7 pTM=0.339 ipTM=0.242 tol=9.22
2024-07-11 09:13:57,445 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=44 pTM=0.352 ipTM=0.263 tol=9.04
2024-07-11 09:15:12,779 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=43.6 pTM=0.343 ipTM=0.245 tol=4.5
2024-07-11 09:16:28,010 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=43.8 pTM=0.344 ipTM=0.246 tol=8.88
2024-07-11 09:17:43,391 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=43.7 pTM=0.341 ipTM=0.246 tol=4.71
2024-07-11 09:18:58,704 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=43.5 pTM=0.34 ipTM=0.243 tol=5.52
2024-07-11 09:18:58,705 alphafold2_multimer_v3_model_4_seed_000 took 2334.2s (30 recycles)
2024-07-11 09:20:15,403 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=44 pTM=0.336 ipTM=0.201
2024-07-11 09:21:30,700 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=45.1 pTM=0.337 ipTM=0.216 tol=16.3
2024-07-11 09:22:46,053 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=45 pTM=0.334 ipTM=0.222 tol=10.3
2024-07-11 09:24:01,457 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=45.2 pTM=0.331 ipTM=0.231 tol=7.05
2024-07-11 09:25:16,910 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=45.2 pTM=0.329 ipTM=0.234 tol=11.2
2024-07-11 09:26:32,340 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=46 pTM=0.333 ipTM=0.234 tol=8.02
2024-07-11 09:27:47,695 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=45.7 pTM=0.335 ipTM=0.233 tol=6.38
2024-07-11 09:29:03,110 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=45.4 pTM=0.336 ipTM=0.234 tol=10.2
2024-07-11 09:30:18,520 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=45.3 pTM=0.332 ipTM=0.234 tol=10.1
2024-07-11 09:31:33,996 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=45.9 pTM=0.337 ipTM=0.235 tol=11.5
2024-07-11 09:32:49,372 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=45.6 pTM=0.335 ipTM=0.233 tol=10.8
2024-07-11 09:34:04,751 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=45.5 pTM=0.334 ipTM=0.236 tol=9.84
2024-07-11 09:35:20,114 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=45.4 pTM=0.335 ipTM=0.232 tol=10.9
2024-07-11 09:36:35,539 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=45.6 pTM=0.339 ipTM=0.234 tol=9.09
2024-07-11 09:37:50,888 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=45.5 pTM=0.338 ipTM=0.23 tol=5.86
2024-07-11 09:39:06,187 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=45.3 pTM=0.337 ipTM=0.233 tol=10.1
2024-07-11 09:40:21,552 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=45.4 pTM=0.34 ipTM=0.238 tol=5.31
2024-07-11 09:41:36,927 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=45.4 pTM=0.336 ipTM=0.236 tol=8.41
2024-07-11 09:42:52,275 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=45.5 pTM=0.337 ipTM=0.232 tol=10.2
2024-07-11 09:44:07,619 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=45.3 pTM=0.338 ipTM=0.233 tol=9.46
2024-07-11 09:45:22,936 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=45.2 pTM=0.34 ipTM=0.232 tol=10.4
2024-07-11 09:46:38,172 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=45.5 pTM=0.338 ipTM=0.235 tol=6.54
2024-07-11 09:47:53,399 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=45.4 pTM=0.338 ipTM=0.234 tol=8.49
2024-07-11 09:49:08,660 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=45.5 pTM=0.336 ipTM=0.235 tol=9.12
2024-07-11 09:50:24,043 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=45.5 pTM=0.335 ipTM=0.236 tol=4.47
2024-07-11 09:51:39,446 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=45.2 pTM=0.336 ipTM=0.234 tol=10.7
2024-07-11 09:52:54,827 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=45.6 pTM=0.341 ipTM=0.234 tol=8.82
2024-07-11 09:54:10,193 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=45.3 pTM=0.342 ipTM=0.237 tol=7.66
2024-07-11 09:55:25,539 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=45.6 pTM=0.341 ipTM=0.236 tol=4.75
2024-07-11 09:56:40,864 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=45.6 pTM=0.341 ipTM=0.238 tol=8.86
2024-07-11 09:57:56,125 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=45.4 pTM=0.34 ipTM=0.236 tol=8.51
2024-07-11 09:57:56,126 alphafold2_multimer_v3_model_5_seed_000 took 2336.0s (30 recycles)
2024-07-11 09:57:57,572 reranking models by 'multimer' metric
2024-07-11 09:57:59,315 Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
2024-07-11 10:01:18,286 Relaxation took 200.7s
2024-07-11 10:01:18,286 rank_001_alphafold2_multimer_v3_model_2_seed_000 pLDDT=47.4 pTM=0.375 ipTM=0.333
2024-07-11 10:04:37,777 Relaxation took 199.5s
2024-07-11 10:04:37,777 rank_002_alphafold2_multimer_v3_model_1_seed_000 pLDDT=46.6 pTM=0.328 ipTM=0.261
2024-07-11 10:06:58,870 Relaxation took 141.1s
2024-07-11 10:06:58,870 rank_003_alphafold2_multimer_v3_model_4_seed_000 pLDDT=43.5 pTM=0.34 ipTM=0.243
2024-07-11 10:09:43,128 Relaxation took 164.3s
2024-07-11 10:09:43,128 rank_004_alphafold2_multimer_v3_model_5_seed_000 pLDDT=45.4 pTM=0.34 ipTM=0.236
2024-07-11 10:13:02,514 Relaxation took 199.4s
2024-07-11 10:13:02,514 rank_005_alphafold2_multimer_v3_model_3_seed_000 pLDDT=45.3 pTM=0.333 ipTM=0.232
2024-07-11 10:13:05,793 Done