2024-07-11 11:19:05,127 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3)
2024-07-11 11:19:05,450 Running on GPU
2024-07-11 11:19:09,026 Found 6 citations for tools or databases
2024-07-11 11:19:09,026 Query 1/1: MTF2_CR1 (length 2632)
2024-07-11 11:19:09,462 Sleeping for 9s. Reason: PENDING
2024-07-11 11:19:18,875 Sleeping for 7s. Reason: RUNNING
2024-07-11 11:19:26,266 Sleeping for 7s. Reason: RUNNING
2024-07-11 11:19:33,680 Sleeping for 8s. Reason: RUNNING
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2024-07-11 11:20:18,155 Sleeping for 8s. Reason: RUNNING
2024-07-11 11:20:26,556 Sleeping for 10s. Reason: RUNNING
2024-07-11 11:20:36,979 Sleeping for 5s. Reason: RUNNING
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2024-07-11 11:20:57,183 Sleeping for 7s. Reason: RUNNING
2024-07-11 11:21:04,609 Sleeping for 8s. Reason: RUNNING
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2024-07-11 11:21:42,680 Sleeping for 6s. Reason: RUNNING
2024-07-11 11:21:49,087 Sleeping for 7s. Reason: RUNNING
2024-07-11 11:21:56,490 Sleeping for 10s. Reason: RUNNING
2024-07-11 11:22:06,895 Sleeping for 9s. Reason: RUNNING
2024-07-11 11:22:16,294 Sleeping for 8s. Reason: RUNNING
2024-07-11 11:22:24,699 Sleeping for 9s. Reason: RUNNING
2024-07-11 11:22:34,105 Sleeping for 6s. Reason: RUNNING
2024-07-11 11:22:40,513 Sleeping for 6s. Reason: RUNNING
2024-07-11 11:22:46,916 Sleeping for 10s. Reason: RUNNING
2024-07-11 11:22:59,188 Sleeping for 7s. Reason: PENDING
2024-07-11 11:23:06,599 Sleeping for 9s. Reason: RUNNING
2024-07-11 11:23:16,008 Sleeping for 10s. Reason: RUNNING
2024-07-11 11:23:26,407 Sleeping for 7s. Reason: RUNNING
2024-07-11 11:23:33,818 Sleeping for 5s. Reason: RUNNING
2024-07-11 11:23:39,236 Sleeping for 7s. Reason: RUNNING
2024-07-11 11:23:46,631 Sleeping for 9s. Reason: RUNNING
2024-07-11 11:23:56,051 Sleeping for 5s. Reason: RUNNING
2024-07-11 11:24:01,473 Sleeping for 8s. Reason: RUNNING
2024-07-11 11:24:09,880 Sleeping for 7s. Reason: RUNNING
2024-07-11 11:24:17,281 Sleeping for 5s. Reason: RUNNING
2024-07-11 11:24:22,693 Sleeping for 6s. Reason: RUNNING
2024-07-11 11:24:29,101 Sleeping for 5s. Reason: RUNNING
2024-07-11 11:24:34,518 Sleeping for 5s. Reason: RUNNING
2024-07-11 11:24:39,931 Sleeping for 7s. Reason: RUNNING
2024-07-11 11:24:47,339 Sleeping for 7s. Reason: RUNNING
2024-07-11 11:24:54,747 Sleeping for 9s. Reason: RUNNING
2024-07-11 11:25:04,168 Sleeping for 5s. Reason: RUNNING
2024-07-11 11:25:09,572 Sleeping for 7s. Reason: RUNNING
2024-07-11 11:25:16,969 Sleeping for 7s. Reason: RUNNING
2024-07-11 11:25:24,393 Sleeping for 9s. Reason: RUNNING
2024-07-11 11:25:33,793 Sleeping for 6s. Reason: RUNNING
2024-07-11 11:25:40,190 Sleeping for 6s. Reason: RUNNING
2024-07-11 11:25:46,589 Sleeping for 5s. Reason: RUNNING
2024-07-11 11:25:51,996 Sleeping for 7s. Reason: RUNNING
2024-07-11 11:26:05,487 Setting max_seq=508, max_extra_seq=2048
2024-07-11 11:34:12,625 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=59 pTM=0.298 ipTM=0.221
2024-07-11 11:40:10,859 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=57.1 pTM=0.315 ipTM=0.231 tol=17.8
2024-07-11 11:46:09,027 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=56.5 pTM=0.313 ipTM=0.231 tol=9.03
2024-07-11 11:52:07,190 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=57 pTM=0.312 ipTM=0.23 tol=6.62
2024-07-11 11:58:05,285 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=56.8 pTM=0.313 ipTM=0.231 tol=6.9
2024-07-11 12:04:03,308 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=56.2 pTM=0.312 ipTM=0.231 tol=8.61
2024-07-11 12:10:01,322 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=56.3 pTM=0.313 ipTM=0.232 tol=7.16
2024-07-11 12:15:59,360 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=56.2 pTM=0.312 ipTM=0.23 tol=6.11
2024-07-11 12:21:57,426 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=56.2 pTM=0.313 ipTM=0.232 tol=5.66
2024-07-11 12:27:55,462 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=56.6 pTM=0.312 ipTM=0.231 tol=5.7
2024-07-11 12:33:53,536 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=56.8 pTM=0.313 ipTM=0.232 tol=4.59
2024-07-11 12:39:51,525 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=56.5 pTM=0.313 ipTM=0.233 tol=3.06
2024-07-11 12:45:49,477 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=56.2 pTM=0.313 ipTM=0.233 tol=3.66
2024-07-11 12:51:47,470 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=56 pTM=0.313 ipTM=0.233 tol=5.3
2024-07-11 12:57:45,473 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=55.7 pTM=0.314 ipTM=0.233 tol=5.76
2024-07-11 13:03:43,560 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=56.5 pTM=0.312 ipTM=0.232 tol=5.06
2024-07-11 13:09:41,643 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=56.8 pTM=0.312 ipTM=0.231 tol=5.19
2024-07-11 13:15:39,721 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=56.5 pTM=0.311 ipTM=0.231 tol=5.5
2024-07-11 13:21:37,760 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=56.8 pTM=0.311 ipTM=0.231 tol=4.22
2024-07-11 13:27:35,818 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=57.1 pTM=0.312 ipTM=0.23 tol=6.93
2024-07-11 13:33:33,845 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=56.4 pTM=0.312 ipTM=0.231 tol=5.11
2024-07-11 13:39:31,871 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=56.9 pTM=0.312 ipTM=0.232 tol=5.77
2024-07-11 13:45:30,006 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=56.5 pTM=0.312 ipTM=0.231 tol=5.99
2024-07-11 13:51:28,044 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=56.7 pTM=0.31 ipTM=0.228 tol=7.7
2024-07-11 13:57:26,097 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=56.5 pTM=0.31 ipTM=0.229 tol=5.09
2024-07-11 14:03:24,104 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=56.4 pTM=0.311 ipTM=0.232 tol=4.09
2024-07-11 14:09:22,191 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=56.6 pTM=0.311 ipTM=0.232 tol=3.9
2024-07-11 14:15:20,329 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=57 pTM=0.31 ipTM=0.23 tol=4.79
2024-07-11 14:21:18,527 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=56.4 pTM=0.31 ipTM=0.23 tol=4.47
2024-07-11 14:27:16,672 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=56.2 pTM=0.311 ipTM=0.231 tol=2.94
2024-07-11 14:33:14,799 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=56.6 pTM=0.312 ipTM=0.232 tol=5.62
2024-07-11 14:33:14,802 alphafold2_multimer_v3_model_1_seed_000 took 11225.7s (30 recycles)
2024-07-11 14:39:18,116 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=57.6 pTM=0.3 ipTM=0.229
2024-07-11 14:45:17,124 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=58.3 pTM=0.302 ipTM=0.222 tol=23.5
2024-07-11 14:51:15,941 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=59.3 pTM=0.301 ipTM=0.221 tol=15.5
2024-07-11 14:57:14,750 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=60 pTM=0.301 ipTM=0.221 tol=9.88
2024-07-11 15:03:13,636 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=60.1 pTM=0.3 ipTM=0.219 tol=11.5
2024-07-11 15:09:12,468 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=60.5 pTM=0.3 ipTM=0.217 tol=8.14
2024-07-11 15:15:11,426 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=60.8 pTM=0.298 ipTM=0.22 tol=10.8
2024-07-11 15:21:10,351 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=60.9 pTM=0.299 ipTM=0.225 tol=8.84
2024-07-11 15:27:09,289 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=60.8 pTM=0.299 ipTM=0.223 tol=8.59
2024-07-11 15:33:08,422 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=61.7 pTM=0.299 ipTM=0.224 tol=11
2024-07-11 15:39:07,545 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=61.8 pTM=0.298 ipTM=0.222 tol=6.91
2024-07-11 15:45:06,581 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=61.5 pTM=0.301 ipTM=0.223 tol=5.68
2024-07-11 15:51:05,566 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=61.4 pTM=0.3 ipTM=0.224 tol=5.91
2024-07-11 15:57:04,572 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=61.8 pTM=0.3 ipTM=0.223 tol=4.88
2024-07-11 16:03:03,601 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=61.8 pTM=0.3 ipTM=0.222 tol=3.28
2024-07-11 16:09:02,674 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=61.8 pTM=0.3 ipTM=0.22 tol=5.13
2024-07-11 16:15:01,770 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=61.8 pTM=0.301 ipTM=0.222 tol=4.88
2024-07-11 16:21:00,731 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=62 pTM=0.301 ipTM=0.221 tol=5.7
2024-07-11 16:26:59,820 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=62 pTM=0.301 ipTM=0.223 tol=3.17
2024-07-11 16:32:58,821 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=62.1 pTM=0.301 ipTM=0.221 tol=5.19
2024-07-11 16:38:57,781 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=61.5 pTM=0.301 ipTM=0.223 tol=3.58
2024-07-11 16:44:56,776 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=61.6 pTM=0.302 ipTM=0.222 tol=6.27
2024-07-11 16:50:55,862 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=61.5 pTM=0.302 ipTM=0.223 tol=5.62
2024-07-11 16:56:54,855 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=61.9 pTM=0.302 ipTM=0.224 tol=6.56
2024-07-11 17:02:53,894 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=61.6 pTM=0.302 ipTM=0.224 tol=6.61
2024-07-11 17:08:52,871 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=61.3 pTM=0.302 ipTM=0.224 tol=6.12
2024-07-11 17:14:51,798 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=60.9 pTM=0.302 ipTM=0.227 tol=5.23
2024-07-11 17:20:50,756 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=61.2 pTM=0.303 ipTM=0.225 tol=5
2024-07-11 17:26:49,640 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=61 pTM=0.303 ipTM=0.225 tol=5.49
2024-07-11 17:32:48,690 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=61.5 pTM=0.302 ipTM=0.226 tol=5.08
2024-07-11 17:38:47,801 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=61.3 pTM=0.302 ipTM=0.223 tol=4.83
2024-07-11 17:38:47,805 alphafold2_multimer_v3_model_2_seed_000 took 11129.0s (30 recycles)
2024-07-11 17:44:50,987 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=55.6 pTM=0.298 ipTM=0.231
2024-07-11 17:50:50,457 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=55.8 pTM=0.299 ipTM=0.233 tol=29
2024-07-11 17:56:49,542 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=56.6 pTM=0.302 ipTM=0.233 tol=15.1
2024-07-11 18:02:48,639 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=57.8 pTM=0.302 ipTM=0.236 tol=9.55
2024-07-11 18:08:47,651 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=59.1 pTM=0.303 ipTM=0.232 tol=7.25
2024-07-11 18:14:46,505 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=59.3 pTM=0.305 ipTM=0.232 tol=5.2
2024-07-11 18:20:45,276 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=59.3 pTM=0.304 ipTM=0.231 tol=3.6
2024-07-11 18:26:44,044 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=59.4 pTM=0.304 ipTM=0.232 tol=4.95
2024-07-11 18:32:42,855 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=60 pTM=0.305 ipTM=0.23 tol=7.06
2024-07-11 18:38:41,741 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=60.4 pTM=0.304 ipTM=0.231 tol=4.92
2024-07-11 18:44:40,663 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=60.6 pTM=0.303 ipTM=0.231 tol=5.37
2024-07-11 18:50:39,578 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=60.6 pTM=0.303 ipTM=0.232 tol=3.52
2024-07-11 18:56:38,524 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=60.8 pTM=0.303 ipTM=0.231 tol=2.61
2024-07-11 19:02:37,413 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=60.6 pTM=0.303 ipTM=0.233 tol=3.34
2024-07-11 19:08:36,298 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=60.7 pTM=0.303 ipTM=0.232 tol=2.48
2024-07-11 19:14:35,151 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=60.8 pTM=0.303 ipTM=0.232 tol=2.14
2024-07-11 19:20:33,998 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=60.9 pTM=0.303 ipTM=0.23 tol=2.29
2024-07-11 19:26:32,869 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=60.8 pTM=0.302 ipTM=0.23 tol=2.54
2024-07-11 19:32:31,716 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=60.7 pTM=0.304 ipTM=0.23 tol=1.51
2024-07-11 19:38:30,551 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=60.8 pTM=0.302 ipTM=0.231 tol=3.01
2024-07-11 19:44:29,337 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=60.7 pTM=0.304 ipTM=0.229 tol=1.63
2024-07-11 19:50:28,140 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=61 pTM=0.303 ipTM=0.231 tol=1.83
2024-07-11 19:56:26,907 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=61 pTM=0.303 ipTM=0.229 tol=6.17
2024-07-11 20:02:25,698 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=60.8 pTM=0.303 ipTM=0.23 tol=6.47
2024-07-11 20:08:24,430 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=60.8 pTM=0.303 ipTM=0.229 tol=1.91
2024-07-11 20:14:23,239 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=60.8 pTM=0.303 ipTM=0.228 tol=1.6
2024-07-11 20:20:22,025 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=60.5 pTM=0.304 ipTM=0.229 tol=1.68
2024-07-11 20:26:20,848 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=60.6 pTM=0.303 ipTM=0.23 tol=1.56
2024-07-11 20:32:19,611 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=60.7 pTM=0.303 ipTM=0.231 tol=1.62
2024-07-11 20:38:18,391 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=60.4 pTM=0.303 ipTM=0.232 tol=1.65
2024-07-11 20:44:17,196 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=60.5 pTM=0.303 ipTM=0.231 tol=1.54
2024-07-11 20:44:17,200 alphafold2_multimer_v3_model_3_seed_000 took 11125.5s (30 recycles)
2024-07-11 20:50:20,735 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=53.6 pTM=0.29 ipTM=0.212
2024-07-11 20:56:20,277 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=55.3 pTM=0.291 ipTM=0.224 tol=21.2
2024-07-11 21:02:19,780 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=56.5 pTM=0.295 ipTM=0.227 tol=11.9
2024-07-11 21:08:19,141 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=56.5 pTM=0.297 ipTM=0.237 tol=7.45
2024-07-11 21:14:18,360 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=56.8 pTM=0.3 ipTM=0.24 tol=5.96
2024-07-11 21:20:17,585 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=56.9 pTM=0.299 ipTM=0.239 tol=4.51
2024-07-11 21:26:16,801 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=57.1 pTM=0.299 ipTM=0.238 tol=3.59
2024-07-11 21:32:16,114 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=56.8 pTM=0.297 ipTM=0.236 tol=4.75
2024-07-11 21:38:15,328 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=56.8 pTM=0.299 ipTM=0.237 tol=4.18
2024-07-11 21:44:14,530 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=57.2 pTM=0.298 ipTM=0.239 tol=3.65
2024-07-11 21:50:13,753 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=57.4 pTM=0.298 ipTM=0.238 tol=4.59
2024-07-11 21:56:12,965 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=57 pTM=0.299 ipTM=0.24 tol=4.08
2024-07-11 22:02:12,129 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=57.3 pTM=0.299 ipTM=0.24 tol=3.35
2024-07-11 22:08:11,374 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=57.1 pTM=0.298 ipTM=0.24 tol=3.95
2024-07-11 22:14:10,550 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=57 pTM=0.298 ipTM=0.24 tol=5.12
2024-07-11 22:20:09,768 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=57.2 pTM=0.299 ipTM=0.239 tol=3.19
2024-07-11 22:26:09,091 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=57.5 pTM=0.298 ipTM=0.239 tol=6.76
2024-07-11 22:32:08,377 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=57.3 pTM=0.298 ipTM=0.241 tol=5.31
2024-07-11 22:38:07,709 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=57.2 pTM=0.298 ipTM=0.239 tol=4.54
2024-07-11 22:44:06,949 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=57.3 pTM=0.299 ipTM=0.239 tol=3.68
2024-07-11 22:50:06,154 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=57.3 pTM=0.299 ipTM=0.238 tol=4.9
2024-07-11 22:56:05,445 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=57.2 pTM=0.299 ipTM=0.241 tol=6.21
2024-07-11 23:02:04,812 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=57.2 pTM=0.298 ipTM=0.239 tol=4.9
2024-07-11 23:08:04,160 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=57.4 pTM=0.298 ipTM=0.238 tol=3.95
2024-07-11 23:14:03,461 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=57.4 pTM=0.298 ipTM=0.239 tol=3.57
2024-07-11 23:20:02,660 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=57.3 pTM=0.299 ipTM=0.24 tol=3.61
2024-07-11 23:26:01,921 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=57.2 pTM=0.299 ipTM=0.24 tol=3.93
2024-07-11 23:32:01,214 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=57.2 pTM=0.299 ipTM=0.241 tol=5.22
2024-07-11 23:38:00,479 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=57 pTM=0.298 ipTM=0.24 tol=4.05
2024-07-11 23:43:59,742 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=57 pTM=0.299 ipTM=0.24 tol=3.63
2024-07-11 23:49:59,061 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=57.1 pTM=0.298 ipTM=0.239 tol=3.59
2024-07-11 23:49:59,065 alphafold2_multimer_v3_model_4_seed_000 took 11137.9s (30 recycles)
2024-07-11 23:56:01,860 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=56.2 pTM=0.292 ipTM=0.216
2024-07-12 00:02:00,176 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=55.9 pTM=0.301 ipTM=0.226 tol=16.2
2024-07-12 00:07:58,403 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=56.8 pTM=0.302 ipTM=0.231 tol=12.2
2024-07-12 00:13:56,702 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=57.4 pTM=0.3 ipTM=0.233 tol=6.15
2024-07-12 00:19:54,954 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=57.6 pTM=0.302 ipTM=0.234 tol=6.11
2024-07-12 00:25:53,183 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=57.7 pTM=0.301 ipTM=0.235 tol=4.18
2024-07-12 00:31:51,470 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=57.7 pTM=0.3 ipTM=0.233 tol=4.18
2024-07-12 00:37:49,684 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=57.8 pTM=0.3 ipTM=0.237 tol=2.93
2024-07-12 00:43:51,921 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=58 pTM=0.3 ipTM=0.236 tol=2.7
2024-07-12 00:49:50,132 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=57.9 pTM=0.3 ipTM=0.237 tol=3.68
2024-07-12 00:55:48,369 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=58.2 pTM=0.3 ipTM=0.235 tol=5.5
2024-07-12 01:01:46,611 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=58.1 pTM=0.3 ipTM=0.235 tol=4.14
2024-07-12 01:07:44,795 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=58.1 pTM=0.3 ipTM=0.235 tol=3.12
2024-07-12 01:13:42,963 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=58 pTM=0.299 ipTM=0.237 tol=2.68
2024-07-12 01:19:41,145 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=58.1 pTM=0.299 ipTM=0.233 tol=3.71
2024-07-12 01:25:39,262 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=58.3 pTM=0.3 ipTM=0.234 tol=3.76
2024-07-12 01:31:37,392 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=58.2 pTM=0.299 ipTM=0.234 tol=4.42
2024-07-12 01:37:35,550 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=58.2 pTM=0.3 ipTM=0.232 tol=4.08
2024-07-12 01:43:33,658 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=58.1 pTM=0.301 ipTM=0.232 tol=3.06
2024-07-12 01:49:31,794 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=58.3 pTM=0.3 ipTM=0.233 tol=4.05
2024-07-12 01:55:29,886 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=58.5 pTM=0.3 ipTM=0.233 tol=3.86
2024-07-12 02:01:27,991 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=58.3 pTM=0.301 ipTM=0.235 tol=2.68
2024-07-12 02:07:26,120 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=58.4 pTM=0.3 ipTM=0.233 tol=3.09
2024-07-12 02:13:24,304 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=58.3 pTM=0.3 ipTM=0.231 tol=4.02
2024-07-12 02:19:22,426 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=58.1 pTM=0.3 ipTM=0.233 tol=5.18
2024-07-12 02:25:20,599 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=58.2 pTM=0.3 ipTM=0.233 tol=3.98
2024-07-12 02:31:18,805 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=58.2 pTM=0.302 ipTM=0.235 tol=4.3
2024-07-12 02:37:16,948 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=58.3 pTM=0.301 ipTM=0.235 tol=3.37
2024-07-12 02:43:15,124 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=58.1 pTM=0.3 ipTM=0.235 tol=3.44
2024-07-12 02:49:13,178 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=58.2 pTM=0.301 ipTM=0.236 tol=5.2
2024-07-12 02:55:11,366 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=58.5 pTM=0.301 ipTM=0.236 tol=2.7
2024-07-12 02:55:11,369 alphafold2_multimer_v3_model_5_seed_000 took 11108.4s (30 recycles)
2024-07-12 02:55:16,842 reranking models by 'multimer' metric
2024-07-12 02:55:34,969 Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
2024-07-12 03:04:20,867 Relaxation took 544.0s
2024-07-12 03:04:20,868 rank_001_alphafold2_multimer_v3_model_4_seed_000 pLDDT=57.1 pTM=0.298 ipTM=0.239
2024-07-12 03:10:33,560 Relaxation took 372.7s
2024-07-12 03:10:33,561 rank_002_alphafold2_multimer_v3_model_5_seed_000 pLDDT=58.5 pTM=0.301 ipTM=0.236
2024-07-12 03:25:18,633 Relaxation took 885.1s
2024-07-12 03:25:18,633 rank_003_alphafold2_multimer_v3_model_1_seed_000 pLDDT=56.6 pTM=0.312 ipTM=0.232
2024-07-12 03:35:01,541 Relaxation took 579.2s
2024-07-12 03:35:01,542 rank_004_alphafold2_multimer_v3_model_3_seed_000 pLDDT=60.5 pTM=0.303 ipTM=0.231
2024-07-12 03:46:30,187 Relaxation took 688.6s
2024-07-12 03:46:30,187 rank_005_alphafold2_multimer_v3_model_2_seed_000 pLDDT=61.3 pTM=0.302 ipTM=0.223
2024-07-12 03:46:48,397 Done