2024-07-11 12:49:40,552 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3)
2024-07-11 12:49:40,879 Running on GPU
2024-07-11 12:49:44,721 Found 6 citations for tools or databases
2024-07-11 12:49:44,721 Query 1/1: MYBPH_ATP5S (length 677)
2024-07-11 12:49:45,172 Sleeping for 5s. Reason: PENDING
2024-07-11 12:49:50,571 Sleeping for 5s. Reason: RUNNING
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2024-07-11 12:50:39,073 Sleeping for 5s. Reason: RUNNING
2024-07-11 12:50:44,469 Sleeping for 9s. Reason: RUNNING
2024-07-11 12:50:53,877 Sleeping for 10s. Reason: RUNNING
2024-07-11 12:51:04,292 Sleeping for 8s. Reason: RUNNING
2024-07-11 12:51:12,691 Sleeping for 5s. Reason: RUNNING
2024-07-11 12:51:18,105 Sleeping for 8s. Reason: RUNNING
2024-07-11 12:51:26,528 Sleeping for 10s. Reason: RUNNING
2024-07-11 12:51:36,939 Sleeping for 10s. Reason: RUNNING
2024-07-11 12:51:47,339 Sleeping for 10s. Reason: RUNNING
2024-07-11 12:51:57,757 Sleeping for 8s. Reason: RUNNING
2024-07-11 12:52:06,166 Sleeping for 8s. Reason: RUNNING
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2024-07-11 12:52:48,205 Sleeping for 10s. Reason: RUNNING
2024-07-11 12:52:58,605 Sleeping for 5s. Reason: RUNNING
2024-07-11 12:53:04,012 Sleeping for 9s. Reason: RUNNING
2024-07-11 12:53:13,421 Sleeping for 5s. Reason: RUNNING
2024-07-11 12:53:18,831 Sleeping for 7s. Reason: RUNNING
2024-07-11 12:53:26,232 Sleeping for 10s. Reason: RUNNING
2024-07-11 12:53:36,649 Sleeping for 10s. Reason: RUNNING
2024-07-11 12:53:48,704 Sleeping for 9s. Reason: PENDING
2024-07-11 12:53:58,103 Sleeping for 7s. Reason: RUNNING
2024-07-11 12:54:05,504 Sleeping for 10s. Reason: RUNNING
2024-07-11 12:54:15,895 Sleeping for 8s. Reason: RUNNING
2024-07-11 12:54:24,305 Sleeping for 10s. Reason: RUNNING
2024-07-11 12:54:34,728 Sleeping for 6s. Reason: RUNNING
2024-07-11 12:54:41,128 Sleeping for 9s. Reason: RUNNING
2024-07-11 12:54:50,546 Sleeping for 5s. Reason: RUNNING
2024-07-11 12:54:58,151 Setting max_seq=508, max_extra_seq=2048
2024-07-11 12:57:54,444 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=71.6 pTM=0.364 ipTM=0.145
2024-07-11 12:58:03,564 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=69.9 pTM=0.354 ipTM=0.151 tol=11.2
2024-07-11 12:58:12,705 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=71.2 pTM=0.354 ipTM=0.145 tol=6.71
2024-07-11 12:58:21,847 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=72 pTM=0.359 ipTM=0.159 tol=3.89
2024-07-11 12:58:31,007 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=72.3 pTM=0.362 ipTM=0.152 tol=2.02
2024-07-11 12:58:40,176 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=72.4 pTM=0.362 ipTM=0.156 tol=1.86
2024-07-11 12:58:49,359 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=72.5 pTM=0.363 ipTM=0.145 tol=3.51
2024-07-11 12:58:58,551 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=72.1 pTM=0.361 ipTM=0.144 tol=1.96
2024-07-11 12:59:07,751 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=72.7 pTM=0.373 ipTM=0.152 tol=3.05
2024-07-11 12:59:16,953 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=71.8 pTM=0.363 ipTM=0.153 tol=17.5
2024-07-11 12:59:26,158 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=72.1 pTM=0.37 ipTM=0.165 tol=4.73
2024-07-11 12:59:35,365 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=72.2 pTM=0.368 ipTM=0.164 tol=7.22
2024-07-11 12:59:44,562 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=72.8 pTM=0.37 ipTM=0.167 tol=4.48
2024-07-11 12:59:53,768 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=72.8 pTM=0.367 ipTM=0.164 tol=3.72
2024-07-11 13:00:02,974 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=71.1 pTM=0.37 ipTM=0.171 tol=3.83
2024-07-11 13:00:12,186 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=72.1 pTM=0.374 ipTM=0.168 tol=3.48
2024-07-11 13:00:21,401 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=71.7 pTM=0.367 ipTM=0.181 tol=2.69
2024-07-11 13:00:30,618 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=71.8 pTM=0.369 ipTM=0.166 tol=4
2024-07-11 13:00:39,835 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=71.4 pTM=0.371 ipTM=0.174 tol=3.7
2024-07-11 13:00:49,058 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=71.6 pTM=0.367 ipTM=0.167 tol=4.19
2024-07-11 13:00:58,275 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=71.6 pTM=0.371 ipTM=0.17 tol=4.07
2024-07-11 13:01:07,500 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=71.9 pTM=0.367 ipTM=0.163 tol=2.13
2024-07-11 13:01:16,728 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=72.2 pTM=0.369 ipTM=0.162 tol=2.6
2024-07-11 13:01:25,957 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=72.4 pTM=0.37 ipTM=0.17 tol=3.24
2024-07-11 13:01:35,177 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=71.6 pTM=0.37 ipTM=0.174 tol=6.54
2024-07-11 13:01:44,403 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=72.3 pTM=0.371 ipTM=0.168 tol=5.32
2024-07-11 13:01:53,622 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=71.7 pTM=0.374 ipTM=0.173 tol=3.05
2024-07-11 13:02:02,841 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=71.9 pTM=0.375 ipTM=0.177 tol=3.88
2024-07-11 13:02:12,065 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=71.8 pTM=0.369 ipTM=0.162 tol=2.04
2024-07-11 13:02:21,290 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=71.6 pTM=0.368 ipTM=0.168 tol=3.1
2024-07-11 13:02:30,514 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=71 pTM=0.365 ipTM=0.167 tol=4.55
2024-07-11 13:02:30,515 alphafold2_multimer_v3_model_1_seed_000 took 447.1s (30 recycles)
2024-07-11 13:02:40,030 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=72.8 pTM=0.363 ipTM=0.152
2024-07-11 13:02:49,265 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=74.6 pTM=0.379 ipTM=0.177 tol=9.95
2024-07-11 13:02:58,510 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=75 pTM=0.382 ipTM=0.186 tol=5.55
2024-07-11 13:03:07,752 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=74.7 pTM=0.38 ipTM=0.17 tol=3.56
2024-07-11 13:03:16,988 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=74.5 pTM=0.372 ipTM=0.155 tol=2.7
2024-07-11 13:03:26,223 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=75.7 pTM=0.383 ipTM=0.195 tol=4.48
2024-07-11 13:03:35,456 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=76.6 pTM=0.388 ipTM=0.378 tol=2.33
2024-07-11 13:03:44,673 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=77.2 pTM=0.393 ipTM=0.543 tol=2.31
2024-07-11 13:03:53,905 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=77.8 pTM=0.396 ipTM=0.532 tol=2.44
2024-07-11 13:04:03,133 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=77.5 pTM=0.398 ipTM=0.534 tol=2.38
2024-07-11 13:04:12,367 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=78.2 pTM=0.401 ipTM=0.537 tol=1.11
2024-07-11 13:04:21,599 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=77.6 pTM=0.396 ipTM=0.529 tol=1.11
2024-07-11 13:04:30,831 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=78 pTM=0.403 ipTM=0.547 tol=1.66
2024-07-11 13:04:40,058 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=77.6 pTM=0.404 ipTM=0.544 tol=1.39
2024-07-11 13:04:49,287 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=77.6 pTM=0.405 ipTM=0.55 tol=1.37
2024-07-11 13:04:58,516 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=77.7 pTM=0.403 ipTM=0.543 tol=0.781
2024-07-11 13:05:07,745 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=77.9 pTM=0.403 ipTM=0.536 tol=0.822
2024-07-11 13:05:16,977 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=78.4 pTM=0.408 ipTM=0.55 tol=0.614
2024-07-11 13:05:26,190 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=77.6 pTM=0.405 ipTM=0.549 tol=1.01
2024-07-11 13:05:35,411 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=77.3 pTM=0.4 ipTM=0.538 tol=0.734
2024-07-11 13:05:44,639 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=78 pTM=0.409 ipTM=0.562 tol=0.828
2024-07-11 13:05:53,861 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=77.6 pTM=0.408 ipTM=0.557 tol=1.06
2024-07-11 13:06:03,086 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=77.8 pTM=0.408 ipTM=0.561 tol=1.26
2024-07-11 13:06:12,318 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=78.2 pTM=0.41 ipTM=0.559 tol=1.59
2024-07-11 13:06:21,542 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=77.8 pTM=0.404 ipTM=0.544 tol=1.05
2024-07-11 13:06:30,770 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=78.2 pTM=0.407 ipTM=0.554 tol=0.712
2024-07-11 13:06:39,998 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=77.6 pTM=0.4 ipTM=0.533 tol=0.768
2024-07-11 13:06:49,228 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=77.6 pTM=0.398 ipTM=0.531 tol=0.865
2024-07-11 13:06:58,450 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=77.6 pTM=0.397 ipTM=0.524 tol=0.965
2024-07-11 13:07:07,683 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=77.6 pTM=0.401 ipTM=0.538 tol=1.42
2024-07-11 13:07:16,911 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=77.6 pTM=0.401 ipTM=0.541 tol=1.38
2024-07-11 13:07:16,912 alphafold2_multimer_v3_model_2_seed_000 took 286.1s (30 recycles)
2024-07-11 13:07:26,463 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=73 pTM=0.376 ipTM=0.123
2024-07-11 13:07:35,717 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=74.2 pTM=0.386 ipTM=0.13 tol=10.6
2024-07-11 13:07:44,978 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=73.4 pTM=0.377 ipTM=0.125 tol=5.25
2024-07-11 13:07:54,246 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=74.2 pTM=0.384 ipTM=0.132 tol=3.77
2024-07-11 13:08:03,503 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=74.1 pTM=0.383 ipTM=0.138 tol=3.38
2024-07-11 13:08:12,766 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=74.1 pTM=0.385 ipTM=0.142 tol=2.58
2024-07-11 13:08:22,022 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=74.1 pTM=0.386 ipTM=0.142 tol=2.41
2024-07-11 13:08:31,278 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=74.1 pTM=0.385 ipTM=0.143 tol=2.78
2024-07-11 13:08:40,525 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=74.4 pTM=0.39 ipTM=0.147 tol=3.04
2024-07-11 13:08:49,775 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=74.6 pTM=0.387 ipTM=0.142 tol=2.03
2024-07-11 13:08:59,035 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=74.6 pTM=0.39 ipTM=0.144 tol=1.77
2024-07-11 13:09:08,297 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=75 pTM=0.386 ipTM=0.144 tol=1.59
2024-07-11 13:09:17,553 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=74.6 pTM=0.385 ipTM=0.134 tol=2.11
2024-07-11 13:09:26,817 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=74.8 pTM=0.382 ipTM=0.133 tol=3.78
2024-07-11 13:09:36,074 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=74.8 pTM=0.385 ipTM=0.138 tol=4.04
2024-07-11 13:09:45,327 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=74.8 pTM=0.388 ipTM=0.14 tol=4.04
2024-07-11 13:09:54,593 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=74.7 pTM=0.382 ipTM=0.13 tol=4.04
2024-07-11 13:10:03,849 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=74.9 pTM=0.387 ipTM=0.138 tol=3.91
2024-07-11 13:10:13,105 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=74.8 pTM=0.39 ipTM=0.146 tol=1.3
2024-07-11 13:10:22,362 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=74.8 pTM=0.387 ipTM=0.149 tol=1.65
2024-07-11 13:10:31,623 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=74.9 pTM=0.388 ipTM=0.149 tol=1.73
2024-07-11 13:10:40,886 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=74.8 pTM=0.386 ipTM=0.138 tol=2.04
2024-07-11 13:10:50,160 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=74.2 pTM=0.384 ipTM=0.128 tol=4.16
2024-07-11 13:10:59,423 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=74 pTM=0.384 ipTM=0.133 tol=3.44
2024-07-11 13:11:08,693 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=74.6 pTM=0.388 ipTM=0.139 tol=6.21
2024-07-11 13:11:17,944 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=74.3 pTM=0.384 ipTM=0.145 tol=5.07
2024-07-11 13:11:27,194 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=74.2 pTM=0.385 ipTM=0.15 tol=1.61
2024-07-11 13:11:36,447 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=74.4 pTM=0.389 ipTM=0.148 tol=2.59
2024-07-11 13:11:45,697 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=74.4 pTM=0.388 ipTM=0.152 tol=2.71
2024-07-11 13:11:54,942 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=73.4 pTM=0.391 ipTM=0.165 tol=4.84
2024-07-11 13:12:04,194 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=74.9 pTM=0.387 ipTM=0.155 tol=5.41
2024-07-11 13:12:04,194 alphafold2_multimer_v3_model_3_seed_000 took 287.0s (30 recycles)
2024-07-11 13:12:13,728 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=72.7 pTM=0.362 ipTM=0.146
2024-07-11 13:12:22,958 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=72.9 pTM=0.376 ipTM=0.211 tol=20.1
2024-07-11 13:12:32,192 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=73.3 pTM=0.383 ipTM=0.179 tol=3.65
2024-07-11 13:12:41,432 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=73.6 pTM=0.381 ipTM=0.166 tol=3.16
2024-07-11 13:12:50,676 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=73.6 pTM=0.38 ipTM=0.186 tol=3.45
2024-07-11 13:12:59,920 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=73.6 pTM=0.379 ipTM=0.172 tol=2.7
2024-07-11 13:13:09,160 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=74.4 pTM=0.381 ipTM=0.17 tol=5.57
2024-07-11 13:13:18,403 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=73.4 pTM=0.374 ipTM=0.159 tol=3.07
2024-07-11 13:13:27,647 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=74.4 pTM=0.382 ipTM=0.17 tol=2.33
2024-07-11 13:13:36,887 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=74.2 pTM=0.375 ipTM=0.159 tol=3.88
2024-07-11 13:13:46,136 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=73 pTM=0.383 ipTM=0.16 tol=12.2
2024-07-11 13:13:55,375 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=73.8 pTM=0.378 ipTM=0.161 tol=9.51
2024-07-11 13:14:04,622 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=75 pTM=0.39 ipTM=0.177 tol=2.95
2024-07-11 13:14:13,874 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=74.6 pTM=0.385 ipTM=0.162 tol=7.71
2024-07-11 13:14:23,113 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=74.2 pTM=0.385 ipTM=0.171 tol=8.01
2024-07-11 13:14:32,361 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=75.1 pTM=0.395 ipTM=0.184 tol=6.94
2024-07-11 13:14:41,602 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=74.1 pTM=0.382 ipTM=0.172 tol=4.42
2024-07-11 13:14:50,849 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=74.8 pTM=0.383 ipTM=0.16 tol=3.33
2024-07-11 13:15:00,097 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=74.5 pTM=0.388 ipTM=0.174 tol=4.19
2024-07-11 13:15:09,345 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=74.3 pTM=0.385 ipTM=0.169 tol=4.02
2024-07-11 13:15:18,591 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=74.4 pTM=0.385 ipTM=0.173 tol=6.67
2024-07-11 13:15:27,833 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=73.8 pTM=0.38 ipTM=0.165 tol=4.13
2024-07-11 13:15:37,084 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=74.2 pTM=0.383 ipTM=0.167 tol=3.62
2024-07-11 13:15:46,330 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=74.2 pTM=0.383 ipTM=0.166 tol=3.27
2024-07-11 13:15:55,576 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=74.4 pTM=0.385 ipTM=0.169 tol=3.1
2024-07-11 13:16:04,821 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=74.4 pTM=0.382 ipTM=0.161 tol=2.31
2024-07-11 13:16:14,065 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=74.1 pTM=0.385 ipTM=0.168 tol=3.17
2024-07-11 13:16:23,327 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=74.2 pTM=0.384 ipTM=0.154 tol=2.04
2024-07-11 13:16:32,573 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=74.2 pTM=0.384 ipTM=0.165 tol=1.62
2024-07-11 13:16:41,825 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=74.1 pTM=0.381 ipTM=0.158 tol=3.83
2024-07-11 13:16:51,068 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=74.2 pTM=0.384 ipTM=0.167 tol=4.78
2024-07-11 13:16:51,069 alphafold2_multimer_v3_model_4_seed_000 took 286.6s (30 recycles)
2024-07-11 13:17:00,618 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=72.8 pTM=0.384 ipTM=0.147
2024-07-11 13:17:09,864 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=72.6 pTM=0.387 ipTM=0.162 tol=12.9
2024-07-11 13:17:19,109 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=72.5 pTM=0.389 ipTM=0.172 tol=8.22
2024-07-11 13:17:28,372 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=74.2 pTM=0.394 ipTM=0.177 tol=4.08
2024-07-11 13:17:37,641 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=74.3 pTM=0.392 ipTM=0.186 tol=1.81
2024-07-11 13:17:46,907 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=74.3 pTM=0.394 ipTM=0.182 tol=4.41
2024-07-11 13:17:56,158 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=74.6 pTM=0.395 ipTM=0.186 tol=2.1
2024-07-11 13:18:05,400 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=72.8 pTM=0.393 ipTM=0.186 tol=8.91
2024-07-11 13:18:14,658 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=74.8 pTM=0.399 ipTM=0.189 tol=6.88
2024-07-11 13:18:23,910 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=74.1 pTM=0.389 ipTM=0.176 tol=5.25
2024-07-11 13:18:33,168 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=74.8 pTM=0.397 ipTM=0.182 tol=3.34
2024-07-11 13:18:42,417 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=74.5 pTM=0.396 ipTM=0.185 tol=2.78
2024-07-11 13:18:51,682 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=74.7 pTM=0.397 ipTM=0.183 tol=3.79
2024-07-11 13:19:00,938 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=74.4 pTM=0.392 ipTM=0.173 tol=4.31
2024-07-11 13:19:10,199 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=74.3 pTM=0.391 ipTM=0.169 tol=4.25
2024-07-11 13:19:19,454 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=74.4 pTM=0.395 ipTM=0.177 tol=3.86
2024-07-11 13:19:28,701 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=74 pTM=0.392 ipTM=0.169 tol=4.04
2024-07-11 13:19:37,962 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=74.6 pTM=0.396 ipTM=0.175 tol=3.87
2024-07-11 13:19:47,217 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=74.2 pTM=0.394 ipTM=0.171 tol=4.1
2024-07-11 13:19:56,476 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=74.4 pTM=0.392 ipTM=0.173 tol=4.2
2024-07-11 13:20:05,733 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=74.3 pTM=0.396 ipTM=0.172 tol=2.48
2024-07-11 13:20:14,987 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=74.4 pTM=0.395 ipTM=0.172 tol=3.47
2024-07-11 13:20:24,243 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=73.8 pTM=0.394 ipTM=0.173 tol=1.44
2024-07-11 13:20:33,498 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=74.1 pTM=0.393 ipTM=0.171 tol=3.94
2024-07-11 13:20:42,751 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=74.1 pTM=0.398 ipTM=0.169 tol=3.93
2024-07-11 13:20:52,005 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=74.2 pTM=0.391 ipTM=0.179 tol=5.55
2024-07-11 13:21:01,257 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=73.7 pTM=0.392 ipTM=0.176 tol=2.07
2024-07-11 13:21:10,501 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=74 pTM=0.393 ipTM=0.187 tol=0.965
2024-07-11 13:21:19,756 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=74.1 pTM=0.393 ipTM=0.184 tol=5.45
2024-07-11 13:21:28,998 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=74.1 pTM=0.393 ipTM=0.181 tol=3.24
2024-07-11 13:21:38,258 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=73.9 pTM=0.39 ipTM=0.171 tol=4.18
2024-07-11 13:21:38,258 alphafold2_multimer_v3_model_5_seed_000 took 286.9s (30 recycles)
2024-07-11 13:21:38,553 reranking models by 'multimer' metric
2024-07-11 13:21:53,320 Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
2024-07-11 13:22:53,945 Relaxation took 75.4s
2024-07-11 13:22:53,946 rank_001_alphafold2_multimer_v3_model_2_seed_000 pLDDT=77.6 pTM=0.401 ipTM=0.541
2024-07-11 13:23:46,367 Relaxation took 52.4s
2024-07-11 13:23:46,367 rank_002_alphafold2_multimer_v3_model_5_seed_000 pLDDT=73.9 pTM=0.39 ipTM=0.171
2024-07-11 13:24:28,226 Relaxation took 41.9s
2024-07-11 13:24:28,226 rank_003_alphafold2_multimer_v3_model_4_seed_000 pLDDT=74.2 pTM=0.384 ipTM=0.167
2024-07-11 13:25:04,854 Relaxation took 36.6s
2024-07-11 13:25:04,854 rank_004_alphafold2_multimer_v3_model_1_seed_000 pLDDT=71 pTM=0.365 ipTM=0.167
2024-07-11 13:25:46,126 Relaxation took 41.3s
2024-07-11 13:25:46,126 rank_005_alphafold2_multimer_v3_model_3_seed_000 pLDDT=74.9 pTM=0.387 ipTM=0.155
2024-07-11 13:25:47,377 Done