2024-07-11 10:35:29,652 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3)
2024-07-11 10:35:29,979 Running on GPU
2024-07-11 10:35:33,716 Found 6 citations for tools or databases
2024-07-11 10:35:33,716 Query 1/1: MOFA1_PRDM5 (length 757)
2024-07-11 10:35:34,170 Sleeping for 5s. Reason: PENDING
2024-07-11 10:35:39,580 Sleeping for 7s. Reason: RUNNING
2024-07-11 10:35:46,997 Sleeping for 8s. Reason: RUNNING
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2024-07-11 10:36:27,069 Sleeping for 8s. Reason: RUNNING
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2024-07-11 10:36:44,900 Sleeping for 6s. Reason: RUNNING
2024-07-11 10:36:51,317 Sleeping for 8s. Reason: RUNNING
2024-07-11 10:36:59,732 Sleeping for 6s. Reason: RUNNING
2024-07-11 10:37:06,124 Sleeping for 9s. Reason: RUNNING
2024-07-11 10:37:15,541 Sleeping for 6s. Reason: RUNNING
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2024-07-11 10:37:29,356 Sleeping for 10s. Reason: RUNNING
2024-07-11 10:37:39,763 Sleeping for 6s. Reason: RUNNING
2024-07-11 10:37:46,184 Sleeping for 10s. Reason: RUNNING
2024-07-11 10:37:56,594 Sleeping for 5s. Reason: RUNNING
2024-07-11 10:38:02,000 Sleeping for 10s. Reason: RUNNING
2024-07-11 10:38:12,412 Sleeping for 7s. Reason: RUNNING
2024-07-11 10:38:19,821 Sleeping for 10s. Reason: RUNNING
2024-07-11 10:38:30,230 Sleeping for 7s. Reason: RUNNING
2024-07-11 10:38:37,653 Sleeping for 9s. Reason: RUNNING
2024-07-11 10:38:47,052 Sleeping for 7s. Reason: RUNNING
2024-07-11 10:38:56,277 Sleeping for 6s. Reason: PENDING
2024-07-11 10:39:02,670 Sleeping for 8s. Reason: RUNNING
2024-07-11 10:39:11,085 Sleeping for 10s. Reason: RUNNING
2024-07-11 10:39:21,493 Sleeping for 7s. Reason: RUNNING
2024-07-11 10:39:28,901 Sleeping for 6s. Reason: RUNNING
2024-07-11 10:39:35,312 Sleeping for 6s. Reason: RUNNING
2024-07-11 10:39:41,728 Sleeping for 5s. Reason: RUNNING
2024-07-11 10:39:47,132 Sleeping for 7s. Reason: RUNNING
2024-07-11 10:39:54,545 Sleeping for 7s. Reason: RUNNING
2024-07-11 10:40:01,966 Sleeping for 5s. Reason: RUNNING
2024-07-11 10:40:07,368 Sleeping for 7s. Reason: RUNNING
2024-07-11 10:40:17,848 Setting max_seq=508, max_extra_seq=1732
2024-07-11 10:43:17,923 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=48.1 pTM=0.256 ipTM=0.196
2024-07-11 10:43:29,228 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=48.1 pTM=0.268 ipTM=0.207 tol=6.52
2024-07-11 10:43:40,549 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=48.6 pTM=0.263 ipTM=0.207 tol=3.21
2024-07-11 10:43:51,899 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=48.8 pTM=0.262 ipTM=0.207 tol=2.22
2024-07-11 10:44:03,267 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=48.2 pTM=0.263 ipTM=0.203 tol=1.69
2024-07-11 10:44:14,633 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=48.7 pTM=0.261 ipTM=0.203 tol=2.4
2024-07-11 10:44:26,028 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=48.8 pTM=0.261 ipTM=0.208 tol=3.18
2024-07-11 10:44:37,453 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=49.4 pTM=0.26 ipTM=0.2 tol=3.63
2024-07-11 10:44:48,884 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=49.3 pTM=0.26 ipTM=0.211 tol=3.31
2024-07-11 10:45:00,304 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=49 pTM=0.262 ipTM=0.206 tol=2.45
2024-07-11 10:45:11,730 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=49.2 pTM=0.263 ipTM=0.217 tol=2.29
2024-07-11 10:45:23,149 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=49.3 pTM=0.264 ipTM=0.214 tol=1.86
2024-07-11 10:45:34,566 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=49.1 pTM=0.264 ipTM=0.213 tol=1.75
2024-07-11 10:45:46,007 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=49.6 pTM=0.263 ipTM=0.207 tol=1.65
2024-07-11 10:45:57,447 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=50.4 pTM=0.261 ipTM=0.219 tol=1.5
2024-07-11 10:46:08,877 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=49.7 pTM=0.263 ipTM=0.223 tol=1.29
2024-07-11 10:46:20,301 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=49.4 pTM=0.263 ipTM=0.214 tol=1.27
2024-07-11 10:46:31,730 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=49.4 pTM=0.263 ipTM=0.22 tol=1.16
2024-07-11 10:46:43,167 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=49.2 pTM=0.263 ipTM=0.213 tol=1.15
2024-07-11 10:46:54,604 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=49.1 pTM=0.264 ipTM=0.21 tol=1.44
2024-07-11 10:47:06,043 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=49.4 pTM=0.263 ipTM=0.213 tol=1.28
2024-07-11 10:47:17,492 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=49.4 pTM=0.263 ipTM=0.215 tol=1.41
2024-07-11 10:47:28,941 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=48.9 pTM=0.263 ipTM=0.209 tol=1.17
2024-07-11 10:47:40,377 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=49.1 pTM=0.264 ipTM=0.224 tol=1.87
2024-07-11 10:47:51,825 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=48.8 pTM=0.263 ipTM=0.213 tol=1.34
2024-07-11 10:48:03,281 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=48.9 pTM=0.264 ipTM=0.215 tol=1.44
2024-07-11 10:48:14,705 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=49 pTM=0.264 ipTM=0.215 tol=1.16
2024-07-11 10:48:26,120 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=48.8 pTM=0.265 ipTM=0.212 tol=1.2
2024-07-11 10:48:37,581 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=49 pTM=0.266 ipTM=0.211 tol=2.44
2024-07-11 10:48:49,032 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=49 pTM=0.264 ipTM=0.211 tol=2.13
2024-07-11 10:49:00,489 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=48.7 pTM=0.265 ipTM=0.219 tol=1.53
2024-07-11 10:49:00,490 alphafold2_multimer_v3_model_1_seed_000 took 516.5s (30 recycles)
2024-07-11 10:49:12,305 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=48.8 pTM=0.258 ipTM=0.205
2024-07-11 10:49:23,776 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=48.5 pTM=0.266 ipTM=0.227 tol=4.19
2024-07-11 10:49:35,231 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=48.2 pTM=0.264 ipTM=0.218 tol=2.51
2024-07-11 10:49:46,667 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=49.2 pTM=0.263 ipTM=0.228 tol=1.99
2024-07-11 10:49:58,095 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=49.3 pTM=0.263 ipTM=0.223 tol=1.1
2024-07-11 10:50:09,554 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=49.7 pTM=0.262 ipTM=0.225 tol=1.08
2024-07-11 10:50:21,008 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=49.3 pTM=0.263 ipTM=0.223 tol=1.15
2024-07-11 10:50:32,463 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=50 pTM=0.261 ipTM=0.229 tol=1.73
2024-07-11 10:50:43,917 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=49.7 pTM=0.262 ipTM=0.226 tol=1.72
2024-07-11 10:50:55,359 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=50 pTM=0.267 ipTM=0.238 tol=2.55
2024-07-11 10:51:06,798 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=49.5 pTM=0.271 ipTM=0.226 tol=1.54
2024-07-11 10:51:18,232 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=49.8 pTM=0.272 ipTM=0.227 tol=1.27
2024-07-11 10:51:29,662 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=49.8 pTM=0.274 ipTM=0.229 tol=1.43
2024-07-11 10:51:41,091 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=50.1 pTM=0.278 ipTM=0.228 tol=1.12
2024-07-11 10:51:52,541 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=51 pTM=0.283 ipTM=0.246 tol=1.46
2024-07-11 10:52:03,981 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=50.5 pTM=0.284 ipTM=0.25 tol=1.07
2024-07-11 10:52:15,415 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=50.9 pTM=0.292 ipTM=0.287 tol=1.04
2024-07-11 10:52:26,840 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=50.2 pTM=0.295 ipTM=0.29 tol=1.18
2024-07-11 10:52:38,292 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=50.7 pTM=0.295 ipTM=0.291 tol=0.666
2024-07-11 10:52:49,735 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=50.4 pTM=0.294 ipTM=0.288 tol=1.13
2024-07-11 10:53:01,175 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=50.9 pTM=0.292 ipTM=0.278 tol=0.996
2024-07-11 10:53:12,601 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=51 pTM=0.296 ipTM=0.297 tol=1.91
2024-07-11 10:53:24,042 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=50.7 pTM=0.292 ipTM=0.277 tol=1.18
2024-07-11 10:53:35,490 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=51.1 pTM=0.293 ipTM=0.284 tol=1.46
2024-07-11 10:53:46,930 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=51.1 pTM=0.293 ipTM=0.283 tol=1.87
2024-07-11 10:53:58,371 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=51 pTM=0.298 ipTM=0.304 tol=1.33
2024-07-11 10:54:09,813 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=51.2 pTM=0.297 ipTM=0.292 tol=1.08
2024-07-11 10:54:21,255 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=51 pTM=0.3 ipTM=0.306 tol=1.18
2024-07-11 10:54:32,689 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=51.2 pTM=0.298 ipTM=0.295 tol=1.09
2024-07-11 10:54:44,117 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=50.7 pTM=0.294 ipTM=0.281 tol=1.4
2024-07-11 10:54:55,559 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=50.8 pTM=0.297 ipTM=0.291 tol=1.09
2024-07-11 10:54:55,560 alphafold2_multimer_v3_model_2_seed_000 took 354.7s (30 recycles)
2024-07-11 10:55:07,437 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=45.5 pTM=0.254 ipTM=0.195
2024-07-11 10:55:18,916 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=44.2 pTM=0.264 ipTM=0.205 tol=15.4
2024-07-11 10:55:30,371 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=45.2 pTM=0.258 ipTM=0.21 tol=7.76
2024-07-11 10:55:41,836 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=45.8 pTM=0.256 ipTM=0.198 tol=5.88
2024-07-11 10:55:53,288 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=45.5 pTM=0.263 ipTM=0.21 tol=4.21
2024-07-11 10:56:04,733 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=46 pTM=0.275 ipTM=0.216 tol=1.96
2024-07-11 10:56:16,186 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=45.9 pTM=0.275 ipTM=0.212 tol=1.98
2024-07-11 10:56:27,647 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=46.5 pTM=0.289 ipTM=0.272 tol=1.2
2024-07-11 10:56:39,116 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=46 pTM=0.283 ipTM=0.239 tol=1.19
2024-07-11 10:56:50,568 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=45.9 pTM=0.287 ipTM=0.252 tol=1.37
2024-07-11 10:57:02,026 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=45.9 pTM=0.282 ipTM=0.234 tol=1.17
2024-07-11 10:57:13,485 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=46 pTM=0.292 ipTM=0.276 tol=1.11
2024-07-11 10:57:24,975 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=45.6 pTM=0.285 ipTM=0.24 tol=1.49
2024-07-11 10:57:36,443 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=45.9 pTM=0.292 ipTM=0.276 tol=1.04
2024-07-11 10:57:47,923 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=46.8 pTM=0.284 ipTM=0.244 tol=0.887
2024-07-11 10:57:59,388 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=46.3 pTM=0.291 ipTM=0.273 tol=0.614
2024-07-11 10:58:10,826 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=46.2 pTM=0.284 ipTM=0.24 tol=0.785
2024-07-11 10:58:22,301 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=46 pTM=0.292 ipTM=0.273 tol=1.22
2024-07-11 10:58:33,757 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=46 pTM=0.286 ipTM=0.244 tol=1.47
2024-07-11 10:58:45,222 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=46 pTM=0.29 ipTM=0.266 tol=1.18
2024-07-11 10:58:56,682 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=46.7 pTM=0.286 ipTM=0.246 tol=0.91
2024-07-11 10:59:08,111 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=46.3 pTM=0.287 ipTM=0.255 tol=0.875
2024-07-11 10:59:19,588 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=46 pTM=0.286 ipTM=0.245 tol=0.833
2024-07-11 10:59:31,054 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=45.8 pTM=0.287 ipTM=0.255 tol=0.927
2024-07-11 10:59:42,500 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=45.7 pTM=0.286 ipTM=0.25 tol=1.23
2024-07-11 10:59:53,953 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=46.1 pTM=0.289 ipTM=0.26 tol=1.03
2024-07-11 11:00:05,416 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=46.1 pTM=0.288 ipTM=0.25 tol=0.817
2024-07-11 11:00:16,866 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=45.8 pTM=0.294 ipTM=0.277 tol=0.908
2024-07-11 11:00:28,324 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=46.2 pTM=0.285 ipTM=0.24 tol=0.688
2024-07-11 11:00:39,783 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=45.9 pTM=0.296 ipTM=0.284 tol=0.799
2024-07-11 11:00:51,246 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=45.8 pTM=0.287 ipTM=0.246 tol=2
2024-07-11 11:00:51,247 alphafold2_multimer_v3_model_3_seed_000 took 355.3s (30 recycles)
2024-07-11 11:01:03,096 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=48.9 pTM=0.26 ipTM=0.198
2024-07-11 11:01:14,570 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=50 pTM=0.264 ipTM=0.201 tol=13.3
2024-07-11 11:01:26,044 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=50.9 pTM=0.262 ipTM=0.205 tol=6.42
2024-07-11 11:01:37,523 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=51.7 pTM=0.266 ipTM=0.207 tol=2.15
2024-07-11 11:01:48,993 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=50.6 pTM=0.265 ipTM=0.213 tol=5.03
2024-07-11 11:02:00,462 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=51.2 pTM=0.266 ipTM=0.209 tol=4.85
2024-07-11 11:02:11,931 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=51.2 pTM=0.266 ipTM=0.214 tol=3.04
2024-07-11 11:02:23,412 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=52.1 pTM=0.266 ipTM=0.217 tol=1.57
2024-07-11 11:02:34,875 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=51.8 pTM=0.266 ipTM=0.22 tol=1.89
2024-07-11 11:02:46,308 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=51.6 pTM=0.267 ipTM=0.22 tol=1.67
2024-07-11 11:02:57,796 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=51.8 pTM=0.267 ipTM=0.216 tol=2.24
2024-07-11 11:03:09,283 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=52 pTM=0.266 ipTM=0.221 tol=2.04
2024-07-11 11:03:20,742 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=51.4 pTM=0.267 ipTM=0.215 tol=1.52
2024-07-11 11:03:32,229 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=51.9 pTM=0.268 ipTM=0.214 tol=3.27
2024-07-11 11:03:43,677 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=51.9 pTM=0.266 ipTM=0.216 tol=3.21
2024-07-11 11:03:55,140 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=51.8 pTM=0.267 ipTM=0.209 tol=1.25
2024-07-11 11:04:06,589 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=51.7 pTM=0.267 ipTM=0.216 tol=1.17
2024-07-11 11:04:18,052 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=51.6 pTM=0.265 ipTM=0.214 tol=1.27
2024-07-11 11:04:29,517 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=51.7 pTM=0.266 ipTM=0.22 tol=1.39
2024-07-11 11:04:40,998 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=51.8 pTM=0.266 ipTM=0.22 tol=1.99
2024-07-11 11:04:52,468 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=52.2 pTM=0.266 ipTM=0.214 tol=2.43
2024-07-11 11:05:03,931 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=51.9 pTM=0.264 ipTM=0.215 tol=2.56
2024-07-11 11:05:15,407 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=51.9 pTM=0.265 ipTM=0.218 tol=1.94
2024-07-11 11:05:26,885 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=51.8 pTM=0.263 ipTM=0.217 tol=1.27
2024-07-11 11:05:38,360 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=51.8 pTM=0.263 ipTM=0.222 tol=0.933
2024-07-11 11:05:49,812 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=51.5 pTM=0.264 ipTM=0.217 tol=0.908
2024-07-11 11:06:01,274 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=52 pTM=0.262 ipTM=0.22 tol=1.59
2024-07-11 11:06:12,745 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=52 pTM=0.265 ipTM=0.222 tol=1.66
2024-07-11 11:06:24,216 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=52.1 pTM=0.263 ipTM=0.221 tol=1.07
2024-07-11 11:06:35,677 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=51.4 pTM=0.262 ipTM=0.218 tol=0.886
2024-07-11 11:06:47,143 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=51.8 pTM=0.264 ipTM=0.218 tol=1.5
2024-07-11 11:06:47,144 alphafold2_multimer_v3_model_4_seed_000 took 355.5s (30 recycles)
2024-07-11 11:06:58,983 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=45.8 pTM=0.257 ipTM=0.238
2024-07-11 11:07:10,443 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=46.4 pTM=0.254 ipTM=0.224 tol=8.42
2024-07-11 11:07:21,898 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=46.8 pTM=0.256 ipTM=0.223 tol=4.44
2024-07-11 11:07:33,359 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=46.8 pTM=0.257 ipTM=0.217 tol=2.46
2024-07-11 11:07:44,831 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=46.6 pTM=0.265 ipTM=0.223 tol=3.22
2024-07-11 11:07:56,298 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=46.7 pTM=0.269 ipTM=0.221 tol=1.97
2024-07-11 11:08:07,772 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=46.7 pTM=0.271 ipTM=0.22 tol=1.52
2024-07-11 11:08:19,192 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=47 pTM=0.279 ipTM=0.234 tol=1.88
2024-07-11 11:08:30,641 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=46.9 pTM=0.284 ipTM=0.234 tol=1.41
2024-07-11 11:08:42,083 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=46.7 pTM=0.277 ipTM=0.224 tol=1.22
2024-07-11 11:08:53,541 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=46.8 pTM=0.278 ipTM=0.217 tol=1.16
2024-07-11 11:09:04,985 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=46.8 pTM=0.286 ipTM=0.254 tol=1.83
2024-07-11 11:09:16,431 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=46.8 pTM=0.287 ipTM=0.246 tol=1.55
2024-07-11 11:09:27,871 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=47.1 pTM=0.283 ipTM=0.24 tol=1.42
2024-07-11 11:09:39,313 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=46.6 pTM=0.278 ipTM=0.22 tol=5.07
2024-07-11 11:09:50,748 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=47.4 pTM=0.275 ipTM=0.226 tol=4.84
2024-07-11 11:10:02,181 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=47.4 pTM=0.289 ipTM=0.266 tol=2.34
2024-07-11 11:10:13,600 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=47.3 pTM=0.289 ipTM=0.252 tol=1.44
2024-07-11 11:10:25,032 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=47.3 pTM=0.286 ipTM=0.256 tol=1.28
2024-07-11 11:10:36,470 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=47.6 pTM=0.286 ipTM=0.244 tol=1.18
2024-07-11 11:10:47,901 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=47.4 pTM=0.286 ipTM=0.252 tol=1.07
2024-07-11 11:10:59,340 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=47.6 pTM=0.292 ipTM=0.269 tol=0.723
2024-07-11 11:11:10,780 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=47.2 pTM=0.283 ipTM=0.237 tol=1.82
2024-07-11 11:11:22,216 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=46.9 pTM=0.281 ipTM=0.226 tol=1.39
2024-07-11 11:11:33,643 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=47.6 pTM=0.29 ipTM=0.271 tol=1.58
2024-07-11 11:11:45,068 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=47.2 pTM=0.286 ipTM=0.243 tol=1.13
2024-07-11 11:11:56,499 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=47.4 pTM=0.283 ipTM=0.241 tol=0.997
2024-07-11 11:12:07,931 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=47.1 pTM=0.288 ipTM=0.258 tol=1.03
2024-07-11 11:12:19,364 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=47.7 pTM=0.292 ipTM=0.277 tol=1.07
2024-07-11 11:12:30,793 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=47.1 pTM=0.289 ipTM=0.263 tol=0.798
2024-07-11 11:12:42,229 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=47.4 pTM=0.293 ipTM=0.275 tol=1.9
2024-07-11 11:12:42,230 alphafold2_multimer_v3_model_5_seed_000 took 354.7s (30 recycles)
2024-07-11 11:12:42,598 reranking models by 'multimer' metric
2024-07-11 11:12:46,000 Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
2024-07-11 11:14:00,487 Relaxation took 77.9s
2024-07-11 11:14:00,487 rank_001_alphafold2_multimer_v3_model_2_seed_000 pLDDT=50.8 pTM=0.297 ipTM=0.291
2024-07-11 11:14:38,934 Relaxation took 38.4s
2024-07-11 11:14:38,934 rank_002_alphafold2_multimer_v3_model_5_seed_000 pLDDT=47.4 pTM=0.293 ipTM=0.275
2024-07-11 11:15:53,236 Relaxation took 74.3s
2024-07-11 11:15:53,236 rank_003_alphafold2_multimer_v3_model_3_seed_000 pLDDT=45.8 pTM=0.287 ipTM=0.246
2024-07-11 11:17:16,470 Relaxation took 83.2s
2024-07-11 11:17:16,470 rank_004_alphafold2_multimer_v3_model_1_seed_000 pLDDT=48.7 pTM=0.265 ipTM=0.219
2024-07-11 11:18:27,840 Relaxation took 71.4s
2024-07-11 11:18:27,840 rank_005_alphafold2_multimer_v3_model_4_seed_000 pLDDT=51.8 pTM=0.264 ipTM=0.218
2024-07-11 11:18:29,274 Done