2024-07-11 16:34:06,174 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3) 2024-07-11 16:34:06,503 Running on GPU 2024-07-11 16:34:16,367 Found 6 citations for tools or databases 2024-07-11 16:34:16,367 Query 1/1: NF2L1_DYLT2 (length 970) 2024-07-11 16:34:16,848 Sleeping for 5s. Reason: PENDING 2024-07-11 16:34:22,266 Sleeping for 7s. Reason: RUNNING 2024-07-11 16:34:29,678 Sleeping for 5s. Reason: RUNNING 2024-07-11 16:34:35,087 Sleeping for 10s. Reason: RUNNING 2024-07-11 16:34:45,489 Sleeping for 6s. Reason: RUNNING 2024-07-11 16:34:51,897 Sleeping for 8s. Reason: RUNNING 2024-07-11 16:35:00,294 Sleeping for 10s. Reason: RUNNING 2024-07-11 16:35:12,319 Sleeping for 10s. Reason: PENDING 2024-07-11 16:35:22,733 Sleeping for 9s. Reason: RUNNING 2024-07-11 16:35:32,149 Sleeping for 5s. Reason: RUNNING 2024-07-11 16:35:37,561 Sleeping for 9s. Reason: RUNNING 2024-07-11 16:35:46,982 Sleeping for 8s. Reason: RUNNING 2024-07-11 16:35:57,529 Setting max_seq=508, max_extra_seq=2048 2024-07-11 16:39:24,838 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=39.3 pTM=0.238 ipTM=0.234 2024-07-11 16:39:46,240 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=39.3 pTM=0.237 ipTM=0.163 tol=11.6 2024-07-11 16:40:07,701 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=39.8 pTM=0.235 ipTM=0.179 tol=5.97 2024-07-11 16:40:29,224 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=40 pTM=0.234 ipTM=0.161 tol=5.17 2024-07-11 16:40:50,783 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=39.8 pTM=0.234 ipTM=0.164 tol=4.02 2024-07-11 16:41:12,368 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=39.9 pTM=0.235 ipTM=0.157 tol=4.21 2024-07-11 16:41:33,984 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=40.1 pTM=0.235 ipTM=0.16 tol=4.76 2024-07-11 16:41:55,631 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=39.9 pTM=0.236 ipTM=0.164 tol=2.71 2024-07-11 16:42:17,309 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=39.9 pTM=0.235 ipTM=0.161 tol=2.85 2024-07-11 16:42:38,989 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=39.8 pTM=0.234 ipTM=0.156 tol=3.82 2024-07-11 16:43:00,650 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=39.9 pTM=0.234 ipTM=0.157 tol=2.18 2024-07-11 16:43:22,322 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=39.9 pTM=0.235 ipTM=0.156 tol=1.6 2024-07-11 16:43:43,976 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=40.2 pTM=0.236 ipTM=0.169 tol=3.08 2024-07-11 16:44:05,676 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=40.1 pTM=0.232 ipTM=0.16 tol=2.23 2024-07-11 16:44:27,379 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=40 pTM=0.232 ipTM=0.154 tol=2.47 2024-07-11 16:44:49,037 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=40.2 pTM=0.235 ipTM=0.154 tol=2.37 2024-07-11 16:45:10,742 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=40.3 pTM=0.233 ipTM=0.154 tol=3.71 2024-07-11 16:45:32,417 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=40.2 pTM=0.237 ipTM=0.158 tol=3.01 2024-07-11 16:45:54,105 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=40.4 pTM=0.236 ipTM=0.156 tol=2.26 2024-07-11 16:46:15,814 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=40.4 pTM=0.236 ipTM=0.165 tol=1.75 2024-07-11 16:46:37,515 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=40.2 pTM=0.236 ipTM=0.164 tol=3.14 2024-07-11 16:46:59,216 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=40.3 pTM=0.237 ipTM=0.169 tol=3.37 2024-07-11 16:47:20,914 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=40.3 pTM=0.235 ipTM=0.159 tol=2.82 2024-07-11 16:47:42,613 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=40 pTM=0.237 ipTM=0.164 tol=2.06 2024-07-11 16:48:04,358 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=39.8 pTM=0.234 ipTM=0.16 tol=3.48 2024-07-11 16:48:26,052 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=40.1 pTM=0.234 ipTM=0.162 tol=2.66 2024-07-11 16:48:47,794 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=40.1 pTM=0.232 ipTM=0.156 tol=2.26 2024-07-11 16:49:09,490 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=40 pTM=0.233 ipTM=0.16 tol=4.05 2024-07-11 16:49:31,212 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=40.1 pTM=0.231 ipTM=0.159 tol=3.21 2024-07-11 16:49:52,939 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=40 pTM=0.233 ipTM=0.16 tol=2.57 2024-07-11 16:50:14,667 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=40.3 pTM=0.232 ipTM=0.161 tol=3.33 2024-07-11 16:50:14,668 alphafold2_multimer_v3_model_1_seed_000 took 818.4s (30 recycles) 2024-07-11 16:50:36,988 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=38.6 pTM=0.223 ipTM=0.134 2024-07-11 16:50:58,773 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=39 pTM=0.23 ipTM=0.166 tol=17.9 2024-07-11 16:51:20,548 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=38.9 pTM=0.236 ipTM=0.261 tol=8.61 2024-07-11 16:51:42,329 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=39 pTM=0.234 ipTM=0.191 tol=9.62 2024-07-11 16:52:04,082 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=39.1 pTM=0.243 ipTM=0.323 tol=10 2024-07-11 16:52:25,851 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=39.4 pTM=0.239 ipTM=0.219 tol=6.46 2024-07-11 16:52:47,596 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=39.4 pTM=0.24 ipTM=0.211 tol=6.18 2024-07-11 16:53:09,361 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=39.5 pTM=0.24 ipTM=0.219 tol=4.66 2024-07-11 16:53:31,110 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=39.7 pTM=0.241 ipTM=0.238 tol=2.98 2024-07-11 16:53:52,865 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=39.3 pTM=0.239 ipTM=0.208 tol=3.6 2024-07-11 16:54:14,626 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=39.6 pTM=0.24 ipTM=0.192 tol=2.37 2024-07-11 16:54:36,393 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=39.5 pTM=0.24 ipTM=0.209 tol=3.33 2024-07-11 16:54:58,152 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=39.4 pTM=0.24 ipTM=0.209 tol=3.29 2024-07-11 16:55:19,922 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=39.3 pTM=0.237 ipTM=0.205 tol=3.17 2024-07-11 16:55:41,674 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=39.7 pTM=0.237 ipTM=0.192 tol=3 2024-07-11 16:56:03,431 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=39.9 pTM=0.236 ipTM=0.211 tol=3.89 2024-07-11 16:56:25,202 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=39.8 pTM=0.236 ipTM=0.202 tol=4.63 2024-07-11 16:56:46,978 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=39.9 pTM=0.236 ipTM=0.198 tol=3.75 2024-07-11 16:57:08,775 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=39.6 pTM=0.234 ipTM=0.178 tol=3.07 2024-07-11 16:57:30,544 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=39.9 pTM=0.236 ipTM=0.204 tol=3.44 2024-07-11 16:57:52,332 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=39.3 pTM=0.236 ipTM=0.22 tol=2.19 2024-07-11 16:58:14,113 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=40 pTM=0.234 ipTM=0.217 tol=2.55 2024-07-11 16:58:35,882 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=39.7 pTM=0.236 ipTM=0.216 tol=4.33 2024-07-11 16:58:57,674 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=39.4 pTM=0.236 ipTM=0.23 tol=3.12 2024-07-11 16:59:19,474 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=39.7 pTM=0.238 ipTM=0.241 tol=2.44 2024-07-11 16:59:41,244 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=39.6 pTM=0.236 ipTM=0.221 tol=1.47 2024-07-11 17:00:02,995 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=38.1 pTM=0.236 ipTM=0.219 tol=13.3 2024-07-11 17:00:24,786 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=39.5 pTM=0.235 ipTM=0.215 tol=11.5 2024-07-11 17:00:46,589 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=39.6 pTM=0.234 ipTM=0.201 tol=10.1 2024-07-11 17:01:08,398 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=39.7 pTM=0.235 ipTM=0.215 tol=5.72 2024-07-11 17:01:30,165 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=40 pTM=0.238 ipTM=0.215 tol=4.38 2024-07-11 17:01:30,166 alphafold2_multimer_v3_model_2_seed_000 took 674.9s (30 recycles) 2024-07-11 17:01:52,626 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=38 pTM=0.247 ipTM=0.281 2024-07-11 17:02:14,484 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=36.9 pTM=0.242 ipTM=0.235 tol=16.6 2024-07-11 17:02:36,398 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=38.4 pTM=0.236 ipTM=0.173 tol=13.2 2024-07-11 17:02:58,281 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=37.6 pTM=0.243 ipTM=0.218 tol=9.7 2024-07-11 17:03:20,126 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=37.4 pTM=0.25 ipTM=0.225 tol=15.1 2024-07-11 17:03:41,970 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=37.9 pTM=0.244 ipTM=0.216 tol=9.45 2024-07-11 17:04:03,814 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=37.8 pTM=0.245 ipTM=0.229 tol=5.88 2024-07-11 17:04:25,670 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=37.8 pTM=0.241 ipTM=0.197 tol=8.56 2024-07-11 17:04:47,515 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=38 pTM=0.243 ipTM=0.225 tol=5.41 2024-07-11 17:05:09,358 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=37.9 pTM=0.243 ipTM=0.17 tol=5.5 2024-07-11 17:05:31,196 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=38.2 pTM=0.245 ipTM=0.245 tol=4.21 2024-07-11 17:05:53,039 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=37.9 pTM=0.248 ipTM=0.245 tol=3.83 2024-07-11 17:06:14,860 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=39 pTM=0.253 ipTM=0.344 tol=5.75 2024-07-11 17:06:36,703 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=37.9 pTM=0.242 ipTM=0.194 tol=3.99 2024-07-11 17:06:58,568 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=38.2 pTM=0.243 ipTM=0.27 tol=7.48 2024-07-11 17:07:20,439 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=38.2 pTM=0.245 ipTM=0.223 tol=6.17 2024-07-11 17:07:42,305 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=38.4 pTM=0.254 ipTM=0.406 tol=7.54 2024-07-11 17:08:04,179 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=38 pTM=0.247 ipTM=0.213 tol=4.73 2024-07-11 17:08:26,016 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=38.2 pTM=0.25 ipTM=0.274 tol=9.69 2024-07-11 17:08:47,901 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=37.8 pTM=0.239 ipTM=0.187 tol=7.51 2024-07-11 17:09:09,788 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=38.3 pTM=0.245 ipTM=0.183 tol=9.67 2024-07-11 17:09:31,656 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=38.2 pTM=0.245 ipTM=0.208 tol=9.55 2024-07-11 17:09:53,544 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=38.7 pTM=0.245 ipTM=0.183 tol=6.7 2024-07-11 17:10:15,391 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=39.2 pTM=0.256 ipTM=0.176 tol=9.34 2024-07-11 17:10:37,271 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=38.9 pTM=0.254 ipTM=0.163 tol=6.98 2024-07-11 17:10:59,125 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=39 pTM=0.253 ipTM=0.226 tol=5.86 2024-07-11 17:11:20,974 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=38.5 pTM=0.251 ipTM=0.218 tol=6.64 2024-07-11 17:11:42,797 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=39.1 pTM=0.257 ipTM=0.182 tol=4.81 2024-07-11 17:12:04,648 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=38.6 pTM=0.252 ipTM=0.155 tol=10.3 2024-07-11 17:12:26,472 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=38.6 pTM=0.256 ipTM=0.18 tol=8.69 2024-07-11 17:12:48,289 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=38.9 pTM=0.26 ipTM=0.237 tol=5.18 2024-07-11 17:12:48,290 alphafold2_multimer_v3_model_3_seed_000 took 677.5s (30 recycles) 2024-07-11 17:13:10,768 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=36.2 pTM=0.23 ipTM=0.264 2024-07-11 17:13:32,693 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=36.5 pTM=0.234 ipTM=0.175 tol=17.9 2024-07-11 17:13:54,642 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=36.2 pTM=0.229 ipTM=0.182 tol=10.8 2024-07-11 17:14:16,596 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=37 pTM=0.235 ipTM=0.186 tol=7.16 2024-07-11 17:14:38,566 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=35.8 pTM=0.226 ipTM=0.185 tol=7.28 2024-07-11 17:15:00,523 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=36.8 pTM=0.231 ipTM=0.185 tol=10.5 2024-07-11 17:15:22,473 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=35.8 pTM=0.225 ipTM=0.188 tol=11.7 2024-07-11 17:15:44,449 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=36.8 pTM=0.231 ipTM=0.189 tol=6.15 2024-07-11 17:16:06,395 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=35.7 pTM=0.224 ipTM=0.184 tol=5.36 2024-07-11 17:16:28,332 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=36.8 pTM=0.232 ipTM=0.188 tol=7.65 2024-07-11 17:16:50,223 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=36.3 pTM=0.237 ipTM=0.242 tol=14.8 2024-07-11 17:17:12,139 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=37.5 pTM=0.242 ipTM=0.218 tol=5.54 2024-07-11 17:17:34,088 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=36.4 pTM=0.229 ipTM=0.184 tol=7.89 2024-07-11 17:17:56,046 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=37.1 pTM=0.233 ipTM=0.181 tol=7.14 2024-07-11 17:18:18,024 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=36.2 pTM=0.225 ipTM=0.174 tol=9.97 2024-07-11 17:18:40,019 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=37.3 pTM=0.233 ipTM=0.17 tol=7.01 2024-07-11 17:19:02,000 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=36.2 pTM=0.225 ipTM=0.17 tol=6.48 2024-07-11 17:19:24,008 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=37.2 pTM=0.232 ipTM=0.177 tol=6.85 2024-07-11 17:19:45,996 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=35.9 pTM=0.227 ipTM=0.177 tol=8.53 2024-07-11 17:20:08,000 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=37.2 pTM=0.232 ipTM=0.174 tol=7 2024-07-11 17:20:30,007 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=36.2 pTM=0.227 ipTM=0.172 tol=4.27 2024-07-11 17:20:52,003 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=37.3 pTM=0.234 ipTM=0.174 tol=6.18 2024-07-11 17:21:14,022 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=36.1 pTM=0.232 ipTM=0.325 tol=7.45 2024-07-11 17:21:36,037 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=37.3 pTM=0.243 ipTM=0.35 tol=19.9 2024-07-11 17:21:58,046 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=36.2 pTM=0.237 ipTM=0.362 tol=14.8 2024-07-11 17:22:20,072 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=37.7 pTM=0.24 ipTM=0.377 tol=12.8 2024-07-11 17:22:42,054 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=36.8 pTM=0.244 ipTM=0.29 tol=18 2024-07-11 17:23:04,011 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=38.9 pTM=0.258 ipTM=0.286 tol=10.5 2024-07-11 17:23:25,922 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=39.3 pTM=0.279 ipTM=0.39 tol=6.65 2024-07-11 17:23:47,827 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=40.8 pTM=0.29 ipTM=0.424 tol=8.07 2024-07-11 17:24:09,707 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=40.2 pTM=0.291 ipTM=0.425 tol=5.6 2024-07-11 17:24:09,708 alphafold2_multimer_v3_model_4_seed_000 took 680.8s (30 recycles) 2024-07-11 17:24:32,176 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=37.7 pTM=0.237 ipTM=0.243 2024-07-11 17:24:54,098 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=38.5 pTM=0.248 ipTM=0.155 tol=13.1 2024-07-11 17:25:16,019 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=37.8 pTM=0.235 ipTM=0.309 tol=11.6 2024-07-11 17:25:37,923 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=38.9 pTM=0.237 ipTM=0.167 tol=7.84 2024-07-11 17:25:59,834 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=37.7 pTM=0.234 ipTM=0.16 tol=6.91 2024-07-11 17:26:21,754 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=38.9 pTM=0.242 ipTM=0.302 tol=9 2024-07-11 17:26:43,649 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=38.7 pTM=0.234 ipTM=0.163 tol=7.97 2024-07-11 17:27:05,580 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=38.4 pTM=0.243 ipTM=0.153 tol=11 2024-07-11 17:27:27,477 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=38.6 pTM=0.241 ipTM=0.318 tol=7.64 2024-07-11 17:27:49,380 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=39 pTM=0.248 ipTM=0.167 tol=7.35 2024-07-11 17:28:11,281 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=38.4 pTM=0.244 ipTM=0.155 tol=6.88 2024-07-11 17:28:33,192 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=39 pTM=0.246 ipTM=0.16 tol=4.06 2024-07-11 17:28:55,112 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=38.7 pTM=0.242 ipTM=0.223 tol=4.49 2024-07-11 17:29:17,049 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=38.5 pTM=0.241 ipTM=0.195 tol=5.72 2024-07-11 17:29:38,963 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=38.6 pTM=0.236 ipTM=0.186 tol=6.96 2024-07-11 17:30:00,870 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=38.7 pTM=0.24 ipTM=0.167 tol=4.77 2024-07-11 17:30:22,809 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=38.8 pTM=0.24 ipTM=0.149 tol=3.29 2024-07-11 17:30:44,740 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=38.2 pTM=0.246 ipTM=0.162 tol=4.88 2024-07-11 17:31:06,670 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=38.4 pTM=0.24 ipTM=0.179 tol=5.05 2024-07-11 17:31:28,586 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=39 pTM=0.242 ipTM=0.182 tol=3.88 2024-07-11 17:31:50,518 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=38.5 pTM=0.236 ipTM=0.167 tol=6.3 2024-07-11 17:32:12,451 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=38.5 pTM=0.241 ipTM=0.149 tol=6.64 2024-07-11 17:32:34,419 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=38.7 pTM=0.235 ipTM=0.149 tol=6.61 2024-07-11 17:32:56,329 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=38.7 pTM=0.246 ipTM=0.193 tol=3.71 2024-07-11 17:33:18,248 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=38.3 pTM=0.238 ipTM=0.219 tol=2.75 2024-07-11 17:33:40,154 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=39.2 pTM=0.242 ipTM=0.226 tol=4.36 2024-07-11 17:34:02,073 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=38.2 pTM=0.236 ipTM=0.213 tol=6.75 2024-07-11 17:34:23,994 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=39.1 pTM=0.239 ipTM=0.167 tol=5.31 2024-07-11 17:34:45,907 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=38.5 pTM=0.242 ipTM=0.192 tol=3.9 2024-07-11 17:35:07,822 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=38.8 pTM=0.244 ipTM=0.225 tol=3.6 2024-07-11 17:35:29,718 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=38.6 pTM=0.241 ipTM=0.21 tol=3.24 2024-07-11 17:35:29,719 alphafold2_multimer_v3_model_5_seed_000 took 679.4s (30 recycles) 2024-07-11 17:35:30,303 reranking models by 'multimer' metric 2024-07-11 17:35:55,009 Warning: importing 'simtk.openmm' is deprecated. Import 'openmm' instead. 2024-07-11 17:46:00,982 Relaxation took 630.7s 2024-07-11 17:46:00,982 rank_001_alphafold2_multimer_v3_model_4_seed_000 pLDDT=40.2 pTM=0.291 ipTM=0.425 2024-07-11 17:47:19,703 Relaxation took 78.7s 2024-07-11 17:47:19,703 rank_002_alphafold2_multimer_v3_model_3_seed_000 pLDDT=38.9 pTM=0.26 ipTM=0.237 2024-07-11 17:48:17,943 Relaxation took 58.2s 2024-07-11 17:48:17,943 rank_003_alphafold2_multimer_v3_model_2_seed_000 pLDDT=40 pTM=0.238 ipTM=0.215 2024-07-11 17:49:30,713 Relaxation took 72.8s 2024-07-11 17:49:30,713 rank_004_alphafold2_multimer_v3_model_5_seed_000 pLDDT=38.6 pTM=0.241 ipTM=0.21 2024-07-11 17:50:32,078 Relaxation took 61.4s 2024-07-11 17:50:32,078 rank_005_alphafold2_multimer_v3_model_1_seed_000 pLDDT=40.3 pTM=0.232 ipTM=0.161 2024-07-11 17:50:34,682 Done