2024-07-11 09:38:39,347 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3)
2024-07-11 09:38:39,678 Running on GPU
2024-07-11 09:38:43,254 Found 6 citations for tools or databases
2024-07-11 09:38:43,254 Query 1/1: MLH1_PCDBE (length 1554)
2024-07-11 09:38:43,725 Sleeping for 6s. Reason: PENDING
2024-07-11 09:38:50,131 Sleeping for 10s. Reason: RUNNING
2024-07-11 09:39:00,533 Sleeping for 5s. Reason: RUNNING
2024-07-11 09:39:05,958 Sleeping for 5s. Reason: RUNNING
2024-07-11 09:39:11,362 Sleeping for 9s. Reason: RUNNING
2024-07-11 09:39:20,755 Sleeping for 5s. Reason: RUNNING
2024-07-11 09:39:26,166 Sleeping for 10s. Reason: RUNNING
2024-07-11 09:39:36,593 Sleeping for 8s. Reason: RUNNING
2024-07-11 09:39:44,998 Sleeping for 10s. Reason: RUNNING
2024-07-11 09:39:55,398 Sleeping for 7s. Reason: RUNNING
2024-07-11 09:40:02,792 Sleeping for 10s. Reason: RUNNING
2024-07-11 09:40:13,250 Sleeping for 8s. Reason: RUNNING
2024-07-11 09:40:21,645 Sleeping for 5s. Reason: RUNNING
2024-07-11 09:40:27,063 Sleeping for 8s. Reason: RUNNING
2024-07-11 09:40:35,473 Sleeping for 9s. Reason: RUNNING
2024-07-11 09:40:44,903 Sleeping for 9s. Reason: RUNNING
2024-07-11 09:40:54,311 Sleeping for 5s. Reason: RUNNING
2024-07-11 09:40:59,709 Sleeping for 9s. Reason: RUNNING
2024-07-11 09:41:09,115 Sleeping for 7s. Reason: RUNNING
2024-07-11 09:41:16,523 Sleeping for 6s. Reason: RUNNING
2024-07-11 09:41:22,922 Sleeping for 9s. Reason: RUNNING
2024-07-11 09:41:32,333 Sleeping for 8s. Reason: RUNNING
2024-07-11 09:41:40,742 Sleeping for 5s. Reason: RUNNING
2024-07-11 09:41:46,151 Sleeping for 9s. Reason: RUNNING
2024-07-11 09:41:55,566 Sleeping for 5s. Reason: RUNNING
2024-07-11 09:42:00,982 Sleeping for 6s. Reason: RUNNING
2024-07-11 09:42:07,383 Sleeping for 9s. Reason: RUNNING
2024-07-11 09:42:16,808 Sleeping for 7s. Reason: RUNNING
2024-07-11 09:42:24,223 Sleeping for 9s. Reason: RUNNING
2024-07-11 09:42:33,624 Sleeping for 10s. Reason: RUNNING
2024-07-11 09:42:44,029 Sleeping for 8s. Reason: RUNNING
2024-07-11 09:42:52,447 Sleeping for 8s. Reason: RUNNING
2024-07-11 09:43:03,093 Sleeping for 6s. Reason: PENDING
2024-07-11 09:43:09,497 Sleeping for 8s. Reason: RUNNING
2024-07-11 09:43:17,906 Sleeping for 9s. Reason: RUNNING
2024-07-11 09:43:27,351 Sleeping for 7s. Reason: RUNNING
2024-07-11 09:43:34,746 Sleeping for 9s. Reason: RUNNING
2024-07-11 09:43:44,153 Sleeping for 5s. Reason: RUNNING
2024-07-11 09:43:49,567 Sleeping for 7s. Reason: RUNNING
2024-07-11 09:43:56,963 Sleeping for 9s. Reason: RUNNING
2024-07-11 09:44:06,392 Sleeping for 7s. Reason: RUNNING
2024-07-11 09:44:13,824 Sleeping for 7s. Reason: RUNNING
2024-07-11 09:44:21,232 Sleeping for 8s. Reason: RUNNING
2024-07-11 09:44:29,653 Sleeping for 6s. Reason: RUNNING
2024-07-11 09:44:36,050 Sleeping for 9s. Reason: RUNNING
2024-07-11 09:44:45,472 Sleeping for 5s. Reason: RUNNING
2024-07-11 09:44:50,885 Sleeping for 8s. Reason: RUNNING
2024-07-11 09:44:59,288 Sleeping for 9s. Reason: RUNNING
2024-07-11 09:45:08,689 Sleeping for 6s. Reason: RUNNING
2024-07-11 09:45:15,093 Sleeping for 10s. Reason: RUNNING
2024-07-11 09:45:25,497 Sleeping for 9s. Reason: RUNNING
2024-07-11 09:45:41,445 Setting max_seq=508, max_extra_seq=2048
2024-07-11 09:49:26,822 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=69.3 pTM=0.316 ipTM=0.176
2024-07-11 09:50:39,155 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=69.1 pTM=0.332 ipTM=0.182 tol=9.78
2024-07-11 09:51:51,530 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=69.7 pTM=0.338 ipTM=0.196 tol=6.68
2024-07-11 09:53:03,922 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=69.5 pTM=0.343 ipTM=0.194 tol=5.39
2024-07-11 09:54:16,333 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=69.5 pTM=0.337 ipTM=0.19 tol=4.39
2024-07-11 09:55:28,762 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=69.1 pTM=0.336 ipTM=0.203 tol=5.2
2024-07-11 09:56:41,168 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=69.3 pTM=0.339 ipTM=0.2 tol=3.69
2024-07-11 09:57:53,596 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=69.6 pTM=0.334 ipTM=0.192 tol=4.52
2024-07-11 09:59:06,045 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=69.4 pTM=0.334 ipTM=0.191 tol=6.28
2024-07-11 10:00:18,493 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=69.2 pTM=0.333 ipTM=0.19 tol=6.2
2024-07-11 10:01:30,924 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=69.4 pTM=0.337 ipTM=0.191 tol=6.5
2024-07-11 10:02:43,354 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=69.1 pTM=0.336 ipTM=0.191 tol=4.79
2024-07-11 10:03:55,764 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=69.1 pTM=0.338 ipTM=0.193 tol=6.93
2024-07-11 10:05:08,183 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=69 pTM=0.338 ipTM=0.193 tol=10.2
2024-07-11 10:06:20,626 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=68.8 pTM=0.335 ipTM=0.19 tol=6.95
2024-07-11 10:07:33,034 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=69.2 pTM=0.338 ipTM=0.189 tol=7.18
2024-07-11 10:08:45,392 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=68.9 pTM=0.335 ipTM=0.192 tol=7.7
2024-07-11 10:09:57,808 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=68.9 pTM=0.34 ipTM=0.188 tol=2.97
2024-07-11 10:11:10,161 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=68.9 pTM=0.343 ipTM=0.191 tol=4.95
2024-07-11 10:12:22,490 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=69.2 pTM=0.335 ipTM=0.191 tol=3.35
2024-07-11 10:13:34,883 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=69.3 pTM=0.336 ipTM=0.192 tol=2.68
2024-07-11 10:14:47,300 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=69.2 pTM=0.34 ipTM=0.192 tol=3.74
2024-07-11 10:15:59,739 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=69 pTM=0.337 ipTM=0.191 tol=3.71
2024-07-11 10:17:12,177 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=69.1 pTM=0.338 ipTM=0.19 tol=5.36
2024-07-11 10:18:24,614 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=69.2 pTM=0.335 ipTM=0.19 tol=3.68
2024-07-11 10:19:37,036 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=69.2 pTM=0.34 ipTM=0.191 tol=6.59
2024-07-11 10:20:49,498 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=69.1 pTM=0.336 ipTM=0.194 tol=4.91
2024-07-11 10:22:01,955 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=69.1 pTM=0.333 ipTM=0.191 tol=6.13
2024-07-11 10:23:14,389 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=69.2 pTM=0.333 ipTM=0.189 tol=5.84
2024-07-11 10:24:26,843 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=69.1 pTM=0.337 ipTM=0.189 tol=3.3
2024-07-11 10:25:39,295 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=69.4 pTM=0.331 ipTM=0.189 tol=3.12
2024-07-11 10:25:39,297 alphafold2_multimer_v3_model_1_seed_000 took 2392.7s (30 recycles)
2024-07-11 10:26:53,338 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=69.8 pTM=0.327 ipTM=0.191
2024-07-11 10:28:05,745 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=69.5 pTM=0.346 ipTM=0.184 tol=15.2
2024-07-11 10:29:18,182 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=71 pTM=0.342 ipTM=0.182 tol=6.98
2024-07-11 10:30:30,636 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=71.6 pTM=0.342 ipTM=0.187 tol=4.17
2024-07-11 10:31:43,096 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=71.5 pTM=0.343 ipTM=0.189 tol=4.7
2024-07-11 10:32:55,545 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=71.4 pTM=0.337 ipTM=0.187 tol=6.15
2024-07-11 10:34:08,126 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=71.6 pTM=0.341 ipTM=0.188 tol=4.68
2024-07-11 10:35:20,643 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=71.9 pTM=0.335 ipTM=0.184 tol=5.82
2024-07-11 10:36:33,103 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=71.7 pTM=0.334 ipTM=0.185 tol=3.61
2024-07-11 10:37:45,594 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=71.9 pTM=0.329 ipTM=0.185 tol=4.05
2024-07-11 10:38:58,054 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=71.9 pTM=0.332 ipTM=0.182 tol=3.91
2024-07-11 10:40:10,501 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=72.1 pTM=0.327 ipTM=0.181 tol=4.16
2024-07-11 10:41:22,970 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=71.9 pTM=0.333 ipTM=0.183 tol=4.96
2024-07-11 10:42:35,425 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=71.9 pTM=0.333 ipTM=0.185 tol=2.32
2024-07-11 10:43:47,942 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=71.9 pTM=0.331 ipTM=0.185 tol=1.77
2024-07-11 10:45:00,421 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=71.9 pTM=0.329 ipTM=0.182 tol=1.77
2024-07-11 10:46:12,875 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=71.8 pTM=0.329 ipTM=0.184 tol=1.89
2024-07-11 10:47:25,373 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=71.7 pTM=0.332 ipTM=0.186 tol=2.47
2024-07-11 10:48:37,955 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=71.6 pTM=0.33 ipTM=0.184 tol=5.23
2024-07-11 10:49:50,492 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=71.6 pTM=0.331 ipTM=0.182 tol=3.86
2024-07-11 10:51:03,044 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=71.7 pTM=0.332 ipTM=0.183 tol=3.07
2024-07-11 10:52:15,585 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=71.7 pTM=0.333 ipTM=0.183 tol=3.26
2024-07-11 10:53:28,143 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=71.6 pTM=0.33 ipTM=0.18 tol=2.31
2024-07-11 10:54:40,627 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=71.5 pTM=0.333 ipTM=0.182 tol=2.74
2024-07-11 10:55:53,130 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=71.8 pTM=0.332 ipTM=0.18 tol=2.89
2024-07-11 10:57:05,682 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=71.7 pTM=0.335 ipTM=0.184 tol=3.17
2024-07-11 10:58:18,266 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=71.8 pTM=0.333 ipTM=0.184 tol=2.31
2024-07-11 10:59:30,719 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=71.8 pTM=0.331 ipTM=0.18 tol=2.36
2024-07-11 11:00:43,191 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=71.8 pTM=0.334 ipTM=0.182 tol=2.61
2024-07-11 11:01:55,617 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=71.8 pTM=0.334 ipTM=0.182 tol=2.18
2024-07-11 11:03:08,101 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=71.6 pTM=0.334 ipTM=0.183 tol=4.23
2024-07-11 11:03:08,103 alphafold2_multimer_v3_model_2_seed_000 took 2247.4s (30 recycles)
2024-07-11 11:04:22,276 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=67.9 pTM=0.329 ipTM=0.181
2024-07-11 11:05:34,791 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=68.7 pTM=0.338 ipTM=0.201 tol=27.9
2024-07-11 11:06:47,385 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=68.9 pTM=0.346 ipTM=0.178 tol=11.2
2024-07-11 11:07:59,877 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=68.4 pTM=0.343 ipTM=0.177 tol=10.5
2024-07-11 11:09:12,390 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=68.8 pTM=0.342 ipTM=0.164 tol=8.28
2024-07-11 11:10:24,906 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=68.4 pTM=0.34 ipTM=0.177 tol=8.95
2024-07-11 11:11:37,415 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=68.9 pTM=0.344 ipTM=0.173 tol=8.86
2024-07-11 11:12:50,049 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=68.9 pTM=0.341 ipTM=0.172 tol=6.6
2024-07-11 11:14:02,665 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=68.9 pTM=0.339 ipTM=0.17 tol=3.56
2024-07-11 11:15:15,249 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=69 pTM=0.34 ipTM=0.169 tol=2.6
2024-07-11 11:16:27,849 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=69 pTM=0.34 ipTM=0.169 tol=3.29
2024-07-11 11:17:40,396 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=68.9 pTM=0.34 ipTM=0.173 tol=6.21
2024-07-11 11:18:52,961 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=68.9 pTM=0.342 ipTM=0.172 tol=4.14
2024-07-11 11:20:05,574 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=68.9 pTM=0.341 ipTM=0.173 tol=2.82
2024-07-11 11:21:18,144 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=69 pTM=0.341 ipTM=0.167 tol=4.1
2024-07-11 11:22:30,699 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=68.9 pTM=0.34 ipTM=0.169 tol=3.18
2024-07-11 11:23:43,230 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=69.1 pTM=0.34 ipTM=0.171 tol=1.98
2024-07-11 11:24:55,816 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=69.1 pTM=0.343 ipTM=0.17 tol=1.63
2024-07-11 11:26:08,415 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=68.9 pTM=0.342 ipTM=0.17 tol=1.85
2024-07-11 11:27:20,988 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=69 pTM=0.341 ipTM=0.17 tol=2.3
2024-07-11 11:28:33,579 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=68.9 pTM=0.343 ipTM=0.17 tol=1.46
2024-07-11 11:29:46,184 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=69.1 pTM=0.342 ipTM=0.169 tol=1.96
2024-07-11 11:30:58,836 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=69.1 pTM=0.339 ipTM=0.169 tol=2.27
2024-07-11 11:32:11,488 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=68.9 pTM=0.34 ipTM=0.17 tol=2.89
2024-07-11 11:33:24,083 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=69 pTM=0.341 ipTM=0.17 tol=3.8
2024-07-11 11:34:36,670 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=68.9 pTM=0.341 ipTM=0.172 tol=4.19
2024-07-11 11:35:49,247 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=69.1 pTM=0.341 ipTM=0.171 tol=6.39
2024-07-11 11:37:01,827 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=69.1 pTM=0.341 ipTM=0.17 tol=4.52
2024-07-11 11:38:14,475 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=69 pTM=0.342 ipTM=0.171 tol=3.05
2024-07-11 11:39:27,074 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=69.1 pTM=0.344 ipTM=0.172 tol=3.37
2024-07-11 11:40:39,615 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=69 pTM=0.343 ipTM=0.171 tol=4.08
2024-07-11 11:40:39,617 alphafold2_multimer_v3_model_3_seed_000 took 2250.1s (30 recycles)
2024-07-11 11:41:53,520 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=67.1 pTM=0.338 ipTM=0.187
2024-07-11 11:43:06,069 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=66.7 pTM=0.352 ipTM=0.186 tol=19.8
2024-07-11 11:44:18,626 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=68.4 pTM=0.344 ipTM=0.207 tol=15.2
2024-07-11 11:45:31,226 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=69.2 pTM=0.344 ipTM=0.187 tol=14.4
2024-07-11 11:46:43,821 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=68.8 pTM=0.343 ipTM=0.179 tol=8.81
2024-07-11 11:47:56,360 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=68.8 pTM=0.343 ipTM=0.196 tol=7.29
2024-07-11 11:49:08,930 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=68.2 pTM=0.348 ipTM=0.195 tol=9.3
2024-07-11 11:50:21,503 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=69.1 pTM=0.345 ipTM=0.185 tol=4.14
2024-07-11 11:51:34,092 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=68.4 pTM=0.346 ipTM=0.188 tol=3.54
2024-07-11 11:52:46,720 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=68.8 pTM=0.346 ipTM=0.185 tol=4.28
2024-07-11 11:53:59,400 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=68.5 pTM=0.348 ipTM=0.19 tol=4.73
2024-07-11 11:55:12,035 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=68.2 pTM=0.348 ipTM=0.189 tol=4.85
2024-07-11 11:56:24,674 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=68.4 pTM=0.35 ipTM=0.188 tol=4.21
2024-07-11 11:57:37,329 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=68.2 pTM=0.349 ipTM=0.191 tol=5.39
2024-07-11 11:58:49,918 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=68.4 pTM=0.35 ipTM=0.191 tol=3.59
2024-07-11 12:00:02,567 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=68.2 pTM=0.351 ipTM=0.193 tol=3.93
2024-07-11 12:01:15,164 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=68.2 pTM=0.351 ipTM=0.197 tol=4.53
2024-07-11 12:02:27,764 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=68.4 pTM=0.352 ipTM=0.194 tol=5.92
2024-07-11 12:03:40,384 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=67.9 pTM=0.353 ipTM=0.196 tol=5.25
2024-07-11 12:04:53,005 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=68.2 pTM=0.353 ipTM=0.198 tol=4.44
2024-07-11 12:06:05,620 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=67.9 pTM=0.352 ipTM=0.199 tol=4.88
2024-07-11 12:07:18,221 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=67.9 pTM=0.353 ipTM=0.2 tol=4.94
2024-07-11 12:08:30,809 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=67.9 pTM=0.351 ipTM=0.196 tol=5.79
2024-07-11 12:09:43,424 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=68.2 pTM=0.352 ipTM=0.195 tol=5.22
2024-07-11 12:10:56,050 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=68.2 pTM=0.35 ipTM=0.196 tol=6.38
2024-07-11 12:12:08,727 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=68.4 pTM=0.349 ipTM=0.194 tol=10.5
2024-07-11 12:13:21,367 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=68.5 pTM=0.348 ipTM=0.192 tol=9.19
2024-07-11 12:14:34,014 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=68.8 pTM=0.35 ipTM=0.189 tol=10.4
2024-07-11 12:15:46,635 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=68.8 pTM=0.348 ipTM=0.193 tol=6.2
2024-07-11 12:16:59,156 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=68.3 pTM=0.351 ipTM=0.202 tol=6.2
2024-07-11 12:18:11,782 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=68.5 pTM=0.35 ipTM=0.199 tol=4.93
2024-07-11 12:18:11,783 alphafold2_multimer_v3_model_4_seed_000 took 2250.7s (30 recycles)
2024-07-11 12:19:25,925 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=67 pTM=0.325 ipTM=0.164
2024-07-11 12:20:38,548 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=68.7 pTM=0.332 ipTM=0.268 tol=11.1
2024-07-11 12:21:51,034 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=69.1 pTM=0.336 ipTM=0.201 tol=6.93
2024-07-11 12:23:03,522 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=69.2 pTM=0.333 ipTM=0.183 tol=7.34
2024-07-11 12:24:16,030 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=69.2 pTM=0.332 ipTM=0.182 tol=6.3
2024-07-11 12:25:28,637 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=69.4 pTM=0.332 ipTM=0.183 tol=8.65
2024-07-11 12:26:41,164 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=69.5 pTM=0.333 ipTM=0.187 tol=5.86
2024-07-11 12:27:53,673 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=69.6 pTM=0.334 ipTM=0.185 tol=2.28
2024-07-11 12:29:06,203 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=69.4 pTM=0.332 ipTM=0.186 tol=3.72
2024-07-11 12:30:18,749 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=69.5 pTM=0.333 ipTM=0.185 tol=4.07
2024-07-11 12:31:31,280 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=69.6 pTM=0.333 ipTM=0.184 tol=3.74
2024-07-11 12:32:43,801 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=69.6 pTM=0.334 ipTM=0.185 tol=4.13
2024-07-11 12:33:56,390 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=69.7 pTM=0.336 ipTM=0.188 tol=3.57
2024-07-11 12:35:08,976 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=69.7 pTM=0.335 ipTM=0.185 tol=3.91
2024-07-11 12:36:21,537 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=69.7 pTM=0.335 ipTM=0.187 tol=5.39
2024-07-11 12:37:34,140 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=69.5 pTM=0.334 ipTM=0.188 tol=5.12
2024-07-11 12:38:46,683 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=69.5 pTM=0.335 ipTM=0.192 tol=4.58
2024-07-11 12:39:59,194 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=69.6 pTM=0.337 ipTM=0.189 tol=3.36
2024-07-11 12:41:11,748 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=69.4 pTM=0.336 ipTM=0.189 tol=1.96
2024-07-11 12:42:24,341 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=69.6 pTM=0.336 ipTM=0.189 tol=3.33
2024-07-11 12:43:36,940 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=69.4 pTM=0.335 ipTM=0.189 tol=3.27
2024-07-11 12:44:49,476 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=69.4 pTM=0.335 ipTM=0.188 tol=1.75
2024-07-11 12:46:01,993 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=69.6 pTM=0.335 ipTM=0.186 tol=3.38
2024-07-11 12:47:14,585 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=69.5 pTM=0.336 ipTM=0.188 tol=1.74
2024-07-11 12:48:27,149 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=69.4 pTM=0.335 ipTM=0.188 tol=5.95
2024-07-11 12:49:39,696 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=69.4 pTM=0.333 ipTM=0.189 tol=4.25
2024-07-11 12:50:52,245 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=69.5 pTM=0.334 ipTM=0.191 tol=4.55
2024-07-11 12:52:04,729 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=69.5 pTM=0.335 ipTM=0.191 tol=3.63
2024-07-11 12:53:17,218 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=69.4 pTM=0.334 ipTM=0.191 tol=4.5
2024-07-11 12:54:29,680 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=69.5 pTM=0.336 ipTM=0.193 tol=2.87
2024-07-11 12:55:42,176 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=69.4 pTM=0.336 ipTM=0.192 tol=3.1
2024-07-11 12:55:42,178 alphafold2_multimer_v3_model_5_seed_000 took 2249.0s (30 recycles)
2024-07-11 12:55:43,609 reranking models by 'multimer' metric
2024-07-11 12:55:45,210 Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
2024-07-11 13:00:12,899 Relaxation took 269.3s
2024-07-11 13:00:12,899 rank_001_alphafold2_multimer_v3_model_4_seed_000 pLDDT=68.5 pTM=0.35 ipTM=0.199
2024-07-11 13:04:15,253 Relaxation took 242.4s
2024-07-11 13:04:15,253 rank_002_alphafold2_multimer_v3_model_5_seed_000 pLDDT=69.4 pTM=0.336 ipTM=0.192
2024-07-11 13:08:23,425 Relaxation took 248.2s
2024-07-11 13:08:23,425 rank_003_alphafold2_multimer_v3_model_1_seed_000 pLDDT=69.4 pTM=0.331 ipTM=0.189
2024-07-11 13:11:13,067 Relaxation took 169.6s
2024-07-11 13:11:13,067 rank_004_alphafold2_multimer_v3_model_2_seed_000 pLDDT=71.6 pTM=0.334 ipTM=0.183
2024-07-11 13:14:11,960 Relaxation took 178.9s
2024-07-11 13:14:11,961 rank_005_alphafold2_multimer_v3_model_3_seed_000 pLDDT=69 pTM=0.343 ipTM=0.171
2024-07-11 13:14:15,219 Done