2024-07-11 16:39:27,558 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3)
2024-07-11 16:39:27,890 Running on GPU
2024-07-11 16:39:39,852 Found 6 citations for tools or databases
2024-07-11 16:39:39,852 Query 1/1: NGN3_SPRN (length 365)
2024-07-11 16:39:40,269 Sleeping for 7s. Reason: PENDING
2024-07-11 16:39:47,683 Sleeping for 9s. Reason: RUNNING
2024-07-11 16:39:57,090 Sleeping for 8s. Reason: RUNNING
2024-07-11 16:40:06,978 Sleeping for 5s. Reason: PENDING
2024-07-11 16:40:12,380 Sleeping for 8s. Reason: RUNNING
2024-07-11 16:40:22,179 Setting max_seq=508, max_extra_seq=1813
2024-07-11 16:44:03,004 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=33.6 pTM=0.232 ipTM=0.156
2024-07-11 16:44:06,417 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=36.9 pTM=0.287 ipTM=0.215 tol=21.5
2024-07-11 16:44:09,825 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=37.1 pTM=0.279 ipTM=0.189 tol=11.4
2024-07-11 16:44:13,238 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=37.3 pTM=0.275 ipTM=0.178 tol=10
2024-07-11 16:44:16,650 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=38.3 pTM=0.28 ipTM=0.182 tol=8.01
2024-07-11 16:44:20,069 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=38.5 pTM=0.279 ipTM=0.176 tol=7.55
2024-07-11 16:44:23,483 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=38 pTM=0.282 ipTM=0.18 tol=7.05
2024-07-11 16:44:26,898 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=37.8 pTM=0.276 ipTM=0.17 tol=5.66
2024-07-11 16:44:30,312 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=38.1 pTM=0.279 ipTM=0.175 tol=2.96
2024-07-11 16:44:33,726 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=38 pTM=0.279 ipTM=0.174 tol=2.92
2024-07-11 16:44:37,142 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=37.7 pTM=0.28 ipTM=0.174 tol=6.14
2024-07-11 16:44:40,557 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=37.7 pTM=0.277 ipTM=0.169 tol=2.38
2024-07-11 16:44:43,974 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=38.2 pTM=0.284 ipTM=0.177 tol=3.28
2024-07-11 16:44:47,390 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=37.9 pTM=0.279 ipTM=0.169 tol=3.07
2024-07-11 16:44:50,809 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=38.5 pTM=0.282 ipTM=0.176 tol=7.21
2024-07-11 16:44:54,231 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=37.5 pTM=0.278 ipTM=0.17 tol=7.4
2024-07-11 16:44:57,650 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=38.1 pTM=0.28 ipTM=0.174 tol=2.39
2024-07-11 16:45:01,073 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=37.5 pTM=0.277 ipTM=0.166 tol=5.71
2024-07-11 16:45:04,491 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=37.9 pTM=0.28 ipTM=0.172 tol=3.08
2024-07-11 16:45:07,909 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=37.7 pTM=0.278 ipTM=0.168 tol=1.89
2024-07-11 16:45:11,328 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=38.1 pTM=0.282 ipTM=0.177 tol=1.78
2024-07-11 16:45:14,745 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=37.5 pTM=0.277 ipTM=0.167 tol=2.66
2024-07-11 16:45:18,164 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=38.2 pTM=0.281 ipTM=0.177 tol=2.59
2024-07-11 16:45:21,586 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=37.6 pTM=0.276 ipTM=0.167 tol=3.32
2024-07-11 16:45:25,005 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=38.2 pTM=0.279 ipTM=0.174 tol=2.98
2024-07-11 16:45:28,425 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=37.6 pTM=0.278 ipTM=0.169 tol=2.93
2024-07-11 16:45:31,841 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=38 pTM=0.283 ipTM=0.178 tol=7.3
2024-07-11 16:45:35,259 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=37.8 pTM=0.277 ipTM=0.167 tol=5.93
2024-07-11 16:45:38,677 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=38.1 pTM=0.283 ipTM=0.18 tol=2.68
2024-07-11 16:45:42,095 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=38.1 pTM=0.277 ipTM=0.168 tol=8.19
2024-07-11 16:45:45,515 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=38 pTM=0.283 ipTM=0.18 tol=7.51
2024-07-11 16:45:46,777 alphafold2_multimer_v3_model_1_seed_000 took 280.0s (30 recycles)
2024-07-11 16:45:50,272 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=31.1 pTM=0.225 ipTM=0.151
2024-07-11 16:45:53,670 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=34.7 pTM=0.282 ipTM=0.173 tol=11.1
2024-07-11 16:45:57,066 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=34.5 pTM=0.256 ipTM=0.138 tol=9.14
2024-07-11 16:46:00,464 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=34.4 pTM=0.251 ipTM=0.137 tol=6.69
2024-07-11 16:46:03,863 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=34.7 pTM=0.246 ipTM=0.135 tol=4.79
2024-07-11 16:46:07,262 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=34.7 pTM=0.249 ipTM=0.135 tol=2.48
2024-07-11 16:46:10,663 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=35 pTM=0.249 ipTM=0.137 tol=1.66
2024-07-11 16:46:14,062 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=34.7 pTM=0.243 ipTM=0.133 tol=1.96
2024-07-11 16:46:17,464 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=34.7 pTM=0.243 ipTM=0.135 tol=3.06
2024-07-11 16:46:20,865 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=34.5 pTM=0.239 ipTM=0.132 tol=2.95
2024-07-11 16:46:24,267 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=34.7 pTM=0.249 ipTM=0.141 tol=2.88
2024-07-11 16:46:27,668 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=34.7 pTM=0.245 ipTM=0.137 tol=7.04
2024-07-11 16:46:31,072 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=35.3 pTM=0.255 ipTM=0.144 tol=4.23
2024-07-11 16:46:34,473 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=34.8 pTM=0.247 ipTM=0.137 tol=3.25
2024-07-11 16:46:37,878 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=34.6 pTM=0.247 ipTM=0.139 tol=2.95
2024-07-11 16:46:41,282 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=34.7 pTM=0.247 ipTM=0.14 tol=1.31
2024-07-11 16:46:44,689 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=34.5 pTM=0.243 ipTM=0.139 tol=1.97
2024-07-11 16:46:48,093 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=34.3 pTM=0.242 ipTM=0.135 tol=1.57
2024-07-11 16:46:51,497 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=34.5 pTM=0.247 ipTM=0.139 tol=1.81
2024-07-11 16:46:54,902 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=34.5 pTM=0.249 ipTM=0.14 tol=1.44
2024-07-11 16:46:58,308 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=34.6 pTM=0.249 ipTM=0.14 tol=1.33
2024-07-11 16:47:01,710 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=34.6 pTM=0.245 ipTM=0.139 tol=1.09
2024-07-11 16:47:05,113 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=34.6 pTM=0.244 ipTM=0.14 tol=1.58
2024-07-11 16:47:08,517 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=34.5 pTM=0.246 ipTM=0.138 tol=1.26
2024-07-11 16:47:11,924 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=34.2 pTM=0.242 ipTM=0.137 tol=1.57
2024-07-11 16:47:15,327 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=34.2 pTM=0.25 ipTM=0.142 tol=1.54
2024-07-11 16:47:18,733 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=34.5 pTM=0.248 ipTM=0.141 tol=0.992
2024-07-11 16:47:22,138 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=34.5 pTM=0.245 ipTM=0.136 tol=2.03
2024-07-11 16:47:25,543 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=34.6 pTM=0.25 ipTM=0.141 tol=1.21
2024-07-11 16:47:28,948 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=34.5 pTM=0.245 ipTM=0.139 tol=1.59
2024-07-11 16:47:32,354 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=34.4 pTM=0.247 ipTM=0.142 tol=1.23
2024-07-11 16:47:32,354 alphafold2_multimer_v3_model_2_seed_000 took 105.5s (30 recycles)
2024-07-11 16:47:35,870 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=33.9 pTM=0.245 ipTM=0.176
2024-07-11 16:47:39,287 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=36.5 pTM=0.276 ipTM=0.167 tol=9.57
2024-07-11 16:47:42,701 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=36.6 pTM=0.269 ipTM=0.151 tol=5.86
2024-07-11 16:47:46,118 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=35.9 pTM=0.265 ipTM=0.142 tol=3.85
2024-07-11 16:47:49,535 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=36.2 pTM=0.266 ipTM=0.146 tol=6.05
2024-07-11 16:47:52,956 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=36 pTM=0.263 ipTM=0.14 tol=2.96
2024-07-11 16:47:56,376 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=36.2 pTM=0.264 ipTM=0.146 tol=2.41
2024-07-11 16:47:59,797 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=36.1 pTM=0.262 ipTM=0.141 tol=4.43
2024-07-11 16:48:03,219 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=36.1 pTM=0.263 ipTM=0.147 tol=3.79
2024-07-11 16:48:06,640 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=35.9 pTM=0.26 ipTM=0.146 tol=3.02
2024-07-11 16:48:10,060 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=35.9 pTM=0.263 ipTM=0.15 tol=2.64
2024-07-11 16:48:13,483 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=35.9 pTM=0.26 ipTM=0.146 tol=2.12
2024-07-11 16:48:16,904 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=36.3 pTM=0.266 ipTM=0.154 tol=2.3
2024-07-11 16:48:20,325 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=36.4 pTM=0.264 ipTM=0.15 tol=2.25
2024-07-11 16:48:23,747 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=36.7 pTM=0.268 ipTM=0.155 tol=1.87
2024-07-11 16:48:27,168 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=36.2 pTM=0.265 ipTM=0.147 tol=2.01
2024-07-11 16:48:30,592 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=36.6 pTM=0.267 ipTM=0.153 tol=1.93
2024-07-11 16:48:34,016 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=36 pTM=0.263 ipTM=0.144 tol=2.76
2024-07-11 16:48:37,438 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=36.7 pTM=0.268 ipTM=0.157 tol=3.36
2024-07-11 16:48:40,858 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=35.9 pTM=0.264 ipTM=0.148 tol=3.54
2024-07-11 16:48:44,279 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=36.8 pTM=0.271 ipTM=0.161 tol=3.51
2024-07-11 16:48:47,697 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=36 pTM=0.264 ipTM=0.149 tol=2.39
2024-07-11 16:48:51,117 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=37 pTM=0.271 ipTM=0.164 tol=2.89
2024-07-11 16:48:54,539 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=35.8 pTM=0.26 ipTM=0.144 tol=3.26
2024-07-11 16:48:57,960 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=37 pTM=0.272 ipTM=0.166 tol=4.64
2024-07-11 16:49:01,383 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=35.7 pTM=0.262 ipTM=0.144 tol=4.06
2024-07-11 16:49:04,806 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=37.1 pTM=0.273 ipTM=0.168 tol=3.24
2024-07-11 16:49:08,228 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=35.9 pTM=0.26 ipTM=0.143 tol=2.73
2024-07-11 16:49:11,649 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=36.8 pTM=0.273 ipTM=0.166 tol=3.12
2024-07-11 16:49:15,069 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=35.8 pTM=0.258 ipTM=0.141 tol=2.63
2024-07-11 16:49:18,490 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=36.8 pTM=0.271 ipTM=0.165 tol=3
2024-07-11 16:49:18,490 alphafold2_multimer_v3_model_3_seed_000 took 106.0s (30 recycles)
2024-07-11 16:49:21,991 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=33.4 pTM=0.228 ipTM=0.169
2024-07-11 16:49:25,401 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=37.9 pTM=0.285 ipTM=0.179 tol=14.1
2024-07-11 16:49:28,811 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=38.4 pTM=0.282 ipTM=0.171 tol=10.6
2024-07-11 16:49:32,225 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=38.5 pTM=0.277 ipTM=0.159 tol=5.03
2024-07-11 16:49:35,640 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=38.9 pTM=0.281 ipTM=0.165 tol=5.45
2024-07-11 16:49:39,055 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=38.9 pTM=0.278 ipTM=0.16 tol=5.08
2024-07-11 16:49:42,468 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=39 pTM=0.281 ipTM=0.166 tol=5.42
2024-07-11 16:49:45,884 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=38.9 pTM=0.276 ipTM=0.159 tol=2.51
2024-07-11 16:49:49,300 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=39 pTM=0.277 ipTM=0.162 tol=3.52
2024-07-11 16:49:52,716 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=38.9 pTM=0.277 ipTM=0.161 tol=1.82
2024-07-11 16:49:56,129 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=38.8 pTM=0.278 ipTM=0.164 tol=2.09
2024-07-11 16:49:59,543 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=38.6 pTM=0.277 ipTM=0.163 tol=1.66
2024-07-11 16:50:02,957 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=39.2 pTM=0.281 ipTM=0.17 tol=1.92
2024-07-11 16:50:06,367 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=38.9 pTM=0.278 ipTM=0.163 tol=2.34
2024-07-11 16:50:09,781 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=39 pTM=0.28 ipTM=0.166 tol=2.09
2024-07-11 16:50:13,196 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=39 pTM=0.278 ipTM=0.164 tol=1.99
2024-07-11 16:50:16,613 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=39.1 pTM=0.278 ipTM=0.165 tol=2.1
2024-07-11 16:50:20,027 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=39 pTM=0.277 ipTM=0.161 tol=1.74
2024-07-11 16:50:23,443 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=39.1 pTM=0.278 ipTM=0.163 tol=2.85
2024-07-11 16:50:26,857 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=38.8 pTM=0.277 ipTM=0.161 tol=2.41
2024-07-11 16:50:30,271 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=39 pTM=0.281 ipTM=0.168 tol=1.26
2024-07-11 16:50:33,687 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=39 pTM=0.279 ipTM=0.164 tol=1.72
2024-07-11 16:50:37,101 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=39.3 pTM=0.28 ipTM=0.167 tol=2.33
2024-07-11 16:50:40,518 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=38.9 pTM=0.278 ipTM=0.163 tol=2.25
2024-07-11 16:50:43,935 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=39 pTM=0.279 ipTM=0.165 tol=2.11
2024-07-11 16:50:47,350 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=39 pTM=0.279 ipTM=0.165 tol=2.63
2024-07-11 16:50:50,768 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=39 pTM=0.282 ipTM=0.169 tol=2.28
2024-07-11 16:50:54,186 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=39.4 pTM=0.281 ipTM=0.167 tol=3.27
2024-07-11 16:50:57,602 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=39.1 pTM=0.281 ipTM=0.168 tol=1.49
2024-07-11 16:51:01,018 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=39.2 pTM=0.278 ipTM=0.164 tol=2.42
2024-07-11 16:51:04,432 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=39 pTM=0.281 ipTM=0.169 tol=1.44
2024-07-11 16:51:04,433 alphafold2_multimer_v3_model_4_seed_000 took 105.8s (30 recycles)
2024-07-11 16:51:07,958 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=31.1 pTM=0.217 ipTM=0.147
2024-07-11 16:51:11,375 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=35.1 pTM=0.269 ipTM=0.157 tol=12.8
2024-07-11 16:51:14,794 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=35.7 pTM=0.265 ipTM=0.15 tol=8.41
2024-07-11 16:51:18,212 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=35.6 pTM=0.262 ipTM=0.145 tol=6.68
2024-07-11 16:51:21,631 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=35.7 pTM=0.266 ipTM=0.153 tol=6.47
2024-07-11 16:51:25,050 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=35.3 pTM=0.257 ipTM=0.142 tol=3.29
2024-07-11 16:51:28,469 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=35.4 pTM=0.261 ipTM=0.152 tol=2.19
2024-07-11 16:51:31,887 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=35.2 pTM=0.251 ipTM=0.143 tol=1.62
2024-07-11 16:51:35,305 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=35.2 pTM=0.255 ipTM=0.148 tol=3.59
2024-07-11 16:51:38,723 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=35 pTM=0.249 ipTM=0.143 tol=1.8
2024-07-11 16:51:42,141 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=35.1 pTM=0.253 ipTM=0.147 tol=2.46
2024-07-11 16:51:45,560 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=34.9 pTM=0.252 ipTM=0.145 tol=2.26
2024-07-11 16:51:48,976 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=35.8 pTM=0.261 ipTM=0.156 tol=2.19
2024-07-11 16:51:52,394 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=35.2 pTM=0.25 ipTM=0.141 tol=1.66
2024-07-11 16:51:55,810 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=35 pTM=0.255 ipTM=0.153 tol=3.81
2024-07-11 16:51:59,229 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=35.3 pTM=0.251 ipTM=0.139 tol=4.42
2024-07-11 16:52:02,649 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=35.5 pTM=0.252 ipTM=0.145 tol=5.06
2024-07-11 16:52:06,069 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=35 pTM=0.25 ipTM=0.138 tol=4.72
2024-07-11 16:52:09,491 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=35.6 pTM=0.256 ipTM=0.149 tol=5.01
2024-07-11 16:52:12,912 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=35.3 pTM=0.253 ipTM=0.143 tol=3.71
2024-07-11 16:52:16,335 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=35.2 pTM=0.258 ipTM=0.151 tol=4.16
2024-07-11 16:52:19,758 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=35.1 pTM=0.25 ipTM=0.143 tol=3.17
2024-07-11 16:52:23,181 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=35.5 pTM=0.253 ipTM=0.151 tol=5.38
2024-07-11 16:52:26,602 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=35.3 pTM=0.251 ipTM=0.143 tol=5.86
2024-07-11 16:52:30,021 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=35.2 pTM=0.254 ipTM=0.147 tol=4.45
2024-07-11 16:52:33,449 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=34.8 pTM=0.249 ipTM=0.143 tol=3.31
2024-07-11 16:52:36,868 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=35.8 pTM=0.258 ipTM=0.153 tol=4.23
2024-07-11 16:52:40,289 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=35.2 pTM=0.249 ipTM=0.141 tol=5.22
2024-07-11 16:52:43,707 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=36.1 pTM=0.26 ipTM=0.154 tol=6.58
2024-07-11 16:52:47,131 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=35.3 pTM=0.249 ipTM=0.138 tol=4.32
2024-07-11 16:52:50,553 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=35.5 pTM=0.256 ipTM=0.151 tol=9.15
2024-07-11 16:52:50,554 alphafold2_multimer_v3_model_5_seed_000 took 106.0s (30 recycles)
2024-07-11 16:52:50,654 reranking models by 'multimer' metric
2024-07-11 16:53:01,472 Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
2024-07-11 16:53:15,624 Relaxation took 25.0s
2024-07-11 16:53:15,624 rank_001_alphafold2_multimer_v3_model_1_seed_000 pLDDT=38 pTM=0.283 ipTM=0.18
2024-07-11 16:53:26,852 Relaxation took 11.2s
2024-07-11 16:53:26,852 rank_002_alphafold2_multimer_v3_model_4_seed_000 pLDDT=39 pTM=0.281 ipTM=0.169
2024-07-11 16:53:39,697 Relaxation took 12.8s
2024-07-11 16:53:39,698 rank_003_alphafold2_multimer_v3_model_3_seed_000 pLDDT=36.8 pTM=0.271 ipTM=0.165
2024-07-11 16:53:53,548 Relaxation took 13.8s
2024-07-11 16:53:53,548 rank_004_alphafold2_multimer_v3_model_5_seed_000 pLDDT=35.5 pTM=0.256 ipTM=0.151
2024-07-11 16:54:03,837 Relaxation took 10.3s
2024-07-11 16:54:03,837 rank_005_alphafold2_multimer_v3_model_2_seed_000 pLDDT=34.4 pTM=0.247 ipTM=0.142
2024-07-11 16:54:04,664 Done