2024-07-11 17:28:52,229 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3)
2024-07-11 17:28:59,145 Running on GPU
2024-07-11 17:29:15,566 Found 6 citations for tools or databases
2024-07-11 17:29:15,567 Query 1/1: NKD2_TVA92 (length 563)
2024-07-11 17:29:16,027 Sleeping for 7s. Reason: PENDING
2024-07-11 17:29:23,452 Sleeping for 9s. Reason: RUNNING
2024-07-11 17:29:32,863 Sleeping for 9s. Reason: RUNNING
2024-07-11 17:29:42,263 Sleeping for 7s. Reason: RUNNING
2024-07-11 17:29:49,658 Sleeping for 7s. Reason: RUNNING
2024-07-11 17:29:57,116 Sleeping for 9s. Reason: RUNNING
2024-07-11 17:30:06,515 Sleeping for 7s. Reason: RUNNING
2024-07-11 17:30:15,487 Sleeping for 5s. Reason: PENDING
2024-07-11 17:30:20,888 Sleeping for 7s. Reason: RUNNING
2024-07-11 17:30:28,315 Sleeping for 6s. Reason: RUNNING
2024-07-11 17:30:41,939 Setting max_seq=508, max_extra_seq=2048
2024-07-11 17:35:22,267 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=32.3 pTM=0.293 ipTM=0.522
2024-07-11 17:35:31,206 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=32.6 pTM=0.276 ipTM=0.386 tol=16.4
2024-07-11 17:35:40,140 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=32.8 pTM=0.275 ipTM=0.26 tol=10.1
2024-07-11 17:35:49,076 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=32.5 pTM=0.269 ipTM=0.231 tol=6.86
2024-07-11 17:35:58,013 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=33 pTM=0.272 ipTM=0.243 tol=8.41
2024-07-11 17:36:06,945 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=33.3 pTM=0.287 ipTM=0.497 tol=12.8
2024-07-11 17:36:15,879 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=33 pTM=0.279 ipTM=0.305 tol=4.42
2024-07-11 17:36:24,817 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=34 pTM=0.286 ipTM=0.522 tol=2.82
2024-07-11 17:36:33,756 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=33.6 pTM=0.281 ipTM=0.343 tol=6.26
2024-07-11 17:36:42,694 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=34.2 pTM=0.285 ipTM=0.524 tol=11.1
2024-07-11 17:36:51,628 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=32.8 pTM=0.275 ipTM=0.317 tol=8.09
2024-07-11 17:37:00,565 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=33.8 pTM=0.279 ipTM=0.514 tol=9.9
2024-07-11 17:37:09,504 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=32.5 pTM=0.269 ipTM=0.247 tol=3.91
2024-07-11 17:37:18,452 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=33 pTM=0.277 ipTM=0.349 tol=9.05
2024-07-11 17:37:27,397 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=33.6 pTM=0.275 ipTM=0.314 tol=6.64
2024-07-11 17:37:36,338 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=33.4 pTM=0.276 ipTM=0.32 tol=8.59
2024-07-11 17:37:45,278 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=33.5 pTM=0.275 ipTM=0.242 tol=5.08
2024-07-11 17:37:54,217 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=34.2 pTM=0.281 ipTM=0.314 tol=12.4
2024-07-11 17:38:03,158 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=33.5 pTM=0.277 ipTM=0.265 tol=7.09
2024-07-11 17:38:12,098 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=34.2 pTM=0.277 ipTM=0.26 tol=6.25
2024-07-11 17:38:21,035 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=33.8 pTM=0.277 ipTM=0.261 tol=4.7
2024-07-11 17:38:29,971 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=34 pTM=0.281 ipTM=0.345 tol=3.28
2024-07-11 17:38:38,909 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=34 pTM=0.289 ipTM=0.493 tol=8.96
2024-07-11 17:38:47,854 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=34.1 pTM=0.29 ipTM=0.375 tol=9.31
2024-07-11 17:38:56,804 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=34.4 pTM=0.286 ipTM=0.364 tol=8.09
2024-07-11 17:39:05,746 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=34.6 pTM=0.29 ipTM=0.467 tol=11.1
2024-07-11 17:39:14,681 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=33.6 pTM=0.281 ipTM=0.293 tol=4.44
2024-07-11 17:39:23,625 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=35.1 pTM=0.291 ipTM=0.478 tol=5.79
2024-07-11 17:39:32,558 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=34.1 pTM=0.285 ipTM=0.291 tol=2.4
2024-07-11 17:39:41,500 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=34.5 pTM=0.283 ipTM=0.431 tol=5.57
2024-07-11 17:39:50,447 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=33.9 pTM=0.287 ipTM=0.449 tol=10.8
2024-07-11 17:39:50,447 alphafold2_multimer_v3_model_1_seed_000 took 499.6s (30 recycles)
2024-07-11 17:39:59,676 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=30.7 pTM=0.278 ipTM=0.215
2024-07-11 17:40:08,610 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=31.2 pTM=0.267 ipTM=0.184 tol=20.7
2024-07-11 17:40:17,539 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=31.2 pTM=0.271 ipTM=0.226 tol=9.39
2024-07-11 17:40:26,470 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=31.3 pTM=0.273 ipTM=0.237 tol=8.23
2024-07-11 17:40:35,411 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=31.3 pTM=0.274 ipTM=0.243 tol=8.01
2024-07-11 17:40:44,352 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=31.7 pTM=0.272 ipTM=0.247 tol=5.96
2024-07-11 17:40:53,293 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=31.9 pTM=0.271 ipTM=0.243 tol=4.02
2024-07-11 17:41:02,235 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=31.9 pTM=0.273 ipTM=0.244 tol=8.93
2024-07-11 17:41:11,176 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=31.9 pTM=0.279 ipTM=0.311 tol=10.8
2024-07-11 17:41:20,118 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=32.4 pTM=0.273 ipTM=0.244 tol=7.51
2024-07-11 17:41:29,054 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=31.8 pTM=0.272 ipTM=0.241 tol=5.61
2024-07-11 17:41:37,993 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=32.3 pTM=0.272 ipTM=0.245 tol=5.35
2024-07-11 17:41:46,932 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=32.2 pTM=0.273 ipTM=0.236 tol=4.6
2024-07-11 17:41:55,872 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=32.2 pTM=0.274 ipTM=0.247 tol=3.55
2024-07-11 17:42:04,817 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=32 pTM=0.277 ipTM=0.291 tol=4.89
2024-07-11 17:42:13,755 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=32.2 pTM=0.273 ipTM=0.242 tol=5.26
2024-07-11 17:42:22,699 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=32.6 pTM=0.276 ipTM=0.271 tol=7.36
2024-07-11 17:42:31,647 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=32 pTM=0.272 ipTM=0.247 tol=3.96
2024-07-11 17:42:40,589 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=32.3 pTM=0.277 ipTM=0.271 tol=5.3
2024-07-11 17:42:49,533 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=31.9 pTM=0.272 ipTM=0.27 tol=4.14
2024-07-11 17:42:58,475 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=32.6 pTM=0.276 ipTM=0.275 tol=5.62
2024-07-11 17:43:07,416 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=33 pTM=0.275 ipTM=0.283 tol=4.96
2024-07-11 17:43:16,358 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=32.9 pTM=0.277 ipTM=0.293 tol=5.57
2024-07-11 17:43:25,300 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=33 pTM=0.28 ipTM=0.307 tol=5.04
2024-07-11 17:43:34,238 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=32.9 pTM=0.28 ipTM=0.291 tol=3.8
2024-07-11 17:43:43,176 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=32.5 pTM=0.276 ipTM=0.283 tol=2.58
2024-07-11 17:43:52,118 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=32.8 pTM=0.279 ipTM=0.29 tol=5.22
2024-07-11 17:44:01,056 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=32.8 pTM=0.281 ipTM=0.289 tol=4.68
2024-07-11 17:44:09,992 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=32.8 pTM=0.277 ipTM=0.276 tol=4.89
2024-07-11 17:44:18,934 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=32.6 pTM=0.284 ipTM=0.479 tol=7.95
2024-07-11 17:44:27,871 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=32.4 pTM=0.283 ipTM=0.335 tol=4.05
2024-07-11 17:44:27,871 alphafold2_multimer_v3_model_2_seed_000 took 277.1s (30 recycles)
2024-07-11 17:44:37,151 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=32.1 pTM=0.269 ipTM=0.212
2024-07-11 17:44:46,144 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=31.9 pTM=0.273 ipTM=0.227 tol=16.5
2024-07-11 17:44:55,132 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=32.8 pTM=0.267 ipTM=0.211 tol=14.3
2024-07-11 17:45:04,108 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=32.8 pTM=0.272 ipTM=0.213 tol=13.7
2024-07-11 17:45:13,084 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=33.2 pTM=0.272 ipTM=0.251 tol=13.3
2024-07-11 17:45:22,075 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=33.2 pTM=0.269 ipTM=0.239 tol=7.4
2024-07-11 17:45:31,065 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=33 pTM=0.269 ipTM=0.249 tol=9.11
2024-07-11 17:45:40,055 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=33.1 pTM=0.269 ipTM=0.24 tol=9.17
2024-07-11 17:45:49,039 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=32.8 pTM=0.269 ipTM=0.26 tol=6.03
2024-07-11 17:45:58,046 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=34.2 pTM=0.28 ipTM=0.309 tol=9.92
2024-07-11 17:46:07,038 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=33.6 pTM=0.269 ipTM=0.254 tol=6.81
2024-07-11 17:46:16,031 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=33 pTM=0.277 ipTM=0.284 tol=6.48
2024-07-11 17:46:25,032 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=33.8 pTM=0.277 ipTM=0.276 tol=7.4
2024-07-11 17:46:34,032 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=34.4 pTM=0.288 ipTM=0.317 tol=7.91
2024-07-11 17:46:43,037 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=33.5 pTM=0.274 ipTM=0.253 tol=10.5
2024-07-11 17:46:52,049 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=33.9 pTM=0.278 ipTM=0.306 tol=8.08
2024-07-11 17:47:01,045 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=33.9 pTM=0.277 ipTM=0.276 tol=6.3
2024-07-11 17:47:10,049 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=34.3 pTM=0.282 ipTM=0.299 tol=3.88
2024-07-11 17:47:19,045 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=34.4 pTM=0.279 ipTM=0.282 tol=4.87
2024-07-11 17:47:28,056 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=33.6 pTM=0.271 ipTM=0.26 tol=7.54
2024-07-11 17:47:37,053 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=34.4 pTM=0.281 ipTM=0.318 tol=6.35
2024-07-11 17:47:46,047 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=33.8 pTM=0.276 ipTM=0.252 tol=4.26
2024-07-11 17:47:55,051 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=33.1 pTM=0.272 ipTM=0.26 tol=6.56
2024-07-11 17:48:04,059 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=33.2 pTM=0.272 ipTM=0.29 tol=5.04
2024-07-11 17:48:13,073 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=33.8 pTM=0.271 ipTM=0.241 tol=6.36
2024-07-11 17:48:22,086 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=33.7 pTM=0.269 ipTM=0.244 tol=5.56
2024-07-11 17:48:31,083 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=33.8 pTM=0.281 ipTM=0.334 tol=10.6
2024-07-11 17:48:40,080 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=33.4 pTM=0.275 ipTM=0.256 tol=3.56
2024-07-11 17:48:49,078 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=33.6 pTM=0.28 ipTM=0.311 tol=3.83
2024-07-11 17:48:58,071 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=33.5 pTM=0.279 ipTM=0.28 tol=4.84
2024-07-11 17:49:07,079 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=33.4 pTM=0.278 ipTM=0.309 tol=5.79
2024-07-11 17:49:07,079 alphafold2_multimer_v3_model_3_seed_000 took 278.9s (30 recycles)
2024-07-11 17:49:16,344 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=32.5 pTM=0.293 ipTM=0.469
2024-07-11 17:49:25,304 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=33.7 pTM=0.299 ipTM=0.539 tol=18.7
2024-07-11 17:49:34,267 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=33.2 pTM=0.282 ipTM=0.297 tol=13.8
2024-07-11 17:49:43,222 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=32.9 pTM=0.278 ipTM=0.236 tol=9.32
2024-07-11 17:49:52,180 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=33 pTM=0.281 ipTM=0.278 tol=4.5
2024-07-11 17:50:01,142 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=33.1 pTM=0.276 ipTM=0.228 tol=5.84
2024-07-11 17:50:10,103 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=32.9 pTM=0.275 ipTM=0.221 tol=6.61
2024-07-11 17:50:19,063 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=32.8 pTM=0.28 ipTM=0.253 tol=3.93
2024-07-11 17:50:28,018 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=33.8 pTM=0.291 ipTM=0.442 tol=8.04
2024-07-11 17:50:36,980 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=33.1 pTM=0.281 ipTM=0.323 tol=5.79
2024-07-11 17:50:45,946 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=33.5 pTM=0.286 ipTM=0.456 tol=5.96
2024-07-11 17:50:54,910 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=32.7 pTM=0.277 ipTM=0.263 tol=5.62
2024-07-11 17:51:03,883 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=32.8 pTM=0.275 ipTM=0.228 tol=4.59
2024-07-11 17:51:12,857 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=33 pTM=0.276 ipTM=0.252 tol=4.54
2024-07-11 17:51:21,828 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=32.8 pTM=0.279 ipTM=0.259 tol=4.68
2024-07-11 17:51:30,803 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=32.9 pTM=0.272 ipTM=0.236 tol=8.47
2024-07-11 17:51:39,778 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=33.5 pTM=0.271 ipTM=0.22 tol=12.5
2024-07-11 17:51:48,756 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=34.3 pTM=0.281 ipTM=0.378 tol=10.5
2024-07-11 17:51:57,734 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=34.2 pTM=0.272 ipTM=0.224 tol=9.5
2024-07-11 17:52:06,710 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=34.3 pTM=0.28 ipTM=0.322 tol=6.46
2024-07-11 17:52:15,684 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=33.9 pTM=0.275 ipTM=0.239 tol=10.1
2024-07-11 17:52:24,655 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=34.2 pTM=0.284 ipTM=0.327 tol=8.36
2024-07-11 17:52:33,626 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=34 pTM=0.271 ipTM=0.23 tol=7.53
2024-07-11 17:52:42,601 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=34.2 pTM=0.278 ipTM=0.245 tol=8.92
2024-07-11 17:52:51,577 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=34.2 pTM=0.275 ipTM=0.308 tol=8.58
2024-07-11 17:53:00,552 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=34.2 pTM=0.275 ipTM=0.264 tol=9.34
2024-07-11 17:53:09,517 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=34.4 pTM=0.279 ipTM=0.275 tol=8.62
2024-07-11 17:53:18,485 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=34.2 pTM=0.274 ipTM=0.219 tol=10.4
2024-07-11 17:53:27,453 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=34.4 pTM=0.28 ipTM=0.243 tol=6.89
2024-07-11 17:53:36,429 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=34 pTM=0.271 ipTM=0.238 tol=8.91
2024-07-11 17:53:45,399 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=34.2 pTM=0.28 ipTM=0.261 tol=6.01
2024-07-11 17:53:45,399 alphafold2_multimer_v3_model_4_seed_000 took 278.0s (30 recycles)
2024-07-11 17:53:54,743 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=36.1 pTM=0.281 ipTM=0.734
2024-07-11 17:54:03,764 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=34.2 pTM=0.271 ipTM=0.36 tol=15.9
2024-07-11 17:54:12,803 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=34.5 pTM=0.27 ipTM=0.238 tol=13.4
2024-07-11 17:54:21,846 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=34.4 pTM=0.266 ipTM=0.227 tol=11.8
2024-07-11 17:54:30,881 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=34.2 pTM=0.269 ipTM=0.242 tol=9.18
2024-07-11 17:54:39,916 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=34.6 pTM=0.272 ipTM=0.259 tol=7.96
2024-07-11 17:54:48,946 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=34.1 pTM=0.27 ipTM=0.231 tol=9.75
2024-07-11 17:54:57,981 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=34.7 pTM=0.278 ipTM=0.264 tol=10.1
2024-07-11 17:55:07,015 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=33.7 pTM=0.27 ipTM=0.235 tol=5.36
2024-07-11 17:55:16,046 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=34.7 pTM=0.277 ipTM=0.265 tol=5.79
2024-07-11 17:55:25,073 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=34.1 pTM=0.272 ipTM=0.254 tol=11.1
2024-07-11 17:55:34,105 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=34.5 pTM=0.275 ipTM=0.276 tol=9.02
2024-07-11 17:55:43,135 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=33.8 pTM=0.273 ipTM=0.25 tol=13
2024-07-11 17:55:52,162 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=35 pTM=0.277 ipTM=0.269 tol=8
2024-07-11 17:56:01,187 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=35 pTM=0.275 ipTM=0.253 tol=6.39
2024-07-11 17:56:10,208 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=34.4 pTM=0.278 ipTM=0.265 tol=5.84
2024-07-11 17:56:19,229 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=34.9 pTM=0.279 ipTM=0.292 tol=7.74
2024-07-11 17:56:28,259 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=34.4 pTM=0.274 ipTM=0.244 tol=6.34
2024-07-11 17:56:37,289 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=34.9 pTM=0.276 ipTM=0.275 tol=3.56
2024-07-11 17:56:46,317 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=34.3 pTM=0.276 ipTM=0.247 tol=9.72
2024-07-11 17:56:55,338 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=34.3 pTM=0.278 ipTM=0.275 tol=7.81
2024-07-11 17:57:04,371 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=34.2 pTM=0.274 ipTM=0.248 tol=17.7
2024-07-11 17:57:13,395 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=34.7 pTM=0.276 ipTM=0.272 tol=8.52
2024-07-11 17:57:22,419 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=33.9 pTM=0.274 ipTM=0.246 tol=5.49
2024-07-11 17:57:31,450 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=34.9 pTM=0.277 ipTM=0.277 tol=10.2
2024-07-11 17:57:40,470 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=34.5 pTM=0.276 ipTM=0.254 tol=11.1
2024-07-11 17:57:49,492 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=34.5 pTM=0.279 ipTM=0.272 tol=9.63
2024-07-11 17:57:58,508 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=34.3 pTM=0.276 ipTM=0.257 tol=4.31
2024-07-11 17:58:07,528 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=34.9 pTM=0.277 ipTM=0.267 tol=6.68
2024-07-11 17:58:16,554 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=34.6 pTM=0.276 ipTM=0.263 tol=4.79
2024-07-11 17:58:25,580 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=35.1 pTM=0.281 ipTM=0.293 tol=9.85
2024-07-11 17:58:25,581 alphafold2_multimer_v3_model_5_seed_000 took 279.9s (30 recycles)
2024-07-11 17:58:25,888 reranking models by 'multimer' metric
2024-07-11 17:58:49,629 Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
2024-07-11 18:00:04,691 Relaxation took 98.8s
2024-07-11 18:00:04,691 rank_001_alphafold2_multimer_v3_model_1_seed_000 pLDDT=33.9 pTM=0.287 ipTM=0.449
2024-07-11 18:01:13,869 Relaxation took 69.2s
2024-07-11 18:01:13,869 rank_002_alphafold2_multimer_v3_model_2_seed_000 pLDDT=32.4 pTM=0.283 ipTM=0.335
2024-07-11 18:02:18,867 Relaxation took 65.0s
2024-07-11 18:02:18,867 rank_003_alphafold2_multimer_v3_model_3_seed_000 pLDDT=33.4 pTM=0.278 ipTM=0.309
2024-07-11 18:03:13,187 Relaxation took 54.3s
2024-07-11 18:03:13,188 rank_004_alphafold2_multimer_v3_model_5_seed_000 pLDDT=35.1 pTM=0.281 ipTM=0.293
2024-07-11 18:04:27,288 Relaxation took 74.1s
2024-07-11 18:04:27,288 rank_005_alphafold2_multimer_v3_model_4_seed_000 pLDDT=34.2 pTM=0.28 ipTM=0.261
2024-07-11 18:04:28,683 Done