2024-07-11 13:27:22,365 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3)
2024-07-11 13:27:22,690 Running on GPU
2024-07-11 13:27:36,313 Found 6 citations for tools or databases
2024-07-11 13:27:36,313 Query 1/1: MYLK4_NEK11 (length 1033)
2024-07-11 13:27:36,757 Sleeping for 5s. Reason: PENDING
2024-07-11 13:27:42,160 Sleeping for 10s. Reason: RUNNING
2024-07-11 13:27:52,564 Sleeping for 7s. Reason: RUNNING
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2024-07-11 13:28:37,619 Sleeping for 6s. Reason: RUNNING
2024-07-11 13:28:44,021 Sleeping for 5s. Reason: RUNNING
2024-07-11 13:28:49,419 Sleeping for 8s. Reason: RUNNING
2024-07-11 13:28:57,832 Sleeping for 10s. Reason: RUNNING
2024-07-11 13:29:08,234 Sleeping for 10s. Reason: RUNNING
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2024-07-11 13:30:33,374 Sleeping for 9s. Reason: RUNNING
2024-07-11 13:30:42,794 Sleeping for 10s. Reason: RUNNING
2024-07-11 13:30:53,204 Sleeping for 7s. Reason: RUNNING
2024-07-11 13:31:00,607 Sleeping for 9s. Reason: RUNNING
2024-07-11 13:31:10,026 Sleeping for 8s. Reason: RUNNING
2024-07-11 13:31:18,442 Sleeping for 7s. Reason: RUNNING
2024-07-11 13:31:25,843 Sleeping for 5s. Reason: RUNNING
2024-07-11 13:31:31,260 Sleeping for 10s. Reason: RUNNING
2024-07-11 13:31:41,674 Sleeping for 5s. Reason: RUNNING
2024-07-11 13:31:47,066 Sleeping for 5s. Reason: RUNNING
2024-07-11 13:31:52,474 Sleeping for 8s. Reason: RUNNING
2024-07-11 13:32:09,671 Sleeping for 10s. Reason: PENDING
2024-07-11 13:32:20,077 Sleeping for 9s. Reason: RUNNING
2024-07-11 13:32:29,479 Sleeping for 10s. Reason: RUNNING
2024-07-11 13:32:39,900 Sleeping for 7s. Reason: RUNNING
2024-07-11 13:32:47,303 Sleeping for 9s. Reason: RUNNING
2024-07-11 13:32:56,714 Sleeping for 7s. Reason: RUNNING
2024-07-11 13:33:04,128 Sleeping for 10s. Reason: RUNNING
2024-07-11 13:33:14,565 Sleeping for 6s. Reason: RUNNING
2024-07-11 13:33:20,971 Sleeping for 8s. Reason: RUNNING
2024-07-11 13:33:29,380 Sleeping for 8s. Reason: RUNNING
2024-07-11 13:33:37,781 Sleeping for 7s. Reason: RUNNING
2024-07-11 13:33:45,221 Sleeping for 7s. Reason: RUNNING
2024-07-11 13:33:52,618 Sleeping for 8s. Reason: RUNNING
2024-07-11 13:34:01,034 Sleeping for 8s. Reason: RUNNING
2024-07-11 13:34:09,457 Sleeping for 7s. Reason: RUNNING
2024-07-11 13:34:16,869 Sleeping for 10s. Reason: RUNNING
2024-07-11 13:34:27,280 Sleeping for 6s. Reason: RUNNING
2024-07-11 13:34:33,688 Sleeping for 10s. Reason: RUNNING
2024-07-11 13:34:44,100 Sleeping for 7s. Reason: RUNNING
2024-07-11 13:34:51,494 Sleeping for 10s. Reason: RUNNING
2024-07-11 13:35:01,896 Sleeping for 9s. Reason: RUNNING
2024-07-11 13:35:17,090 Setting max_seq=508, max_extra_seq=2048
2024-07-11 13:39:09,910 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=58.6 pTM=0.404 ipTM=0.461
2024-07-11 13:39:33,932 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=59.6 pTM=0.407 ipTM=0.366 tol=7.34
2024-07-11 13:39:58,016 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=58.8 pTM=0.411 ipTM=0.394 tol=3.35
2024-07-11 13:40:22,173 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=59.2 pTM=0.405 ipTM=0.383 tol=2.24
2024-07-11 13:40:46,354 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=59.2 pTM=0.41 ipTM=0.401 tol=1.19
2024-07-11 13:41:10,570 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=59.4 pTM=0.406 ipTM=0.396 tol=1.93
2024-07-11 13:41:34,786 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=59.3 pTM=0.407 ipTM=0.391 tol=1.77
2024-07-11 13:41:59,013 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=59.4 pTM=0.409 ipTM=0.442 tol=2.27
2024-07-11 13:42:23,258 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=59.3 pTM=0.409 ipTM=0.42 tol=2.57
2024-07-11 13:42:47,499 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=59.3 pTM=0.407 ipTM=0.431 tol=2.86
2024-07-11 13:43:11,751 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=59.2 pTM=0.409 ipTM=0.419 tol=2.67
2024-07-11 13:43:36,026 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=59.5 pTM=0.406 ipTM=0.399 tol=1.76
2024-07-11 13:44:00,274 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=59.1 pTM=0.409 ipTM=0.409 tol=2.35
2024-07-11 13:44:24,535 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=59 pTM=0.405 ipTM=0.392 tol=1.32
2024-07-11 13:44:48,795 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=59.2 pTM=0.411 ipTM=0.413 tol=1.63
2024-07-11 13:45:13,044 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=59.6 pTM=0.405 ipTM=0.392 tol=2.71
2024-07-11 13:45:37,304 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=59.5 pTM=0.41 ipTM=0.403 tol=2.15
2024-07-11 13:46:01,562 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=59.2 pTM=0.405 ipTM=0.413 tol=2.47
2024-07-11 13:46:25,822 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=59.2 pTM=0.409 ipTM=0.407 tol=1.15
2024-07-11 13:46:50,089 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=59.6 pTM=0.409 ipTM=0.409 tol=2.38
2024-07-11 13:47:14,349 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=59.3 pTM=0.409 ipTM=0.392 tol=1.79
2024-07-11 13:47:38,623 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=59.4 pTM=0.406 ipTM=0.402 tol=1.45
2024-07-11 13:48:02,885 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=59.1 pTM=0.408 ipTM=0.391 tol=1.82
2024-07-11 13:48:27,146 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=59.3 pTM=0.405 ipTM=0.373 tol=1.56
2024-07-11 13:48:51,418 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=59.1 pTM=0.407 ipTM=0.372 tol=0.944
2024-07-11 13:49:15,696 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=59.1 pTM=0.405 ipTM=0.391 tol=3.55
2024-07-11 13:49:39,974 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=59.2 pTM=0.409 ipTM=0.394 tol=3.15
2024-07-11 13:50:04,260 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=59.5 pTM=0.405 ipTM=0.393 tol=2.79
2024-07-11 13:50:28,532 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=59.2 pTM=0.41 ipTM=0.404 tol=2.34
2024-07-11 13:50:52,819 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=59.5 pTM=0.405 ipTM=0.379 tol=3.37
2024-07-11 13:51:17,103 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=59 pTM=0.407 ipTM=0.341 tol=2.72
2024-07-11 13:51:17,104 alphafold2_multimer_v3_model_1_seed_000 took 912.6s (30 recycles)
2024-07-11 13:51:42,020 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=59.9 pTM=0.407 ipTM=0.252
2024-07-11 13:52:06,307 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=60.8 pTM=0.409 ipTM=0.333 tol=7.91
2024-07-11 13:52:30,607 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=60.8 pTM=0.415 ipTM=0.415 tol=2.67
2024-07-11 13:52:54,915 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=61.2 pTM=0.402 ipTM=0.349 tol=2.4
2024-07-11 13:53:19,215 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=60.8 pTM=0.406 ipTM=0.341 tol=2.21
2024-07-11 13:53:43,531 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=61.9 pTM=0.406 ipTM=0.333 tol=2.24
2024-07-11 13:54:07,832 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=61 pTM=0.404 ipTM=0.317 tol=1.45
2024-07-11 13:54:32,152 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=61.1 pTM=0.406 ipTM=0.379 tol=1.79
2024-07-11 13:54:56,459 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=61.6 pTM=0.4 ipTM=0.314 tol=2.64
2024-07-11 13:55:20,731 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=60.8 pTM=0.399 ipTM=0.289 tol=1.19
2024-07-11 13:55:45,047 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=62.2 pTM=0.405 ipTM=0.36 tol=2.33
2024-07-11 13:56:09,339 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=61 pTM=0.403 ipTM=0.326 tol=1.86
2024-07-11 13:56:33,643 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=60.9 pTM=0.399 ipTM=0.311 tol=1.8
2024-07-11 13:56:57,936 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=61.3 pTM=0.4 ipTM=0.326 tol=1.86
2024-07-11 13:57:22,224 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=60.7 pTM=0.402 ipTM=0.305 tol=1.06
2024-07-11 13:57:46,516 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=61.8 pTM=0.401 ipTM=0.323 tol=2.54
2024-07-11 13:58:10,800 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=61.2 pTM=0.404 ipTM=0.338 tol=1.73
2024-07-11 13:58:35,089 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=60.8 pTM=0.4 ipTM=0.305 tol=1.76
2024-07-11 13:58:59,402 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=61.4 pTM=0.397 ipTM=0.299 tol=1.76
2024-07-11 13:59:23,679 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=60.7 pTM=0.402 ipTM=0.323 tol=1.88
2024-07-11 13:59:47,986 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=62 pTM=0.402 ipTM=0.355 tol=2.56
2024-07-11 14:00:12,267 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=60.8 pTM=0.404 ipTM=0.333 tol=1.96
2024-07-11 14:00:36,565 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=60.8 pTM=0.401 ipTM=0.331 tol=1.63
2024-07-11 14:01:00,861 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=61.1 pTM=0.398 ipTM=0.305 tol=1.76
2024-07-11 14:01:25,151 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=60.5 pTM=0.399 ipTM=0.302 tol=1.28
2024-07-11 14:01:49,453 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=61.4 pTM=0.402 ipTM=0.334 tol=1.95
2024-07-11 14:02:13,748 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=61.1 pTM=0.404 ipTM=0.309 tol=1.43
2024-07-11 14:02:38,038 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=60.8 pTM=0.4 ipTM=0.316 tol=1.93
2024-07-11 14:03:02,338 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=61.3 pTM=0.402 ipTM=0.367 tol=3.06
2024-07-11 14:03:26,622 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=60.6 pTM=0.401 ipTM=0.324 tol=1.67
2024-07-11 14:03:50,935 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=61.7 pTM=0.402 ipTM=0.331 tol=2.35
2024-07-11 14:03:50,935 alphafold2_multimer_v3_model_2_seed_000 took 753.2s (30 recycles)
2024-07-11 14:04:15,900 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=58.3 pTM=0.394 ipTM=0.262
2024-07-11 14:04:40,232 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=60.5 pTM=0.406 ipTM=0.506 tol=9.56
2024-07-11 14:05:04,568 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=59.4 pTM=0.399 ipTM=0.33 tol=5.48
2024-07-11 14:05:28,923 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=59 pTM=0.404 ipTM=0.5 tol=3.85
2024-07-11 14:05:53,279 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=59.6 pTM=0.401 ipTM=0.34 tol=3.26
2024-07-11 14:06:17,633 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=60.7 pTM=0.409 ipTM=0.416 tol=4.2
2024-07-11 14:06:41,982 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=59.8 pTM=0.402 ipTM=0.325 tol=1.83
2024-07-11 14:07:06,347 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=60.4 pTM=0.401 ipTM=0.363 tol=3.05
2024-07-11 14:07:30,689 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=59.8 pTM=0.401 ipTM=0.339 tol=2.94
2024-07-11 14:07:55,040 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=60.3 pTM=0.403 ipTM=0.337 tol=2.88
2024-07-11 14:08:19,373 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=59.7 pTM=0.399 ipTM=0.314 tol=3.08
2024-07-11 14:08:43,733 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=59.7 pTM=0.4 ipTM=0.351 tol=4.29
2024-07-11 14:09:08,089 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=59.6 pTM=0.4 ipTM=0.328 tol=4.08
2024-07-11 14:09:32,423 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=60.5 pTM=0.424 ipTM=0.336 tol=5.54
2024-07-11 14:09:56,778 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=59.6 pTM=0.397 ipTM=0.321 tol=3.91
2024-07-11 14:10:21,143 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=60.3 pTM=0.4 ipTM=0.387 tol=2.76
2024-07-11 14:10:45,500 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=59.5 pTM=0.4 ipTM=0.312 tol=2.63
2024-07-11 14:11:09,862 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=60.5 pTM=0.412 ipTM=0.371 tol=4.36
2024-07-11 14:11:34,229 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=59.7 pTM=0.397 ipTM=0.315 tol=2.53
2024-07-11 14:11:58,600 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=60.1 pTM=0.399 ipTM=0.352 tol=2.92
2024-07-11 14:12:22,941 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=59.6 pTM=0.403 ipTM=0.305 tol=2.1
2024-07-11 14:12:47,270 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=60.5 pTM=0.408 ipTM=0.376 tol=4.45
2024-07-11 14:13:11,612 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=59.8 pTM=0.401 ipTM=0.308 tol=2.39
2024-07-11 14:13:35,955 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=60.5 pTM=0.405 ipTM=0.411 tol=2.38
2024-07-11 14:14:00,297 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=59.6 pTM=0.404 ipTM=0.303 tol=2.78
2024-07-11 14:14:24,648 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=60.3 pTM=0.406 ipTM=0.399 tol=2.92
2024-07-11 14:14:48,994 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=58.6 pTM=0.404 ipTM=0.311 tol=12.8
2024-07-11 14:15:13,356 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=60.2 pTM=0.4 ipTM=0.325 tol=8.62
2024-07-11 14:15:37,710 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=59.5 pTM=0.399 ipTM=0.297 tol=6.93
2024-07-11 14:16:02,059 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=59.4 pTM=0.406 ipTM=0.371 tol=11.5
2024-07-11 14:16:26,443 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=59.5 pTM=0.399 ipTM=0.282 tol=7.98
2024-07-11 14:16:26,444 alphafold2_multimer_v3_model_3_seed_000 took 754.8s (30 recycles)
2024-07-11 14:16:51,411 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=56.5 pTM=0.4 ipTM=0.245
2024-07-11 14:17:15,778 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=58.3 pTM=0.408 ipTM=0.244 tol=10.6
2024-07-11 14:17:40,161 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=58.1 pTM=0.397 ipTM=0.243 tol=12.2
2024-07-11 14:18:04,575 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=58.8 pTM=0.39 ipTM=0.187 tol=6.19
2024-07-11 14:18:28,973 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=58.2 pTM=0.396 ipTM=0.205 tol=7.26
2024-07-11 14:18:53,366 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=58.7 pTM=0.399 ipTM=0.239 tol=8.04
2024-07-11 14:19:17,771 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=58.5 pTM=0.394 ipTM=0.22 tol=4.87
2024-07-11 14:19:42,173 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=59.4 pTM=0.401 ipTM=0.24 tol=5.75
2024-07-11 14:20:06,568 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=58.5 pTM=0.402 ipTM=0.304 tol=3.93
2024-07-11 14:20:30,959 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=58.6 pTM=0.4 ipTM=0.245 tol=5.73
2024-07-11 14:20:55,350 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=57.9 pTM=0.4 ipTM=0.223 tol=4.12
2024-07-11 14:21:19,727 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=58.9 pTM=0.398 ipTM=0.262 tol=3.07
2024-07-11 14:21:44,082 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=57.7 pTM=0.403 ipTM=0.236 tol=3.32
2024-07-11 14:22:08,498 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=58 pTM=0.395 ipTM=0.227 tol=5.98
2024-07-11 14:22:32,880 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=58.6 pTM=0.408 ipTM=0.516 tol=10.9
2024-07-11 14:22:57,250 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=59.7 pTM=0.397 ipTM=0.323 tol=7.77
2024-07-11 14:23:21,593 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=58.4 pTM=0.401 ipTM=0.245 tol=3.92
2024-07-11 14:23:45,990 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=59.1 pTM=0.399 ipTM=0.282 tol=4.46
2024-07-11 14:24:10,356 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=58.6 pTM=0.397 ipTM=0.274 tol=4.07
2024-07-11 14:24:34,728 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=59.5 pTM=0.398 ipTM=0.309 tol=3.29
2024-07-11 14:24:59,082 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=58.3 pTM=0.402 ipTM=0.282 tol=4.6
2024-07-11 14:25:23,467 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=59.1 pTM=0.4 ipTM=0.233 tol=5.24
2024-07-11 14:25:47,849 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=58.8 pTM=0.399 ipTM=0.291 tol=5.69
2024-07-11 14:26:12,248 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=59.2 pTM=0.394 ipTM=0.274 tol=6.81
2024-07-11 14:26:36,636 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=58.1 pTM=0.401 ipTM=0.217 tol=6.73
2024-07-11 14:27:01,028 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=59.3 pTM=0.4 ipTM=0.312 tol=5.35
2024-07-11 14:27:25,407 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=59 pTM=0.404 ipTM=0.298 tol=6.25
2024-07-11 14:27:49,809 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=59 pTM=0.396 ipTM=0.26 tol=4.55
2024-07-11 14:28:14,187 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=58.4 pTM=0.399 ipTM=0.264 tol=3.6
2024-07-11 14:28:38,576 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=59.1 pTM=0.399 ipTM=0.27 tol=4.34
2024-07-11 14:29:02,950 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=58.6 pTM=0.4 ipTM=0.273 tol=2.86
2024-07-11 14:29:02,950 alphafold2_multimer_v3_model_4_seed_000 took 755.8s (30 recycles)
2024-07-11 14:29:27,917 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=59.1 pTM=0.398 ipTM=0.258
2024-07-11 14:29:52,279 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=59.7 pTM=0.395 ipTM=0.398 tol=10.1
2024-07-11 14:30:16,654 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=59.9 pTM=0.396 ipTM=0.429 tol=6.09
2024-07-11 14:30:41,052 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=59.6 pTM=0.393 ipTM=0.388 tol=4.37
2024-07-11 14:31:05,451 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=60.5 pTM=0.399 ipTM=0.438 tol=5.75
2024-07-11 14:31:29,823 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=59.6 pTM=0.398 ipTM=0.46 tol=3.77
2024-07-11 14:31:54,205 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=59.4 pTM=0.397 ipTM=0.434 tol=4.07
2024-07-11 14:32:18,581 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=59.8 pTM=0.405 ipTM=0.492 tol=4.73
2024-07-11 14:32:42,968 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=58.9 pTM=0.402 ipTM=0.458 tol=5.09
2024-07-11 14:33:07,401 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=60.2 pTM=0.395 ipTM=0.387 tol=5.18
2024-07-11 14:33:31,788 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=60.1 pTM=0.396 ipTM=0.418 tol=6.4
2024-07-11 14:33:56,200 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=59.4 pTM=0.397 ipTM=0.466 tol=10.5
2024-07-11 14:34:20,617 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=60.3 pTM=0.4 ipTM=0.457 tol=8.29
2024-07-11 14:34:45,026 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=60.1 pTM=0.399 ipTM=0.488 tol=7
2024-07-11 14:35:09,410 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=59.8 pTM=0.4 ipTM=0.452 tol=3.48
2024-07-11 14:35:33,795 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=59.9 pTM=0.404 ipTM=0.428 tol=4.57
2024-07-11 14:35:58,212 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=58.5 pTM=0.395 ipTM=0.393 tol=7.61
2024-07-11 14:36:22,649 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=58.9 pTM=0.392 ipTM=0.31 tol=5.62
2024-07-11 14:36:47,062 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=59.8 pTM=0.394 ipTM=0.39 tol=5.58
2024-07-11 14:37:11,457 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=59.5 pTM=0.398 ipTM=0.451 tol=2.91
2024-07-11 14:37:35,884 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=60.5 pTM=0.397 ipTM=0.437 tol=3.44
2024-07-11 14:38:00,285 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=59.3 pTM=0.398 ipTM=0.467 tol=2.75
2024-07-11 14:38:24,707 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=60.4 pTM=0.397 ipTM=0.455 tol=5.11
2024-07-11 14:38:49,108 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=59.7 pTM=0.398 ipTM=0.449 tol=4.79
2024-07-11 14:39:13,545 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=59.8 pTM=0.397 ipTM=0.416 tol=4.58
2024-07-11 14:39:37,968 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=59.2 pTM=0.392 ipTM=0.39 tol=4.33
2024-07-11 14:40:02,371 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=60.3 pTM=0.394 ipTM=0.363 tol=5.34
2024-07-11 14:40:26,753 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=60.2 pTM=0.399 ipTM=0.432 tol=4.93
2024-07-11 14:40:51,106 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=59.8 pTM=0.401 ipTM=0.469 tol=3.89
2024-07-11 14:41:15,507 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=59.9 pTM=0.4 ipTM=0.47 tol=4.32
2024-07-11 14:41:39,901 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=59.7 pTM=0.4 ipTM=0.47 tol=4.45
2024-07-11 14:41:39,902 alphafold2_multimer_v3_model_5_seed_000 took 756.3s (30 recycles)
2024-07-11 14:41:40,561 reranking models by 'multimer' metric
2024-07-11 14:42:03,263 Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
2024-07-11 14:43:22,069 Relaxation took 101.5s
2024-07-11 14:43:22,069 rank_001_alphafold2_multimer_v3_model_5_seed_000 pLDDT=59.7 pTM=0.4 ipTM=0.47
2024-07-11 14:44:25,272 Relaxation took 63.2s
2024-07-11 14:44:25,273 rank_002_alphafold2_multimer_v3_model_1_seed_000 pLDDT=59 pTM=0.407 ipTM=0.341
2024-07-11 14:46:05,318 Relaxation took 100.0s
2024-07-11 14:46:05,318 rank_003_alphafold2_multimer_v3_model_2_seed_000 pLDDT=61.7 pTM=0.402 ipTM=0.331
2024-07-11 14:48:00,537 Relaxation took 115.2s
2024-07-11 14:48:00,537 rank_004_alphafold2_multimer_v3_model_3_seed_000 pLDDT=59.5 pTM=0.399 ipTM=0.282
2024-07-11 14:49:20,525 Relaxation took 80.0s
2024-07-11 14:49:20,525 rank_005_alphafold2_multimer_v3_model_4_seed_000 pLDDT=58.6 pTM=0.4 ipTM=0.273
2024-07-11 14:49:25,557 Done