2024-07-11 14:51:22,727 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3)
2024-07-11 14:51:23,069 Running on GPU
2024-07-11 14:51:46,864 Found 6 citations for tools or databases
2024-07-11 14:51:46,864 Query 1/1: NAA80_BPIA1 (length 542)
2024-07-11 14:51:47,305 Sleeping for 10s. Reason: PENDING
2024-07-11 14:51:57,709 Sleeping for 7s. Reason: RUNNING
2024-07-11 14:52:05,124 Sleeping for 10s. Reason: RUNNING
2024-07-11 14:52:15,525 Sleeping for 7s. Reason: RUNNING
2024-07-11 14:52:22,920 Sleeping for 7s. Reason: RUNNING
2024-07-11 14:52:30,319 Sleeping for 6s. Reason: RUNNING
2024-07-11 14:52:36,706 Sleeping for 6s. Reason: RUNNING
2024-07-11 14:52:43,100 Sleeping for 10s. Reason: RUNNING
2024-07-11 14:52:53,496 Sleeping for 8s. Reason: RUNNING
2024-07-11 14:53:03,371 Sleeping for 6s. Reason: PENDING
2024-07-11 14:53:09,788 Sleeping for 7s. Reason: RUNNING
2024-07-11 14:53:17,191 Sleeping for 5s. Reason: RUNNING
2024-07-11 14:53:22,611 Sleeping for 9s. Reason: RUNNING
2024-07-11 14:53:32,018 Sleeping for 9s. Reason: RUNNING
2024-07-11 14:53:41,427 Sleeping for 6s. Reason: RUNNING
2024-07-11 14:53:49,334 Setting max_seq=508, max_extra_seq=1884
2024-07-11 14:57:27,367 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=57 pTM=0.435 ipTM=0.245
2024-07-11 14:57:33,663 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=59.4 pTM=0.431 ipTM=0.235 tol=9.66
2024-07-11 14:57:39,967 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=60 pTM=0.422 ipTM=0.201 tol=12.4
2024-07-11 14:57:46,265 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=59.2 pTM=0.402 ipTM=0.177 tol=9.12
2024-07-11 14:57:52,571 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=59.8 pTM=0.398 ipTM=0.166 tol=9.22
2024-07-11 14:57:58,868 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=59.3 pTM=0.404 ipTM=0.179 tol=2.91
2024-07-11 14:58:05,179 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=59.7 pTM=0.407 ipTM=0.187 tol=3.73
2024-07-11 14:58:11,490 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=59.4 pTM=0.403 ipTM=0.179 tol=2.06
2024-07-11 14:58:17,802 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=59.9 pTM=0.417 ipTM=0.2 tol=1.74
2024-07-11 14:58:24,114 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=60.3 pTM=0.403 ipTM=0.174 tol=1.44
2024-07-11 14:58:30,431 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=59.8 pTM=0.417 ipTM=0.21 tol=3.36
2024-07-11 14:58:36,753 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=60.5 pTM=0.405 ipTM=0.178 tol=2.16
2024-07-11 14:58:43,067 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=60.1 pTM=0.429 ipTM=0.235 tol=1.66
2024-07-11 14:58:49,390 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=59.9 pTM=0.409 ipTM=0.193 tol=1.89
2024-07-11 14:58:55,711 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=59.8 pTM=0.425 ipTM=0.229 tol=2.09
2024-07-11 14:59:02,052 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=60 pTM=0.4 ipTM=0.18 tol=2.1
2024-07-11 14:59:08,387 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=59.8 pTM=0.422 ipTM=0.222 tol=2.04
2024-07-11 14:59:14,731 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=60 pTM=0.401 ipTM=0.179 tol=2.04
2024-07-11 14:59:21,058 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=59.7 pTM=0.421 ipTM=0.221 tol=1.73
2024-07-11 14:59:27,393 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=59.8 pTM=0.401 ipTM=0.181 tol=1.68
2024-07-11 14:59:33,730 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=60.1 pTM=0.432 ipTM=0.245 tol=2.17
2024-07-11 14:59:40,064 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=59.8 pTM=0.412 ipTM=0.196 tol=2.8
2024-07-11 14:59:46,399 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=60 pTM=0.434 ipTM=0.247 tol=2.79
2024-07-11 14:59:52,744 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=60.3 pTM=0.402 ipTM=0.175 tol=1.77
2024-07-11 14:59:59,078 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=60.3 pTM=0.438 ipTM=0.255 tol=2.88
2024-07-11 15:00:05,422 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=60.2 pTM=0.401 ipTM=0.175 tol=2.38
2024-07-11 15:00:11,758 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=59.9 pTM=0.431 ipTM=0.241 tol=2.16
2024-07-11 15:00:18,096 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=59.8 pTM=0.416 ipTM=0.206 tol=2.37
2024-07-11 15:00:24,425 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=60.3 pTM=0.436 ipTM=0.248 tol=1.64
2024-07-11 15:00:30,766 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=60.4 pTM=0.401 ipTM=0.174 tol=2.15
2024-07-11 15:00:37,105 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=59.9 pTM=0.423 ipTM=0.223 tol=1.71
2024-07-11 15:00:37,106 alphafold2_multimer_v3_model_1_seed_000 took 342.7s (30 recycles)
2024-07-11 15:00:43,629 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=50.2 pTM=0.441 ipTM=0.267
2024-07-11 15:00:49,975 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=58.7 pTM=0.415 ipTM=0.198 tol=10.2
2024-07-11 15:00:56,328 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=60.7 pTM=0.415 ipTM=0.174 tol=8.03
2024-07-11 15:01:02,683 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=60.8 pTM=0.405 ipTM=0.173 tol=3.82
2024-07-11 15:01:09,046 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=61 pTM=0.405 ipTM=0.164 tol=2.61
2024-07-11 15:01:15,403 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=61.7 pTM=0.41 ipTM=0.226 tol=10.7
2024-07-11 15:01:21,759 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=62.7 pTM=0.43 ipTM=0.291 tol=2.84
2024-07-11 15:01:28,107 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=63.3 pTM=0.456 ipTM=0.331 tol=2.42
2024-07-11 15:01:34,459 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=62.3 pTM=0.419 ipTM=0.247 tol=1.34
2024-07-11 15:01:40,829 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=61.4 pTM=0.407 ipTM=0.182 tol=3.48
2024-07-11 15:01:47,202 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=61.4 pTM=0.411 ipTM=0.189 tol=3.95
2024-07-11 15:01:53,561 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=65.2 pTM=0.52 ipTM=0.457 tol=5.32
2024-07-11 15:01:59,916 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=63.7 pTM=0.443 ipTM=0.319 tol=3.28
2024-07-11 15:02:06,272 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=64.8 pTM=0.496 ipTM=0.416 tol=2.64
2024-07-11 15:02:12,631 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=63 pTM=0.427 ipTM=0.267 tol=2.7
2024-07-11 15:02:18,999 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=62.1 pTM=0.416 ipTM=0.208 tol=3.25
2024-07-11 15:02:25,354 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=66 pTM=0.551 ipTM=0.513 tol=4
2024-07-11 15:02:31,712 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=65.1 pTM=0.494 ipTM=0.433 tol=2.26
2024-07-11 15:02:38,063 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=64.9 pTM=0.499 ipTM=0.431 tol=0.816
2024-07-11 15:02:44,419 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=64.2 pTM=0.471 ipTM=0.388 tol=1.78
2024-07-11 15:02:50,756 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=64.4 pTM=0.483 ipTM=0.408 tol=1.02
2024-07-11 15:02:57,119 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=63.3 pTM=0.44 ipTM=0.309 tol=0.988
2024-07-11 15:03:03,472 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=64.7 pTM=0.507 ipTM=0.438 tol=1.45
2024-07-11 15:03:09,834 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=63.5 pTM=0.444 ipTM=0.321 tol=1.74
2024-07-11 15:03:16,185 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=64.8 pTM=0.503 ipTM=0.424 tol=1.96
2024-07-11 15:03:22,541 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=63.2 pTM=0.437 ipTM=0.287 tol=1.49
2024-07-11 15:03:28,899 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=64.1 pTM=0.481 ipTM=0.375 tol=1.33
2024-07-11 15:03:35,252 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=63.2 pTM=0.432 ipTM=0.277 tol=2.14
2024-07-11 15:03:41,605 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=64.1 pTM=0.473 ipTM=0.361 tol=2.27
2024-07-11 15:03:47,971 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=62.9 pTM=0.427 ipTM=0.26 tol=1.97
2024-07-11 15:03:54,336 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=62.3 pTM=0.426 ipTM=0.232 tol=2.46
2024-07-11 15:03:54,336 alphafold2_multimer_v3_model_2_seed_000 took 197.0s (30 recycles)
2024-07-11 15:04:00,878 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=60.1 pTM=0.535 ipTM=0.429
2024-07-11 15:04:07,232 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=61 pTM=0.463 ipTM=0.24 tol=5.43
2024-07-11 15:04:13,583 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=60.7 pTM=0.454 ipTM=0.252 tol=3.71
2024-07-11 15:04:19,943 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=61.3 pTM=0.427 ipTM=0.165 tol=2.87
2024-07-11 15:04:26,289 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=60.7 pTM=0.467 ipTM=0.274 tol=3.57
2024-07-11 15:04:32,654 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=61.2 pTM=0.427 ipTM=0.156 tol=2.31
2024-07-11 15:04:39,010 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=61 pTM=0.478 ipTM=0.293 tol=2.35
2024-07-11 15:04:45,361 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=61.3 pTM=0.43 ipTM=0.164 tol=1.57
2024-07-11 15:04:51,712 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=61 pTM=0.479 ipTM=0.296 tol=1.81
2024-07-11 15:04:58,073 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=61.2 pTM=0.429 ipTM=0.169 tol=2.04
2024-07-11 15:05:04,425 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=60.9 pTM=0.469 ipTM=0.267 tol=1.92
2024-07-11 15:05:10,779 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=60.9 pTM=0.43 ipTM=0.17 tol=2.95
2024-07-11 15:05:17,130 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=60.9 pTM=0.473 ipTM=0.279 tol=2.73
2024-07-11 15:05:23,492 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=61 pTM=0.427 ipTM=0.162 tol=2.53
2024-07-11 15:05:29,856 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=60 pTM=0.44 ipTM=0.199 tol=2.91
2024-07-11 15:05:36,213 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=60.6 pTM=0.421 ipTM=0.148 tol=2.68
2024-07-11 15:05:42,571 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=60.6 pTM=0.458 ipTM=0.244 tol=3.34
2024-07-11 15:05:48,924 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=60.4 pTM=0.42 ipTM=0.153 tol=3.2
2024-07-11 15:05:55,286 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=60.8 pTM=0.469 ipTM=0.269 tol=3.06
2024-07-11 15:06:01,659 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=60.7 pTM=0.422 ipTM=0.159 tol=3.29
2024-07-11 15:06:08,005 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=60.7 pTM=0.475 ipTM=0.286 tol=2.73
2024-07-11 15:06:14,367 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=60.1 pTM=0.42 ipTM=0.161 tol=2.72
2024-07-11 15:06:20,715 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=61 pTM=0.49 ipTM=0.315 tol=3.35
2024-07-11 15:06:27,068 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=60.2 pTM=0.43 ipTM=0.182 tol=2.68
2024-07-11 15:06:33,430 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=61.5 pTM=0.514 ipTM=0.371 tol=3.05
2024-07-11 15:06:39,791 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=60.5 pTM=0.434 ipTM=0.192 tol=3.38
2024-07-11 15:06:46,147 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=61.5 pTM=0.507 ipTM=0.353 tol=3.18
2024-07-11 15:06:52,498 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=60.3 pTM=0.432 ipTM=0.196 tol=2.7
2024-07-11 15:06:58,851 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=61.2 pTM=0.501 ipTM=0.342 tol=2.34
2024-07-11 15:07:05,206 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=60.4 pTM=0.432 ipTM=0.192 tol=2.69
2024-07-11 15:07:11,569 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=61 pTM=0.492 ipTM=0.324 tol=2.77
2024-07-11 15:07:11,569 alphafold2_multimer_v3_model_3_seed_000 took 197.0s (30 recycles)
2024-07-11 15:07:18,108 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=59.6 pTM=0.51 ipTM=0.393
2024-07-11 15:07:24,466 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=64.2 pTM=0.584 ipTM=0.539 tol=14.2
2024-07-11 15:07:30,826 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=63.4 pTM=0.524 ipTM=0.402 tol=5.57
2024-07-11 15:07:37,203 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=66.7 pTM=0.605 ipTM=0.583 tol=5.62
2024-07-11 15:07:43,572 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=64.3 pTM=0.522 ipTM=0.383 tol=3.96
2024-07-11 15:07:49,931 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=62.9 pTM=0.496 ipTM=0.343 tol=3.15
2024-07-11 15:07:56,298 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=63 pTM=0.495 ipTM=0.329 tol=3.31
2024-07-11 15:08:02,664 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=62 pTM=0.464 ipTM=0.27 tol=2.47
2024-07-11 15:08:09,024 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=62 pTM=0.463 ipTM=0.275 tol=2.99
2024-07-11 15:08:15,391 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=61.6 pTM=0.442 ipTM=0.231 tol=2.53
2024-07-11 15:08:21,758 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=62.4 pTM=0.481 ipTM=0.305 tol=1.97
2024-07-11 15:08:28,120 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=61.4 pTM=0.436 ipTM=0.223 tol=2.32
2024-07-11 15:08:34,480 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=63 pTM=0.493 ipTM=0.329 tol=2.71
2024-07-11 15:08:40,847 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=62 pTM=0.444 ipTM=0.225 tol=3.49
2024-07-11 15:08:47,220 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=61.3 pTM=0.436 ipTM=0.225 tol=2.4
2024-07-11 15:08:53,573 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=61.5 pTM=0.441 ipTM=0.235 tol=2.16
2024-07-11 15:08:59,940 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=61.2 pTM=0.434 ipTM=0.223 tol=2.45
2024-07-11 15:09:06,304 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=63 pTM=0.445 ipTM=0.301 tol=7.88
2024-07-11 15:09:12,653 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=61.2 pTM=0.419 ipTM=0.195 tol=4.43
2024-07-11 15:09:19,017 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=62 pTM=0.438 ipTM=0.243 tol=4.05
2024-07-11 15:09:25,384 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=61.8 pTM=0.42 ipTM=0.254 tol=9.07
2024-07-11 15:09:31,745 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=60.7 pTM=0.427 ipTM=0.215 tol=7.53
2024-07-11 15:09:38,116 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=61.9 pTM=0.438 ipTM=0.23 tol=6.94
2024-07-11 15:09:44,472 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=65.8 pTM=0.54 ipTM=0.446 tol=9.4
2024-07-11 15:09:50,836 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=63.4 pTM=0.425 ipTM=0.24 tol=4.98
2024-07-11 15:09:57,203 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=61.6 pTM=0.426 ipTM=0.216 tol=6.45
2024-07-11 15:10:03,571 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=61.3 pTM=0.425 ipTM=0.208 tol=4.9
2024-07-11 15:10:09,929 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=61.8 pTM=0.449 ipTM=0.252 tol=3.44
2024-07-11 15:10:16,305 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=61.3 pTM=0.427 ipTM=0.207 tol=3.17
2024-07-11 15:10:22,670 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=62 pTM=0.45 ipTM=0.255 tol=3.41
2024-07-11 15:10:29,034 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=61.4 pTM=0.441 ipTM=0.228 tol=2.8
2024-07-11 15:10:29,035 alphafold2_multimer_v3_model_4_seed_000 took 197.3s (30 recycles)
2024-07-11 15:10:35,583 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=60 pTM=0.552 ipTM=0.475
2024-07-11 15:10:41,936 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=63.5 pTM=0.571 ipTM=0.52 tol=7.06
2024-07-11 15:10:48,288 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=63 pTM=0.564 ipTM=0.507 tol=3.99
2024-07-11 15:10:54,661 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=63.5 pTM=0.553 ipTM=0.478 tol=8.93
2024-07-11 15:11:01,026 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=64.4 pTM=0.583 ipTM=0.547 tol=3.81
2024-07-11 15:11:07,384 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=63.6 pTM=0.571 ipTM=0.523 tol=15.1
2024-07-11 15:11:13,747 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=64.4 pTM=0.595 ipTM=0.57 tol=14.2
2024-07-11 15:11:20,111 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=64.1 pTM=0.584 ipTM=0.545 tol=4.32
2024-07-11 15:11:26,472 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=64.9 pTM=0.592 ipTM=0.563 tol=4.05
2024-07-11 15:11:32,840 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=64.6 pTM=0.59 ipTM=0.56 tol=1.91
2024-07-11 15:11:39,202 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=64.2 pTM=0.578 ipTM=0.532 tol=2.07
2024-07-11 15:11:45,564 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=63.8 pTM=0.568 ipTM=0.514 tol=1.17
2024-07-11 15:11:51,935 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=64 pTM=0.569 ipTM=0.515 tol=2.08
2024-07-11 15:11:58,300 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=64.1 pTM=0.58 ipTM=0.538 tol=1.63
2024-07-11 15:12:04,663 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=64.2 pTM=0.576 ipTM=0.532 tol=1.37
2024-07-11 15:12:11,028 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=64 pTM=0.573 ipTM=0.523 tol=2.09
2024-07-11 15:12:17,392 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=63.5 pTM=0.557 ipTM=0.489 tol=1.8
2024-07-11 15:12:23,751 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=64.1 pTM=0.575 ipTM=0.528 tol=1.75
2024-07-11 15:12:30,107 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=63.8 pTM=0.566 ipTM=0.51 tol=2.01
2024-07-11 15:12:36,468 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=64.2 pTM=0.581 ipTM=0.54 tol=1.7
2024-07-11 15:12:42,834 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=63.3 pTM=0.545 ipTM=0.467 tol=1.67
2024-07-11 15:12:49,197 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=63.5 pTM=0.558 ipTM=0.495 tol=1.7
2024-07-11 15:12:55,554 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=63.4 pTM=0.549 ipTM=0.475 tol=1.6
2024-07-11 15:13:01,914 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=63.3 pTM=0.545 ipTM=0.468 tol=2.94
2024-07-11 15:13:08,279 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=63 pTM=0.542 ipTM=0.46 tol=2.69
2024-07-11 15:13:14,633 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=63.4 pTM=0.555 ipTM=0.489 tol=1.41
2024-07-11 15:13:20,996 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=62.1 pTM=0.504 ipTM=0.371 tol=1.29
2024-07-11 15:13:27,362 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=62.9 pTM=0.548 ipTM=0.464 tol=2.84
2024-07-11 15:13:33,727 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=63.9 pTM=0.563 ipTM=0.502 tol=2.56
2024-07-11 15:13:40,096 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=63.8 pTM=0.57 ipTM=0.52 tol=2.9
2024-07-11 15:13:46,471 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=62.6 pTM=0.517 ipTM=0.406 tol=4.12
2024-07-11 15:13:46,471 alphafold2_multimer_v3_model_5_seed_000 took 197.2s (30 recycles)
2024-07-11 15:13:46,668 reranking models by 'multimer' metric
2024-07-11 15:13:47,384 Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
2024-07-11 15:14:11,887 Relaxation took 25.2s
2024-07-11 15:14:11,887 rank_001_alphafold2_multimer_v3_model_5_seed_000 pLDDT=62.6 pTM=0.517 ipTM=0.406
2024-07-11 15:14:41,973 Relaxation took 30.1s
2024-07-11 15:14:41,973 rank_002_alphafold2_multimer_v3_model_3_seed_000 pLDDT=61 pTM=0.492 ipTM=0.324
2024-07-11 15:15:03,189 Relaxation took 21.2s
2024-07-11 15:15:03,189 rank_003_alphafold2_multimer_v3_model_2_seed_000 pLDDT=62.3 pTM=0.426 ipTM=0.232
2024-07-11 15:15:25,244 Relaxation took 22.1s
2024-07-11 15:15:25,244 rank_004_alphafold2_multimer_v3_model_4_seed_000 pLDDT=61.4 pTM=0.441 ipTM=0.228
2024-07-11 15:15:50,440 Relaxation took 25.2s
2024-07-11 15:15:50,440 rank_005_alphafold2_multimer_v3_model_1_seed_000 pLDDT=59.9 pTM=0.423 ipTM=0.223
2024-07-11 15:15:51,519 Done