2024-07-11 08:26:47,510 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3) 2024-07-11 08:26:47,834 Running on GPU 2024-07-11 08:26:51,482 Found 6 citations for tools or databases 2024-07-11 08:26:51,482 Query 1/1: MFR1L_NCF2 (length 818) 2024-07-11 08:26:51,919 Sleeping for 9s. Reason: PENDING 2024-07-11 08:27:01,336 Sleeping for 6s. Reason: RUNNING 2024-07-11 08:27:07,748 Sleeping for 10s. Reason: RUNNING 2024-07-11 08:27:18,153 Sleeping for 9s. Reason: RUNNING 2024-07-11 08:27:27,556 Sleeping for 8s. Reason: RUNNING 2024-07-11 08:27:35,973 Sleeping for 7s. Reason: RUNNING 2024-07-11 08:27:43,379 Sleeping for 10s. Reason: RUNNING 2024-07-11 08:27:53,782 Sleeping for 7s. Reason: RUNNING 2024-07-11 08:28:01,196 Sleeping for 8s. Reason: RUNNING 2024-07-11 08:28:09,613 Sleeping for 9s. Reason: RUNNING 2024-07-11 08:28:19,028 Sleeping for 7s. Reason: RUNNING 2024-07-11 08:28:26,446 Sleeping for 5s. Reason: RUNNING 2024-07-11 08:28:31,845 Sleeping for 10s. Reason: RUNNING 2024-07-11 08:28:42,259 Sleeping for 5s. Reason: RUNNING 2024-07-11 08:28:47,667 Sleeping for 7s. Reason: RUNNING 2024-07-11 08:28:56,660 Sleeping for 6s. Reason: PENDING 2024-07-11 08:29:03,067 Sleeping for 10s. Reason: RUNNING 2024-07-11 08:29:13,515 Sleeping for 8s. Reason: RUNNING 2024-07-11 08:29:21,923 Sleeping for 8s. Reason: RUNNING 2024-07-11 08:29:30,320 Sleeping for 9s. Reason: RUNNING 2024-07-11 08:29:39,736 Sleeping for 6s. Reason: RUNNING 2024-07-11 08:29:46,130 Sleeping for 5s. Reason: RUNNING 2024-07-11 08:29:51,543 Sleeping for 5s. Reason: RUNNING 2024-07-11 08:29:56,938 Sleeping for 9s. Reason: RUNNING 2024-07-11 08:30:06,351 Sleeping for 5s. Reason: RUNNING 2024-07-11 08:30:11,742 Sleeping for 6s. Reason: RUNNING 2024-07-11 08:30:18,159 Sleeping for 7s. Reason: RUNNING 2024-07-11 08:30:28,332 Setting max_seq=508, max_extra_seq=2048 2024-07-11 08:33:08,021 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=51.8 pTM=0.348 ipTM=0.201 2024-07-11 08:33:21,735 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=51.8 pTM=0.343 ipTM=0.191 tol=8.72 2024-07-11 08:33:35,484 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=52 pTM=0.341 ipTM=0.187 tol=5.92 2024-07-11 08:33:49,249 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=52.6 pTM=0.342 ipTM=0.188 tol=3.66 2024-07-11 08:34:03,039 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=52.2 pTM=0.344 ipTM=0.192 tol=2.55 2024-07-11 08:34:16,836 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=52.3 pTM=0.343 ipTM=0.19 tol=2.5 2024-07-11 08:34:30,649 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=52.4 pTM=0.342 ipTM=0.189 tol=1.4 2024-07-11 08:34:44,458 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=52.5 pTM=0.342 ipTM=0.188 tol=1.18 2024-07-11 08:34:58,307 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=52.7 pTM=0.344 ipTM=0.194 tol=1.29 2024-07-11 08:35:12,154 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=52.4 pTM=0.342 ipTM=0.187 tol=1.3 2024-07-11 08:35:25,998 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=52.2 pTM=0.343 ipTM=0.191 tol=1.17 2024-07-11 08:35:39,849 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=52.2 pTM=0.342 ipTM=0.19 tol=1.12 2024-07-11 08:35:53,693 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=52.4 pTM=0.34 ipTM=0.185 tol=1.3 2024-07-11 08:36:07,542 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=52.4 pTM=0.342 ipTM=0.187 tol=1.48 2024-07-11 08:36:21,388 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=52.5 pTM=0.342 ipTM=0.189 tol=1.58 2024-07-11 08:36:35,233 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=52.3 pTM=0.344 ipTM=0.191 tol=1.54 2024-07-11 08:36:49,078 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=52.5 pTM=0.342 ipTM=0.188 tol=1.96 2024-07-11 08:37:02,937 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=52.6 pTM=0.34 ipTM=0.183 tol=1.36 2024-07-11 08:37:16,778 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=52.5 pTM=0.34 ipTM=0.183 tol=1.64 2024-07-11 08:37:30,616 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=52.3 pTM=0.343 ipTM=0.188 tol=1.83 2024-07-11 08:37:44,455 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=52.3 pTM=0.343 ipTM=0.19 tol=1.65 2024-07-11 08:37:58,303 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=52.5 pTM=0.341 ipTM=0.188 tol=1.45 2024-07-11 08:38:12,158 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=52.2 pTM=0.342 ipTM=0.189 tol=1.47 2024-07-11 08:38:25,999 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=52.3 pTM=0.343 ipTM=0.189 tol=1.85 2024-07-11 08:38:39,856 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=51.9 pTM=0.343 ipTM=0.19 tol=1.79 2024-07-11 08:38:53,703 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=52.2 pTM=0.344 ipTM=0.192 tol=1.79 2024-07-11 08:39:07,546 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=52 pTM=0.343 ipTM=0.19 tol=1.51 2024-07-11 08:39:21,386 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=52.1 pTM=0.342 ipTM=0.188 tol=1.62 2024-07-11 08:39:35,238 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=52.1 pTM=0.341 ipTM=0.185 tol=1.85 2024-07-11 08:39:49,089 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=51.8 pTM=0.342 ipTM=0.187 tol=1.92 2024-07-11 08:40:02,950 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=51.9 pTM=0.344 ipTM=0.19 tol=2.12 2024-07-11 08:40:02,950 alphafold2_multimer_v3_model_1_seed_000 took 569.7s (30 recycles) 2024-07-11 08:40:17,237 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=52.6 pTM=0.345 ipTM=0.183 2024-07-11 08:40:31,120 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=53.8 pTM=0.337 ipTM=0.166 tol=9.74 2024-07-11 08:40:45,033 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=53.5 pTM=0.341 ipTM=0.18 tol=6.32 2024-07-11 08:40:58,945 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=53.9 pTM=0.335 ipTM=0.161 tol=5.2 2024-07-11 08:41:12,842 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=54 pTM=0.337 ipTM=0.167 tol=3.99 2024-07-11 08:41:26,763 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=53.7 pTM=0.336 ipTM=0.163 tol=4.2 2024-07-11 08:41:40,665 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=53.7 pTM=0.334 ipTM=0.16 tol=4.54 2024-07-11 08:41:54,598 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=54.7 pTM=0.338 ipTM=0.175 tol=4.23 2024-07-11 08:42:08,509 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=54.2 pTM=0.339 ipTM=0.17 tol=3.17 2024-07-11 08:42:22,419 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=54.1 pTM=0.338 ipTM=0.169 tol=3.37 2024-07-11 08:42:36,337 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=54.4 pTM=0.338 ipTM=0.171 tol=1.73 2024-07-11 08:42:50,238 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=54.5 pTM=0.338 ipTM=0.173 tol=1.52 2024-07-11 08:43:04,154 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=54.2 pTM=0.337 ipTM=0.167 tol=3.46 2024-07-11 08:43:18,082 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=54.2 pTM=0.337 ipTM=0.167 tol=2.1 2024-07-11 08:43:32,003 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=54.1 pTM=0.338 ipTM=0.169 tol=4.91 2024-07-11 08:43:45,928 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=54 pTM=0.339 ipTM=0.172 tol=4.45 2024-07-11 08:43:59,855 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=54.1 pTM=0.338 ipTM=0.169 tol=5.16 2024-07-11 08:44:13,795 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=54.2 pTM=0.338 ipTM=0.169 tol=4.73 2024-07-11 08:44:27,722 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=54.1 pTM=0.338 ipTM=0.17 tol=4.98 2024-07-11 08:44:41,635 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=54.3 pTM=0.34 ipTM=0.174 tol=4.09 2024-07-11 08:44:55,555 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=54.2 pTM=0.337 ipTM=0.167 tol=2.94 2024-07-11 08:45:09,480 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=54.4 pTM=0.339 ipTM=0.172 tol=4.22 2024-07-11 08:45:23,402 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=54.2 pTM=0.337 ipTM=0.166 tol=3.59 2024-07-11 08:45:37,334 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=53.9 pTM=0.342 ipTM=0.176 tol=1.96 2024-07-11 08:45:51,271 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=53.6 pTM=0.338 ipTM=0.168 tol=2.02 2024-07-11 08:46:05,183 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=54.2 pTM=0.347 ipTM=0.193 tol=4.67 2024-07-11 08:46:19,088 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=53.8 pTM=0.342 ipTM=0.176 tol=3.81 2024-07-11 08:46:33,010 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=54 pTM=0.341 ipTM=0.173 tol=2.71 2024-07-11 08:46:46,924 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=54.2 pTM=0.343 ipTM=0.177 tol=2.8 2024-07-11 08:47:00,835 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=53.8 pTM=0.341 ipTM=0.172 tol=3.1 2024-07-11 08:47:14,767 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=54.3 pTM=0.341 ipTM=0.172 tol=2.16 2024-07-11 08:47:14,768 alphafold2_multimer_v3_model_2_seed_000 took 431.4s (30 recycles) 2024-07-11 08:47:29,133 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=52.7 pTM=0.351 ipTM=0.213 2024-07-11 08:47:43,092 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=53.7 pTM=0.361 ipTM=0.243 tol=14.7 2024-07-11 08:47:57,051 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=54.5 pTM=0.371 ipTM=0.356 tol=11.4 2024-07-11 08:48:10,977 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=54.2 pTM=0.37 ipTM=0.333 tol=7.2 2024-07-11 08:48:24,889 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=54.6 pTM=0.378 ipTM=0.364 tol=3.36 2024-07-11 08:48:38,816 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=54 pTM=0.384 ipTM=0.37 tol=2.64 2024-07-11 08:48:52,740 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=53.6 pTM=0.39 ipTM=0.381 tol=3.75 2024-07-11 08:49:06,658 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=54 pTM=0.395 ipTM=0.396 tol=3.27 2024-07-11 08:49:20,558 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=53.9 pTM=0.403 ipTM=0.397 tol=5.74 2024-07-11 08:49:34,464 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=54.3 pTM=0.4 ipTM=0.399 tol=3.03 2024-07-11 08:49:48,361 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=53.8 pTM=0.396 ipTM=0.388 tol=2.01 2024-07-11 08:50:02,268 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=54.3 pTM=0.398 ipTM=0.398 tol=1.46 2024-07-11 08:50:16,172 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=53.9 pTM=0.391 ipTM=0.382 tol=1.81 2024-07-11 08:50:30,083 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=54.8 pTM=0.397 ipTM=0.393 tol=1.33 2024-07-11 08:50:43,992 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=53.8 pTM=0.395 ipTM=0.388 tol=1.64 2024-07-11 08:50:57,918 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=54.4 pTM=0.399 ipTM=0.398 tol=1.65 2024-07-11 08:51:11,846 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=53.8 pTM=0.391 ipTM=0.386 tol=1.51 2024-07-11 08:51:25,759 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=54.6 pTM=0.399 ipTM=0.404 tol=1.35 2024-07-11 08:51:39,674 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=53.8 pTM=0.397 ipTM=0.399 tol=1.5 2024-07-11 08:51:53,577 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=54.5 pTM=0.404 ipTM=0.404 tol=2.16 2024-07-11 08:52:07,485 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=53.8 pTM=0.395 ipTM=0.388 tol=1.64 2024-07-11 08:52:21,395 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=54.7 pTM=0.406 ipTM=0.403 tol=1.51 2024-07-11 08:52:35,300 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=53.7 pTM=0.396 ipTM=0.392 tol=2 2024-07-11 08:52:49,202 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=54.5 pTM=0.408 ipTM=0.403 tol=1.67 2024-07-11 08:53:03,114 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=53.9 pTM=0.405 ipTM=0.399 tol=1.85 2024-07-11 08:53:17,014 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=54.2 pTM=0.402 ipTM=0.389 tol=1.46 2024-07-11 08:53:30,931 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=54.2 pTM=0.403 ipTM=0.397 tol=1.36 2024-07-11 08:53:44,844 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=53.9 pTM=0.399 ipTM=0.388 tol=1.04 2024-07-11 08:53:58,754 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=54.3 pTM=0.408 ipTM=0.409 tol=1.49 2024-07-11 08:54:12,649 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=53.8 pTM=0.4 ipTM=0.391 tol=2.33 2024-07-11 08:54:26,564 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=54.4 pTM=0.411 ipTM=0.417 tol=2.44 2024-07-11 08:54:26,565 alphafold2_multimer_v3_model_3_seed_000 took 431.4s (30 recycles) 2024-07-11 08:54:40,967 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=53.3 pTM=0.329 ipTM=0.161 2024-07-11 08:54:54,941 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=53.3 pTM=0.345 ipTM=0.298 tol=14.2 2024-07-11 08:55:08,924 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=52.7 pTM=0.335 ipTM=0.183 tol=11.2 2024-07-11 08:55:22,932 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=52.5 pTM=0.33 ipTM=0.157 tol=6.44 2024-07-11 08:55:36,926 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=52.4 pTM=0.327 ipTM=0.152 tol=6.43 2024-07-11 08:55:50,892 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=52.5 pTM=0.33 ipTM=0.158 tol=5.12 2024-07-11 08:56:04,854 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=52.4 pTM=0.33 ipTM=0.157 tol=4.52 2024-07-11 08:56:18,823 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=52.6 pTM=0.331 ipTM=0.161 tol=3.43 2024-07-11 08:56:32,789 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=52.8 pTM=0.332 ipTM=0.163 tol=3.87 2024-07-11 08:56:46,735 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=52.2 pTM=0.331 ipTM=0.162 tol=5.95 2024-07-11 08:57:00,683 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=52.7 pTM=0.332 ipTM=0.164 tol=4.36 2024-07-11 08:57:14,627 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=52.8 pTM=0.33 ipTM=0.16 tol=4.06 2024-07-11 08:57:28,563 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=52.9 pTM=0.331 ipTM=0.164 tol=3.18 2024-07-11 08:57:42,506 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=52.8 pTM=0.332 ipTM=0.163 tol=3.06 2024-07-11 08:57:56,438 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=52.6 pTM=0.334 ipTM=0.168 tol=3.88 2024-07-11 08:58:10,371 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=52.9 pTM=0.332 ipTM=0.163 tol=3.1 2024-07-11 08:58:24,316 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=53.2 pTM=0.333 ipTM=0.169 tol=2.95 2024-07-11 08:58:38,275 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=53.1 pTM=0.332 ipTM=0.169 tol=3.07 2024-07-11 08:58:52,233 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=53.2 pTM=0.334 ipTM=0.17 tol=2.99 2024-07-11 08:59:06,180 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=53.1 pTM=0.331 ipTM=0.164 tol=2.31 2024-07-11 08:59:20,113 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=52.9 pTM=0.335 ipTM=0.171 tol=3.78 2024-07-11 08:59:34,048 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=52.8 pTM=0.331 ipTM=0.161 tol=3.2 2024-07-11 08:59:47,987 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=53 pTM=0.331 ipTM=0.165 tol=2.89 2024-07-11 09:00:01,929 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=52.7 pTM=0.335 ipTM=0.169 tol=2.59 2024-07-11 09:00:15,861 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=52.8 pTM=0.334 ipTM=0.17 tol=2.79 2024-07-11 09:00:29,800 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=52.7 pTM=0.331 ipTM=0.163 tol=3.27 2024-07-11 09:00:43,734 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=53.2 pTM=0.333 ipTM=0.169 tol=2.83 2024-07-11 09:00:57,656 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=53.2 pTM=0.331 ipTM=0.162 tol=2.44 2024-07-11 09:01:11,583 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=53 pTM=0.331 ipTM=0.163 tol=2.49 2024-07-11 09:01:25,527 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=52.9 pTM=0.33 ipTM=0.16 tol=3.86 2024-07-11 09:01:39,461 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=52.8 pTM=0.33 ipTM=0.161 tol=4.55 2024-07-11 09:01:39,462 alphafold2_multimer_v3_model_4_seed_000 took 432.5s (30 recycles) 2024-07-11 09:01:53,803 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=50.1 pTM=0.34 ipTM=0.182 2024-07-11 09:02:07,718 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=51.2 pTM=0.352 ipTM=0.224 tol=8.28 2024-07-11 09:02:21,654 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=52.9 pTM=0.369 ipTM=0.358 tol=6.75 2024-07-11 09:02:35,578 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=52.8 pTM=0.374 ipTM=0.351 tol=10.4 2024-07-11 09:02:49,495 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=52.8 pTM=0.376 ipTM=0.348 tol=5.56 2024-07-11 09:03:03,412 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=52.4 pTM=0.378 ipTM=0.35 tol=6.18 2024-07-11 09:03:17,339 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=52.8 pTM=0.376 ipTM=0.357 tol=2.35 2024-07-11 09:03:31,259 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=52.9 pTM=0.378 ipTM=0.345 tol=4.68 2024-07-11 09:03:45,201 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=54.2 pTM=0.387 ipTM=0.379 tol=4.95 2024-07-11 09:03:59,121 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=52.7 pTM=0.379 ipTM=0.353 tol=6.63 2024-07-11 09:04:13,075 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=53.1 pTM=0.373 ipTM=0.353 tol=4.63 2024-07-11 09:04:27,005 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=53.2 pTM=0.377 ipTM=0.361 tol=4.14 2024-07-11 09:04:40,960 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=53.2 pTM=0.374 ipTM=0.362 tol=3.71 2024-07-11 09:04:54,887 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=52.8 pTM=0.37 ipTM=0.347 tol=8.27 2024-07-11 09:05:08,840 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=53.4 pTM=0.371 ipTM=0.352 tol=3.1 2024-07-11 09:05:22,777 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=53.1 pTM=0.373 ipTM=0.35 tol=2.51 2024-07-11 09:05:36,720 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=52.9 pTM=0.37 ipTM=0.348 tol=2.89 2024-07-11 09:05:50,641 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=53 pTM=0.393 ipTM=0.389 tol=5.15 2024-07-11 09:06:04,567 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=52.4 pTM=0.393 ipTM=0.389 tol=4.13 2024-07-11 09:06:18,490 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=53.1 pTM=0.407 ipTM=0.402 tol=3.29 2024-07-11 09:06:32,405 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=52 pTM=0.39 ipTM=0.377 tol=3.29 2024-07-11 09:06:46,319 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=53.1 pTM=0.404 ipTM=0.395 tol=2.85 2024-07-11 09:07:00,238 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=52.1 pTM=0.393 ipTM=0.387 tol=2.2 2024-07-11 09:07:14,151 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=52.6 pTM=0.401 ipTM=0.397 tol=1.82 2024-07-11 09:07:28,061 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=52.2 pTM=0.395 ipTM=0.392 tol=1.74 2024-07-11 09:07:41,969 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=52.6 pTM=0.403 ipTM=0.39 tol=2.25 2024-07-11 09:07:55,884 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=52.2 pTM=0.388 ipTM=0.373 tol=1.66 2024-07-11 09:08:09,787 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=52.8 pTM=0.409 ipTM=0.397 tol=2.34 2024-07-11 09:08:23,719 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=52.4 pTM=0.395 ipTM=0.384 tol=2.49 2024-07-11 09:08:37,652 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=52.8 pTM=0.409 ipTM=0.392 tol=2.19 2024-07-11 09:08:51,586 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=52.1 pTM=0.395 ipTM=0.385 tol=5.35 2024-07-11 09:08:51,586 alphafold2_multimer_v3_model_5_seed_000 took 431.7s (30 recycles) 2024-07-11 09:08:52,010 reranking models by 'multimer' metric 2024-07-11 09:08:55,329 Warning: importing 'simtk.openmm' is deprecated. Import 'openmm' instead. 2024-07-11 09:09:33,687 Relaxation took 41.7s 2024-07-11 09:09:33,687 rank_001_alphafold2_multimer_v3_model_3_seed_000 pLDDT=54.4 pTM=0.411 ipTM=0.417 2024-07-11 09:10:30,452 Relaxation took 56.8s 2024-07-11 09:10:30,453 rank_002_alphafold2_multimer_v3_model_5_seed_000 pLDDT=52.1 pTM=0.395 ipTM=0.385 2024-07-11 09:11:35,887 Relaxation took 65.4s 2024-07-11 09:11:35,887 rank_003_alphafold2_multimer_v3_model_1_seed_000 pLDDT=51.9 pTM=0.344 ipTM=0.19 2024-07-11 09:12:39,722 Relaxation took 63.8s 2024-07-11 09:12:39,722 rank_004_alphafold2_multimer_v3_model_2_seed_000 pLDDT=54.3 pTM=0.341 ipTM=0.172 2024-07-11 09:13:52,265 Relaxation took 72.5s 2024-07-11 09:13:52,265 rank_005_alphafold2_multimer_v3_model_4_seed_000 pLDDT=52.8 pTM=0.33 ipTM=0.161 2024-07-11 09:13:53,924 Done