2024-07-11 09:37:02,134 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3)
2024-07-11 09:37:02,494 Running on GPU
2024-07-11 09:37:06,118 Found 6 citations for tools or databases
2024-07-11 09:37:06,118 Query 1/1: MK13_PDK4 (length 776)
2024-07-11 09:37:06,570 Sleeping for 5s. Reason: PENDING
2024-07-11 09:37:11,999 Sleeping for 9s. Reason: RUNNING
2024-07-11 09:37:21,404 Sleeping for 8s. Reason: RUNNING
2024-07-11 09:37:29,811 Sleeping for 10s. Reason: RUNNING
2024-07-11 09:37:40,211 Sleeping for 7s. Reason: RUNNING
2024-07-11 09:37:47,626 Sleeping for 8s. Reason: RUNNING
2024-07-11 09:37:56,030 Sleeping for 6s. Reason: RUNNING
2024-07-11 09:38:02,425 Sleeping for 5s. Reason: RUNNING
2024-07-11 09:38:07,830 Sleeping for 7s. Reason: RUNNING
2024-07-11 09:38:15,241 Sleeping for 6s. Reason: RUNNING
2024-07-11 09:38:21,650 Sleeping for 5s. Reason: RUNNING
2024-07-11 09:38:27,076 Sleeping for 6s. Reason: RUNNING
2024-07-11 09:38:33,501 Sleeping for 8s. Reason: RUNNING
2024-07-11 09:38:41,900 Sleeping for 7s. Reason: RUNNING
2024-07-11 09:38:49,321 Sleeping for 10s. Reason: RUNNING
2024-07-11 09:38:59,730 Sleeping for 6s. Reason: RUNNING
2024-07-11 09:39:06,140 Sleeping for 7s. Reason: RUNNING
2024-07-11 09:39:13,555 Sleeping for 5s. Reason: RUNNING
2024-07-11 09:39:18,949 Sleeping for 9s. Reason: RUNNING
2024-07-11 09:39:28,359 Sleeping for 7s. Reason: RUNNING
2024-07-11 09:39:35,771 Sleeping for 5s. Reason: RUNNING
2024-07-11 09:39:41,174 Sleeping for 5s. Reason: RUNNING
2024-07-11 09:39:46,578 Sleeping for 8s. Reason: RUNNING
2024-07-11 09:39:54,971 Sleeping for 7s. Reason: RUNNING
2024-07-11 09:40:02,365 Sleeping for 6s. Reason: RUNNING
2024-07-11 09:40:08,759 Sleeping for 5s. Reason: RUNNING
2024-07-11 09:40:14,168 Sleeping for 5s. Reason: RUNNING
2024-07-11 09:40:19,571 Sleeping for 8s. Reason: RUNNING
2024-07-11 09:40:27,987 Sleeping for 9s. Reason: RUNNING
2024-07-11 09:40:37,397 Sleeping for 10s. Reason: RUNNING
2024-07-11 09:40:47,802 Sleeping for 10s. Reason: RUNNING
2024-07-11 09:40:58,221 Sleeping for 6s. Reason: RUNNING
2024-07-11 09:41:06,591 Sleeping for 7s. Reason: PENDING
2024-07-11 09:41:14,003 Sleeping for 9s. Reason: RUNNING
2024-07-11 09:41:23,423 Sleeping for 8s. Reason: RUNNING
2024-07-11 09:41:31,829 Sleeping for 7s. Reason: RUNNING
2024-07-11 09:41:39,250 Sleeping for 7s. Reason: RUNNING
2024-07-11 09:41:46,649 Sleeping for 5s. Reason: RUNNING
2024-07-11 09:41:52,069 Sleeping for 6s. Reason: RUNNING
2024-07-11 09:41:58,493 Sleeping for 10s. Reason: RUNNING
2024-07-11 09:42:08,905 Sleeping for 7s. Reason: RUNNING
2024-07-11 09:42:16,299 Sleeping for 6s. Reason: RUNNING
2024-07-11 09:42:22,705 Sleeping for 8s. Reason: RUNNING
2024-07-11 09:42:31,104 Sleeping for 7s. Reason: RUNNING
2024-07-11 09:42:38,514 Sleeping for 7s. Reason: RUNNING
2024-07-11 09:42:45,929 Sleeping for 10s. Reason: RUNNING
2024-07-11 09:42:56,348 Sleeping for 7s. Reason: RUNNING
2024-07-11 09:43:03,748 Sleeping for 9s. Reason: RUNNING
2024-07-11 09:43:17,123 Setting max_seq=508, max_extra_seq=2048
2024-07-11 09:45:22,938 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=79.4 pTM=0.523 ipTM=0.202
2024-07-11 09:45:33,893 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=82.4 pTM=0.678 ipTM=0.492 tol=5.12
2024-07-11 09:45:44,871 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=83.1 pTM=0.727 ipTM=0.578 tol=0.873
2024-07-11 09:45:55,865 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=83.7 pTM=0.749 ipTM=0.625 tol=0.459
2024-07-11 09:45:55,865 alphafold2_multimer_v3_model_1_seed_000 took 153.6s (3 recycles)
2024-07-11 09:46:07,255 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=79.2 pTM=0.514 ipTM=0.183
2024-07-11 09:46:18,231 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=80 pTM=0.522 ipTM=0.192 tol=13.7
2024-07-11 09:46:29,212 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=79.9 pTM=0.538 ipTM=0.214 tol=3.19
2024-07-11 09:46:40,174 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=81.2 pTM=0.562 ipTM=0.31 tol=4.73
2024-07-11 09:46:51,159 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=81.7 pTM=0.56 ipTM=0.254 tol=0.809
2024-07-11 09:47:02,169 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=80.9 pTM=0.526 ipTM=0.206 tol=2.18
2024-07-11 09:47:13,132 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=80.7 pTM=0.534 ipTM=0.221 tol=0.826
2024-07-11 09:47:24,078 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=81.3 pTM=0.554 ipTM=0.245 tol=1.21
2024-07-11 09:47:35,047 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=80.6 pTM=0.532 ipTM=0.213 tol=1.82
2024-07-11 09:47:46,033 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=80.8 pTM=0.519 ipTM=0.195 tol=0.972
2024-07-11 09:47:57,054 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=80.9 pTM=0.551 ipTM=0.264 tol=2.2
2024-07-11 09:48:08,005 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=81.2 pTM=0.548 ipTM=0.245 tol=0.686
2024-07-11 09:48:18,974 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=80.8 pTM=0.525 ipTM=0.211 tol=1.83
2024-07-11 09:48:29,940 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=80.9 pTM=0.54 ipTM=0.243 tol=1.4
2024-07-11 09:48:40,916 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=81.2 pTM=0.56 ipTM=0.269 tol=1.2
2024-07-11 09:48:51,957 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=80.9 pTM=0.532 ipTM=0.219 tol=1.12
2024-07-11 09:49:02,922 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=80.9 pTM=0.533 ipTM=0.23 tol=1.05
2024-07-11 09:49:13,893 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=80.9 pTM=0.532 ipTM=0.215 tol=0.818
2024-07-11 09:49:24,835 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=80.5 pTM=0.521 ipTM=0.197 tol=1.07
2024-07-11 09:49:35,801 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=80.5 pTM=0.52 ipTM=0.198 tol=0.805
2024-07-11 09:49:46,769 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=80.6 pTM=0.52 ipTM=0.198 tol=0.962
2024-07-11 09:49:57,737 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=80.7 pTM=0.521 ipTM=0.208 tol=0.788
2024-07-11 09:50:08,723 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=80.2 pTM=0.519 ipTM=0.196 tol=1.17
2024-07-11 09:50:19,720 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=80.2 pTM=0.514 ipTM=0.189 tol=0.706
2024-07-11 09:50:30,719 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=80.6 pTM=0.515 ipTM=0.187 tol=1.27
2024-07-11 09:50:41,712 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=80.8 pTM=0.53 ipTM=0.223 tol=1.24
2024-07-11 09:50:52,663 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=81 pTM=0.55 ipTM=0.264 tol=1.46
2024-07-11 09:51:03,602 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=80.7 pTM=0.534 ipTM=0.223 tol=1.14
2024-07-11 09:51:14,550 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=80.8 pTM=0.527 ipTM=0.214 tol=0.981
2024-07-11 09:51:25,523 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=80.8 pTM=0.531 ipTM=0.23 tol=0.728
2024-07-11 09:51:36,506 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=80.7 pTM=0.541 ipTM=0.247 tol=1.25
2024-07-11 09:51:36,507 alphafold2_multimer_v3_model_2_seed_000 took 340.3s (30 recycles)
2024-07-11 09:51:47,863 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=79.4 pTM=0.545 ipTM=0.223
2024-07-11 09:51:58,898 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=81.6 pTM=0.608 ipTM=0.389 tol=6.23
2024-07-11 09:52:09,958 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=81.2 pTM=0.566 ipTM=0.254 tol=2.14
2024-07-11 09:52:20,996 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=80.3 pTM=0.535 ipTM=0.203 tol=1.7
2024-07-11 09:52:32,006 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=80.4 pTM=0.534 ipTM=0.209 tol=1.09
2024-07-11 09:52:43,002 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=80.1 pTM=0.526 ipTM=0.196 tol=0.979
2024-07-11 09:52:53,990 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=80.1 pTM=0.522 ipTM=0.192 tol=0.919
2024-07-11 09:53:04,983 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=81.3 pTM=0.584 ipTM=0.319 tol=3.43
2024-07-11 09:53:15,994 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=81.1 pTM=0.56 ipTM=0.235 tol=2
2024-07-11 09:53:27,011 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=80.1 pTM=0.532 ipTM=0.206 tol=1.65
2024-07-11 09:53:38,075 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=80.3 pTM=0.526 ipTM=0.199 tol=0.967
2024-07-11 09:53:49,100 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=80.1 pTM=0.521 ipTM=0.193 tol=0.925
2024-07-11 09:54:00,118 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=80 pTM=0.513 ipTM=0.177 tol=0.934
2024-07-11 09:54:11,137 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=79.8 pTM=0.521 ipTM=0.192 tol=0.66
2024-07-11 09:54:22,145 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=80 pTM=0.526 ipTM=0.19 tol=0.869
2024-07-11 09:54:33,168 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=80.1 pTM=0.52 ipTM=0.189 tol=0.736
2024-07-11 09:54:44,167 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=80.1 pTM=0.527 ipTM=0.196 tol=0.926
2024-07-11 09:54:55,180 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=79.9 pTM=0.524 ipTM=0.2 tol=0.928
2024-07-11 09:55:06,186 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=79.9 pTM=0.521 ipTM=0.193 tol=0.785
2024-07-11 09:55:17,207 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=80 pTM=0.521 ipTM=0.188 tol=0.864
2024-07-11 09:55:28,209 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=79.8 pTM=0.521 ipTM=0.188 tol=0.642
2024-07-11 09:55:39,218 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=79.9 pTM=0.52 ipTM=0.189 tol=0.517
2024-07-11 09:55:50,226 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=79.8 pTM=0.517 ipTM=0.183 tol=0.937
2024-07-11 09:56:01,235 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=79.8 pTM=0.518 ipTM=0.183 tol=0.55
2024-07-11 09:56:12,243 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=79.7 pTM=0.516 ipTM=0.182 tol=1.04
2024-07-11 09:56:23,234 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=79.6 pTM=0.521 ipTM=0.192 tol=2.03
2024-07-11 09:56:34,236 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=79.7 pTM=0.517 ipTM=0.186 tol=1.82
2024-07-11 09:56:45,227 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=79.7 pTM=0.521 ipTM=0.189 tol=1.64
2024-07-11 09:56:56,234 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=79.5 pTM=0.515 ipTM=0.182 tol=2.84
2024-07-11 09:57:07,239 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=79.9 pTM=0.543 ipTM=0.233 tol=3.24
2024-07-11 09:57:18,235 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=80.1 pTM=0.527 ipTM=0.199 tol=1.03
2024-07-11 09:57:18,236 alphafold2_multimer_v3_model_3_seed_000 took 341.3s (30 recycles)
2024-07-11 09:57:29,617 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=79.4 pTM=0.519 ipTM=0.173
2024-07-11 09:57:40,629 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=80.9 pTM=0.586 ipTM=0.292 tol=4.65
2024-07-11 09:57:51,650 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=81.4 pTM=0.542 ipTM=0.199 tol=1.52
2024-07-11 09:58:02,694 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=80.5 pTM=0.523 ipTM=0.182 tol=1.38
2024-07-11 09:58:13,748 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=80.8 pTM=0.517 ipTM=0.169 tol=1.94
2024-07-11 09:58:24,780 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=80.1 pTM=0.52 ipTM=0.181 tol=1.42
2024-07-11 09:58:35,808 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=80.2 pTM=0.511 ipTM=0.174 tol=2.11
2024-07-11 09:58:46,831 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=80.2 pTM=0.521 ipTM=0.192 tol=2.34
2024-07-11 09:58:57,874 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=80.5 pTM=0.52 ipTM=0.183 tol=2.13
2024-07-11 09:59:08,911 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=80.4 pTM=0.518 ipTM=0.181 tol=1.92
2024-07-11 09:59:19,937 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=80.3 pTM=0.523 ipTM=0.193 tol=2.86
2024-07-11 09:59:30,944 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=80.5 pTM=0.527 ipTM=0.191 tol=3.11
2024-07-11 09:59:41,978 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=80.7 pTM=0.526 ipTM=0.189 tol=2.25
2024-07-11 09:59:52,993 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=80.7 pTM=0.542 ipTM=0.205 tol=1.74
2024-07-11 10:00:04,020 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=80.7 pTM=0.544 ipTM=0.228 tol=2.6
2024-07-11 10:00:15,029 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=81.1 pTM=0.532 ipTM=0.194 tol=2.53
2024-07-11 10:00:26,040 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=80.4 pTM=0.534 ipTM=0.198 tol=2.34
2024-07-11 10:00:37,066 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=81 pTM=0.556 ipTM=0.233 tol=2.01
2024-07-11 10:00:48,093 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=80.9 pTM=0.565 ipTM=0.259 tol=1.94
2024-07-11 10:00:59,109 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=81.2 pTM=0.579 ipTM=0.286 tol=1.88
2024-07-11 10:01:10,127 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=80.8 pTM=0.579 ipTM=0.283 tol=1.85
2024-07-11 10:01:21,136 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=81 pTM=0.562 ipTM=0.247 tol=1.87
2024-07-11 10:01:32,137 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=80.6 pTM=0.576 ipTM=0.274 tol=1.84
2024-07-11 10:01:43,140 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=80.9 pTM=0.574 ipTM=0.277 tol=1.78
2024-07-11 10:01:54,149 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=80.8 pTM=0.583 ipTM=0.288 tol=1.55
2024-07-11 10:02:05,170 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=81.4 pTM=0.581 ipTM=0.29 tol=1.36
2024-07-11 10:02:16,189 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=80.9 pTM=0.583 ipTM=0.284 tol=1.33
2024-07-11 10:02:27,206 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=81.3 pTM=0.573 ipTM=0.266 tol=1.66
2024-07-11 10:02:38,218 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=81.1 pTM=0.597 ipTM=0.317 tol=1.79
2024-07-11 10:02:49,229 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=81.4 pTM=0.605 ipTM=0.343 tol=1.08
2024-07-11 10:03:00,258 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=81.2 pTM=0.605 ipTM=0.339 tol=1.13
2024-07-11 10:03:00,259 alphafold2_multimer_v3_model_4_seed_000 took 341.6s (30 recycles)
2024-07-11 10:03:11,620 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=78.3 pTM=0.529 ipTM=0.201
2024-07-11 10:03:22,649 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=82.3 pTM=0.74 ipTM=0.6 tol=5.15
2024-07-11 10:03:33,657 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=81.9 pTM=0.695 ipTM=0.501 tol=1.43
2024-07-11 10:03:44,668 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=81.2 pTM=0.562 ipTM=0.226 tol=2.08
2024-07-11 10:03:55,688 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=80.7 pTM=0.549 ipTM=0.214 tol=0.669
2024-07-11 10:04:06,698 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=80.4 pTM=0.543 ipTM=0.196 tol=1.29
2024-07-11 10:04:17,724 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=80.4 pTM=0.533 ipTM=0.194 tol=1.11
2024-07-11 10:04:28,729 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=80.4 pTM=0.536 ipTM=0.193 tol=1.23
2024-07-11 10:04:39,780 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=80.1 pTM=0.539 ipTM=0.195 tol=1.05
2024-07-11 10:04:50,826 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=80.2 pTM=0.532 ipTM=0.187 tol=0.575
2024-07-11 10:05:01,857 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=80.2 pTM=0.522 ipTM=0.186 tol=1.12
2024-07-11 10:05:12,899 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=80 pTM=0.518 ipTM=0.179 tol=1.09
2024-07-11 10:05:23,941 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=80.1 pTM=0.517 ipTM=0.181 tol=0.688
2024-07-11 10:05:34,947 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=79.8 pTM=0.514 ipTM=0.171 tol=1.13
2024-07-11 10:05:46,014 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=79.6 pTM=0.52 ipTM=0.183 tol=0.974
2024-07-11 10:05:57,084 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=80.2 pTM=0.516 ipTM=0.173 tol=1.43
2024-07-11 10:06:08,153 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=79.8 pTM=0.513 ipTM=0.174 tol=1.04
2024-07-11 10:06:19,223 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=80.1 pTM=0.516 ipTM=0.168 tol=0.764
2024-07-11 10:06:30,290 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=79.9 pTM=0.517 ipTM=0.179 tol=1.05
2024-07-11 10:06:41,347 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=80.1 pTM=0.517 ipTM=0.177 tol=1.16
2024-07-11 10:06:52,404 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=79.7 pTM=0.515 ipTM=0.175 tol=0.309
2024-07-11 10:06:52,405 alphafold2_multimer_v3_model_5_seed_000 took 231.8s (20 recycles)
2024-07-11 10:06:52,788 reranking models by 'multimer' metric
2024-07-11 10:06:56,068 Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
2024-07-11 10:07:24,078 Relaxation took 31.3s
2024-07-11 10:07:24,078 rank_001_alphafold2_multimer_v3_model_1_seed_000 pLDDT=83.7 pTM=0.749 ipTM=0.625
2024-07-11 10:07:46,736 Relaxation took 22.7s
2024-07-11 10:07:46,736 rank_002_alphafold2_multimer_v3_model_4_seed_000 pLDDT=81.2 pTM=0.605 ipTM=0.339
2024-07-11 10:09:21,464 Relaxation took 94.7s
2024-07-11 10:09:21,464 rank_003_alphafold2_multimer_v3_model_2_seed_000 pLDDT=80.7 pTM=0.541 ipTM=0.247
2024-07-11 10:09:46,572 Relaxation took 25.1s
2024-07-11 10:09:46,572 rank_004_alphafold2_multimer_v3_model_3_seed_000 pLDDT=80.1 pTM=0.527 ipTM=0.199
2024-07-11 10:10:43,670 Relaxation took 57.1s
2024-07-11 10:10:43,670 rank_005_alphafold2_multimer_v3_model_5_seed_000 pLDDT=79.7 pTM=0.515 ipTM=0.175
2024-07-11 10:10:45,175 Done