2024-07-11 16:16:01,834 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3)
2024-07-11 16:16:02,154 Running on GPU
2024-07-11 16:16:10,161 Found 6 citations for tools or databases
2024-07-11 16:16:10,161 Query 1/1: NEBL_NC336 (length 1212)
2024-07-11 16:16:10,651 Sleeping for 5s. Reason: PENDING
2024-07-11 16:16:16,069 Sleeping for 9s. Reason: RUNNING
2024-07-11 16:16:25,470 Sleeping for 9s. Reason: RUNNING
2024-07-11 16:16:34,888 Sleeping for 10s. Reason: RUNNING
2024-07-11 16:16:45,287 Sleeping for 9s. Reason: RUNNING
2024-07-11 16:16:54,678 Sleeping for 6s. Reason: RUNNING
2024-07-11 16:17:01,073 Sleeping for 10s. Reason: RUNNING
2024-07-11 16:17:11,482 Sleeping for 10s. Reason: RUNNING
2024-07-11 16:17:21,888 Sleeping for 9s. Reason: RUNNING
2024-07-11 16:17:31,308 Sleeping for 7s. Reason: RUNNING
2024-07-11 16:17:38,724 Sleeping for 10s. Reason: RUNNING
2024-07-11 16:17:49,142 Sleeping for 10s. Reason: RUNNING
2024-07-11 16:17:59,544 Sleeping for 7s. Reason: RUNNING
2024-07-11 16:18:06,946 Sleeping for 8s. Reason: RUNNING
2024-07-11 16:18:15,366 Sleeping for 5s. Reason: RUNNING
2024-07-11 16:18:20,783 Sleeping for 9s. Reason: RUNNING
2024-07-11 16:18:30,193 Sleeping for 9s. Reason: RUNNING
2024-07-11 16:18:39,593 Sleeping for 6s. Reason: RUNNING
2024-07-11 16:18:47,747 Sleeping for 5s. Reason: PENDING
2024-07-11 16:18:53,143 Sleeping for 9s. Reason: RUNNING
2024-07-11 16:19:02,553 Sleeping for 5s. Reason: RUNNING
2024-07-11 16:19:07,949 Sleeping for 5s. Reason: RUNNING
2024-07-11 16:19:13,346 Sleeping for 5s. Reason: RUNNING
2024-07-11 16:19:18,753 Sleeping for 5s. Reason: RUNNING
2024-07-11 16:19:24,151 Sleeping for 6s. Reason: RUNNING
2024-07-11 16:19:30,564 Sleeping for 9s. Reason: RUNNING
2024-07-11 16:19:39,978 Sleeping for 6s. Reason: RUNNING
2024-07-11 16:19:46,373 Sleeping for 5s. Reason: RUNNING
2024-07-11 16:19:51,777 Sleeping for 6s. Reason: RUNNING
2024-07-11 16:19:58,192 Sleeping for 6s. Reason: RUNNING
2024-07-11 16:20:08,401 Setting max_seq=508, max_extra_seq=2048
2024-07-11 16:23:37,147 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=24.4 pTM=0.188 ipTM=0.173
2024-07-11 16:24:12,745 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=24.2 pTM=0.2 ipTM=0.231 tol=25.5
2024-07-11 16:24:48,468 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=24.4 pTM=0.204 ipTM=0.249 tol=15.6
2024-07-11 16:25:24,286 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=25.1 pTM=0.204 ipTM=0.246 tol=11
2024-07-11 16:26:00,138 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=25.9 pTM=0.205 ipTM=0.251 tol=10.4
2024-07-11 16:26:36,011 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=26.2 pTM=0.205 ipTM=0.254 tol=6.35
2024-07-11 16:27:11,926 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=26.5 pTM=0.204 ipTM=0.254 tol=6.27
2024-07-11 16:27:47,849 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=26.4 pTM=0.204 ipTM=0.254 tol=7.08
2024-07-11 16:28:23,786 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=26.7 pTM=0.204 ipTM=0.251 tol=3.92
2024-07-11 16:28:59,733 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=27.3 pTM=0.203 ipTM=0.253 tol=5.8
2024-07-11 16:29:35,654 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=26.7 pTM=0.206 ipTM=0.271 tol=5.48
2024-07-11 16:30:11,596 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=27.2 pTM=0.205 ipTM=0.27 tol=4.1
2024-07-11 16:30:47,539 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=27 pTM=0.206 ipTM=0.268 tol=4
2024-07-11 16:31:23,506 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=27.4 pTM=0.206 ipTM=0.27 tol=4.49
2024-07-11 16:31:59,466 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=27.5 pTM=0.207 ipTM=0.269 tol=6.43
2024-07-11 16:32:35,433 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=27.8 pTM=0.206 ipTM=0.271 tol=5.32
2024-07-11 16:33:11,417 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=27.8 pTM=0.206 ipTM=0.27 tol=4.14
2024-07-11 16:33:47,398 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=28.5 pTM=0.207 ipTM=0.275 tol=4
2024-07-11 16:34:23,401 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=28.2 pTM=0.206 ipTM=0.269 tol=2.79
2024-07-11 16:34:59,380 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=27.8 pTM=0.206 ipTM=0.269 tol=3.38
2024-07-11 16:35:35,342 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=27.7 pTM=0.206 ipTM=0.273 tol=5.22
2024-07-11 16:36:11,333 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=27.6 pTM=0.206 ipTM=0.272 tol=2.34
2024-07-11 16:36:47,318 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=27.6 pTM=0.207 ipTM=0.277 tol=3.85
2024-07-11 16:37:23,345 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=28 pTM=0.207 ipTM=0.272 tol=3.49
2024-07-11 16:37:59,349 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=27.8 pTM=0.207 ipTM=0.275 tol=2.46
2024-07-11 16:38:35,377 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=27.9 pTM=0.207 ipTM=0.277 tol=1.91
2024-07-11 16:39:11,390 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=28.2 pTM=0.207 ipTM=0.278 tol=1.99
2024-07-11 16:39:47,392 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=28 pTM=0.206 ipTM=0.271 tol=2.56
2024-07-11 16:40:23,431 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=28.5 pTM=0.205 ipTM=0.264 tol=2.57
2024-07-11 16:40:59,429 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=28.2 pTM=0.206 ipTM=0.271 tol=3.98
2024-07-11 16:41:35,467 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=28.3 pTM=0.206 ipTM=0.268 tol=3.68
2024-07-11 16:41:35,468 alphafold2_multimer_v3_model_1_seed_000 took 1236.8s (30 recycles)
2024-07-11 16:42:12,349 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=26.3 pTM=0.183 ipTM=0.158
2024-07-11 16:42:48,491 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=26.2 pTM=0.189 ipTM=0.174 tol=16.1
2024-07-11 16:43:24,601 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=25.6 pTM=0.193 ipTM=0.19 tol=14.8
2024-07-11 16:44:00,714 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=26.1 pTM=0.195 ipTM=0.219 tol=10.3
2024-07-11 16:44:36,839 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=27.2 pTM=0.194 ipTM=0.22 tol=6.81
2024-07-11 16:45:12,936 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=28.3 pTM=0.2 ipTM=0.258 tol=5.79
2024-07-11 16:45:49,088 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=29.1 pTM=0.197 ipTM=0.248 tol=3.92
2024-07-11 16:46:25,223 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=29 pTM=0.197 ipTM=0.251 tol=3.72
2024-07-11 16:47:01,349 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=29.2 pTM=0.197 ipTM=0.25 tol=4.26
2024-07-11 16:47:37,462 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=29.8 pTM=0.197 ipTM=0.25 tol=3.16
2024-07-11 16:48:13,563 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=28.7 pTM=0.196 ipTM=0.25 tol=3.78
2024-07-11 16:48:49,698 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=29.3 pTM=0.196 ipTM=0.25 tol=3.27
2024-07-11 16:49:25,822 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=28.6 pTM=0.197 ipTM=0.25 tol=3.17
2024-07-11 16:50:01,932 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=28.8 pTM=0.198 ipTM=0.25 tol=2.88
2024-07-11 16:50:38,029 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=29.4 pTM=0.197 ipTM=0.247 tol=2.61
2024-07-11 16:51:14,192 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=29.4 pTM=0.197 ipTM=0.249 tol=3.01
2024-07-11 16:51:50,317 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=29.6 pTM=0.196 ipTM=0.247 tol=3.24
2024-07-11 16:52:26,409 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=30.3 pTM=0.197 ipTM=0.251 tol=3.25
2024-07-11 16:53:02,530 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=29.8 pTM=0.195 ipTM=0.245 tol=2.8
2024-07-11 16:53:38,616 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=29.2 pTM=0.196 ipTM=0.245 tol=2.95
2024-07-11 16:54:14,708 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=29.5 pTM=0.196 ipTM=0.245 tol=2.97
2024-07-11 16:54:50,828 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=29.4 pTM=0.197 ipTM=0.245 tol=3.61
2024-07-11 16:55:26,904 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=29 pTM=0.196 ipTM=0.244 tol=3.85
2024-07-11 16:56:02,963 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=29.2 pTM=0.196 ipTM=0.244 tol=5.21
2024-07-11 16:56:39,033 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=29.8 pTM=0.195 ipTM=0.244 tol=4.06
2024-07-11 16:57:15,076 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=29 pTM=0.197 ipTM=0.244 tol=4.21
2024-07-11 16:57:51,151 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=29.1 pTM=0.197 ipTM=0.245 tol=4.2
2024-07-11 16:58:27,222 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=29.4 pTM=0.196 ipTM=0.242 tol=3.62
2024-07-11 16:59:03,261 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=29.9 pTM=0.195 ipTM=0.237 tol=3.65
2024-07-11 16:59:39,283 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=29.2 pTM=0.197 ipTM=0.243 tol=4.55
2024-07-11 17:00:15,308 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=29.4 pTM=0.196 ipTM=0.24 tol=3.68
2024-07-11 17:00:15,309 alphafold2_multimer_v3_model_2_seed_000 took 1118.9s (30 recycles)
2024-07-11 17:00:52,321 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=24.6 pTM=0.177 ipTM=0.164
2024-07-11 17:01:28,541 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=23.1 pTM=0.192 ipTM=0.214 tol=28.9
2024-07-11 17:02:04,817 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=23.4 pTM=0.197 ipTM=0.244 tol=16.1
2024-07-11 17:02:41,083 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=23.8 pTM=0.201 ipTM=0.247 tol=19.9
2024-07-11 17:03:17,343 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=24.1 pTM=0.2 ipTM=0.243 tol=14.2
2024-07-11 17:03:53,591 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=24.6 pTM=0.202 ipTM=0.252 tol=13.7
2024-07-11 17:04:29,845 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=25.2 pTM=0.203 ipTM=0.249 tol=9.38
2024-07-11 17:05:06,115 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=25.1 pTM=0.204 ipTM=0.247 tol=10.2
2024-07-11 17:05:42,376 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=25.5 pTM=0.205 ipTM=0.251 tol=5.85
2024-07-11 17:06:18,660 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=26 pTM=0.205 ipTM=0.253 tol=8.29
2024-07-11 17:06:54,920 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=25.3 pTM=0.207 ipTM=0.265 tol=8.88
2024-07-11 17:07:31,178 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=25.9 pTM=0.208 ipTM=0.269 tol=4.13
2024-07-11 17:08:07,453 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=25.6 pTM=0.211 ipTM=0.279 tol=3.36
2024-07-11 17:08:43,698 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=25.7 pTM=0.213 ipTM=0.282 tol=3.02
2024-07-11 17:09:19,947 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=25.8 pTM=0.215 ipTM=0.291 tol=10.1
2024-07-11 17:09:56,212 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=26.1 pTM=0.215 ipTM=0.291 tol=10.1
2024-07-11 17:10:32,460 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=26.3 pTM=0.216 ipTM=0.298 tol=7.43
2024-07-11 17:11:08,736 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=26.8 pTM=0.215 ipTM=0.298 tol=7.95
2024-07-11 17:11:45,014 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=26.4 pTM=0.216 ipTM=0.292 tol=3.76
2024-07-11 17:12:21,276 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=26 pTM=0.218 ipTM=0.294 tol=3.56
2024-07-11 17:12:57,528 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=26 pTM=0.216 ipTM=0.291 tol=3.94
2024-07-11 17:13:33,793 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=26.2 pTM=0.215 ipTM=0.286 tol=3.88
2024-07-11 17:14:10,033 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=25.9 pTM=0.216 ipTM=0.291 tol=5.86
2024-07-11 17:14:46,262 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=26.4 pTM=0.215 ipTM=0.284 tol=6.66
2024-07-11 17:15:22,571 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=27.2 pTM=0.215 ipTM=0.283 tol=7.08
2024-07-11 17:15:58,813 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=26.4 pTM=0.217 ipTM=0.284 tol=8.03
2024-07-11 17:16:35,082 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=26.7 pTM=0.215 ipTM=0.281 tol=6.68
2024-07-11 17:17:11,329 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=26.9 pTM=0.216 ipTM=0.277 tol=5.45
2024-07-11 17:17:47,586 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=27.1 pTM=0.214 ipTM=0.272 tol=8.22
2024-07-11 17:18:23,861 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=26.5 pTM=0.216 ipTM=0.275 tol=3.65
2024-07-11 17:19:00,116 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=26.8 pTM=0.213 ipTM=0.267 tol=4.84
2024-07-11 17:19:00,117 alphafold2_multimer_v3_model_3_seed_000 took 1123.9s (30 recycles)
2024-07-11 17:19:37,226 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=24.8 pTM=0.184 ipTM=0.185
2024-07-11 17:20:13,608 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=24.7 pTM=0.197 ipTM=0.219 tol=24.6
2024-07-11 17:20:49,934 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=25.3 pTM=0.206 ipTM=0.238 tol=17
2024-07-11 17:21:26,239 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=26.2 pTM=0.205 ipTM=0.236 tol=11.4
2024-07-11 17:22:02,552 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=26.6 pTM=0.206 ipTM=0.239 tol=8.23
2024-07-11 17:22:38,831 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=27 pTM=0.207 ipTM=0.245 tol=5.48
2024-07-11 17:23:15,125 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=27.3 pTM=0.207 ipTM=0.242 tol=7.84
2024-07-11 17:23:51,402 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=27.1 pTM=0.207 ipTM=0.24 tol=6.87
2024-07-11 17:24:27,679 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=27.6 pTM=0.206 ipTM=0.241 tol=6.79
2024-07-11 17:25:03,940 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=28.1 pTM=0.209 ipTM=0.25 tol=4.6
2024-07-11 17:25:40,221 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=28.3 pTM=0.213 ipTM=0.259 tol=9.05
2024-07-11 17:26:16,509 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=28.2 pTM=0.213 ipTM=0.258 tol=5.2
2024-07-11 17:26:52,757 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=28 pTM=0.215 ipTM=0.261 tol=6.93
2024-07-11 17:27:29,002 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=28.1 pTM=0.216 ipTM=0.264 tol=4.74
2024-07-11 17:28:05,234 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=28.3 pTM=0.216 ipTM=0.263 tol=5.77
2024-07-11 17:28:41,473 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=28.1 pTM=0.216 ipTM=0.262 tol=6.17
2024-07-11 17:29:17,724 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=28.5 pTM=0.214 ipTM=0.259 tol=6.68
2024-07-11 17:29:54,007 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=28.8 pTM=0.214 ipTM=0.26 tol=4.46
2024-07-11 17:30:30,303 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=28.7 pTM=0.214 ipTM=0.256 tol=3.63
2024-07-11 17:31:06,553 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=28.6 pTM=0.216 ipTM=0.256 tol=7.33
2024-07-11 17:31:42,767 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=28.5 pTM=0.216 ipTM=0.256 tol=5.32
2024-07-11 17:32:19,015 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=28.6 pTM=0.215 ipTM=0.255 tol=3.61
2024-07-11 17:32:55,239 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=28.5 pTM=0.216 ipTM=0.256 tol=2.89
2024-07-11 17:33:31,492 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=29 pTM=0.215 ipTM=0.253 tol=5.18
2024-07-11 17:34:07,749 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=28.7 pTM=0.214 ipTM=0.251 tol=3.04
2024-07-11 17:34:43,989 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=28.8 pTM=0.215 ipTM=0.254 tol=2.73
2024-07-11 17:35:20,227 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=29 pTM=0.215 ipTM=0.255 tol=2.7
2024-07-11 17:35:56,444 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=28.8 pTM=0.218 ipTM=0.256 tol=4.97
2024-07-11 17:36:32,653 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=29.2 pTM=0.214 ipTM=0.25 tol=3.72
2024-07-11 17:37:08,830 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=28.6 pTM=0.217 ipTM=0.251 tol=4.04
2024-07-11 17:37:45,019 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=28.6 pTM=0.214 ipTM=0.246 tol=4.73
2024-07-11 17:37:45,020 alphafold2_multimer_v3_model_4_seed_000 took 1124.0s (30 recycles)
2024-07-11 17:38:22,156 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=23.1 pTM=0.196 ipTM=0.203
2024-07-11 17:38:58,482 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=22.8 pTM=0.205 ipTM=0.222 tol=26.8
2024-07-11 17:39:34,703 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=23.4 pTM=0.201 ipTM=0.217 tol=19.1
2024-07-11 17:40:10,886 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=24.5 pTM=0.202 ipTM=0.211 tol=10.8
2024-07-11 17:40:47,111 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=24.6 pTM=0.201 ipTM=0.201 tol=11.5
2024-07-11 17:41:23,292 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=25 pTM=0.2 ipTM=0.202 tol=8.98
2024-07-11 17:41:59,456 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=25.1 pTM=0.2 ipTM=0.198 tol=8.76
2024-07-11 17:42:35,645 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=25.1 pTM=0.2 ipTM=0.197 tol=7.23
2024-07-11 17:43:11,818 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=25.3 pTM=0.199 ipTM=0.193 tol=7.17
2024-07-11 17:43:47,968 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=25.6 pTM=0.199 ipTM=0.197 tol=7.16
2024-07-11 17:44:24,046 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=25.4 pTM=0.2 ipTM=0.199 tol=6.02
2024-07-11 17:45:00,169 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=25.7 pTM=0.201 ipTM=0.204 tol=7.61
2024-07-11 17:45:36,250 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=25.3 pTM=0.2 ipTM=0.199 tol=4.02
2024-07-11 17:46:12,367 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=25.4 pTM=0.201 ipTM=0.202 tol=4.44
2024-07-11 17:46:48,471 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=25.4 pTM=0.2 ipTM=0.198 tol=7.05
2024-07-11 17:47:24,573 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=25.4 pTM=0.2 ipTM=0.201 tol=8.25
2024-07-11 17:48:00,669 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=25.5 pTM=0.2 ipTM=0.2 tol=7.23
2024-07-11 17:48:36,768 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=25.9 pTM=0.2 ipTM=0.203 tol=7.98
2024-07-11 17:49:12,869 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=25.5 pTM=0.2 ipTM=0.196 tol=7.5
2024-07-11 17:49:48,974 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=25.2 pTM=0.201 ipTM=0.201 tol=4.45
2024-07-11 17:50:25,109 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=25.1 pTM=0.2 ipTM=0.196 tol=9.98
2024-07-11 17:51:01,248 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=25.5 pTM=0.199 ipTM=0.198 tol=6.01
2024-07-11 17:51:37,367 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=25.1 pTM=0.201 ipTM=0.198 tol=7.99
2024-07-11 17:52:13,508 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=25.4 pTM=0.199 ipTM=0.197 tol=8.5
2024-07-11 17:52:49,712 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=25.6 pTM=0.198 ipTM=0.196 tol=9.88
2024-07-11 17:53:25,840 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=25.5 pTM=0.2 ipTM=0.197 tol=10.9
2024-07-11 17:54:01,990 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=25.3 pTM=0.198 ipTM=0.197 tol=6.95
2024-07-11 17:54:38,135 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=25.8 pTM=0.198 ipTM=0.194 tol=9.37
2024-07-11 17:55:14,322 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=25.9 pTM=0.198 ipTM=0.193 tol=6.16
2024-07-11 17:55:50,480 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=25.2 pTM=0.2 ipTM=0.194 tol=10.5
2024-07-11 17:56:26,667 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=25.6 pTM=0.198 ipTM=0.194 tol=9.34
2024-07-11 17:56:26,668 alphafold2_multimer_v3_model_5_seed_000 took 1120.8s (30 recycles)
2024-07-11 17:56:27,559 reranking models by 'multimer' metric
2024-07-11 17:56:45,383 Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
2024-07-11 17:58:50,310 Relaxation took 142.8s
2024-07-11 17:58:50,310 rank_001_alphafold2_multimer_v3_model_3_seed_000 pLDDT=26.8 pTM=0.213 ipTM=0.267
2024-07-11 18:00:41,045 Relaxation took 110.7s
2024-07-11 18:00:41,045 rank_002_alphafold2_multimer_v3_model_1_seed_000 pLDDT=28.3 pTM=0.206 ipTM=0.268
2024-07-11 18:02:35,282 Relaxation took 114.2s
2024-07-11 18:02:35,282 rank_003_alphafold2_multimer_v3_model_4_seed_000 pLDDT=28.6 pTM=0.214 ipTM=0.246
2024-07-11 18:04:20,851 Relaxation took 105.6s
2024-07-11 18:04:20,851 rank_004_alphafold2_multimer_v3_model_2_seed_000 pLDDT=29.4 pTM=0.196 ipTM=0.24
2024-07-11 18:06:29,630 Relaxation took 128.8s
2024-07-11 18:06:29,630 rank_005_alphafold2_multimer_v3_model_5_seed_000 pLDDT=25.6 pTM=0.198 ipTM=0.194
2024-07-11 18:06:33,048 Done