2024-07-11 16:55:40,776 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3)
2024-07-11 16:55:41,123 Running on GPU
2024-07-11 16:55:55,823 Found 6 citations for tools or databases
2024-07-11 16:55:55,823 Query 1/1: NIPA3_TRI31 (length 835)
2024-07-11 16:55:56,311 Sleeping for 8s. Reason: PENDING
2024-07-11 16:56:04,711 Sleeping for 7s. Reason: RUNNING
2024-07-11 16:56:12,109 Sleeping for 10s. Reason: RUNNING
2024-07-11 16:56:22,514 Sleeping for 5s. Reason: RUNNING
2024-07-11 16:56:27,920 Sleeping for 10s. Reason: RUNNING
2024-07-11 16:56:38,329 Sleeping for 8s. Reason: RUNNING
2024-07-11 16:56:46,745 Sleeping for 8s. Reason: RUNNING
2024-07-11 16:56:55,155 Sleeping for 5s. Reason: RUNNING
2024-07-11 16:57:00,556 Sleeping for 8s. Reason: RUNNING
2024-07-11 16:57:08,974 Sleeping for 5s. Reason: RUNNING
2024-07-11 16:57:14,367 Sleeping for 5s. Reason: RUNNING
2024-07-11 16:57:19,777 Sleeping for 10s. Reason: RUNNING
2024-07-11 16:57:30,182 Sleeping for 9s. Reason: RUNNING
2024-07-11 16:57:39,592 Sleeping for 6s. Reason: RUNNING
2024-07-11 16:57:45,998 Sleeping for 6s. Reason: RUNNING
2024-07-11 16:57:52,404 Sleeping for 5s. Reason: RUNNING
2024-07-11 16:57:57,827 Sleeping for 10s. Reason: RUNNING
2024-07-11 16:58:10,004 Sleeping for 9s. Reason: PENDING
2024-07-11 16:58:19,414 Sleeping for 5s. Reason: RUNNING
2024-07-11 16:58:24,823 Sleeping for 7s. Reason: RUNNING
2024-07-11 16:58:32,252 Sleeping for 10s. Reason: RUNNING
2024-07-11 16:58:42,680 Sleeping for 8s. Reason: RUNNING
2024-07-11 16:58:51,094 Sleeping for 7s. Reason: RUNNING
2024-07-11 16:59:01,540 Setting max_seq=508, max_extra_seq=2048
2024-07-11 17:02:52,352 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=64.9 pTM=0.364 ipTM=0.153
2024-07-11 17:03:06,654 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=66.2 pTM=0.372 ipTM=0.158 tol=7.25
2024-07-11 17:03:20,985 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=66.7 pTM=0.384 ipTM=0.171 tol=4.44
2024-07-11 17:03:35,356 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=66.4 pTM=0.384 ipTM=0.188 tol=3.87
2024-07-11 17:03:49,755 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=66.7 pTM=0.391 ipTM=0.209 tol=3.53
2024-07-11 17:04:04,179 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=66.6 pTM=0.393 ipTM=0.219 tol=4.54
2024-07-11 17:04:18,598 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=66.7 pTM=0.393 ipTM=0.218 tol=2.32
2024-07-11 17:04:33,034 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=65.9 pTM=0.386 ipTM=0.217 tol=1.18
2024-07-11 17:04:47,482 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=66.6 pTM=0.391 ipTM=0.211 tol=1.62
2024-07-11 17:05:01,948 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=66.8 pTM=0.396 ipTM=0.208 tol=1.22
2024-07-11 17:05:16,431 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=66.5 pTM=0.395 ipTM=0.221 tol=0.894
2024-07-11 17:05:30,903 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=66.2 pTM=0.39 ipTM=0.209 tol=0.898
2024-07-11 17:05:45,383 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=66.5 pTM=0.401 ipTM=0.229 tol=1.08
2024-07-11 17:05:59,854 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=66.6 pTM=0.4 ipTM=0.23 tol=0.711
2024-07-11 17:06:14,345 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=66.8 pTM=0.403 ipTM=0.228 tol=1.16
2024-07-11 17:06:28,843 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=66.7 pTM=0.4 ipTM=0.231 tol=0.9
2024-07-11 17:06:43,341 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=66.6 pTM=0.4 ipTM=0.223 tol=0.85
2024-07-11 17:06:57,836 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=66.8 pTM=0.401 ipTM=0.225 tol=0.694
2024-07-11 17:07:12,333 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=66.5 pTM=0.394 ipTM=0.219 tol=0.829
2024-07-11 17:07:26,831 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=66.4 pTM=0.39 ipTM=0.213 tol=0.863
2024-07-11 17:07:41,326 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=66.7 pTM=0.394 ipTM=0.214 tol=1.74
2024-07-11 17:07:55,814 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=66.7 pTM=0.397 ipTM=0.221 tol=1.48
2024-07-11 17:08:10,311 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=66.9 pTM=0.397 ipTM=0.223 tol=0.864
2024-07-11 17:08:24,811 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=66.5 pTM=0.393 ipTM=0.215 tol=1.13
2024-07-11 17:08:39,330 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=66.6 pTM=0.391 ipTM=0.206 tol=0.847
2024-07-11 17:08:53,843 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=66.6 pTM=0.39 ipTM=0.203 tol=0.715
2024-07-11 17:09:08,360 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=66.8 pTM=0.392 ipTM=0.213 tol=1.28
2024-07-11 17:09:22,880 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=66.4 pTM=0.386 ipTM=0.203 tol=1.19
2024-07-11 17:09:37,390 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=66.5 pTM=0.39 ipTM=0.208 tol=0.946
2024-07-11 17:09:51,890 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=66.4 pTM=0.389 ipTM=0.213 tol=0.565
2024-07-11 17:10:06,399 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=66.8 pTM=0.397 ipTM=0.221 tol=0.896
2024-07-11 17:10:06,399 alphafold2_multimer_v3_model_1_seed_000 took 601.7s (30 recycles)
2024-07-11 17:10:21,459 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=64.2 pTM=0.364 ipTM=0.167
2024-07-11 17:10:36,036 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=66.8 pTM=0.389 ipTM=0.301 tol=20.9
2024-07-11 17:10:50,598 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=66.4 pTM=0.385 ipTM=0.226 tol=6.02
2024-07-11 17:11:05,175 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=66.3 pTM=0.376 ipTM=0.21 tol=4.57
2024-07-11 17:11:19,752 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=66.8 pTM=0.375 ipTM=0.207 tol=2.88
2024-07-11 17:11:34,318 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=67.1 pTM=0.383 ipTM=0.227 tol=3.36
2024-07-11 17:11:48,886 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=66.4 pTM=0.376 ipTM=0.202 tol=1.84
2024-07-11 17:12:03,449 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=66.3 pTM=0.374 ipTM=0.208 tol=1.06
2024-07-11 17:12:18,023 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=66.9 pTM=0.378 ipTM=0.201 tol=1.45
2024-07-11 17:12:32,586 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=66.6 pTM=0.375 ipTM=0.203 tol=1.51
2024-07-11 17:12:47,158 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=66.8 pTM=0.378 ipTM=0.195 tol=1.35
2024-07-11 17:13:01,733 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=66.5 pTM=0.372 ipTM=0.197 tol=0.997
2024-07-11 17:13:16,289 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=66.8 pTM=0.376 ipTM=0.193 tol=1.33
2024-07-11 17:13:30,842 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=66.9 pTM=0.377 ipTM=0.2 tol=0.961
2024-07-11 17:13:45,399 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=67 pTM=0.379 ipTM=0.206 tol=0.811
2024-07-11 17:13:59,971 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=66.5 pTM=0.37 ipTM=0.204 tol=1.24
2024-07-11 17:14:14,552 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=66.7 pTM=0.374 ipTM=0.198 tol=1.05
2024-07-11 17:14:29,121 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=66.9 pTM=0.377 ipTM=0.208 tol=1.4
2024-07-11 17:14:43,680 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=66.5 pTM=0.376 ipTM=0.204 tol=1.6
2024-07-11 17:14:58,239 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=66 pTM=0.364 ipTM=0.197 tol=1.81
2024-07-11 17:15:12,815 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=66.8 pTM=0.374 ipTM=0.198 tol=1.44
2024-07-11 17:15:27,389 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=66.4 pTM=0.369 ipTM=0.202 tol=1.24
2024-07-11 17:15:41,960 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=67.1 pTM=0.377 ipTM=0.2 tol=1.54
2024-07-11 17:15:56,520 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=66.4 pTM=0.369 ipTM=0.198 tol=1.24
2024-07-11 17:16:11,084 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=66.9 pTM=0.377 ipTM=0.2 tol=1.06
2024-07-11 17:16:25,648 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=66.2 pTM=0.366 ipTM=0.196 tol=1.93
2024-07-11 17:16:40,204 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=66.7 pTM=0.372 ipTM=0.198 tol=1.77
2024-07-11 17:16:54,756 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=66.9 pTM=0.376 ipTM=0.195 tol=1.37
2024-07-11 17:17:09,311 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=66.8 pTM=0.377 ipTM=0.195 tol=1.37
2024-07-11 17:17:23,865 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=66.5 pTM=0.372 ipTM=0.204 tol=3.67
2024-07-11 17:17:38,430 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=66.9 pTM=0.375 ipTM=0.207 tol=2.33
2024-07-11 17:17:38,431 alphafold2_multimer_v3_model_2_seed_000 took 451.6s (30 recycles)
2024-07-11 17:17:53,488 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=63.7 pTM=0.374 ipTM=0.154
2024-07-11 17:18:08,077 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=63.6 pTM=0.384 ipTM=0.168 tol=15.2
2024-07-11 17:18:22,654 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=64.1 pTM=0.392 ipTM=0.179 tol=4.63
2024-07-11 17:18:37,217 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=64.2 pTM=0.391 ipTM=0.175 tol=2.96
2024-07-11 17:18:51,774 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=64.4 pTM=0.392 ipTM=0.182 tol=2.61
2024-07-11 17:19:06,321 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=64.4 pTM=0.395 ipTM=0.181 tol=3.1
2024-07-11 17:19:20,883 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=64.7 pTM=0.395 ipTM=0.181 tol=2.21
2024-07-11 17:19:35,431 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=64.4 pTM=0.394 ipTM=0.18 tol=1.7
2024-07-11 17:19:49,989 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=64.6 pTM=0.39 ipTM=0.179 tol=1.18
2024-07-11 17:20:04,540 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=64.8 pTM=0.394 ipTM=0.18 tol=2.16
2024-07-11 17:20:19,066 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=65.1 pTM=0.396 ipTM=0.181 tol=1.53
2024-07-11 17:20:33,606 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=65.2 pTM=0.395 ipTM=0.18 tol=0.857
2024-07-11 17:20:48,143 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=64.8 pTM=0.39 ipTM=0.173 tol=0.907
2024-07-11 17:21:02,683 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=65 pTM=0.393 ipTM=0.174 tol=1.15
2024-07-11 17:21:17,233 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=64.9 pTM=0.391 ipTM=0.175 tol=1.32
2024-07-11 17:21:31,793 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=64.8 pTM=0.389 ipTM=0.176 tol=0.881
2024-07-11 17:21:46,350 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=64.6 pTM=0.386 ipTM=0.179 tol=0.961
2024-07-11 17:22:00,906 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=65 pTM=0.391 ipTM=0.184 tol=1.15
2024-07-11 17:22:15,466 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=64.6 pTM=0.388 ipTM=0.18 tol=1.38
2024-07-11 17:22:30,021 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=64.6 pTM=0.388 ipTM=0.178 tol=1.14
2024-07-11 17:22:44,580 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=64.6 pTM=0.386 ipTM=0.175 tol=1.59
2024-07-11 17:22:59,134 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=64.4 pTM=0.387 ipTM=0.181 tol=1.44
2024-07-11 17:23:13,691 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=64.3 pTM=0.381 ipTM=0.179 tol=1.7
2024-07-11 17:23:28,255 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=64.4 pTM=0.384 ipTM=0.177 tol=1.16
2024-07-11 17:23:42,810 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=64.2 pTM=0.384 ipTM=0.172 tol=1.03
2024-07-11 17:23:57,367 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=64.2 pTM=0.385 ipTM=0.172 tol=1.35
2024-07-11 17:24:11,923 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=64.1 pTM=0.384 ipTM=0.173 tol=1.05
2024-07-11 17:24:26,497 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=64.4 pTM=0.387 ipTM=0.174 tol=1.14
2024-07-11 17:24:41,052 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=63.9 pTM=0.385 ipTM=0.171 tol=2.18
2024-07-11 17:24:55,603 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=64.1 pTM=0.383 ipTM=0.171 tol=1.51
2024-07-11 17:25:10,162 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=64.2 pTM=0.384 ipTM=0.176 tol=1.65
2024-07-11 17:25:10,162 alphafold2_multimer_v3_model_3_seed_000 took 451.3s (30 recycles)
2024-07-11 17:25:25,221 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=58 pTM=0.359 ipTM=0.148
2024-07-11 17:25:39,814 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=63.2 pTM=0.38 ipTM=0.173 tol=18.6
2024-07-11 17:25:54,381 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=63.3 pTM=0.363 ipTM=0.162 tol=11.5
2024-07-11 17:26:08,960 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=63.9 pTM=0.365 ipTM=0.17 tol=4.72
2024-07-11 17:26:23,537 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=64.4 pTM=0.365 ipTM=0.201 tol=2.48
2024-07-11 17:26:38,110 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=65.2 pTM=0.384 ipTM=0.223 tol=2.22
2024-07-11 17:26:52,681 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=64.2 pTM=0.368 ipTM=0.205 tol=2.35
2024-07-11 17:27:07,263 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=65.6 pTM=0.388 ipTM=0.214 tol=2.32
2024-07-11 17:27:21,832 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=64.6 pTM=0.371 ipTM=0.191 tol=1.55
2024-07-11 17:27:36,413 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=65.1 pTM=0.384 ipTM=0.206 tol=1.59
2024-07-11 17:27:50,984 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=64.4 pTM=0.369 ipTM=0.191 tol=1.11
2024-07-11 17:28:05,565 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=65.6 pTM=0.385 ipTM=0.2 tol=1.31
2024-07-11 17:28:20,136 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=64.2 pTM=0.368 ipTM=0.182 tol=2.08
2024-07-11 17:28:34,718 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=65.2 pTM=0.383 ipTM=0.191 tol=2.19
2024-07-11 17:28:49,289 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=64.4 pTM=0.368 ipTM=0.182 tol=1.27
2024-07-11 17:29:03,867 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=65.4 pTM=0.384 ipTM=0.193 tol=1.93
2024-07-11 17:29:18,434 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=64.2 pTM=0.367 ipTM=0.178 tol=3.08
2024-07-11 17:29:32,999 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=65.2 pTM=0.383 ipTM=0.19 tol=2.99
2024-07-11 17:29:47,572 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=64.3 pTM=0.366 ipTM=0.184 tol=2.57
2024-07-11 17:30:02,153 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=65 pTM=0.381 ipTM=0.195 tol=2.32
2024-07-11 17:30:16,725 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=64.1 pTM=0.366 ipTM=0.179 tol=1.77
2024-07-11 17:30:31,305 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=65.1 pTM=0.382 ipTM=0.19 tol=1.9
2024-07-11 17:30:45,874 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=64.7 pTM=0.37 ipTM=0.186 tol=2.32
2024-07-11 17:31:00,456 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=65.4 pTM=0.382 ipTM=0.189 tol=2.26
2024-07-11 17:31:15,023 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=64.3 pTM=0.366 ipTM=0.168 tol=2.07
2024-07-11 17:31:29,603 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=65.9 pTM=0.39 ipTM=0.225 tol=1.96
2024-07-11 17:31:44,169 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=64.9 pTM=0.373 ipTM=0.194 tol=1.37
2024-07-11 17:31:58,757 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=65.4 pTM=0.385 ipTM=0.201 tol=1.79
2024-07-11 17:32:13,343 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=64.4 pTM=0.369 ipTM=0.187 tol=2.45
2024-07-11 17:32:27,920 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=65.4 pTM=0.385 ipTM=0.21 tol=2.64
2024-07-11 17:32:42,497 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=64.5 pTM=0.37 ipTM=0.182 tol=1.51
2024-07-11 17:32:42,498 alphafold2_multimer_v3_model_4_seed_000 took 451.9s (30 recycles)
2024-07-11 17:32:57,551 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=61 pTM=0.36 ipTM=0.161
2024-07-11 17:33:12,149 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=62.3 pTM=0.375 ipTM=0.175 tol=12.4
2024-07-11 17:33:26,724 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=62.5 pTM=0.384 ipTM=0.191 tol=5.37
2024-07-11 17:33:41,290 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=63.1 pTM=0.388 ipTM=0.206 tol=3.97
2024-07-11 17:33:55,841 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=63 pTM=0.386 ipTM=0.21 tol=2.08
2024-07-11 17:34:10,391 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=63.1 pTM=0.393 ipTM=0.212 tol=2.89
2024-07-11 17:34:24,941 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=63.3 pTM=0.394 ipTM=0.211 tol=1.76
2024-07-11 17:34:39,492 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=63.4 pTM=0.396 ipTM=0.216 tol=1.4
2024-07-11 17:34:54,049 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=63.2 pTM=0.392 ipTM=0.209 tol=1.43
2024-07-11 17:35:08,578 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=63.3 pTM=0.396 ipTM=0.208 tol=1.47
2024-07-11 17:35:23,110 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=63.5 pTM=0.396 ipTM=0.21 tol=1.55
2024-07-11 17:35:37,628 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=63.8 pTM=0.398 ipTM=0.213 tol=1.21
2024-07-11 17:35:52,159 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=63.6 pTM=0.396 ipTM=0.201 tol=2.1
2024-07-11 17:36:06,694 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=63.5 pTM=0.394 ipTM=0.199 tol=2.17
2024-07-11 17:36:21,227 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=63.6 pTM=0.393 ipTM=0.207 tol=1.99
2024-07-11 17:36:35,762 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=63.9 pTM=0.396 ipTM=0.211 tol=1.36
2024-07-11 17:36:50,302 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=63.4 pTM=0.392 ipTM=0.202 tol=2.06
2024-07-11 17:37:04,836 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=63.9 pTM=0.395 ipTM=0.22 tol=2.42
2024-07-11 17:37:19,370 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=63.4 pTM=0.393 ipTM=0.206 tol=1.36
2024-07-11 17:37:33,908 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=63.4 pTM=0.391 ipTM=0.2 tol=1.35
2024-07-11 17:37:48,444 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=63.3 pTM=0.391 ipTM=0.202 tol=1.32
2024-07-11 17:38:02,973 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=63.3 pTM=0.389 ipTM=0.204 tol=1.87
2024-07-11 17:38:17,506 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=64 pTM=0.395 ipTM=0.211 tol=1.77
2024-07-11 17:38:32,044 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=63.7 pTM=0.391 ipTM=0.206 tol=2.46
2024-07-11 17:38:46,583 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=63.5 pTM=0.391 ipTM=0.201 tol=1.78
2024-07-11 17:39:01,128 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=63.5 pTM=0.39 ipTM=0.202 tol=1.24
2024-07-11 17:39:15,680 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=63.3 pTM=0.39 ipTM=0.197 tol=2.33
2024-07-11 17:39:30,235 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=63.5 pTM=0.388 ipTM=0.201 tol=1.61
2024-07-11 17:39:44,770 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=63.8 pTM=0.393 ipTM=0.208 tol=2.28
2024-07-11 17:39:59,302 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=63.5 pTM=0.386 ipTM=0.209 tol=1.37
2024-07-11 17:40:13,839 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=63.8 pTM=0.393 ipTM=0.213 tol=4.35
2024-07-11 17:40:13,839 alphafold2_multimer_v3_model_5_seed_000 took 450.9s (30 recycles)
2024-07-11 17:40:14,280 reranking models by 'multimer' metric
2024-07-11 17:40:15,232 Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
2024-07-11 17:40:48,488 Relaxation took 34.2s
2024-07-11 17:40:48,488 rank_001_alphafold2_multimer_v3_model_1_seed_000 pLDDT=66.8 pTM=0.397 ipTM=0.221
2024-07-11 17:41:33,431 Relaxation took 44.9s
2024-07-11 17:41:33,432 rank_002_alphafold2_multimer_v3_model_5_seed_000 pLDDT=63.8 pTM=0.393 ipTM=0.213
2024-07-11 17:42:23,910 Relaxation took 50.5s
2024-07-11 17:42:23,910 rank_003_alphafold2_multimer_v3_model_2_seed_000 pLDDT=66.9 pTM=0.375 ipTM=0.207
2024-07-11 17:42:45,237 Relaxation took 21.3s
2024-07-11 17:42:45,237 rank_004_alphafold2_multimer_v3_model_4_seed_000 pLDDT=64.5 pTM=0.37 ipTM=0.182
2024-07-11 17:43:38,729 Relaxation took 53.5s
2024-07-11 17:43:38,729 rank_005_alphafold2_multimer_v3_model_3_seed_000 pLDDT=64.2 pTM=0.384 ipTM=0.176
2024-07-11 17:43:40,206 Done