2024-07-11 16:13:51,118 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3)
2024-07-11 16:13:51,459 Running on GPU
2024-07-11 16:14:05,563 Found 6 citations for tools or databases
2024-07-11 16:14:05,563 Query 1/1: NDP_MIIP (length 521)
2024-07-11 16:14:05,996 Sleeping for 6s. Reason: PENDING
2024-07-11 16:14:12,408 Sleeping for 8s. Reason: RUNNING
2024-07-11 16:14:20,809 Sleeping for 10s. Reason: RUNNING
2024-07-11 16:14:31,217 Sleeping for 5s. Reason: RUNNING
2024-07-11 16:14:36,630 Sleeping for 10s. Reason: RUNNING
2024-07-11 16:14:47,042 Sleeping for 5s. Reason: RUNNING
2024-07-11 16:14:52,437 Sleeping for 8s. Reason: RUNNING
2024-07-11 16:15:02,123 Sleeping for 6s. Reason: PENDING
2024-07-11 16:15:08,539 Sleeping for 7s. Reason: RUNNING
2024-07-11 16:15:15,949 Sleeping for 7s. Reason: RUNNING
2024-07-11 16:15:24,507 Setting max_seq=508, max_extra_seq=2048
2024-07-11 16:19:01,410 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=37.7 pTM=0.27 ipTM=0.17
2024-07-11 16:19:07,190 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=36.8 pTM=0.255 ipTM=0.141 tol=16.1
2024-07-11 16:19:12,980 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=37.5 pTM=0.265 ipTM=0.147 tol=13.5
2024-07-11 16:19:18,772 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=38.6 pTM=0.268 ipTM=0.147 tol=9.91
2024-07-11 16:19:24,572 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=39.5 pTM=0.277 ipTM=0.212 tol=11.5
2024-07-11 16:19:30,368 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=39.8 pTM=0.277 ipTM=0.247 tol=5.38
2024-07-11 16:19:36,172 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=40.2 pTM=0.278 ipTM=0.239 tol=5.34
2024-07-11 16:19:41,976 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=40.5 pTM=0.277 ipTM=0.212 tol=5.97
2024-07-11 16:19:47,787 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=41 pTM=0.276 ipTM=0.203 tol=4.55
2024-07-11 16:19:53,596 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=42 pTM=0.284 ipTM=0.225 tol=6.05
2024-07-11 16:19:59,408 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=41.8 pTM=0.279 ipTM=0.211 tol=2.83
2024-07-11 16:20:05,226 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=42.2 pTM=0.286 ipTM=0.239 tol=4.89
2024-07-11 16:20:11,049 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=41.6 pTM=0.276 ipTM=0.157 tol=5.42
2024-07-11 16:20:16,873 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=41.8 pTM=0.281 ipTM=0.165 tol=2.27
2024-07-11 16:20:22,694 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=42.2 pTM=0.286 ipTM=0.255 tol=2.65
2024-07-11 16:20:28,520 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=42.7 pTM=0.284 ipTM=0.202 tol=5.59
2024-07-11 16:20:34,351 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=42.2 pTM=0.281 ipTM=0.194 tol=5.46
2024-07-11 16:20:40,182 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=41.3 pTM=0.278 ipTM=0.211 tol=3.77
2024-07-11 16:20:46,014 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=42.2 pTM=0.283 ipTM=0.245 tol=1.62
2024-07-11 16:20:51,853 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=42.7 pTM=0.277 ipTM=0.178 tol=2.01
2024-07-11 16:20:57,689 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=41.9 pTM=0.282 ipTM=0.213 tol=1.42
2024-07-11 16:21:03,528 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=42.1 pTM=0.279 ipTM=0.191 tol=1.95
2024-07-11 16:21:09,373 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=42.3 pTM=0.279 ipTM=0.217 tol=1.61
2024-07-11 16:21:15,217 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=42.3 pTM=0.278 ipTM=0.193 tol=3.53
2024-07-11 16:21:21,061 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=42.2 pTM=0.279 ipTM=0.194 tol=4.31
2024-07-11 16:21:26,905 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=41.9 pTM=0.278 ipTM=0.208 tol=1.39
2024-07-11 16:21:32,755 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=41.8 pTM=0.281 ipTM=0.261 tol=2.04
2024-07-11 16:21:38,597 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=42.3 pTM=0.28 ipTM=0.188 tol=2.2
2024-07-11 16:21:44,442 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=41.5 pTM=0.275 ipTM=0.171 tol=1.6
2024-07-11 16:21:50,287 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=41.5 pTM=0.279 ipTM=0.213 tol=1.55
2024-07-11 16:21:56,135 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=41.3 pTM=0.276 ipTM=0.212 tol=2.66
2024-07-11 16:21:56,135 alphafold2_multimer_v3_model_1_seed_000 took 350.0s (30 recycles)
2024-07-11 16:22:02,163 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=37.1 pTM=0.269 ipTM=0.146
2024-07-11 16:22:08,012 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=36.7 pTM=0.269 ipTM=0.189 tol=17.4
2024-07-11 16:22:13,847 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=36.2 pTM=0.26 ipTM=0.148 tol=11.3
2024-07-11 16:22:19,699 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=37.1 pTM=0.267 ipTM=0.246 tol=16.1
2024-07-11 16:22:25,552 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=37.4 pTM=0.264 ipTM=0.191 tol=9.09
2024-07-11 16:22:31,403 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=36.7 pTM=0.248 ipTM=0.158 tol=9.05
2024-07-11 16:22:37,266 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=36.9 pTM=0.24 ipTM=0.122 tol=8.77
2024-07-11 16:22:43,132 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=37.8 pTM=0.244 ipTM=0.131 tol=6.09
2024-07-11 16:22:48,996 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=39.4 pTM=0.245 ipTM=0.125 tol=5.66
2024-07-11 16:22:54,863 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=38.3 pTM=0.251 ipTM=0.151 tol=8.1
2024-07-11 16:23:00,729 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=38.8 pTM=0.264 ipTM=0.193 tol=7.72
2024-07-11 16:23:06,595 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=38.8 pTM=0.254 ipTM=0.143 tol=6.82
2024-07-11 16:23:12,460 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=38.9 pTM=0.246 ipTM=0.126 tol=10
2024-07-11 16:23:18,326 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=39.2 pTM=0.244 ipTM=0.123 tol=4.5
2024-07-11 16:23:24,189 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=39.3 pTM=0.251 ipTM=0.135 tol=7.39
2024-07-11 16:23:30,059 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=40.7 pTM=0.248 ipTM=0.138 tol=5.87
2024-07-11 16:23:35,928 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=41.3 pTM=0.251 ipTM=0.158 tol=3.93
2024-07-11 16:23:41,798 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=40.9 pTM=0.254 ipTM=0.169 tol=4.12
2024-07-11 16:23:47,671 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=42.6 pTM=0.26 ipTM=0.188 tol=3.76
2024-07-11 16:23:53,540 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=42.3 pTM=0.26 ipTM=0.187 tol=3.75
2024-07-11 16:23:59,412 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=42.1 pTM=0.256 ipTM=0.168 tol=4.85
2024-07-11 16:24:05,281 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=42.4 pTM=0.261 ipTM=0.193 tol=5.24
2024-07-11 16:24:11,151 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=42.3 pTM=0.259 ipTM=0.178 tol=4.02
2024-07-11 16:24:17,023 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=42.3 pTM=0.259 ipTM=0.183 tol=2.58
2024-07-11 16:24:22,897 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=42.4 pTM=0.257 ipTM=0.172 tol=2.25
2024-07-11 16:24:28,771 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=42.6 pTM=0.257 ipTM=0.182 tol=4.25
2024-07-11 16:24:34,645 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=42.7 pTM=0.258 ipTM=0.18 tol=3.22
2024-07-11 16:24:40,517 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=42.4 pTM=0.25 ipTM=0.154 tol=2.38
2024-07-11 16:24:46,388 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=42.5 pTM=0.257 ipTM=0.167 tol=1.78
2024-07-11 16:24:52,260 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=42.3 pTM=0.253 ipTM=0.167 tol=1.97
2024-07-11 16:24:58,133 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=42.3 pTM=0.258 ipTM=0.182 tol=2.5
2024-07-11 16:24:58,133 alphafold2_multimer_v3_model_2_seed_000 took 181.8s (30 recycles)
2024-07-11 16:25:04,208 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=37.3 pTM=0.272 ipTM=0.149
2024-07-11 16:25:10,107 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=37.7 pTM=0.26 ipTM=0.143 tol=15.8
2024-07-11 16:25:16,001 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=37.9 pTM=0.262 ipTM=0.15 tol=10.2
2024-07-11 16:25:21,900 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=39.4 pTM=0.272 ipTM=0.223 tol=9.48
2024-07-11 16:25:27,789 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=39.8 pTM=0.265 ipTM=0.157 tol=11.8
2024-07-11 16:25:33,672 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=40.2 pTM=0.262 ipTM=0.144 tol=7.46
2024-07-11 16:25:39,551 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=39 pTM=0.267 ipTM=0.145 tol=12.7
2024-07-11 16:25:45,430 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=41.1 pTM=0.27 ipTM=0.162 tol=6.99
2024-07-11 16:25:51,317 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=41.6 pTM=0.264 ipTM=0.15 tol=9.59
2024-07-11 16:25:57,195 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=42.7 pTM=0.288 ipTM=0.287 tol=13.6
2024-07-11 16:26:03,082 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=42.8 pTM=0.283 ipTM=0.174 tol=8.91
2024-07-11 16:26:08,969 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=44.5 pTM=0.289 ipTM=0.306 tol=7.9
2024-07-11 16:26:14,859 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=44.2 pTM=0.292 ipTM=0.168 tol=6.25
2024-07-11 16:26:20,733 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=43.9 pTM=0.316 ipTM=0.251 tol=9.74
2024-07-11 16:26:26,614 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=44.3 pTM=0.335 ipTM=0.312 tol=8.45
2024-07-11 16:26:32,484 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=45.2 pTM=0.361 ipTM=0.394 tol=14
2024-07-11 16:26:38,347 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=48.5 pTM=0.419 ipTM=0.578 tol=4.62
2024-07-11 16:26:44,212 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=49.1 pTM=0.446 ipTM=0.667 tol=4.69
2024-07-11 16:26:50,078 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=48.8 pTM=0.448 ipTM=0.676 tol=4.88
2024-07-11 16:26:55,947 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=50.2 pTM=0.464 ipTM=0.72 tol=3.91
2024-07-11 16:27:01,821 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=50.4 pTM=0.466 ipTM=0.729 tol=3.69
2024-07-11 16:27:07,694 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=50.7 pTM=0.469 ipTM=0.737 tol=2.06
2024-07-11 16:27:13,567 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=50.6 pTM=0.467 ipTM=0.734 tol=1.94
2024-07-11 16:27:19,422 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=51.4 pTM=0.485 ipTM=0.742 tol=15
2024-07-11 16:27:25,269 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=52.9 pTM=0.512 ipTM=0.769 tol=6.43
2024-07-11 16:27:31,117 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=54.1 pTM=0.532 ipTM=0.795 tol=2.79
2024-07-11 16:27:36,966 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=54.7 pTM=0.542 ipTM=0.805 tol=2.17
2024-07-11 16:27:42,813 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=55 pTM=0.544 ipTM=0.81 tol=1.9
2024-07-11 16:27:48,658 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=54.8 pTM=0.549 ipTM=0.808 tol=2.48
2024-07-11 16:27:54,503 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=55.3 pTM=0.551 ipTM=0.816 tol=1.83
2024-07-11 16:28:00,348 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=56.4 pTM=0.584 ipTM=0.817 tol=2.86
2024-07-11 16:28:00,349 alphafold2_multimer_v3_model_3_seed_000 took 182.0s (30 recycles)
2024-07-11 16:28:06,384 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=36.7 pTM=0.278 ipTM=0.201
2024-07-11 16:28:12,264 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=38.1 pTM=0.266 ipTM=0.159 tol=19.6
2024-07-11 16:28:18,150 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=38.3 pTM=0.243 ipTM=0.146 tol=16.1
2024-07-11 16:28:24,018 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=39.2 pTM=0.275 ipTM=0.215 tol=17.9
2024-07-11 16:28:29,895 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=40.9 pTM=0.266 ipTM=0.179 tol=9.23
2024-07-11 16:28:35,775 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=40.1 pTM=0.26 ipTM=0.178 tol=8.7
2024-07-11 16:28:41,658 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=40.4 pTM=0.262 ipTM=0.171 tol=6.83
2024-07-11 16:28:47,536 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=40.8 pTM=0.266 ipTM=0.209 tol=4.03
2024-07-11 16:28:53,412 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=40.7 pTM=0.274 ipTM=0.173 tol=4.29
2024-07-11 16:28:59,288 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=41.2 pTM=0.278 ipTM=0.234 tol=4.71
2024-07-11 16:29:05,163 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=39.3 pTM=0.269 ipTM=0.187 tol=5.9
2024-07-11 16:29:11,046 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=39.9 pTM=0.254 ipTM=0.148 tol=6.85
2024-07-11 16:29:16,929 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=40 pTM=0.26 ipTM=0.152 tol=4.69
2024-07-11 16:29:22,814 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=40 pTM=0.255 ipTM=0.155 tol=4.93
2024-07-11 16:29:28,696 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=39.5 pTM=0.255 ipTM=0.133 tol=6.37
2024-07-11 16:29:34,578 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=40.4 pTM=0.256 ipTM=0.145 tol=5.73
2024-07-11 16:29:40,455 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=39.9 pTM=0.251 ipTM=0.144 tol=6.35
2024-07-11 16:29:46,335 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=39.8 pTM=0.256 ipTM=0.142 tol=5.45
2024-07-11 16:29:52,216 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=40.4 pTM=0.258 ipTM=0.151 tol=4.5
2024-07-11 16:29:58,103 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=40.2 pTM=0.254 ipTM=0.139 tol=8.18
2024-07-11 16:30:03,987 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=38 pTM=0.26 ipTM=0.138 tol=11.6
2024-07-11 16:30:09,873 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=40.3 pTM=0.258 ipTM=0.157 tol=7.84
2024-07-11 16:30:15,755 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=40.5 pTM=0.257 ipTM=0.147 tol=5.57
2024-07-11 16:30:21,638 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=40.2 pTM=0.255 ipTM=0.136 tol=6.62
2024-07-11 16:30:27,525 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=40.8 pTM=0.257 ipTM=0.141 tol=8.12
2024-07-11 16:30:33,403 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=40.4 pTM=0.256 ipTM=0.138 tol=11.4
2024-07-11 16:30:39,280 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=40.9 pTM=0.258 ipTM=0.149 tol=7.47
2024-07-11 16:30:45,157 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=40.7 pTM=0.255 ipTM=0.129 tol=6.27
2024-07-11 16:30:51,041 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=41.1 pTM=0.26 ipTM=0.135 tol=6.23
2024-07-11 16:30:56,920 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=40.7 pTM=0.258 ipTM=0.14 tol=2.62
2024-07-11 16:31:02,800 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=40.1 pTM=0.257 ipTM=0.137 tol=4.67
2024-07-11 16:31:02,800 alphafold2_multimer_v3_model_4_seed_000 took 182.3s (30 recycles)
2024-07-11 16:31:08,881 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=35.5 pTM=0.266 ipTM=0.134
2024-07-11 16:31:14,761 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=38.1 pTM=0.314 ipTM=0.289 tol=13.4
2024-07-11 16:31:20,638 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=40.5 pTM=0.353 ipTM=0.423 tol=11
2024-07-11 16:31:26,523 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=40.9 pTM=0.313 ipTM=0.227 tol=9.61
2024-07-11 16:31:32,406 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=44.7 pTM=0.374 ipTM=0.355 tol=6.8
2024-07-11 16:31:38,291 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=41.5 pTM=0.299 ipTM=0.18 tol=5.81
2024-07-11 16:31:44,187 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=42.2 pTM=0.306 ipTM=0.208 tol=3.51
2024-07-11 16:31:50,077 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=41.1 pTM=0.287 ipTM=0.177 tol=5.51
2024-07-11 16:31:55,970 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=41.6 pTM=0.282 ipTM=0.16 tol=6.54
2024-07-11 16:32:01,865 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=41.3 pTM=0.276 ipTM=0.161 tol=9.64
2024-07-11 16:32:07,761 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=41.2 pTM=0.277 ipTM=0.205 tol=10.7
2024-07-11 16:32:13,653 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=41.1 pTM=0.275 ipTM=0.182 tol=6.78
2024-07-11 16:32:19,532 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=41.8 pTM=0.287 ipTM=0.156 tol=17.5
2024-07-11 16:32:25,408 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=41 pTM=0.269 ipTM=0.157 tol=9.08
2024-07-11 16:32:31,292 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=41.1 pTM=0.269 ipTM=0.157 tol=9.91
2024-07-11 16:32:37,185 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=41.3 pTM=0.27 ipTM=0.164 tol=7.68
2024-07-11 16:32:43,077 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=41.6 pTM=0.265 ipTM=0.161 tol=7.23
2024-07-11 16:32:48,972 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=41.1 pTM=0.272 ipTM=0.179 tol=7.26
2024-07-11 16:32:54,859 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=40.8 pTM=0.269 ipTM=0.159 tol=10.9
2024-07-11 16:33:00,743 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=41.2 pTM=0.275 ipTM=0.182 tol=13.6
2024-07-11 16:33:06,626 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=41 pTM=0.275 ipTM=0.176 tol=8.01
2024-07-11 16:33:12,509 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=41.4 pTM=0.272 ipTM=0.166 tol=5.45
2024-07-11 16:33:18,391 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=41.5 pTM=0.266 ipTM=0.161 tol=13.1
2024-07-11 16:33:24,269 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=40.8 pTM=0.269 ipTM=0.157 tol=11.6
2024-07-11 16:33:30,151 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=42 pTM=0.267 ipTM=0.157 tol=8.05
2024-07-11 16:33:36,032 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=41.6 pTM=0.268 ipTM=0.159 tol=6.21
2024-07-11 16:33:41,910 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=41.4 pTM=0.268 ipTM=0.167 tol=11.7
2024-07-11 16:33:47,794 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=41.9 pTM=0.27 ipTM=0.162 tol=5.3
2024-07-11 16:33:53,679 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=42.1 pTM=0.268 ipTM=0.162 tol=5.27
2024-07-11 16:33:59,551 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=41.3 pTM=0.268 ipTM=0.157 tol=12.1
2024-07-11 16:34:05,433 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=41.5 pTM=0.267 ipTM=0.159 tol=6.26
2024-07-11 16:34:05,433 alphafold2_multimer_v3_model_5_seed_000 took 182.4s (30 recycles)
2024-07-11 16:34:05,618 reranking models by 'multimer' metric
2024-07-11 16:34:19,793 Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
2024-07-11 16:34:57,326 Relaxation took 51.7s
2024-07-11 16:34:57,326 rank_001_alphafold2_multimer_v3_model_3_seed_000 pLDDT=56.4 pTM=0.584 ipTM=0.817
2024-07-11 16:35:35,161 Relaxation took 37.8s
2024-07-11 16:35:35,161 rank_002_alphafold2_multimer_v3_model_1_seed_000 pLDDT=41.3 pTM=0.276 ipTM=0.212
2024-07-11 16:35:57,105 Relaxation took 21.9s
2024-07-11 16:35:57,106 rank_003_alphafold2_multimer_v3_model_2_seed_000 pLDDT=42.3 pTM=0.258 ipTM=0.182
2024-07-11 16:36:22,160 Relaxation took 25.1s
2024-07-11 16:36:22,160 rank_004_alphafold2_multimer_v3_model_5_seed_000 pLDDT=41.5 pTM=0.267 ipTM=0.159
2024-07-11 16:36:48,775 Relaxation took 26.6s
2024-07-11 16:36:48,775 rank_005_alphafold2_multimer_v3_model_4_seed_000 pLDDT=40.1 pTM=0.257 ipTM=0.137
2024-07-11 16:36:49,821 Done