2024-07-11 09:29:18,537 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3)
2024-07-11 09:29:18,874 Running on GPU
2024-07-11 09:29:22,638 Found 6 citations for tools or databases
2024-07-11 09:29:22,638 Query 1/1: MK04_POTEA (length 1085)
2024-07-11 09:29:23,088 Sleeping for 5s. Reason: PENDING
2024-07-11 09:29:28,498 Sleeping for 8s. Reason: RUNNING
2024-07-11 09:29:36,921 Sleeping for 8s. Reason: RUNNING
2024-07-11 09:29:45,346 Sleeping for 6s. Reason: RUNNING
2024-07-11 09:29:51,763 Sleeping for 8s. Reason: RUNNING
2024-07-11 09:30:00,165 Sleeping for 9s. Reason: RUNNING
2024-07-11 09:30:09,577 Sleeping for 5s. Reason: RUNNING
2024-07-11 09:30:14,982 Sleeping for 10s. Reason: RUNNING
2024-07-11 09:30:25,404 Sleeping for 8s. Reason: RUNNING
2024-07-11 09:30:33,812 Sleeping for 10s. Reason: RUNNING
2024-07-11 09:30:44,239 Sleeping for 8s. Reason: RUNNING
2024-07-11 09:30:52,644 Sleeping for 6s. Reason: RUNNING
2024-07-11 09:30:59,040 Sleeping for 7s. Reason: RUNNING
2024-07-11 09:31:06,452 Sleeping for 9s. Reason: RUNNING
2024-07-11 09:31:15,860 Sleeping for 9s. Reason: RUNNING
2024-07-11 09:31:25,266 Sleeping for 10s. Reason: RUNNING
2024-07-11 09:31:35,669 Sleeping for 7s. Reason: RUNNING
2024-07-11 09:31:43,076 Sleeping for 6s. Reason: RUNNING
2024-07-11 09:31:49,485 Sleeping for 7s. Reason: RUNNING
2024-07-11 09:31:56,885 Sleeping for 8s. Reason: RUNNING
2024-07-11 09:32:05,298 Sleeping for 7s. Reason: RUNNING
2024-07-11 09:32:12,715 Sleeping for 8s. Reason: RUNNING
2024-07-11 09:32:21,125 Sleeping for 6s. Reason: RUNNING
2024-07-11 09:32:27,517 Sleeping for 6s. Reason: RUNNING
2024-07-11 09:32:33,938 Sleeping for 9s. Reason: RUNNING
2024-07-11 09:32:45,170 Sleeping for 10s. Reason: PENDING
2024-07-11 09:32:55,597 Sleeping for 9s. Reason: RUNNING
2024-07-11 09:33:05,011 Sleeping for 7s. Reason: RUNNING
2024-07-11 09:33:12,415 Sleeping for 7s. Reason: RUNNING
2024-07-11 09:33:19,829 Sleeping for 7s. Reason: RUNNING
2024-07-11 09:33:27,224 Sleeping for 7s. Reason: RUNNING
2024-07-11 09:33:34,625 Sleeping for 9s. Reason: RUNNING
2024-07-11 09:33:44,032 Sleeping for 8s. Reason: RUNNING
2024-07-11 09:33:52,437 Sleeping for 5s. Reason: RUNNING
2024-07-11 09:33:57,853 Sleeping for 10s. Reason: RUNNING
2024-07-11 09:34:08,256 Sleeping for 8s. Reason: RUNNING
2024-07-11 09:34:16,678 Sleeping for 9s. Reason: RUNNING
2024-07-11 09:34:26,091 Sleeping for 7s. Reason: RUNNING
2024-07-11 09:34:33,501 Sleeping for 6s. Reason: RUNNING
2024-07-11 09:34:39,909 Sleeping for 7s. Reason: RUNNING
2024-07-11 09:34:47,317 Sleeping for 8s. Reason: RUNNING
2024-07-11 09:34:59,937 Setting max_seq=508, max_extra_seq=2048
2024-07-11 09:38:14,155 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=51.8 pTM=0.393 ipTM=0.162
2024-07-11 09:38:39,964 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=53.3 pTM=0.451 ipTM=0.272 tol=15.3
2024-07-11 09:39:05,938 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=53 pTM=0.393 ipTM=0.149 tol=10.5
2024-07-11 09:39:32,002 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=52.9 pTM=0.388 ipTM=0.151 tol=10.7
2024-07-11 09:39:58,046 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=52.5 pTM=0.388 ipTM=0.152 tol=7
2024-07-11 09:40:24,134 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=52.5 pTM=0.388 ipTM=0.158 tol=8.72
2024-07-11 09:40:50,242 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=52.4 pTM=0.387 ipTM=0.167 tol=12.9
2024-07-11 09:41:16,331 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=52.4 pTM=0.388 ipTM=0.175 tol=8.78
2024-07-11 09:41:42,435 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=52.5 pTM=0.389 ipTM=0.179 tol=5.65
2024-07-11 09:42:08,554 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=52.7 pTM=0.387 ipTM=0.179 tol=5.14
2024-07-11 09:42:34,692 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=52.5 pTM=0.388 ipTM=0.18 tol=6.23
2024-07-11 09:43:00,821 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=52.6 pTM=0.39 ipTM=0.185 tol=9.16
2024-07-11 09:43:26,943 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=52.7 pTM=0.391 ipTM=0.187 tol=4.84
2024-07-11 09:43:53,044 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=52.7 pTM=0.39 ipTM=0.186 tol=4.62
2024-07-11 09:44:19,119 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=52.6 pTM=0.389 ipTM=0.188 tol=5.38
2024-07-11 09:44:45,210 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=52.8 pTM=0.392 ipTM=0.189 tol=2.57
2024-07-11 09:45:11,301 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=52.6 pTM=0.392 ipTM=0.192 tol=3.7
2024-07-11 09:45:37,417 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=52.7 pTM=0.391 ipTM=0.182 tol=2.42
2024-07-11 09:46:03,518 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=52.9 pTM=0.397 ipTM=0.206 tol=2.13
2024-07-11 09:46:29,619 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=53.2 pTM=0.398 ipTM=0.204 tol=1.76
2024-07-11 09:46:55,709 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=52.8 pTM=0.397 ipTM=0.203 tol=1.66
2024-07-11 09:47:21,797 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=53.2 pTM=0.401 ipTM=0.207 tol=1.51
2024-07-11 09:47:47,932 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=52.9 pTM=0.398 ipTM=0.201 tol=6.12
2024-07-11 09:48:14,028 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=53.4 pTM=0.405 ipTM=0.208 tol=5.34
2024-07-11 09:48:40,130 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=52.8 pTM=0.396 ipTM=0.19 tol=2.61
2024-07-11 09:49:06,208 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=52.6 pTM=0.392 ipTM=0.184 tol=2.33
2024-07-11 09:49:32,278 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=52.6 pTM=0.398 ipTM=0.202 tol=1.53
2024-07-11 09:49:58,361 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=53.2 pTM=0.402 ipTM=0.205 tol=1.97
2024-07-11 09:50:24,461 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=52.7 pTM=0.395 ipTM=0.189 tol=2.11
2024-07-11 09:50:50,558 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=52.6 pTM=0.391 ipTM=0.185 tol=1.78
2024-07-11 09:51:16,662 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=52.7 pTM=0.394 ipTM=0.186 tol=1.88
2024-07-11 09:51:16,663 alphafold2_multimer_v3_model_1_seed_000 took 971.7s (30 recycles)
2024-07-11 09:51:43,546 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=52.6 pTM=0.409 ipTM=0.205
2024-07-11 09:52:09,791 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=53.6 pTM=0.394 ipTM=0.197 tol=15.9
2024-07-11 09:52:36,037 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=53.8 pTM=0.387 ipTM=0.172 tol=8.71
2024-07-11 09:53:02,285 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=53.6 pTM=0.387 ipTM=0.172 tol=7.7
2024-07-11 09:53:28,504 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=53.4 pTM=0.387 ipTM=0.177 tol=7.49
2024-07-11 09:53:54,754 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=53.6 pTM=0.386 ipTM=0.17 tol=5.21
2024-07-11 09:54:21,005 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=53.5 pTM=0.386 ipTM=0.174 tol=7.11
2024-07-11 09:54:47,270 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=53.8 pTM=0.387 ipTM=0.176 tol=2.93
2024-07-11 09:55:13,535 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=53.5 pTM=0.387 ipTM=0.176 tol=2.41
2024-07-11 09:55:39,774 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=53.7 pTM=0.387 ipTM=0.179 tol=3.72
2024-07-11 09:56:06,034 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=53.6 pTM=0.389 ipTM=0.177 tol=2.03
2024-07-11 09:56:32,275 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=53.4 pTM=0.386 ipTM=0.177 tol=3
2024-07-11 09:56:58,546 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=53.6 pTM=0.389 ipTM=0.177 tol=2.29
2024-07-11 09:57:24,784 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=53.5 pTM=0.387 ipTM=0.179 tol=3.66
2024-07-11 09:57:51,034 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=53.5 pTM=0.387 ipTM=0.177 tol=2.31
2024-07-11 09:58:17,276 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=53.2 pTM=0.386 ipTM=0.178 tol=2.65
2024-07-11 09:58:43,542 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=53.5 pTM=0.388 ipTM=0.179 tol=2.76
2024-07-11 09:59:09,808 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=53.4 pTM=0.387 ipTM=0.178 tol=3.87
2024-07-11 09:59:36,068 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=53.6 pTM=0.388 ipTM=0.18 tol=3.91
2024-07-11 10:00:02,317 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=53.2 pTM=0.387 ipTM=0.179 tol=3.89
2024-07-11 10:00:28,563 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=53.4 pTM=0.388 ipTM=0.18 tol=3.4
2024-07-11 10:00:54,816 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=53.2 pTM=0.388 ipTM=0.179 tol=1.91
2024-07-11 10:01:21,074 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=53.2 pTM=0.387 ipTM=0.181 tol=2.45
2024-07-11 10:01:47,340 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=53.2 pTM=0.387 ipTM=0.179 tol=3.51
2024-07-11 10:02:13,603 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=53.1 pTM=0.387 ipTM=0.18 tol=3.69
2024-07-11 10:02:39,851 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=53 pTM=0.387 ipTM=0.178 tol=3.72
2024-07-11 10:03:06,086 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=53.3 pTM=0.388 ipTM=0.181 tol=3.81
2024-07-11 10:03:32,331 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=53 pTM=0.387 ipTM=0.177 tol=2.13
2024-07-11 10:03:58,576 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=53.2 pTM=0.388 ipTM=0.182 tol=3.56
2024-07-11 10:04:24,831 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=53 pTM=0.386 ipTM=0.178 tol=1.69
2024-07-11 10:04:51,086 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=53.2 pTM=0.388 ipTM=0.179 tol=3.06
2024-07-11 10:04:51,087 alphafold2_multimer_v3_model_2_seed_000 took 813.7s (30 recycles)
2024-07-11 10:05:18,091 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=53.7 pTM=0.422 ipTM=0.218
2024-07-11 10:05:44,479 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=54 pTM=0.409 ipTM=0.227 tol=14.2
2024-07-11 10:06:10,872 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=53.7 pTM=0.4 ipTM=0.207 tol=8.51
2024-07-11 10:06:37,244 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=54.2 pTM=0.414 ipTM=0.245 tol=6.75
2024-07-11 10:07:03,601 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=53.7 pTM=0.401 ipTM=0.208 tol=5.55
2024-07-11 10:07:29,960 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=53.8 pTM=0.414 ipTM=0.256 tol=3.69
2024-07-11 10:07:56,302 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=54.1 pTM=0.42 ipTM=0.267 tol=4.28
2024-07-11 10:08:22,684 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=53.3 pTM=0.399 ipTM=0.209 tol=2.9
2024-07-11 10:08:49,086 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=52.9 pTM=0.396 ipTM=0.199 tol=3.41
2024-07-11 10:09:15,441 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=53.1 pTM=0.406 ipTM=0.23 tol=2.32
2024-07-11 10:09:41,796 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=53.2 pTM=0.4 ipTM=0.209 tol=1.94
2024-07-11 10:10:08,140 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=53.2 pTM=0.413 ipTM=0.253 tol=2.23
2024-07-11 10:10:34,486 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=54 pTM=0.439 ipTM=0.323 tol=3.92
2024-07-11 10:11:00,819 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=53.6 pTM=0.42 ipTM=0.268 tol=3.52
2024-07-11 10:11:27,157 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=53 pTM=0.406 ipTM=0.233 tol=3.83
2024-07-11 10:11:53,496 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=52.8 pTM=0.399 ipTM=0.209 tol=3.91
2024-07-11 10:12:19,853 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=52.9 pTM=0.404 ipTM=0.222 tol=4.2
2024-07-11 10:12:46,217 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=53.4 pTM=0.41 ipTM=0.232 tol=3.87
2024-07-11 10:13:12,548 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=53.3 pTM=0.411 ipTM=0.238 tol=2.88
2024-07-11 10:13:38,902 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=52.8 pTM=0.396 ipTM=0.2 tol=2.53
2024-07-11 10:14:05,269 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=53 pTM=0.399 ipTM=0.206 tol=1.48
2024-07-11 10:14:31,618 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=52.9 pTM=0.399 ipTM=0.204 tol=1.68
2024-07-11 10:14:57,972 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=53.3 pTM=0.41 ipTM=0.222 tol=1.78
2024-07-11 10:15:24,302 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=53.3 pTM=0.422 ipTM=0.268 tol=5.03
2024-07-11 10:15:50,645 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=52.9 pTM=0.403 ipTM=0.211 tol=4.67
2024-07-11 10:16:16,987 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=53.2 pTM=0.425 ipTM=0.284 tol=3.04
2024-07-11 10:16:43,272 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=54.7 pTM=0.5 ipTM=0.459 tol=3.57
2024-07-11 10:17:09,562 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=54.6 pTM=0.489 ipTM=0.437 tol=1.84
2024-07-11 10:17:35,859 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=53.8 pTM=0.446 ipTM=0.335 tol=2
2024-07-11 10:18:02,158 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=53.2 pTM=0.424 ipTM=0.28 tol=1.75
2024-07-11 10:18:28,466 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=52.9 pTM=0.411 ipTM=0.244 tol=1.58
2024-07-11 10:18:28,467 alphafold2_multimer_v3_model_3_seed_000 took 816.6s (30 recycles)
2024-07-11 10:18:55,489 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=52.1 pTM=0.399 ipTM=0.162
2024-07-11 10:19:21,815 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=53.2 pTM=0.392 ipTM=0.155 tol=15
2024-07-11 10:19:48,181 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=53.2 pTM=0.393 ipTM=0.15 tol=8.11
2024-07-11 10:20:14,540 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=53.1 pTM=0.389 ipTM=0.15 tol=5.85
2024-07-11 10:20:40,928 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=52.7 pTM=0.385 ipTM=0.142 tol=6.82
2024-07-11 10:21:07,262 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=52.4 pTM=0.384 ipTM=0.141 tol=5.27
2024-07-11 10:21:33,609 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=52.3 pTM=0.382 ipTM=0.143 tol=5.29
2024-07-11 10:21:59,900 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=52.1 pTM=0.384 ipTM=0.146 tol=5.52
2024-07-11 10:22:26,197 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=52.2 pTM=0.384 ipTM=0.147 tol=3.47
2024-07-11 10:22:52,492 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=51.9 pTM=0.385 ipTM=0.148 tol=4.12
2024-07-11 10:23:18,790 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=52.4 pTM=0.388 ipTM=0.148 tol=4.91
2024-07-11 10:23:45,066 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=52 pTM=0.389 ipTM=0.148 tol=4.24
2024-07-11 10:24:11,344 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=52.5 pTM=0.391 ipTM=0.147 tol=3.51
2024-07-11 10:24:37,638 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=52 pTM=0.387 ipTM=0.142 tol=4.05
2024-07-11 10:25:03,914 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=52.2 pTM=0.387 ipTM=0.148 tol=5.16
2024-07-11 10:25:30,196 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=51.9 pTM=0.391 ipTM=0.15 tol=3.79
2024-07-11 10:25:56,479 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=52 pTM=0.389 ipTM=0.15 tol=3.25
2024-07-11 10:26:22,751 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=52 pTM=0.388 ipTM=0.146 tol=3.49
2024-07-11 10:26:49,030 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=52.2 pTM=0.393 ipTM=0.148 tol=2.07
2024-07-11 10:27:15,321 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=51.7 pTM=0.386 ipTM=0.147 tol=2.68
2024-07-11 10:27:41,614 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=52.1 pTM=0.388 ipTM=0.147 tol=4.07
2024-07-11 10:28:07,910 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=51.9 pTM=0.387 ipTM=0.144 tol=3.66
2024-07-11 10:28:34,170 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=51.9 pTM=0.387 ipTM=0.15 tol=5.56
2024-07-11 10:29:00,472 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=52.1 pTM=0.39 ipTM=0.148 tol=4.48
2024-07-11 10:29:26,741 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=52.5 pTM=0.396 ipTM=0.151 tol=6.16
2024-07-11 10:29:53,063 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=52.1 pTM=0.389 ipTM=0.144 tol=4.96
2024-07-11 10:30:19,344 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=52.2 pTM=0.391 ipTM=0.15 tol=3.45
2024-07-11 10:30:45,647 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=52.1 pTM=0.389 ipTM=0.148 tol=3.53
2024-07-11 10:31:11,917 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=51.8 pTM=0.388 ipTM=0.148 tol=3.46
2024-07-11 10:31:38,205 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=51.8 pTM=0.386 ipTM=0.148 tol=2.34
2024-07-11 10:32:04,481 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=51.7 pTM=0.388 ipTM=0.151 tol=3.99
2024-07-11 10:32:04,482 alphafold2_multimer_v3_model_4_seed_000 took 815.3s (30 recycles)
2024-07-11 10:32:31,484 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=53.9 pTM=0.408 ipTM=0.219
2024-07-11 10:32:57,754 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=55.9 pTM=0.538 ipTM=0.526 tol=12.8
2024-07-11 10:33:24,052 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=55.9 pTM=0.531 ipTM=0.504 tol=8.64
2024-07-11 10:33:50,336 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=55.6 pTM=0.516 ipTM=0.472 tol=5.7
2024-07-11 10:34:16,616 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=55.3 pTM=0.51 ipTM=0.465 tol=5.93
2024-07-11 10:34:42,911 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=55.1 pTM=0.498 ipTM=0.446 tol=8.3
2024-07-11 10:35:09,192 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=54.5 pTM=0.474 ipTM=0.405 tol=6.09
2024-07-11 10:35:35,507 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=54.4 pTM=0.464 ipTM=0.374 tol=4.07
2024-07-11 10:36:01,816 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=54.1 pTM=0.444 ipTM=0.329 tol=5.28
2024-07-11 10:36:28,092 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=54.3 pTM=0.466 ipTM=0.388 tol=5.84
2024-07-11 10:36:54,358 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=54.3 pTM=0.476 ipTM=0.402 tol=3.97
2024-07-11 10:37:20,631 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=54.5 pTM=0.467 ipTM=0.383 tol=2.42
2024-07-11 10:37:46,919 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=54.6 pTM=0.463 ipTM=0.372 tol=2.54
2024-07-11 10:38:13,201 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=54.5 pTM=0.447 ipTM=0.335 tol=3.34
2024-07-11 10:38:39,479 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=54.6 pTM=0.456 ipTM=0.363 tol=2.12
2024-07-11 10:39:05,747 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=54.3 pTM=0.45 ipTM=0.342 tol=2.83
2024-07-11 10:39:32,019 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=53.9 pTM=0.441 ipTM=0.316 tol=6.82
2024-07-11 10:39:58,317 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=54.3 pTM=0.452 ipTM=0.341 tol=4.26
2024-07-11 10:40:24,605 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=54.2 pTM=0.44 ipTM=0.317 tol=4.16
2024-07-11 10:40:50,884 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=54.2 pTM=0.442 ipTM=0.317 tol=2.6
2024-07-11 10:41:17,164 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=54.1 pTM=0.427 ipTM=0.276 tol=5.19
2024-07-11 10:41:43,444 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=54.4 pTM=0.436 ipTM=0.3 tol=3.71
2024-07-11 10:42:09,740 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=54.3 pTM=0.438 ipTM=0.312 tol=1.8
2024-07-11 10:42:36,020 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=54.3 pTM=0.454 ipTM=0.348 tol=2.72
2024-07-11 10:43:02,321 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=54 pTM=0.438 ipTM=0.316 tol=2.72
2024-07-11 10:43:28,616 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=54.2 pTM=0.437 ipTM=0.299 tol=2.92
2024-07-11 10:43:54,909 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=54.8 pTM=0.489 ipTM=0.427 tol=2.89
2024-07-11 10:44:21,194 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=55.6 pTM=0.489 ipTM=0.426 tol=5.34
2024-07-11 10:44:47,459 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=54.9 pTM=0.47 ipTM=0.384 tol=4.7
2024-07-11 10:45:13,720 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=55.1 pTM=0.483 ipTM=0.413 tol=2.62
2024-07-11 10:45:39,971 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=54.6 pTM=0.456 ipTM=0.353 tol=2.3
2024-07-11 10:45:39,972 alphafold2_multimer_v3_model_5_seed_000 took 814.8s (30 recycles)
2024-07-11 10:45:40,699 reranking models by 'multimer' metric
2024-07-11 10:45:43,929 Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
2024-07-11 10:47:36,072 Relaxation took 115.4s
2024-07-11 10:47:36,072 rank_001_alphafold2_multimer_v3_model_5_seed_000 pLDDT=54.6 pTM=0.456 ipTM=0.353
2024-07-11 10:49:21,705 Relaxation took 105.6s
2024-07-11 10:49:21,705 rank_002_alphafold2_multimer_v3_model_3_seed_000 pLDDT=52.9 pTM=0.411 ipTM=0.244
2024-07-11 10:51:19,782 Relaxation took 118.1s
2024-07-11 10:51:19,782 rank_003_alphafold2_multimer_v3_model_1_seed_000 pLDDT=52.7 pTM=0.394 ipTM=0.186
2024-07-11 10:54:16,813 Relaxation took 177.0s
2024-07-11 10:54:16,813 rank_004_alphafold2_multimer_v3_model_2_seed_000 pLDDT=53.2 pTM=0.388 ipTM=0.179
2024-07-11 10:57:20,684 Relaxation took 183.9s
2024-07-11 10:57:20,684 rank_005_alphafold2_multimer_v3_model_4_seed_000 pLDDT=51.7 pTM=0.388 ipTM=0.151
2024-07-11 10:57:22,746 Done