2024-07-11 09:23:48,977 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3) 2024-07-11 09:23:49,296 Running on GPU 2024-07-11 09:23:52,998 Found 6 citations for tools or databases 2024-07-11 09:23:52,998 Query 1/1: MIRO2_APC4 (length 1426) 2024-07-11 09:23:53,453 Sleeping for 10s. Reason: PENDING 2024-07-11 09:24:03,878 Sleeping for 10s. Reason: RUNNING 2024-07-11 09:24:14,296 Sleeping for 6s. Reason: RUNNING 2024-07-11 09:24:20,702 Sleeping for 7s. Reason: RUNNING 2024-07-11 09:24:28,103 Sleeping for 10s. Reason: RUNNING 2024-07-11 09:24:38,532 Sleeping for 10s. Reason: RUNNING 2024-07-11 09:24:48,954 Sleeping for 7s. Reason: RUNNING 2024-07-11 09:24:56,357 Sleeping for 5s. Reason: RUNNING 2024-07-11 09:25:01,771 Sleeping for 6s. Reason: RUNNING 2024-07-11 09:25:08,177 Sleeping for 6s. Reason: RUNNING 2024-07-11 09:25:14,584 Sleeping for 8s. Reason: RUNNING 2024-07-11 09:25:23,009 Sleeping for 7s. Reason: RUNNING 2024-07-11 09:25:30,424 Sleeping for 9s. Reason: RUNNING 2024-07-11 09:25:39,833 Sleeping for 10s. Reason: RUNNING 2024-07-11 09:25:50,258 Sleeping for 8s. Reason: RUNNING 2024-07-11 09:25:58,670 Sleeping for 7s. Reason: RUNNING 2024-07-11 09:26:06,091 Sleeping for 6s. Reason: RUNNING 2024-07-11 09:26:12,490 Sleeping for 9s. Reason: RUNNING 2024-07-11 09:26:21,894 Sleeping for 9s. Reason: RUNNING 2024-07-11 09:26:31,312 Sleeping for 10s. Reason: RUNNING 2024-07-11 09:26:43,321 Sleeping for 5s. Reason: PENDING 2024-07-11 09:26:48,728 Sleeping for 10s. Reason: RUNNING 2024-07-11 09:26:59,135 Sleeping for 5s. Reason: RUNNING 2024-07-11 09:27:04,536 Sleeping for 5s. Reason: RUNNING 2024-07-11 09:27:09,951 Sleeping for 6s. Reason: RUNNING 2024-07-11 09:27:16,373 Sleeping for 6s. Reason: RUNNING 2024-07-11 09:27:22,801 Sleeping for 9s. Reason: RUNNING 2024-07-11 09:27:32,227 Sleeping for 8s. Reason: RUNNING 2024-07-11 09:27:40,641 Sleeping for 9s. Reason: RUNNING 2024-07-11 09:27:50,059 Sleeping for 7s. Reason: RUNNING 2024-07-11 09:27:57,481 Sleeping for 7s. Reason: RUNNING 2024-07-11 09:28:04,884 Sleeping for 6s. Reason: RUNNING 2024-07-11 09:28:14,304 Setting max_seq=508, max_extra_seq=2048 2024-07-11 09:31:46,226 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=74.9 pTM=0.518 ipTM=0.166 2024-07-11 09:32:42,365 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=75.8 pTM=0.519 ipTM=0.193 tol=4.82 2024-07-11 09:33:38,599 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=75.7 pTM=0.519 ipTM=0.195 tol=1.82 2024-07-11 09:34:34,845 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=76.3 pTM=0.52 ipTM=0.196 tol=1.49 2024-07-11 09:35:31,158 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=76.4 pTM=0.515 ipTM=0.195 tol=2.6 2024-07-11 09:36:27,483 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=76.7 pTM=0.516 ipTM=0.194 tol=1.15 2024-07-11 09:37:23,839 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=76.6 pTM=0.515 ipTM=0.192 tol=2.28 2024-07-11 09:38:20,204 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=76.8 pTM=0.514 ipTM=0.184 tol=1.86 2024-07-11 09:39:16,604 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=77 pTM=0.513 ipTM=0.188 tol=2.54 2024-07-11 09:40:13,008 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=77.2 pTM=0.513 ipTM=0.182 tol=1.87 2024-07-11 09:41:09,420 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=77.1 pTM=0.513 ipTM=0.184 tol=3.82 2024-07-11 09:42:05,835 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=77.1 pTM=0.513 ipTM=0.175 tol=3.51 2024-07-11 09:43:02,215 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=77.1 pTM=0.513 ipTM=0.188 tol=2.09 2024-07-11 09:43:58,616 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=77.4 pTM=0.514 ipTM=0.171 tol=2.44 2024-07-11 09:44:55,006 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=77.2 pTM=0.512 ipTM=0.172 tol=1.21 2024-07-11 09:45:51,429 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=77.1 pTM=0.512 ipTM=0.166 tol=3.63 2024-07-11 09:46:47,903 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=77.2 pTM=0.511 ipTM=0.169 tol=3.54 2024-07-11 09:47:44,366 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=77.3 pTM=0.514 ipTM=0.166 tol=2.16 2024-07-11 09:48:40,798 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=77.5 pTM=0.514 ipTM=0.169 tol=1.95 2024-07-11 09:49:37,209 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=77.4 pTM=0.514 ipTM=0.169 tol=4.47 2024-07-11 09:50:33,608 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=77.2 pTM=0.513 ipTM=0.168 tol=3.02 2024-07-11 09:51:30,006 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=77.2 pTM=0.512 ipTM=0.169 tol=2.98 2024-07-11 09:52:26,414 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=77.2 pTM=0.512 ipTM=0.169 tol=1.07 2024-07-11 09:53:22,770 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=77.1 pTM=0.514 ipTM=0.168 tol=2.76 2024-07-11 09:54:19,179 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=76.9 pTM=0.51 ipTM=0.172 tol=2.12 2024-07-11 09:55:15,560 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=77.1 pTM=0.514 ipTM=0.17 tol=2.24 2024-07-11 09:56:11,925 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=77.2 pTM=0.513 ipTM=0.169 tol=4.27 2024-07-11 09:57:08,274 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=76.9 pTM=0.511 ipTM=0.168 tol=2.45 2024-07-11 09:58:04,626 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=77.1 pTM=0.512 ipTM=0.167 tol=1.28 2024-07-11 09:59:00,976 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=77.4 pTM=0.515 ipTM=0.168 tol=2.5 2024-07-11 09:59:57,335 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=77.4 pTM=0.513 ipTM=0.168 tol=3.09 2024-07-11 09:59:57,336 alphafold2_multimer_v3_model_1_seed_000 took 1897.9s (30 recycles) 2024-07-11 10:00:54,883 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=74.9 pTM=0.521 ipTM=0.171 2024-07-11 10:01:51,300 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=76.1 pTM=0.511 ipTM=0.174 tol=4.04 2024-07-11 10:02:47,768 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=77.1 pTM=0.511 ipTM=0.213 tol=4.68 2024-07-11 10:03:44,246 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=77.8 pTM=0.51 ipTM=0.193 tol=3.84 2024-07-11 10:04:40,760 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=77.8 pTM=0.511 ipTM=0.164 tol=2.05 2024-07-11 10:05:37,308 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=78.1 pTM=0.513 ipTM=0.158 tol=1.31 2024-07-11 10:06:33,890 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=78 pTM=0.513 ipTM=0.161 tol=0.855 2024-07-11 10:07:30,460 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=77.9 pTM=0.515 ipTM=0.163 tol=1.02 2024-07-11 10:08:26,969 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=78.2 pTM=0.514 ipTM=0.162 tol=1.97 2024-07-11 10:09:23,513 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=78.3 pTM=0.514 ipTM=0.165 tol=1.39 2024-07-11 10:10:20,040 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=78.4 pTM=0.515 ipTM=0.171 tol=0.871 2024-07-11 10:11:16,561 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=78.2 pTM=0.514 ipTM=0.174 tol=1.17 2024-07-11 10:12:13,062 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=78.1 pTM=0.513 ipTM=0.172 tol=0.789 2024-07-11 10:13:09,584 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=78.2 pTM=0.515 ipTM=0.17 tol=1.25 2024-07-11 10:14:06,123 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=78.1 pTM=0.512 ipTM=0.176 tol=0.608 2024-07-11 10:15:02,659 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=78.2 pTM=0.515 ipTM=0.168 tol=0.96 2024-07-11 10:15:59,182 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=78.1 pTM=0.513 ipTM=0.161 tol=1 2024-07-11 10:16:55,725 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=78.2 pTM=0.515 ipTM=0.157 tol=3.11 2024-07-11 10:17:52,229 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=78.2 pTM=0.514 ipTM=0.158 tol=2.29 2024-07-11 10:18:48,715 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=78.2 pTM=0.514 ipTM=0.157 tol=2.15 2024-07-11 10:19:45,220 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=78.1 pTM=0.514 ipTM=0.158 tol=1.81 2024-07-11 10:20:41,737 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=78.1 pTM=0.512 ipTM=0.162 tol=2 2024-07-11 10:21:38,259 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=78.1 pTM=0.512 ipTM=0.159 tol=1.15 2024-07-11 10:22:34,770 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=78.3 pTM=0.515 ipTM=0.156 tol=1.42 2024-07-11 10:23:31,306 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=77.9 pTM=0.512 ipTM=0.158 tol=1.67 2024-07-11 10:24:27,845 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=78 pTM=0.512 ipTM=0.16 tol=1.02 2024-07-11 10:25:24,402 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=77.9 pTM=0.513 ipTM=0.163 tol=1.02 2024-07-11 10:26:20,939 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=77.8 pTM=0.51 ipTM=0.161 tol=0.571 2024-07-11 10:27:17,482 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=77.8 pTM=0.513 ipTM=0.158 tol=0.983 2024-07-11 10:28:14,020 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=78.2 pTM=0.514 ipTM=0.158 tol=0.994 2024-07-11 10:29:10,565 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=78.1 pTM=0.513 ipTM=0.158 tol=1.17 2024-07-11 10:29:10,566 alphafold2_multimer_v3_model_2_seed_000 took 1752.0s (30 recycles) 2024-07-11 10:30:08,207 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=74.7 pTM=0.52 ipTM=0.163 2024-07-11 10:31:04,650 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=74.5 pTM=0.512 ipTM=0.163 tol=5.77 2024-07-11 10:32:01,120 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=74.9 pTM=0.516 ipTM=0.159 tol=6.38 2024-07-11 10:32:57,634 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=75.3 pTM=0.51 ipTM=0.151 tol=13.4 2024-07-11 10:33:54,161 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=75.5 pTM=0.512 ipTM=0.155 tol=7.14 2024-07-11 10:34:50,642 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=75.6 pTM=0.512 ipTM=0.152 tol=12.6 2024-07-11 10:35:47,163 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=75.8 pTM=0.513 ipTM=0.157 tol=11.8 2024-07-11 10:36:43,701 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=75.6 pTM=0.511 ipTM=0.151 tol=12.1 2024-07-11 10:37:40,217 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=76 pTM=0.514 ipTM=0.151 tol=12.7 2024-07-11 10:38:36,726 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=75.9 pTM=0.511 ipTM=0.152 tol=9.47 2024-07-11 10:39:33,244 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=75.9 pTM=0.514 ipTM=0.156 tol=10.8 2024-07-11 10:40:29,756 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=76 pTM=0.511 ipTM=0.158 tol=9.77 2024-07-11 10:41:26,284 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=76 pTM=0.514 ipTM=0.159 tol=10.4 2024-07-11 10:42:22,816 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=75.7 pTM=0.509 ipTM=0.153 tol=12.5 2024-07-11 10:43:19,329 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=75.8 pTM=0.512 ipTM=0.163 tol=10.4 2024-07-11 10:44:15,876 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=75.8 pTM=0.51 ipTM=0.152 tol=12.5 2024-07-11 10:45:12,406 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=75.8 pTM=0.513 ipTM=0.152 tol=15 2024-07-11 10:46:08,920 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=76.1 pTM=0.513 ipTM=0.153 tol=6.69 2024-07-11 10:47:05,434 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=75.9 pTM=0.514 ipTM=0.156 tol=5.3 2024-07-11 10:48:01,941 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=75.8 pTM=0.51 ipTM=0.154 tol=12.6 2024-07-11 10:48:58,452 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=75.8 pTM=0.513 ipTM=0.162 tol=12.4 2024-07-11 10:49:54,994 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=75.7 pTM=0.509 ipTM=0.156 tol=12.9 2024-07-11 10:50:51,534 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=75.9 pTM=0.512 ipTM=0.157 tol=11.7 2024-07-11 10:51:48,075 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=75.8 pTM=0.511 ipTM=0.154 tol=14.9 2024-07-11 10:52:44,606 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=76 pTM=0.513 ipTM=0.154 tol=16.9 2024-07-11 10:53:41,149 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=75.9 pTM=0.512 ipTM=0.154 tol=4.62 2024-07-11 10:54:37,690 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=75.4 pTM=0.515 ipTM=0.161 tol=4.62 2024-07-11 10:55:34,197 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=75.4 pTM=0.51 ipTM=0.154 tol=8.88 2024-07-11 10:56:30,760 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=75.6 pTM=0.512 ipTM=0.162 tol=5.79 2024-07-11 10:57:27,315 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=75.8 pTM=0.511 ipTM=0.152 tol=9.27 2024-07-11 10:58:23,863 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=75.9 pTM=0.512 ipTM=0.151 tol=11.6 2024-07-11 10:58:23,865 alphafold2_multimer_v3_model_3_seed_000 took 1752.1s (30 recycles) 2024-07-11 10:59:21,441 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=74.6 pTM=0.521 ipTM=0.181 2024-07-11 11:00:17,886 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=75.8 pTM=0.519 ipTM=0.173 tol=14.1 2024-07-11 11:01:14,339 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=76.4 pTM=0.518 ipTM=0.21 tol=6.95 2024-07-11 11:02:10,794 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=76.4 pTM=0.517 ipTM=0.203 tol=4.57 2024-07-11 11:03:07,249 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=76.2 pTM=0.515 ipTM=0.186 tol=1.73 2024-07-11 11:04:03,696 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=76.6 pTM=0.517 ipTM=0.184 tol=4.07 2024-07-11 11:05:00,134 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=76.7 pTM=0.52 ipTM=0.197 tol=6.15 2024-07-11 11:05:56,578 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=76.4 pTM=0.516 ipTM=0.182 tol=4.42 2024-07-11 11:06:53,019 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=76.9 pTM=0.52 ipTM=0.194 tol=3.22 2024-07-11 11:07:49,428 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=76.9 pTM=0.518 ipTM=0.193 tol=2.35 2024-07-11 11:08:45,848 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=76.8 pTM=0.519 ipTM=0.211 tol=2.54 2024-07-11 11:09:42,254 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=76.6 pTM=0.518 ipTM=0.204 tol=4.25 2024-07-11 11:10:38,682 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=76.4 pTM=0.516 ipTM=0.206 tol=4.17 2024-07-11 11:11:35,074 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=76.7 pTM=0.516 ipTM=0.2 tol=3.18 2024-07-11 11:12:31,479 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=76.8 pTM=0.516 ipTM=0.209 tol=4.62 2024-07-11 11:13:27,873 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=76.6 pTM=0.516 ipTM=0.202 tol=5.02 2024-07-11 11:14:24,297 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=76.6 pTM=0.516 ipTM=0.205 tol=2.61 2024-07-11 11:15:20,689 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=76.8 pTM=0.519 ipTM=0.212 tol=1.78 2024-07-11 11:16:17,104 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=76.9 pTM=0.519 ipTM=0.217 tol=5.42 2024-07-11 11:17:13,530 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=76.8 pTM=0.516 ipTM=0.195 tol=5.74 2024-07-11 11:18:09,984 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=76.4 pTM=0.517 ipTM=0.211 tol=2.3 2024-07-11 11:19:06,401 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=76.7 pTM=0.517 ipTM=0.207 tol=2 2024-07-11 11:20:02,836 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=76.6 pTM=0.517 ipTM=0.192 tol=3.83 2024-07-11 11:20:59,269 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=76.5 pTM=0.517 ipTM=0.197 tol=4.83 2024-07-11 11:21:55,690 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=76.7 pTM=0.518 ipTM=0.199 tol=3.54 2024-07-11 11:22:52,099 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=76.7 pTM=0.517 ipTM=0.199 tol=2.83 2024-07-11 11:23:48,480 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=76.6 pTM=0.518 ipTM=0.219 tol=3.22 2024-07-11 11:24:44,871 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=76.4 pTM=0.515 ipTM=0.203 tol=1.76 2024-07-11 11:25:41,264 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=76.4 pTM=0.517 ipTM=0.201 tol=1.57 2024-07-11 11:26:37,656 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=76.7 pTM=0.517 ipTM=0.198 tol=4.35 2024-07-11 11:27:34,063 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=76.8 pTM=0.518 ipTM=0.202 tol=4.03 2024-07-11 11:27:34,064 alphafold2_multimer_v3_model_4_seed_000 took 1749.0s (30 recycles) 2024-07-11 11:28:31,631 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=74.1 pTM=0.522 ipTM=0.195 2024-07-11 11:29:28,088 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=74.8 pTM=0.515 ipTM=0.165 tol=4.6 2024-07-11 11:30:24,594 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=75 pTM=0.507 ipTM=0.153 tol=14.4 2024-07-11 11:31:21,047 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=75.6 pTM=0.512 ipTM=0.173 tol=7.87 2024-07-11 11:32:17,547 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=75.4 pTM=0.508 ipTM=0.166 tol=14.2 2024-07-11 11:33:14,020 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=75.8 pTM=0.51 ipTM=0.163 tol=9.88 2024-07-11 11:34:10,514 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=75.9 pTM=0.511 ipTM=0.157 tol=4.47 2024-07-11 11:35:06,968 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=75.8 pTM=0.513 ipTM=0.152 tol=5.22 2024-07-11 11:36:03,450 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=76.2 pTM=0.516 ipTM=0.151 tol=1.84 2024-07-11 11:36:59,924 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=76 pTM=0.512 ipTM=0.15 tol=2.79 2024-07-11 11:37:56,441 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=76 pTM=0.514 ipTM=0.15 tol=2.28 2024-07-11 11:38:52,955 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=76.1 pTM=0.512 ipTM=0.15 tol=1.74 2024-07-11 11:39:49,454 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=75.9 pTM=0.515 ipTM=0.151 tol=3.12 2024-07-11 11:40:45,962 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=75.9 pTM=0.513 ipTM=0.15 tol=1.81 2024-07-11 11:41:42,462 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=76 pTM=0.514 ipTM=0.15 tol=0.888 2024-07-11 11:42:39,015 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=76 pTM=0.513 ipTM=0.149 tol=2.76 2024-07-11 11:43:35,558 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=76 pTM=0.515 ipTM=0.15 tol=2.55 2024-07-11 11:44:32,080 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=76.2 pTM=0.515 ipTM=0.15 tol=7.27 2024-07-11 11:45:28,576 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=76.1 pTM=0.514 ipTM=0.15 tol=2.69 2024-07-11 11:46:25,080 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=76.1 pTM=0.514 ipTM=0.15 tol=1.87 2024-07-11 11:47:21,603 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=75.8 pTM=0.513 ipTM=0.15 tol=1.53 2024-07-11 11:48:18,130 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=75.9 pTM=0.511 ipTM=0.15 tol=2.03 2024-07-11 11:49:14,654 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=76 pTM=0.514 ipTM=0.151 tol=2.05 2024-07-11 11:50:11,182 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=76 pTM=0.512 ipTM=0.15 tol=2.9 2024-07-11 11:51:07,699 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=76 pTM=0.514 ipTM=0.15 tol=1.21 2024-07-11 11:52:04,222 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=76 pTM=0.513 ipTM=0.15 tol=1.33 2024-07-11 11:53:00,737 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=75.9 pTM=0.514 ipTM=0.151 tol=1.16 2024-07-11 11:53:57,242 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=75.7 pTM=0.513 ipTM=0.153 tol=2.55 2024-07-11 11:54:53,754 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=75.8 pTM=0.512 ipTM=0.153 tol=4.73 2024-07-11 11:55:50,250 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=76 pTM=0.513 ipTM=0.151 tol=2.99 2024-07-11 11:56:46,733 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=76.1 pTM=0.513 ipTM=0.15 tol=1.16 2024-07-11 11:56:46,734 alphafold2_multimer_v3_model_5_seed_000 took 1751.5s (30 recycles) 2024-07-11 11:56:47,927 reranking models by 'multimer' metric 2024-07-11 11:56:51,599 Warning: importing 'simtk.openmm' is deprecated. Import 'openmm' instead. 2024-07-11 11:58:53,146 Relaxation took 125.2s 2024-07-11 11:58:53,147 rank_001_alphafold2_multimer_v3_model_4_seed_000 pLDDT=76.8 pTM=0.518 ipTM=0.202 2024-07-11 12:00:11,436 Relaxation took 78.3s 2024-07-11 12:00:11,436 rank_002_alphafold2_multimer_v3_model_1_seed_000 pLDDT=77.4 pTM=0.513 ipTM=0.168 2024-07-11 12:02:33,169 Relaxation took 141.7s 2024-07-11 12:02:33,169 rank_003_alphafold2_multimer_v3_model_2_seed_000 pLDDT=78.1 pTM=0.513 ipTM=0.158 2024-07-11 12:04:49,033 Relaxation took 135.9s 2024-07-11 12:04:49,034 rank_004_alphafold2_multimer_v3_model_3_seed_000 pLDDT=75.9 pTM=0.512 ipTM=0.151 2024-07-11 12:07:49,443 Relaxation took 180.4s 2024-07-11 12:07:49,443 rank_005_alphafold2_multimer_v3_model_5_seed_000 pLDDT=76.1 pTM=0.513 ipTM=0.15 2024-07-11 12:07:52,451 Done