2024-07-11 07:42:27,144 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3) 2024-07-11 07:42:27,474 Running on GPU 2024-07-11 07:42:31,259 Found 6 citations for tools or databases 2024-07-11 07:42:31,259 Query 1/1: MC3R_TEDC1 (length 818) 2024-07-11 07:42:31,709 Sleeping for 10s. Reason: PENDING 2024-07-11 07:42:42,124 Sleeping for 7s. Reason: RUNNING 2024-07-11 07:42:49,542 Sleeping for 7s. Reason: RUNNING 2024-07-11 07:42:56,945 Sleeping for 6s. Reason: RUNNING 2024-07-11 07:43:03,364 Sleeping for 9s. Reason: RUNNING 2024-07-11 07:43:12,775 Sleeping for 8s. Reason: RUNNING 2024-07-11 07:43:21,188 Sleeping for 9s. Reason: RUNNING 2024-07-11 07:43:30,596 Sleeping for 10s. Reason: RUNNING 2024-07-11 07:43:41,010 Sleeping for 8s. Reason: RUNNING 2024-07-11 07:43:49,417 Sleeping for 8s. Reason: RUNNING 2024-07-11 07:43:57,837 Sleeping for 10s. Reason: RUNNING 2024-07-11 07:44:08,244 Sleeping for 9s. Reason: RUNNING 2024-07-11 07:44:19,090 Sleeping for 6s. Reason: PENDING 2024-07-11 07:44:25,543 Sleeping for 5s. Reason: RUNNING 2024-07-11 07:44:30,957 Sleeping for 8s. Reason: RUNNING 2024-07-11 07:44:39,372 Sleeping for 5s. Reason: RUNNING 2024-07-11 07:44:44,775 Sleeping for 6s. Reason: RUNNING 2024-07-11 07:44:51,173 Sleeping for 8s. Reason: RUNNING 2024-07-11 07:44:59,578 Sleeping for 7s. Reason: RUNNING 2024-07-11 07:45:06,992 Sleeping for 9s. Reason: RUNNING 2024-07-11 07:45:16,401 Sleeping for 8s. Reason: RUNNING 2024-07-11 07:45:26,466 Setting max_seq=508, max_extra_seq=2048 2024-07-11 07:48:06,691 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=55.2 pTM=0.386 ipTM=0.145 2024-07-11 07:48:20,460 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=57.1 pTM=0.388 ipTM=0.146 tol=6.33 2024-07-11 07:48:34,273 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=58.2 pTM=0.389 ipTM=0.146 tol=5.91 2024-07-11 07:48:48,076 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=63.3 pTM=0.399 ipTM=0.168 tol=10.6 2024-07-11 07:49:01,915 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=63.5 pTM=0.396 ipTM=0.172 tol=4.82 2024-07-11 07:49:15,740 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=64.7 pTM=0.419 ipTM=0.229 tol=3.32 2024-07-11 07:49:29,546 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=66.1 pTM=0.452 ipTM=0.291 tol=1.2 2024-07-11 07:49:43,347 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=66.1 pTM=0.486 ipTM=0.375 tol=0.985 2024-07-11 07:49:57,178 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=66.6 pTM=0.487 ipTM=0.358 tol=0.572 2024-07-11 07:50:11,011 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=67 pTM=0.501 ipTM=0.392 tol=0.564 2024-07-11 07:50:24,846 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=67.2 pTM=0.502 ipTM=0.387 tol=0.628 2024-07-11 07:50:38,679 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=67.3 pTM=0.506 ipTM=0.391 tol=0.392 2024-07-11 07:50:38,680 alphafold2_multimer_v3_model_1_seed_000 took 307.2s (11 recycles) 2024-07-11 07:50:52,962 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=56.9 pTM=0.393 ipTM=0.172 2024-07-11 07:51:06,864 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=57.6 pTM=0.367 ipTM=0.15 tol=4.93 2024-07-11 07:51:20,722 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=57.9 pTM=0.38 ipTM=0.153 tol=3.61 2024-07-11 07:51:34,622 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=58.6 pTM=0.378 ipTM=0.146 tol=3.32 2024-07-11 07:51:48,506 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=57.8 pTM=0.374 ipTM=0.15 tol=1.9 2024-07-11 07:52:02,396 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=58.1 pTM=0.369 ipTM=0.188 tol=7.34 2024-07-11 07:52:16,297 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=57.7 pTM=0.381 ipTM=0.197 tol=20.9 2024-07-11 07:52:30,201 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=57.5 pTM=0.383 ipTM=0.178 tol=5.62 2024-07-11 07:52:44,067 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=58.8 pTM=0.39 ipTM=0.177 tol=2.59 2024-07-11 07:52:57,962 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=59.2 pTM=0.393 ipTM=0.193 tol=2.17 2024-07-11 07:53:11,842 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=58.4 pTM=0.395 ipTM=0.183 tol=1.76 2024-07-11 07:53:25,704 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=58.7 pTM=0.414 ipTM=0.271 tol=2.28 2024-07-11 07:53:39,594 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=58.5 pTM=0.397 ipTM=0.204 tol=3.35 2024-07-11 07:53:53,443 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=57.6 pTM=0.394 ipTM=0.238 tol=4.32 2024-07-11 07:54:07,325 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=58.4 pTM=0.394 ipTM=0.179 tol=10.9 2024-07-11 07:54:21,202 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=58.1 pTM=0.418 ipTM=0.383 tol=5.46 2024-07-11 07:54:35,067 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=59.7 pTM=0.399 ipTM=0.183 tol=3.46 2024-07-11 07:54:48,928 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=61.1 pTM=0.437 ipTM=0.429 tol=9.75 2024-07-11 07:55:02,791 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=63 pTM=0.404 ipTM=0.204 tol=5.7 2024-07-11 07:55:16,630 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=62.6 pTM=0.402 ipTM=0.212 tol=7.5 2024-07-11 07:55:30,482 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=63 pTM=0.408 ipTM=0.231 tol=1.6 2024-07-11 07:55:44,334 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=62.8 pTM=0.402 ipTM=0.213 tol=3.08 2024-07-11 07:55:58,170 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=62.7 pTM=0.409 ipTM=0.217 tol=3.44 2024-07-11 07:56:12,037 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=62.4 pTM=0.398 ipTM=0.193 tol=3.09 2024-07-11 07:56:25,872 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=62.9 pTM=0.407 ipTM=0.229 tol=3.11 2024-07-11 07:56:39,726 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=63.7 pTM=0.402 ipTM=0.199 tol=2.67 2024-07-11 07:56:53,591 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=63.3 pTM=0.398 ipTM=0.188 tol=2.31 2024-07-11 07:57:07,425 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=63.2 pTM=0.397 ipTM=0.19 tol=1.98 2024-07-11 07:57:21,291 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=62.2 pTM=0.398 ipTM=0.207 tol=1.74 2024-07-11 07:57:35,117 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=62.7 pTM=0.402 ipTM=0.213 tol=1.53 2024-07-11 07:57:48,959 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=63 pTM=0.41 ipTM=0.238 tol=3.44 2024-07-11 07:57:48,960 alphafold2_multimer_v3_model_2_seed_000 took 429.9s (30 recycles) 2024-07-11 07:58:03,292 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=53 pTM=0.36 ipTM=0.288 2024-07-11 07:58:17,171 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=53.4 pTM=0.36 ipTM=0.177 tol=9.62 2024-07-11 07:58:31,044 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=56 pTM=0.36 ipTM=0.179 tol=3.11 2024-07-11 07:58:44,922 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=57.4 pTM=0.362 ipTM=0.162 tol=3.11 2024-07-11 07:58:58,781 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=57.1 pTM=0.364 ipTM=0.164 tol=2.29 2024-07-11 07:59:12,658 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=57.3 pTM=0.36 ipTM=0.158 tol=2.28 2024-07-11 07:59:26,514 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=57 pTM=0.351 ipTM=0.167 tol=2.25 2024-07-11 07:59:40,394 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=55.6 pTM=0.35 ipTM=0.156 tol=2.71 2024-07-11 07:59:54,268 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=56 pTM=0.36 ipTM=0.157 tol=3.61 2024-07-11 08:00:08,125 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=56.2 pTM=0.364 ipTM=0.17 tol=2.45 2024-07-11 08:00:21,998 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=56 pTM=0.37 ipTM=0.171 tol=2.12 2024-07-11 08:00:35,854 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=56.4 pTM=0.369 ipTM=0.168 tol=1.6 2024-07-11 08:00:49,716 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=56.2 pTM=0.376 ipTM=0.179 tol=1.3 2024-07-11 08:01:03,595 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=56.2 pTM=0.374 ipTM=0.178 tol=0.99 2024-07-11 08:01:17,435 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=56.6 pTM=0.376 ipTM=0.181 tol=1.06 2024-07-11 08:01:31,286 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=55.7 pTM=0.379 ipTM=0.19 tol=0.797 2024-07-11 08:01:45,148 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=57.2 pTM=0.384 ipTM=0.209 tol=2.27 2024-07-11 08:01:58,988 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=56.8 pTM=0.379 ipTM=0.205 tol=1.36 2024-07-11 08:02:12,834 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=57.5 pTM=0.383 ipTM=0.197 tol=0.91 2024-07-11 08:02:26,684 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=57.2 pTM=0.385 ipTM=0.208 tol=1.63 2024-07-11 08:02:40,530 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=56.6 pTM=0.384 ipTM=0.198 tol=0.961 2024-07-11 08:02:54,389 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=57.2 pTM=0.388 ipTM=0.213 tol=1.12 2024-07-11 08:03:08,244 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=56.8 pTM=0.393 ipTM=0.22 tol=0.589 2024-07-11 08:03:22,085 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=57.7 pTM=0.396 ipTM=0.232 tol=1.25 2024-07-11 08:03:35,930 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=57.9 pTM=0.4 ipTM=0.24 tol=0.596 2024-07-11 08:03:49,771 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=58.2 pTM=0.404 ipTM=0.263 tol=0.881 2024-07-11 08:04:03,624 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=57.8 pTM=0.401 ipTM=0.249 tol=0.532 2024-07-11 08:04:17,485 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=57.8 pTM=0.404 ipTM=0.252 tol=0.835 2024-07-11 08:04:31,311 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=57.2 pTM=0.407 ipTM=0.27 tol=0.519 2024-07-11 08:04:45,142 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=57.4 pTM=0.406 ipTM=0.272 tol=1.26 2024-07-11 08:04:58,958 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=56.9 pTM=0.403 ipTM=0.247 tol=4.34 2024-07-11 08:04:58,958 alphafold2_multimer_v3_model_3_seed_000 took 429.6s (30 recycles) 2024-07-11 08:05:13,211 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=52.1 pTM=0.41 ipTM=0.242 2024-07-11 08:05:27,050 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=52.8 pTM=0.393 ipTM=0.205 tol=7.54 2024-07-11 08:05:40,884 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=52.8 pTM=0.4 ipTM=0.233 tol=4.12 2024-07-11 08:05:54,725 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=53.9 pTM=0.399 ipTM=0.221 tol=3.94 2024-07-11 08:06:08,562 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=53.6 pTM=0.394 ipTM=0.198 tol=3.38 2024-07-11 08:06:22,389 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=54.4 pTM=0.394 ipTM=0.205 tol=2.53 2024-07-11 08:06:36,234 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=54.9 pTM=0.393 ipTM=0.199 tol=1.97 2024-07-11 08:06:50,075 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=53.8 pTM=0.392 ipTM=0.209 tol=2.17 2024-07-11 08:07:03,911 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=55.1 pTM=0.39 ipTM=0.19 tol=2.26 2024-07-11 08:07:17,745 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=55.9 pTM=0.396 ipTM=0.239 tol=2.89 2024-07-11 08:07:31,585 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=55.6 pTM=0.388 ipTM=0.194 tol=2.35 2024-07-11 08:07:45,418 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=55.5 pTM=0.397 ipTM=0.226 tol=2.72 2024-07-11 08:07:59,263 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=56.3 pTM=0.388 ipTM=0.186 tol=2.12 2024-07-11 08:08:13,099 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=55.6 pTM=0.395 ipTM=0.212 tol=1.88 2024-07-11 08:08:26,951 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=56.2 pTM=0.388 ipTM=0.192 tol=2.39 2024-07-11 08:08:40,781 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=55.1 pTM=0.397 ipTM=0.234 tol=2.4 2024-07-11 08:08:54,604 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=56.2 pTM=0.391 ipTM=0.214 tol=2.16 2024-07-11 08:09:08,446 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=55.9 pTM=0.392 ipTM=0.221 tol=2.26 2024-07-11 08:09:22,294 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=56 pTM=0.394 ipTM=0.217 tol=2.45 2024-07-11 08:09:36,138 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=56.1 pTM=0.397 ipTM=0.227 tol=2.36 2024-07-11 08:09:49,984 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=56 pTM=0.391 ipTM=0.197 tol=2.45 2024-07-11 08:10:03,829 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=55.8 pTM=0.402 ipTM=0.249 tol=2.34 2024-07-11 08:10:17,674 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=55.1 pTM=0.392 ipTM=0.213 tol=1.66 2024-07-11 08:10:31,522 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=55.8 pTM=0.395 ipTM=0.218 tol=2.23 2024-07-11 08:10:45,363 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=56.7 pTM=0.39 ipTM=0.186 tol=1.58 2024-07-11 08:10:59,211 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=56.1 pTM=0.396 ipTM=0.218 tol=1.27 2024-07-11 08:11:13,043 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=55.9 pTM=0.388 ipTM=0.186 tol=1.83 2024-07-11 08:11:26,890 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=55.3 pTM=0.394 ipTM=0.213 tol=1.78 2024-07-11 08:11:40,721 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=55.3 pTM=0.393 ipTM=0.192 tol=1.66 2024-07-11 08:11:54,568 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=55.5 pTM=0.385 ipTM=0.191 tol=1.79 2024-07-11 08:12:08,410 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=55.5 pTM=0.386 ipTM=0.184 tol=2.71 2024-07-11 08:12:08,410 alphafold2_multimer_v3_model_4_seed_000 took 429.0s (30 recycles) 2024-07-11 08:12:22,695 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=50.9 pTM=0.396 ipTM=0.295 2024-07-11 08:12:36,540 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=53.3 pTM=0.385 ipTM=0.187 tol=14.7 2024-07-11 08:12:50,362 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=54.2 pTM=0.389 ipTM=0.178 tol=3.92 2024-07-11 08:13:04,193 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=56.4 pTM=0.388 ipTM=0.167 tol=3.47 2024-07-11 08:13:18,021 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=58.1 pTM=0.383 ipTM=0.162 tol=2.73 2024-07-11 08:13:31,861 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=59.5 pTM=0.383 ipTM=0.162 tol=1.82 2024-07-11 08:13:45,702 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=60.4 pTM=0.386 ipTM=0.168 tol=1.7 2024-07-11 08:13:59,536 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=59.2 pTM=0.383 ipTM=0.166 tol=2.1 2024-07-11 08:14:13,371 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=60.1 pTM=0.388 ipTM=0.167 tol=2.57 2024-07-11 08:14:27,194 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=60.1 pTM=0.39 ipTM=0.184 tol=1.49 2024-07-11 08:14:41,016 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=60.7 pTM=0.396 ipTM=0.195 tol=1.34 2024-07-11 08:14:54,837 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=59.9 pTM=0.391 ipTM=0.19 tol=3.19 2024-07-11 08:15:08,664 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=60.1 pTM=0.395 ipTM=0.194 tol=1.18 2024-07-11 08:15:22,488 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=60 pTM=0.389 ipTM=0.182 tol=1.32 2024-07-11 08:15:36,302 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=60.2 pTM=0.395 ipTM=0.191 tol=1.08 2024-07-11 08:15:50,108 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=59.2 pTM=0.395 ipTM=0.199 tol=0.864 2024-07-11 08:16:03,916 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=60.7 pTM=0.403 ipTM=0.224 tol=1.44 2024-07-11 08:16:17,721 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=60.5 pTM=0.403 ipTM=0.225 tol=0.75 2024-07-11 08:16:31,529 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=61 pTM=0.402 ipTM=0.211 tol=0.905 2024-07-11 08:16:45,339 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=60.6 pTM=0.401 ipTM=0.208 tol=1.3 2024-07-11 08:16:59,163 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=60.1 pTM=0.397 ipTM=0.205 tol=4.29 2024-07-11 08:17:12,978 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=59.9 pTM=0.396 ipTM=0.209 tol=2.57 2024-07-11 08:17:26,789 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=59.5 pTM=0.395 ipTM=0.2 tol=1.04 2024-07-11 08:17:40,597 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=59.9 pTM=0.399 ipTM=0.216 tol=0.522 2024-07-11 08:17:54,405 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=60.7 pTM=0.404 ipTM=0.224 tol=0.794 2024-07-11 08:18:08,214 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=60.2 pTM=0.399 ipTM=0.215 tol=0.572 2024-07-11 08:18:22,031 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=59.8 pTM=0.4 ipTM=0.214 tol=0.893 2024-07-11 08:18:35,846 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=59.4 pTM=0.396 ipTM=0.213 tol=1.01 2024-07-11 08:18:49,650 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=58.9 pTM=0.396 ipTM=0.214 tol=0.8 2024-07-11 08:19:03,456 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=59.5 pTM=0.399 ipTM=0.225 tol=0.742 2024-07-11 08:19:17,272 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=59.7 pTM=0.399 ipTM=0.214 tol=0.775 2024-07-11 08:19:17,272 alphafold2_multimer_v3_model_5_seed_000 took 428.4s (30 recycles) 2024-07-11 08:19:17,695 reranking models by 'multimer' metric 2024-07-11 08:19:18,735 Warning: importing 'simtk.openmm' is deprecated. Import 'openmm' instead. 2024-07-11 08:20:05,209 Relaxation took 47.5s 2024-07-11 08:20:05,210 rank_001_alphafold2_multimer_v3_model_1_seed_000 pLDDT=67.3 pTM=0.506 ipTM=0.391 2024-07-11 08:21:05,784 Relaxation took 60.6s 2024-07-11 08:21:05,784 rank_002_alphafold2_multimer_v3_model_3_seed_000 pLDDT=56.9 pTM=0.403 ipTM=0.247 2024-07-11 08:22:12,476 Relaxation took 66.7s 2024-07-11 08:22:12,476 rank_003_alphafold2_multimer_v3_model_2_seed_000 pLDDT=63 pTM=0.41 ipTM=0.238 2024-07-11 08:23:19,585 Relaxation took 67.1s 2024-07-11 08:23:19,586 rank_004_alphafold2_multimer_v3_model_5_seed_000 pLDDT=59.7 pTM=0.399 ipTM=0.214 2024-07-11 08:24:24,812 Relaxation took 65.2s 2024-07-11 08:24:24,812 rank_005_alphafold2_multimer_v3_model_4_seed_000 pLDDT=55.5 pTM=0.386 ipTM=0.184 2024-07-11 08:24:26,432 Done