2024-07-11 08:40:23,350 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3) 2024-07-11 08:40:23,686 Running on GPU 2024-07-11 08:40:27,368 Found 6 citations for tools or databases 2024-07-11 08:40:27,368 Query 1/1: MGP_CL18A (length 549) 2024-07-11 08:40:27,821 Sleeping for 9s. Reason: PENDING 2024-07-11 08:40:37,218 Sleeping for 6s. Reason: RUNNING 2024-07-11 08:40:43,636 Sleeping for 9s. Reason: RUNNING 2024-07-11 08:40:53,043 Sleeping for 6s. Reason: RUNNING 2024-07-11 08:40:59,432 Sleeping for 8s. Reason: RUNNING 2024-07-11 08:41:07,848 Sleeping for 8s. Reason: RUNNING 2024-07-11 08:41:16,238 Sleeping for 6s. Reason: RUNNING 2024-07-11 08:41:22,665 Sleeping for 5s. Reason: RUNNING 2024-07-11 08:41:28,082 Sleeping for 9s. Reason: RUNNING 2024-07-11 08:41:37,492 Sleeping for 7s. Reason: RUNNING 2024-07-11 08:41:44,894 Sleeping for 8s. Reason: RUNNING 2024-07-11 08:41:54,883 Sleeping for 5s. Reason: PENDING 2024-07-11 08:42:00,285 Sleeping for 9s. Reason: RUNNING 2024-07-11 08:42:09,685 Sleeping for 9s. Reason: RUNNING 2024-07-11 08:42:19,086 Sleeping for 6s. Reason: RUNNING 2024-07-11 08:42:25,492 Sleeping for 8s. Reason: RUNNING 2024-07-11 08:42:33,898 Sleeping for 9s. Reason: RUNNING 2024-07-11 08:42:45,523 Setting max_seq=508, max_extra_seq=2048 2024-07-11 08:45:37,935 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=55.1 pTM=0.409 ipTM=0.142 2024-07-11 08:45:44,239 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=56.8 pTM=0.429 ipTM=0.136 tol=11.9 2024-07-11 08:45:50,545 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=55.9 pTM=0.417 ipTM=0.14 tol=9.11 2024-07-11 08:45:56,859 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=56.4 pTM=0.408 ipTM=0.138 tol=4.97 2024-07-11 08:46:03,174 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=57.9 pTM=0.408 ipTM=0.169 tol=4.48 2024-07-11 08:46:09,491 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=58 pTM=0.405 ipTM=0.137 tol=2.64 2024-07-11 08:46:15,817 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=58.3 pTM=0.408 ipTM=0.132 tol=2.53 2024-07-11 08:46:22,153 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=57.8 pTM=0.406 ipTM=0.133 tol=2.23 2024-07-11 08:46:28,492 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=57.3 pTM=0.406 ipTM=0.135 tol=1.81 2024-07-11 08:46:34,831 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=58.1 pTM=0.404 ipTM=0.137 tol=1.21 2024-07-11 08:46:41,177 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=58.6 pTM=0.402 ipTM=0.131 tol=1.16 2024-07-11 08:46:47,521 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=58.4 pTM=0.405 ipTM=0.133 tol=1.92 2024-07-11 08:46:53,866 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=58.5 pTM=0.403 ipTM=0.132 tol=1.24 2024-07-11 08:47:00,219 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=58.2 pTM=0.405 ipTM=0.143 tol=1.6 2024-07-11 08:47:06,574 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=58.3 pTM=0.407 ipTM=0.132 tol=2.44 2024-07-11 08:47:12,932 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=58.7 pTM=0.406 ipTM=0.143 tol=1.68 2024-07-11 08:47:19,289 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=57.7 pTM=0.406 ipTM=0.133 tol=2.31 2024-07-11 08:47:25,648 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=58.5 pTM=0.412 ipTM=0.13 tol=5.11 2024-07-11 08:47:32,007 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=57.9 pTM=0.408 ipTM=0.136 tol=2.41 2024-07-11 08:47:38,365 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=57.9 pTM=0.411 ipTM=0.139 tol=2.4 2024-07-11 08:47:44,729 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=58.7 pTM=0.411 ipTM=0.133 tol=2.93 2024-07-11 08:47:51,097 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=58.5 pTM=0.413 ipTM=0.141 tol=1.93 2024-07-11 08:47:57,461 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=58.8 pTM=0.412 ipTM=0.135 tol=2.51 2024-07-11 08:48:03,833 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=58.4 pTM=0.413 ipTM=0.137 tol=1.59 2024-07-11 08:48:10,207 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=58.3 pTM=0.409 ipTM=0.135 tol=1.81 2024-07-11 08:48:16,577 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=58.7 pTM=0.408 ipTM=0.136 tol=2.11 2024-07-11 08:48:22,953 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=58.8 pTM=0.406 ipTM=0.137 tol=3 2024-07-11 08:48:29,323 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=58.1 pTM=0.408 ipTM=0.141 tol=3.51 2024-07-11 08:48:35,695 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=58.4 pTM=0.406 ipTM=0.149 tol=4.42 2024-07-11 08:48:42,073 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=60.9 pTM=0.401 ipTM=0.133 tol=7.11 2024-07-11 08:48:48,445 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=61.4 pTM=0.4 ipTM=0.14 tol=4.06 2024-07-11 08:48:48,446 alphafold2_multimer_v3_model_1_seed_000 took 357.6s (30 recycles) 2024-07-11 08:48:55,033 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=53.9 pTM=0.435 ipTM=0.167 2024-07-11 08:49:01,417 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=54.7 pTM=0.422 ipTM=0.144 tol=5.24 2024-07-11 08:49:07,794 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=56.5 pTM=0.421 ipTM=0.152 tol=6.46 2024-07-11 08:49:14,176 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=55.9 pTM=0.413 ipTM=0.147 tol=4.15 2024-07-11 08:49:20,556 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=58 pTM=0.41 ipTM=0.164 tol=4.19 2024-07-11 08:49:26,939 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=58.7 pTM=0.408 ipTM=0.154 tol=2.21 2024-07-11 08:49:33,327 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=59.9 pTM=0.413 ipTM=0.182 tol=2.78 2024-07-11 08:49:39,709 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=59.1 pTM=0.41 ipTM=0.145 tol=1.82 2024-07-11 08:49:46,093 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=59.1 pTM=0.414 ipTM=0.156 tol=3.47 2024-07-11 08:49:52,474 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=59 pTM=0.419 ipTM=0.153 tol=1.89 2024-07-11 08:49:58,857 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=59 pTM=0.415 ipTM=0.154 tol=1.57 2024-07-11 08:50:05,243 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=59.2 pTM=0.415 ipTM=0.145 tol=3.91 2024-07-11 08:50:11,636 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=59 pTM=0.412 ipTM=0.143 tol=2.62 2024-07-11 08:50:18,020 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=59 pTM=0.416 ipTM=0.149 tol=1.92 2024-07-11 08:50:24,399 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=59.4 pTM=0.417 ipTM=0.165 tol=1.69 2024-07-11 08:50:30,785 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=59 pTM=0.414 ipTM=0.149 tol=1.49 2024-07-11 08:50:37,171 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=58.7 pTM=0.42 ipTM=0.153 tol=1.32 2024-07-11 08:50:43,557 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=58.6 pTM=0.415 ipTM=0.145 tol=1.63 2024-07-11 08:50:49,945 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=58.3 pTM=0.416 ipTM=0.151 tol=1.09 2024-07-11 08:50:56,328 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=58.3 pTM=0.415 ipTM=0.148 tol=0.842 2024-07-11 08:51:02,715 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=58.8 pTM=0.413 ipTM=0.152 tol=0.941 2024-07-11 08:51:09,103 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=59.1 pTM=0.413 ipTM=0.147 tol=1.17 2024-07-11 08:51:15,482 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=58.5 pTM=0.414 ipTM=0.148 tol=1.69 2024-07-11 08:51:21,876 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=58.4 pTM=0.414 ipTM=0.143 tol=1 2024-07-11 08:51:28,266 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=58.8 pTM=0.415 ipTM=0.149 tol=1.1 2024-07-11 08:51:34,652 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=58.7 pTM=0.412 ipTM=0.144 tol=1.75 2024-07-11 08:51:41,040 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=58.8 pTM=0.413 ipTM=0.145 tol=1.54 2024-07-11 08:51:47,434 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=59.5 pTM=0.412 ipTM=0.146 tol=2.88 2024-07-11 08:51:53,829 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=59.6 pTM=0.406 ipTM=0.142 tol=2.99 2024-07-11 08:52:00,219 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=58.9 pTM=0.407 ipTM=0.142 tol=3.17 2024-07-11 08:52:06,609 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=59.6 pTM=0.41 ipTM=0.155 tol=2.03 2024-07-11 08:52:06,610 alphafold2_multimer_v3_model_2_seed_000 took 198.0s (30 recycles) 2024-07-11 08:52:13,210 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=53.2 pTM=0.432 ipTM=0.136 2024-07-11 08:52:19,601 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=55 pTM=0.412 ipTM=0.14 tol=9.2 2024-07-11 08:52:25,998 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=56.1 pTM=0.414 ipTM=0.148 tol=7.03 2024-07-11 08:52:32,389 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=57.4 pTM=0.407 ipTM=0.155 tol=3.58 2024-07-11 08:52:38,785 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=57.8 pTM=0.409 ipTM=0.149 tol=4.2 2024-07-11 08:52:45,179 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=57.1 pTM=0.408 ipTM=0.136 tol=5.32 2024-07-11 08:52:51,573 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=57.4 pTM=0.404 ipTM=0.136 tol=3.57 2024-07-11 08:52:57,970 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=57.8 pTM=0.408 ipTM=0.149 tol=4.07 2024-07-11 08:53:04,361 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=57.7 pTM=0.402 ipTM=0.148 tol=3.5 2024-07-11 08:53:10,745 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=57.5 pTM=0.408 ipTM=0.136 tol=3.66 2024-07-11 08:53:17,133 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=58.7 pTM=0.407 ipTM=0.145 tol=5.7 2024-07-11 08:53:23,519 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=57 pTM=0.408 ipTM=0.151 tol=5.95 2024-07-11 08:53:29,904 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=57.5 pTM=0.405 ipTM=0.136 tol=4.45 2024-07-11 08:53:36,292 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=58.4 pTM=0.412 ipTM=0.163 tol=4.41 2024-07-11 08:53:42,678 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=58 pTM=0.41 ipTM=0.137 tol=2.67 2024-07-11 08:53:49,059 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=58.3 pTM=0.412 ipTM=0.176 tol=1.79 2024-07-11 08:53:55,440 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=58.3 pTM=0.411 ipTM=0.147 tol=2.3 2024-07-11 08:54:01,823 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=57.9 pTM=0.412 ipTM=0.159 tol=5.87 2024-07-11 08:54:08,206 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=58.8 pTM=0.408 ipTM=0.147 tol=3.42 2024-07-11 08:54:14,588 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=57.9 pTM=0.412 ipTM=0.163 tol=4.89 2024-07-11 08:54:20,974 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=57.9 pTM=0.403 ipTM=0.14 tol=4.11 2024-07-11 08:54:27,353 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=58.1 pTM=0.409 ipTM=0.154 tol=4.15 2024-07-11 08:54:33,734 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=58.5 pTM=0.406 ipTM=0.141 tol=2.93 2024-07-11 08:54:40,122 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=58.9 pTM=0.41 ipTM=0.184 tol=3.41 2024-07-11 08:54:46,507 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=58 pTM=0.407 ipTM=0.143 tol=3.39 2024-07-11 08:54:52,888 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=57.9 pTM=0.41 ipTM=0.151 tol=3.71 2024-07-11 08:54:59,269 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=58.1 pTM=0.408 ipTM=0.134 tol=3.25 2024-07-11 08:55:05,656 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=58.5 pTM=0.413 ipTM=0.144 tol=3.69 2024-07-11 08:55:12,046 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=58.5 pTM=0.402 ipTM=0.146 tol=4.21 2024-07-11 08:55:18,440 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=58.3 pTM=0.412 ipTM=0.161 tol=4.72 2024-07-11 08:55:24,823 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=57.5 pTM=0.406 ipTM=0.137 tol=5.06 2024-07-11 08:55:24,824 alphafold2_multimer_v3_model_3_seed_000 took 198.0s (30 recycles) 2024-07-11 08:55:31,424 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=51.2 pTM=0.413 ipTM=0.165 2024-07-11 08:55:37,803 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=56.4 pTM=0.471 ipTM=0.19 tol=7.83 2024-07-11 08:55:44,186 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=55.9 pTM=0.413 ipTM=0.153 tol=5.19 2024-07-11 08:55:50,563 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=57.1 pTM=0.427 ipTM=0.173 tol=3.84 2024-07-11 08:55:56,945 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=57 pTM=0.418 ipTM=0.163 tol=2.01 2024-07-11 08:56:03,319 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=56.6 pTM=0.421 ipTM=0.153 tol=2.4 2024-07-11 08:56:09,712 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=56.8 pTM=0.407 ipTM=0.153 tol=2.87 2024-07-11 08:56:16,097 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=56.7 pTM=0.41 ipTM=0.16 tol=4.41 2024-07-11 08:56:22,482 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=56.7 pTM=0.407 ipTM=0.148 tol=3.07 2024-07-11 08:56:28,863 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=56.1 pTM=0.406 ipTM=0.15 tol=3.7 2024-07-11 08:56:35,247 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=56.9 pTM=0.41 ipTM=0.151 tol=3.03 2024-07-11 08:56:41,635 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=56.5 pTM=0.403 ipTM=0.142 tol=4.41 2024-07-11 08:56:48,019 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=57.1 pTM=0.406 ipTM=0.143 tol=7.04 2024-07-11 08:56:54,413 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=56.2 pTM=0.407 ipTM=0.147 tol=3.65 2024-07-11 08:57:00,800 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=56.6 pTM=0.411 ipTM=0.152 tol=3.12 2024-07-11 08:57:07,186 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=56.3 pTM=0.406 ipTM=0.143 tol=2.78 2024-07-11 08:57:13,567 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=56.6 pTM=0.415 ipTM=0.161 tol=4.83 2024-07-11 08:57:19,955 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=56.3 pTM=0.406 ipTM=0.148 tol=3.42 2024-07-11 08:57:26,339 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=56.5 pTM=0.408 ipTM=0.156 tol=2.63 2024-07-11 08:57:32,718 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=56.5 pTM=0.409 ipTM=0.147 tol=3.24 2024-07-11 08:57:39,098 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=57.3 pTM=0.411 ipTM=0.152 tol=2.35 2024-07-11 08:57:45,483 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=56.4 pTM=0.406 ipTM=0.14 tol=2.62 2024-07-11 08:57:51,870 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=57.1 pTM=0.408 ipTM=0.145 tol=2.5 2024-07-11 08:57:58,254 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=56.2 pTM=0.406 ipTM=0.142 tol=2.8 2024-07-11 08:58:04,631 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=56.6 pTM=0.415 ipTM=0.147 tol=2.78 2024-07-11 08:58:11,019 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=57.3 pTM=0.406 ipTM=0.142 tol=3.25 2024-07-11 08:58:17,405 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=57.1 pTM=0.41 ipTM=0.143 tol=3.84 2024-07-11 08:58:23,789 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=57.1 pTM=0.41 ipTM=0.146 tol=2.55 2024-07-11 08:58:30,174 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=56.7 pTM=0.408 ipTM=0.143 tol=2.51 2024-07-11 08:58:36,559 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=58.6 pTM=0.41 ipTM=0.158 tol=5.13 2024-07-11 08:58:42,944 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=59.6 pTM=0.401 ipTM=0.182 tol=7.41 2024-07-11 08:58:42,944 alphafold2_multimer_v3_model_4_seed_000 took 197.9s (30 recycles) 2024-07-11 08:58:49,542 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=52.4 pTM=0.445 ipTM=0.178 2024-07-11 08:58:55,933 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=53.5 pTM=0.428 ipTM=0.142 tol=8.56 2024-07-11 08:59:02,318 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=54.2 pTM=0.423 ipTM=0.136 tol=6.58 2024-07-11 08:59:08,714 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=55.2 pTM=0.412 ipTM=0.134 tol=4.46 2024-07-11 08:59:15,101 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=54.8 pTM=0.419 ipTM=0.141 tol=4.02 2024-07-11 08:59:21,492 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=54.8 pTM=0.422 ipTM=0.13 tol=6.05 2024-07-11 08:59:27,885 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=54.9 pTM=0.419 ipTM=0.13 tol=3.79 2024-07-11 08:59:34,276 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=54.5 pTM=0.421 ipTM=0.135 tol=2.02 2024-07-11 08:59:40,667 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=55.1 pTM=0.421 ipTM=0.141 tol=2.62 2024-07-11 08:59:47,065 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=55 pTM=0.42 ipTM=0.136 tol=3.24 2024-07-11 08:59:53,457 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=55.9 pTM=0.425 ipTM=0.129 tol=3.56 2024-07-11 08:59:59,847 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=56.2 pTM=0.42 ipTM=0.142 tol=3.86 2024-07-11 09:00:06,240 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=55.9 pTM=0.424 ipTM=0.137 tol=2.86 2024-07-11 09:00:12,631 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=55.8 pTM=0.435 ipTM=0.142 tol=7.93 2024-07-11 09:00:19,016 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=55.6 pTM=0.423 ipTM=0.127 tol=4.46 2024-07-11 09:00:25,414 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=56.7 pTM=0.42 ipTM=0.138 tol=4.53 2024-07-11 09:00:31,803 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=57.5 pTM=0.432 ipTM=0.138 tol=7.96 2024-07-11 09:00:38,187 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=57 pTM=0.422 ipTM=0.155 tol=2.94 2024-07-11 09:00:44,571 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=58.2 pTM=0.436 ipTM=0.165 tol=4.96 2024-07-11 09:00:50,960 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=56.4 pTM=0.427 ipTM=0.172 tol=7.51 2024-07-11 09:00:57,346 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=60 pTM=0.413 ipTM=0.146 tol=7.12 2024-07-11 09:01:03,736 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=63.1 pTM=0.406 ipTM=0.148 tol=9.66 2024-07-11 09:01:10,125 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=63.1 pTM=0.421 ipTM=0.189 tol=5.4 2024-07-11 09:01:16,514 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=63 pTM=0.406 ipTM=0.135 tol=6.16 2024-07-11 09:01:22,897 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=62.1 pTM=0.413 ipTM=0.151 tol=5.92 2024-07-11 09:01:29,280 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=62.3 pTM=0.413 ipTM=0.138 tol=2.51 2024-07-11 09:01:35,671 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=63.1 pTM=0.405 ipTM=0.135 tol=3.37 2024-07-11 09:01:42,059 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=63 pTM=0.414 ipTM=0.155 tol=3.9 2024-07-11 09:01:48,443 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=63.3 pTM=0.411 ipTM=0.139 tol=3.39 2024-07-11 09:01:54,829 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=62.8 pTM=0.414 ipTM=0.144 tol=2.46 2024-07-11 09:02:01,212 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=63.8 pTM=0.433 ipTM=0.21 tol=3.2 2024-07-11 09:02:01,213 alphafold2_multimer_v3_model_5_seed_000 took 198.1s (30 recycles) 2024-07-11 09:02:01,415 reranking models by 'multimer' metric 2024-07-11 09:02:05,036 Warning: importing 'simtk.openmm' is deprecated. Import 'openmm' instead. 2024-07-11 09:02:34,003 Relaxation took 32.6s 2024-07-11 09:02:34,003 rank_001_alphafold2_multimer_v3_model_5_seed_000 pLDDT=63.8 pTM=0.433 ipTM=0.21 2024-07-11 09:03:05,461 Relaxation took 31.5s 2024-07-11 09:03:05,461 rank_002_alphafold2_multimer_v3_model_4_seed_000 pLDDT=59.6 pTM=0.401 ipTM=0.182 2024-07-11 09:03:32,637 Relaxation took 27.2s 2024-07-11 09:03:32,637 rank_003_alphafold2_multimer_v3_model_2_seed_000 pLDDT=59.6 pTM=0.41 ipTM=0.155 2024-07-11 09:03:52,517 Relaxation took 19.9s 2024-07-11 09:03:52,517 rank_004_alphafold2_multimer_v3_model_1_seed_000 pLDDT=61.4 pTM=0.4 ipTM=0.14 2024-07-11 09:04:19,341 Relaxation took 26.8s 2024-07-11 09:04:19,341 rank_005_alphafold2_multimer_v3_model_3_seed_000 pLDDT=57.5 pTM=0.406 ipTM=0.137 2024-07-11 09:04:20,405 Done